Miyakogusa Predicted Gene

Lj4g3v0473310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0473310.1 Non Chatacterized Hit- tr|B7FME8|B7FME8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.26,0,seg,NULL; Di19,Drought induced 19/ RING finger protein 114;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAM,CUFF.47356.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05700.1 | Symbols:  | Drought-responsive family protein | ch...   142   2e-34
AT5G26990.1 | Symbols:  | Drought-responsive family protein | ch...   125   4e-29
AT3G06760.1 | Symbols:  | Drought-responsive family protein | ch...   121   4e-28
AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein ...   112   2e-25
AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 | chr1:...    97   9e-21
AT1G56280.2 | Symbols:  | drought-induced 19 | chr1:21073366-210...    94   9e-20
AT4G02200.1 | Symbols:  | Drought-responsive family protein | ch...    80   1e-15
AT4G02200.2 | Symbols:  | Drought-responsive family protein | ch...    75   4e-14
AT3G06760.2 | Symbols:  | Drought-responsive family protein | ch...    75   4e-14
AT4G02200.3 | Symbols:  | Drought-responsive family protein | ch...    74   1e-13
AT1G02750.1 | Symbols:  | Drought-responsive family protein | ch...    65   4e-11
AT1G02750.2 | Symbols:  | Drought-responsive family protein | ch...    55   5e-08

>AT3G05700.1 | Symbols:  | Drought-responsive family protein |
           chr3:1682432-1684323 REVERSE LENGTH=223
          Length = 223

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 135/233 (57%), Gaps = 12/233 (5%)

Query: 1   MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGVDDFDVEEEVRPDFPCPYCYEDFDIASL 60
           MDSD W+ RLA+A R+Y L    PS     LG ++ D EEE R +F CP+C + FDI SL
Sbjct: 1   MDSDSWSDRLASATRRYQLAF--PSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSL 58

Query: 61  CSHLEDEHSCESRVTICPICSVKVARDMLSHITLQHGHLFKIQXXXXXXXVAIPNSQTLS 120
           C H++++H  E++  +CP+C+V+V  DM++HITLQH ++FK+            +  TLS
Sbjct: 59  CCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTLS 116

Query: 121 LLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAATDPFLSSFMLNFPACEAEEISKSVVSS 180
           +L R+  + + Q L GGS     S   + SN A DP LSSF+   P  +    ++S +S+
Sbjct: 117 ILRREFPDGNFQSLFGGSSCIVSSS--SSSNVAADPLLSSFIS--PIADGFFTTESCISA 172

Query: 181 AEDSAAKSTAPAHIWKSSFDPSLSIEEREKRIRQAAGRSGFVQDLFLSTLFND 233
                 K+T      +++   SLS E+ +++++    RS FV++L  ST+ +D
Sbjct: 173 ETGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLK----RSEFVRELLSSTILDD 221


>AT5G26990.1 | Symbols:  | Drought-responsive family protein |
           chr5:9491366-9493639 FORWARD LENGTH=222
          Length = 222

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 131/233 (56%), Gaps = 13/233 (5%)

Query: 1   MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGVDDFDVEEEVRPDFPCPYCYEDFDIASL 60
           MDSD W+ RLA+A R+Y L     S +   LG ++ + E++ R ++ CP+C + FDI SL
Sbjct: 1   MDSDSWSDRLASASRRYQLDFLSRSDNF--LGFEEIEGEDDFREEYACPFCSDYFDIVSL 58

Query: 61  CSHLEDEHSCESRVTICPICSVKVARDMLSHITLQHGHLFKIQXXXXXXXVAIPNSQTLS 120
           C H++++H  +++  +CPIC+VKV+ DM++HITLQH ++FK+            +   LS
Sbjct: 59  CCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQS--MLS 116

Query: 121 LLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAATDPFLSSFMLNFPACEAEEISKSVVSS 180
           +L R+  + + Q L  G+     S   + ++ A DP LSSF+   P  +   IS+S + +
Sbjct: 117 ILKREFPDGNFQSLFEGTSRAVSS---SSASIAADPLLSSFIS--PMADDFFISESSLCA 171

Query: 181 AEDSAAKSTAPAHIWKSSFDPSLSIEEREKRIRQAAGRSGFVQDLFLSTLFND 233
              SA K+   +   ++    SLS E+  ++++Q    S FVQ +  S +  D
Sbjct: 172 DTSSAKKTLNQSLPERNVEKQSLSAEDHREKLKQ----SEFVQGILSSMILED 220


>AT3G06760.1 | Symbols:  | Drought-responsive family protein |
           chr3:2132971-2134355 FORWARD LENGTH=224
          Length = 224

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 12/202 (5%)

Query: 32  GVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSH 91
           G +D + E++++ +F CP+C EDFDI  LC H+++EH  E++  +CP+C+ +V  D++ H
Sbjct: 33  GYEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGH 92

Query: 92  ITLQHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVSN 151
           IT QH + FK+Q            S T   L ++LREA+LQ LL     G  S   + +N
Sbjct: 93  ITTQHANFFKVQRRRRLRRGGY--SSTYLALKKELREANLQSLL-----GGSSSFTSSTN 145

Query: 152 AATDPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSSFDPSLSIEEREKR 211
             +DP LSSFM N P+        +   +  ++A K +    + +   +  LS E++EK 
Sbjct: 146 IDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEK- 204

Query: 212 IRQAAGRSGFVQDLFLSTLFND 233
               A +S FV+ L LST+  D
Sbjct: 205 ----AKKSEFVRGLLLSTMLED 222


>AT5G49230.1 | Symbols: HRB1 | Drought-responsive family protein |
           chr5:19959048-19960422 REVERSE LENGTH=211
          Length = 211

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 21/203 (10%)

Query: 31  LGVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLS 90
           L + D + E++++ +F CP+C ++FDI  LC H++  H  E++  +CP+C+ KV  D++ 
Sbjct: 28  LYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVG 87

Query: 91  HITLQHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVS 150
           HIT QHG++FK+Q            S T   L ++LREA+LQ  LGGS     S     S
Sbjct: 88  HITTQHGNVFKVQRRRRLRKGGY--SSTYLTLKKELREANLQS-LGGSSTFIPS-----S 139

Query: 151 NAATDPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSSFDPSLSIEEREK 210
           N  +DP LSSFM   P+     I  +   S    + K T+ + I + SF    S E++EK
Sbjct: 140 NIDSDPLLSSFMFKPPSA----IPITEGDSVAQVSPKDTSKSKIQQESF----SNEDQEK 191

Query: 211 RIRQAAGRSGFVQDLFLSTLFND 233
                A +S FV+ L  ST+  D
Sbjct: 192 -----AKKSKFVRGLLWSTMLED 209


>AT1G56280.1 | Symbols: ATDI19, DI19 | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=200
          Length = 200

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 29/206 (14%)

Query: 31  LGVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLS 90
           +G ++ D +++ + +F CP+C E +DI  LC H++DEH+ ES+  +CP+CS+KV  D+++
Sbjct: 20  MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVA 79

Query: 91  HITLQHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVS 150
           H     G   K +            + TLSLL ++LRE  LQ LLG +     S   +V+
Sbjct: 80  HKRFTMGRKRKSRKSG--------TNSTLSLLRKELREGDLQRLLGFT-----SRNGSVA 126

Query: 151 NAAT-DPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSS--FDPSLSIEE 207
           ++ T DP LSSF+           ++S  S A       +    I +    F   +S+++
Sbjct: 127 SSVTPDPLLSSFI---------SPTRSQSSPAPRQTKNVSEDKQIERKRQVFISPVSLKD 177

Query: 208 REKRIRQAAGRSGFVQDLFLSTLFND 233
           RE+R      +S FVQ L  S +F++
Sbjct: 178 REER----RHKSEFVQRLLSSAIFDE 199


>AT1G56280.2 | Symbols:  | drought-induced 19 |
           chr1:21073366-21074725 REVERSE LENGTH=199
          Length = 199

 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 30/206 (14%)

Query: 31  LGVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLS 90
           +G ++ D +++ + +F CP+C E +DI  LC H++DEH+ ES+  +CP+CS+KV  D+++
Sbjct: 20  MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESK-NVCPVCSLKVGVDIVA 78

Query: 91  HITLQHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVS 150
           H     G   K +            + TLSLL ++LRE  LQ LLG +     S   +V+
Sbjct: 79  HKRFTMGRKRKSRKSG--------TNSTLSLLRKELREGDLQRLLGFT-----SRNGSVA 125

Query: 151 NAAT-DPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSS--FDPSLSIEE 207
           ++ T DP LSSF+           ++S  S A       +    I +    F   +S+++
Sbjct: 126 SSVTPDPLLSSFI---------SPTRSQSSPAPRQTKNVSEDKQIERKRQVFISPVSLKD 176

Query: 208 REKRIRQAAGRSGFVQDLFLSTLFND 233
           RE+R      +S FVQ L  S +F++
Sbjct: 177 REER----RHKSEFVQRLLSSAIFDE 198


>AT4G02200.1 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=214
          Length = 214

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 28/202 (13%)

Query: 35  DFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITL 94
           +F+ ++E+  D+PCP+C +D+D+  LC H+++EH  ++   ICP+CS +V   M+ HIT 
Sbjct: 32  EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91

Query: 95  QHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAAT 154
           QH  +FK            P ++            +LQ L+    + + +     S +  
Sbjct: 92  QHRDVFKRLYKDESYSAFSPGTR-----------KYLQSLIDEPLSTNHT-----SKSVL 135

Query: 155 DPFLSSFMLNFPACEAEEISK---SVVSSAEDSAAKSTAPAHIWKSSFDPS-LSIEEREK 210
           DP L SF+ N P+ +  ++ +   S  +S ED++    +    W+S   PS LS  E   
Sbjct: 136 DPLL-SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES---PSPLSDTE--- 188

Query: 211 RIRQAAGRSGFVQDLFLSTLFN 232
            + + A +  FVQ L  S +F+
Sbjct: 189 -LLEKAKKREFVQGLISSAIFD 209


>AT4G02200.2 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974332 FORWARD LENGTH=207
          Length = 207

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 28/193 (14%)

Query: 35  DFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITL 94
           +F+ ++E+  D+PCP+C +D+D+  LC H+++EH  ++   ICP+CS +V   M+ HIT 
Sbjct: 32  EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91

Query: 95  QHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAAT 154
           QH  +FK            P ++            +LQ L+    + + +     S +  
Sbjct: 92  QHRDVFKRLYKDESYSAFSPGTR-----------KYLQSLIDEPLSTNHT-----SKSVL 135

Query: 155 DPFLSSFMLNFPACEAEEISK---SVVSSAEDSAAKSTAPAHIWKSSFDPS-LSIEEREK 210
           DP L SF+ N P+ +  ++ +   S  +S ED++    +    W+S   PS LS  E   
Sbjct: 136 DPLL-SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES---PSPLSDTE--- 188

Query: 211 RIRQAAGRSGFVQ 223
            + + A +  FVQ
Sbjct: 189 -LLEKAKKREFVQ 200


>AT3G06760.2 | Symbols:  | Drought-responsive family protein |
           chr3:2132971-2134355 FORWARD LENGTH=234
          Length = 234

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 32  GVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVAR----- 86
           G +D + E++++ +F CP+C EDFDI  LC H+++EH  E++  +    ++ V +     
Sbjct: 33  GYEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVDQFFALVVIQCCNFW 92

Query: 87  DMLSHITLQHGHLFK---IQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHR 143
            +     L    LF    +             S T   L ++LREA+LQ LLG       
Sbjct: 93  FIPCESNLGIFRLFGRSVLYALRGRRLRRGGYSSTYLALKKELREANLQSLLG-----GS 147

Query: 144 SYRDTVSNAATDPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSSFDPSL 203
           S   + +N  +DP LSSFM N P+        +   +  ++A K +    + +   +  L
Sbjct: 148 SSFTSSTNIDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPL 207

Query: 204 SIEEREKRIRQAAGRSGFVQDLFLSTLFND 233
           S E++EK     A +S FV+ L LST+  D
Sbjct: 208 SGEDQEK-----AKKSEFVRGLLLSTMLED 232


>AT4G02200.3 | Symbols:  | Drought-responsive family protein |
           chr4:972776-974203 FORWARD LENGTH=228
          Length = 228

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 42/216 (19%)

Query: 35  DFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEH-------------SCESRV-TICPIC 80
           +F+ ++E+  D+PCP+C +D+D+  LC H+++EH             SC+ R+  ICP+C
Sbjct: 32  EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGFLHEAVSCKFRLFIICPVC 91

Query: 81  SVKVARDMLSHITLQHGHLFKIQXXXXXXXVAIPNSQTLSLLGRDLREAHLQVLLGGSGA 140
           S +V   M+ HIT QH  +FK            P ++            +LQ L+    +
Sbjct: 92  SRRVKMHMVDHITTQHRDVFKRLYKDESYSAFSPGTR-----------KYLQSLIDEPLS 140

Query: 141 GHRSYRDTVSNAATDPFLSSFMLNFPACEAEEISK---SVVSSAEDSAAKSTAPAHIWKS 197
            + +     S +  DP L SF+ N P+ +  ++ +   S  +S ED++    +    W+S
Sbjct: 141 TNHT-----SKSVLDPLL-SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES 194

Query: 198 SFDPS-LSIEEREKRIRQAAGRSGFVQDLFLSTLFN 232
              PS LS  E    + + A +  FVQ L  S +F+
Sbjct: 195 ---PSPLSDTE----LLEKAKKREFVQGLISSAIFD 223


>AT1G02750.1 | Symbols:  | Drought-responsive family protein |
           chr1:602673-604134 FORWARD LENGTH=221
          Length = 221

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 43/65 (66%)

Query: 37  DVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITLQH 96
           +V++++  ++PCP+C  D+D+  LC H+++EH  E+   ICP+CS +V   M+ HIT  H
Sbjct: 38  EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHH 97

Query: 97  GHLFK 101
             + K
Sbjct: 98  RDVLK 102


>AT1G02750.2 | Symbols:  | Drought-responsive family protein |
          chr1:602673-604134 FORWARD LENGTH=205
          Length = 205

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 36/52 (69%)

Query: 37 DVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDM 88
          +V++++  ++PCP+C  D+D+  LC H+++EH  E+   ICP+CS +V   M
Sbjct: 38 EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHM 89