Miyakogusa Predicted Gene

Lj4g3v0462780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0462780.1 Non Chatacterized Hit- tr|K4DH67|K4DH67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.48,4e-18,DUF1764,Protein of unknown function DUF1764,
eukaryotic; seg,NULL,CUFF.47314.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11760.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...    45   7e-06

>AT5G11760.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1764,
           eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:3789754-3790299 FORWARD LENGTH=181
          Length = 181

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 22/40 (55%)

Query: 82  SRPRKKTXXXXXXXXXXXXXXNKQDAGGTPLCPFDCSCCF 121
           SRPRK T              N++DAGGT  CPFDC CCF
Sbjct: 142 SRPRKTTEDGLRVFTENEIGFNRKDAGGTRFCPFDCYCCF 181