Miyakogusa Predicted Gene

Lj4g3v0462580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0462580.1 Non Chatacterized Hit- tr|I1IGN1|I1IGN1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,51.49,2e-19,seg,NULL,CUFF.47297.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G28250.1 | Symbols:  | unknown protein; Has 22 Blast hits to ...    65   6e-12

>AT1G28250.1 | Symbols:  | unknown protein; Has 22 Blast hits to 22
           proteins in 10 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:9874296-9875175 FORWARD LENGTH=102
          Length = 102

 Score = 65.5 bits (158), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 45/97 (46%)

Query: 15  DVSSAQAVLLGALAPGVNGPTWIXXXXXXXXXXXXXXXXXXXXXXXXDSWLVLHVGXXXX 74
            +SS +AV LGALAPGVNGPTW                          S L++HVG    
Sbjct: 6   QISSTEAVFLGALAPGVNGPTWNTLRFAFLLLGLCLAFMLSVAFTSGQSMLLVHVGFLIV 65

Query: 75  XXXXXXXXXSWFLAETGLVSIEHQMCEMGLQQKDNPE 111
                    +WFLA+TGLV +E QM E+ L   D  +
Sbjct: 66  IASTLFILLNWFLAQTGLVQVETQMQELNLLPNDKTK 102