Miyakogusa Predicted Gene

Lj4g3v0451300.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0451300.2 Non Chatacterized Hit- tr|I1M0A6|I1M0A6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,89.35,0,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; GTP-BINDING PROTEIN ,CUFF.47271.2
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22870.1 | Symbols: EMB2001 | P-loop containing nucleoside tr...   398   e-111
AT5G11480.1 | Symbols:  | P-loop containing nucleoside triphosph...   273   5e-74
AT5G58370.2 | Symbols:  | P-loop containing nucleoside triphosph...   105   2e-23
AT5G58370.1 | Symbols:  | P-loop containing nucleoside triphosph...   100   9e-22

>AT2G22870.1 | Symbols: EMB2001 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr2:9739476-9740921 FORWARD LENGTH=300
          Length = 300

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/217 (83%), Positives = 206/217 (94%)

Query: 1   MILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLV 60
           M+LP SNIV+GP+AG S+IK+VEFVKSS RARDCPKDDRPE A+LGRSNVGKSSLIN LV
Sbjct: 82  MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLV 141

Query: 61  RKKELALTSKRPGKTQLINHFLVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRN 120
           RKKE+ALTSK+PGKTQLINHFLVNKSWY+VDLPGYGFAK S+AAKTDW++FTKGYFLNR+
Sbjct: 142 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRD 201

Query: 121 TLVAVLLLIDASVPPQRIDLDCANWLGRNNIPVTFVFTKCDKMKVAKGKRPDENIKEFQE 180
           +LV VLLLIDASVPPQ+IDLDCANWLGRNN+P+TFVFTKCDKMK  KGKRPDENIK FQ+
Sbjct: 202 SLVCVLLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQ 261

Query: 181 IIKQNFKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 217
           II++NFK HPPWI+TSSV+GLGRD+LLLH+SQLRNYW
Sbjct: 262 IIRENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYW 298


>AT5G11480.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:3669350-3671471
           REVERSE LENGTH=318
          Length = 318

 Score =  273 bits (699), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 133/218 (61%), Positives = 168/218 (77%), Gaps = 2/218 (0%)

Query: 2   ILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVR 61
           IL  SNIV+  YA D+++   ++VKSS +  DCP D  PEFA++GRSNVGKSSL+NSLVR
Sbjct: 98  ILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVR 157

Query: 62  KKELALTSKRPGKTQLINHFLVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNT 121
           +K LALTSK+PGKTQ INHF +N  WYLVDLPGYG+A A    K DW  FTK YFLNR+T
Sbjct: 158 RKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRST 217

Query: 122 LVAVLLLIDASVPPQRIDLDCANWLGRNNIPVTFVFT--KCDKMKVAKGKRPDENIKEFQ 179
           LV+V LL+DAS+P + IDL+ A+WLG+N +P+T +FT     K K   GK+P+ NIKEFQ
Sbjct: 218 LVSVFLLVDASIPVKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQ 277

Query: 180 EIIKQNFKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 217
           ++I+  F+  PPWIMTSSVT  GRD++LLH++QLRNYW
Sbjct: 278 DLIQGFFETTPPWIMTSSVTNQGRDEILLHMAQLRNYW 315


>AT5G58370.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:23593358-23595645
           FORWARD LENGTH=465
          Length = 465

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 93/184 (50%), Gaps = 9/184 (4%)

Query: 22  VEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVRKKELALTSKRPGKTQLINHF 81
           +EF  ++  +   P  D PE A  GRSNVGKSSL+N+L R+  +  TS +PG TQ IN F
Sbjct: 271 LEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF 330

Query: 82  LVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNTLVAVLLLIDASVPPQRIDLD 141
            +     LVDLPGYGFA A +  K  W    K Y   R +L  V LL+D     +  D +
Sbjct: 331 GLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQE 390

Query: 142 CANWLGRNNIPVTFVFTKCD---KMKVAKGKRPDENIKEFQEIIKQNFKQHPPWIMTSSV 198
             N + R+N     V TK D    + VA+         + +E +K N     P +M SS 
Sbjct: 391 LINLMERSNTKYQIVLTKTDVVFPIDVAR------RAMQIEEKLKANRSIVQPLMMVSSR 444

Query: 199 TGLG 202
           +G G
Sbjct: 445 SGAG 448


>AT5G58370.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:23593358-23595565
           FORWARD LENGTH=446
          Length = 446

 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 75/140 (53%)

Query: 22  VEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVRKKELALTSKRPGKTQLINHF 81
           +EF  ++  +   P  D PE A  GRSNVGKSSL+N+L R+  +  TS +PG TQ IN F
Sbjct: 271 LEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF 330

Query: 82  LVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNTLVAVLLLIDASVPPQRIDLD 141
            +     LVDLPGYGFA A +  K  W    K Y   R +L  V LL+D     +  D +
Sbjct: 331 GLGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQE 390

Query: 142 CANWLGRNNIPVTFVFTKCD 161
             N + R+N     V TK D
Sbjct: 391 LINLMERSNTKYQIVLTKTD 410