Miyakogusa Predicted Gene

Lj4g3v0451200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0451200.1 Non Chatacterized Hit- tr|J3KY33|J3KY33_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G1,45.71,3e-19,seg,NULL; INTEGRAL MEMBRANE FAMILY PROTEIN,NULL;
NITRATE, FROMATE, IRON DEHYDROGENASE,NULL; A_tha_TI,CUFF.47265.1
         (172 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF049...   121   2e-28
AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF049...   121   2e-28
AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF049...    74   4e-14
AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF049...    71   3e-13
AT4G20390.1 | Symbols:  | Uncharacterised protein family (UPF049...    68   3e-12
AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF049...    67   4e-12
AT4G25040.1 | Symbols:  | Uncharacterised protein family (UPF049...    66   1e-11
AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF049...    62   2e-10
AT3G06390.1 | Symbols:  | Uncharacterised protein family (UPF049...    59   2e-09
AT3G11550.1 | Symbols:  | Uncharacterised protein family (UPF049...    57   4e-09
AT4G15610.1 | Symbols:  | Uncharacterised protein family (UPF049...    55   2e-08
AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF049...    55   3e-08
AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF049...    54   4e-08
AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF049...    51   4e-07

>AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:1570042-1571483 FORWARD LENGTH=164
          Length = 164

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)

Query: 25  IVMVTSHESTEILNLTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTCFQNSLWRLIVI 84
           IVM+TS E    L ++  AKY+D   FKYFVIA A+ S YS + VLF   ++ LW+ +V+
Sbjct: 26  IVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFL-VLFLPKESLLWKFVVV 84

Query: 85  LDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSGALV 135
           LD                +AQVGKKGN++AGWLPICGQVPKFCD ++GAL+
Sbjct: 85  LDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPKFCDQITGALI 135


>AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:921038-921844 FORWARD LENGTH=164
          Length = 164

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 1/119 (0%)

Query: 17  FGATIAAAIVMVTSHESTEILNLTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTCFQN 76
           F A + A I M+TS E +    ++  AKYSD   FKYFVIA AI + YS + VLF   ++
Sbjct: 18  FCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFL-VLFLPKES 76

Query: 77  SLWRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSGALV 135
            LW+ +V+LD                +AQVGK+GN++AGWLPICGQVP+FCD ++GAL+
Sbjct: 77  LLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQITGALI 135


>AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:17942100-17943174 REVERSE LENGTH=197
          Length = 197

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 15/134 (11%)

Query: 17  FGATIAAAIVMVTSHESTEIL---------NLTFTAKYSDEPVFKYFVIAEAIASGYSLI 67
           F AT++AAIVM  + E+   +           TFTAK+   P F +FV+A A+ S ++L+
Sbjct: 27  FSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVSFHNLL 86

Query: 68  IVLFTCFQNSL----WRL--IVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICG 121
           ++    F   +    +RL  + ILD                +A+VGK GN HA W  IC 
Sbjct: 87  MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICD 146

Query: 122 QVPKFCDHVSGALV 135
           +   +CDH +GAL+
Sbjct: 147 RFATYCDHGAGALI 160


>AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:4967094-4967846 FORWARD LENGTH=187
          Length = 187

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 17  FGATIAAAIVMVTSHESTEILN--LTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTCF 74
           F  TI +AI+M T+HE+       + F A+Y+D P   +FV+A A+ SGY LI+ L   F
Sbjct: 37  FFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAVVSGY-LILSLTLAF 95

Query: 75  QNSLWR-------LIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFC 127
            + + R       L++ILD                I  +   GN+   W  IC Q   FC
Sbjct: 96  VHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFC 155

Query: 128 DHVSGALV 135
           + +SG+L+
Sbjct: 156 ERISGSLI 163


>AT4G20390.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:11007068-11007869 FORWARD LENGTH=197
          Length = 197

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)

Query: 17  FGATIAAAIVMVTSHESTEI---------LNLTFTAKYSDEPVFKYFVIAEAIASGYSLI 67
           F AT+AAAIVM  + E+  +         +  T TAK+   P F +FVIA  + S ++L+
Sbjct: 27  FMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVSFHNLL 86

Query: 68  IVLFTCFQNSL----WRL--IVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICG 121
           +++   F   L     RL  I ILD                +A++GK GN HA W  +C 
Sbjct: 87  MIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCD 146

Query: 122 QVPKFCDH 129
           +   +CDH
Sbjct: 147 RFTTYCDH 154


>AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:4840798-4841660 REVERSE LENGTH=209
          Length = 209

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 17  FGATIAAAIVMVTSHESTEILN--LTFTAKYSDEPVFKYFVIAEAIASGY---SLIIVLF 71
           FG TI +A+ M T+HES   L+  +    KYSD P   +FV+A AI+ GY   SL + +F
Sbjct: 61  FG-TIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAISGGYLVLSLPVSIF 119

Query: 72  TCF--QNSLWRLIV-ILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCD 128
             F  Q    R+I+ ++D                   +  +GN+ A W PIC Q   FC+
Sbjct: 120 HIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTANWPPICQQFDGFCE 179

Query: 129 HVSGALV 135
            +SG+L+
Sbjct: 180 RISGSLI 186


>AT4G25040.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:12868320-12869319 FORWARD LENGTH=170
          Length = 170

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 18  GATIAAAIVMVTSHESTEILNLTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTCF--- 74
           GA +A+  VM+T+ E   +  + F AKYS    F+Y V A+      +L  +++ C    
Sbjct: 27  GAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFTLVWACLAVR 86

Query: 75  QNSLWRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSGAL 134
           +  L   +   D                   VGK GN  AGWLPICG V  +C  V+ +L
Sbjct: 87  RRGLVFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYVHGYCSRVTISL 146


>AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15159744-15160669 REVERSE LENGTH=206
          Length = 206

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 12/126 (9%)

Query: 20  TIAAAIVMVTSHESTEILN--LTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTCFQNS 77
           TI AA VM T+ E+       L F A Y D P F+YFVIA A+ + Y ++ + F+    S
Sbjct: 60  TIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIV--S 117

Query: 78  LWR--------LIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDH 129
           + R        +++I D                I  +   GN    WLPIC Q   FC +
Sbjct: 118 IVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQN 177

Query: 130 VSGALV 135
           VS A+V
Sbjct: 178 VSTAVV 183


>AT3G06390.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:1938913-1939707 REVERSE LENGTH=199
          Length = 199

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 17  FGATIAAAIVMVTSHESTEILNLT-------FTAKYSDEPVFKYFVIAEAIASGYSLIIV 69
           F AT+ A IVMVTS + TE+  L         +A+++D P F YFV+A  +AS Y+LI  
Sbjct: 46  FSATLTALIVMVTSDQ-TEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALIST 104

Query: 70  LFTC-------FQNSLWRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQ 122
           L +        F       +  LD                +A +  KGN   GW  IC  
Sbjct: 105 LVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV 164

Query: 123 VPKFCDHVS 131
             KFC +++
Sbjct: 165 YDKFCRYIA 173


>AT3G11550.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:3638262-3639052 FORWARD LENGTH=204
          Length = 204

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 27  MVTSHESTEILN--LTFTAKYSDEPVFKYFVIAEAIASGY---SLIIVLFTCFQ---NSL 78
           M TS E+       L F A Y D P F++FVIA A+  GY   SL I + T  +    + 
Sbjct: 65  MGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAP 124

Query: 79  WRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSG 132
             L+++LD                I+ +   GN +  WLPIC Q   FC   SG
Sbjct: 125 RLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 178


>AT4G15610.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8909162-8910641 FORWARD LENGTH=193
          Length = 193

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 14/131 (10%)

Query: 17  FGATIAAAIVMVTSHESTEILNLTFT------AKYSDEPVFKYFVIAEAIASGYSLI--I 68
           F AT+ + +VMVTS ++  I  L  T      A++++ P   YFV+A ++A  YS++   
Sbjct: 38  FAATLTSIVVMVTSKQTKNIF-LPGTPIRIPAAEFTNSPALIYFVVALSVACFYSIVSTF 96

Query: 69  VLFTCFQNS-----LWRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQV 123
           V  + F+       L   + I+D                +A +G KGN    W  IC   
Sbjct: 97  VTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIY 156

Query: 124 PKFCDHVSGAL 134
            KFC HV GA+
Sbjct: 157 DKFCRHVGGAI 167


>AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:11708628-11709905 REVERSE LENGTH=221
          Length = 221

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 39  LTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFT--CFQNSLW---RLIVIL-DXXXXXX 92
           L F A Y+D P    FVI  +I  GY  + + F+  C    L    RL +IL D      
Sbjct: 95  LQFQADYTDLPTMSSFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGL 154

Query: 93  XXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSGALV 135
                     I  +   GNS + WLP+C Q   FC   SGA+V
Sbjct: 155 TLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVV 197


>AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:1877333-1878116 FORWARD LENGTH=202
          Length = 202

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 27  MVTSHESTEILN--LTFTAKYSDEPVFKYFVIAEAIASGYSLIIVLFTC------FQNSL 78
           M TS E+       L F A Y D P F++FV+A AI +GY ++ + F+          + 
Sbjct: 63  MGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAP 122

Query: 79  WRLIVILDXXXXXXXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVSGALV 135
             L+++LD                I  +   GN++  WLPIC Q   FC   SGA+V
Sbjct: 123 RLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVV 179


>AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8917527-8918683 FORWARD LENGTH=190
          Length = 190

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 37  LNLTFTAKYSDEPVFKYFVIAEAIASGY---SLIIVLFTCFQNSLWRLIVIL--DXXXXX 91
           LN++ TAK S    F Y + A AIA GY   S++IV+ +  + S   L+ +L  D     
Sbjct: 66  LNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVA 125

Query: 92  XXXXXXXXXXXIAQVGKKGNSHAGWLPICGQVPKFCDHVS 131
                      I  +G+ GN H  W  +CG   KFC+  +
Sbjct: 126 LLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAA 165