Miyakogusa Predicted Gene

Lj4g3v0451030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0451030.1 Non Chatacterized Hit- tr|I1KLI6|I1KLI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,94.35,0,ZF_RING_2,Zinc finger, RING-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FYVE/P,CUFF.47252.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47160.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   311   3e-85
AT5G01520.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   307   4e-84
AT3G47160.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   303   7e-83
AT5G58787.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   293   1e-79
AT5G58787.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   259   1e-69
AT5G01520.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   231   3e-61
AT1G24440.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   211   3e-55
AT1G13195.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   202   2e-52
AT1G13195.2 | Symbols:  | RING/U-box superfamily protein | chr1:...   176   1e-44

>AT3G47160.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=245
          Length = 245

 Score =  311 bits (797), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 141/241 (58%), Positives = 181/241 (75%), Gaps = 2/241 (0%)

Query: 10  SFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXX 69
           SFKDSLK LEADI HANT+A D+PRE DGA +QMR+SY+PAA   LFLVQWTDCH     
Sbjct: 5   SFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTL 64

Query: 70  XXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXX 129
                  Y  Y DG TTMS +ERK SI++FYAVI+PSLLQL++G+TD +DRKQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIR 124

Query: 130 XXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFC 189
                     + S++DIERE+ECGICME N+ +VLPNC H++C+KCYR+W   S+SCPFC
Sbjct: 125 YRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFC 184

Query: 190 RDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLFDT--YDSHI 247
           RD+LKRVNSGDLW+  ++ D V+M T+ REN +RLF+YI+KLP++VP+ +F +  YD H+
Sbjct: 185 RDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHV 244

Query: 248 R 248
           +
Sbjct: 245 K 245


>AT5G01520.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208399 FORWARD LENGTH=242
          Length = 242

 Score =  307 bits (787), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 139/229 (60%), Positives = 170/229 (74%)

Query: 7   MRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXX 66
           MRKSFKDSLK LEADI  ANTLAS++P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH  
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 67  XXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVC 126
                     YK YVDG TTMS HERK SIREFY V++PSLLQL  G+TD E+RKQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 127 MXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSC 186
                        + S++D+ERE+ECGIC+E  +K+VLP CNH+MC+ CYR WR  SQSC
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 180

Query: 187 PFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIV 235
           PFCR +LKRVNSGDLW++T   +  D+  + +ENL+RL +YIDKLP++ 
Sbjct: 181 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVT 229


>AT3G47160.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=257
          Length = 257

 Score =  303 bits (776), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 141/253 (55%), Positives = 181/253 (71%), Gaps = 14/253 (5%)

Query: 10  SFKDSLKLLEADIHHANTLAS------------DFPREYDGACLQMRMSYSPAAHLFLFL 57
           SFKDSLK LEADI HANT+ S            D+PRE DGA +QMR+SY+PAA   LFL
Sbjct: 5   SFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQFLLFL 64

Query: 58  VQWTDCHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDT 117
           VQWTDCH            Y  Y DG TTMS +ERK SI++FYAVI+PSLLQL++G+TD 
Sbjct: 65  VQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDL 124

Query: 118 EDRKQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYR 177
           +DRKQK VC             + S++DIERE+ECGICME N+ +VLPNC H++C+KCYR
Sbjct: 125 DDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYR 184

Query: 178 EWRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPE 237
           +W   S+SCPFCRD+LKRVNSGDLW+  ++ D V+M T+ REN +RLF+YI+KLP++VP+
Sbjct: 185 DWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244

Query: 238 SLFDT--YDSHIR 248
            +F +  YD H++
Sbjct: 245 QVFASSPYDCHVK 257


>AT5G58787.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=242
          Length = 242

 Score =  293 bits (749), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 146/241 (60%), Positives = 175/241 (72%), Gaps = 5/241 (2%)

Query: 10  SFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXX 69
           SFKDSLK LEADI HANTLA D+PRE DGA +QMR+SYSP A  FLFLVQWTDC      
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 70  XXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXX 129
                  Y  Y DG TTMS +ERKASIREF AVI PSL QLQ+GVTD +D KQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMR 124

Query: 130 XXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFC 189
                     +     IERE+ECGICME NSK+VLPNC H++C+KCYR+WR  SQSCPFC
Sbjct: 125 YRKKDESEMSEIE---IEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 181

Query: 190 RDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLFDT--YDSHI 247
           RD+LKRV+SGDLW+F D+ D V++  + REN +RLFMYI+KLP++VP+ ++ +  YD H+
Sbjct: 182 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 241

Query: 248 R 248
           R
Sbjct: 242 R 242


>AT5G58787.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=227
          Length = 227

 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/241 (55%), Positives = 162/241 (67%), Gaps = 20/241 (8%)

Query: 10  SFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXX 69
           SFKDSLK LEADI HANTLA D+PRE DGA +QMR+SYSP A  FLFLVQWTDC      
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 70  XXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXX 129
                  Y  Y DG TTMS +ERKASIREF                D +D KQK VC   
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEVCKMR 109

Query: 130 XXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFC 189
                     +     IERE+ECGICME NSK+VLPNC H++C+KCYR+WR  SQSCPFC
Sbjct: 110 YRKKDESEMSEIE---IEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 166

Query: 190 RDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLFDT--YDSHI 247
           RD+LKRV+SGDLW+F D+ D V++  + REN +RLFMYI+KLP++VP+ ++ +  YD H+
Sbjct: 167 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 226

Query: 248 R 248
           R
Sbjct: 227 R 227


>AT5G01520.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208170 FORWARD LENGTH=172
          Length = 172

 Score =  231 bits (590), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 106/171 (61%), Positives = 126/171 (73%)

Query: 7   MRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXX 66
           MRKSFKDSLK LEADI  ANTLAS++P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH  
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 67  XXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVC 126
                     YK YVDG TTMS HERK SIREFY V++PSLLQL  G+TD E+RKQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 127 MXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYR 177
                        + S++D+ERE+ECGIC+E  +K+VLP CNH+MC+ CYR
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYR 171


>AT1G24440.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:8662340-8663777 FORWARD LENGTH=251
          Length = 251

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/247 (45%), Positives = 147/247 (59%), Gaps = 10/247 (4%)

Query: 8   RKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD--CHX 65
           + S++DSLK+LEADI HAN LA++ P    G  LQM++  S  A  F+FL+QW D  C  
Sbjct: 7   KSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLL 66

Query: 66  XXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDR----- 120
                      YKV  DG    S + RKA+IREFY VI PSL +L     D  D      
Sbjct: 67  PRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYP 126

Query: 121 KQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWR 180
             KA+                + +D+EREDECGIC+E  +K+VLPNC HAMC+KCYR W 
Sbjct: 127 NPKAITKKQYDIEGSRYM---NSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWN 183

Query: 181 TISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLF 240
           T S+SCPFCR ++KRVNS DLWV T   D VD  TVT+E+L R +++I+ LP   PE+ F
Sbjct: 184 TKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAF 243

Query: 241 DTYDSHI 247
             Y+ ++
Sbjct: 244 LVYNEYL 250


>AT1G13195.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4503347 REVERSE LENGTH=260
          Length = 260

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 141/245 (57%), Gaps = 19/245 (7%)

Query: 11  FKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD----CHXX 66
           + +SLK+LEAD+ HAN+LA   P   +   LQM++ +S  A L LFL++W D    C   
Sbjct: 16  YYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIP 75

Query: 67  XXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTE-------- 118
                     YKV  DG   ++TH RKA+I EFY VI PSL  L   + + E        
Sbjct: 76  RYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDL 135

Query: 119 DRKQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYRE 178
            R  K +              + S+  +ERE+ECGIC+ET +K+VLPNC H+MC+KCYR 
Sbjct: 136 KRLSKKITKEARSS-------RFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRN 188

Query: 179 WRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPES 238
           W   SQSCPFCR ++KRVNS DLWV     D VD  T +RE+L R ++YI+ LP   PE+
Sbjct: 189 WNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEA 248

Query: 239 LFDTY 243
           LF  Y
Sbjct: 249 LFVVY 253


>AT1G13195.2 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4502855 REVERSE LENGTH=222
          Length = 222

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/215 (43%), Positives = 122/215 (56%), Gaps = 19/215 (8%)

Query: 41  LQMRMSYSPAAHLFLFLVQWTD----CHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASI 96
           LQM++ +S  A L LFL++W D    C             YKV  DG   ++TH RKA+I
Sbjct: 8   LQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATI 67

Query: 97  REFYAVIYPSLLQLQKGVTDTE--------DRKQKAVCMXXXXXXXXXXXWQSSDLDIER 148
            EFY VI PSL  L   + + E         R  K +              + S+  +ER
Sbjct: 68  SEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSS-------RFSNAGLER 120

Query: 149 EDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDNLKRVNSGDLWVFTDRR 208
           E+ECGIC+ET +K+VLPNC H+MC+KCYR W   SQSCPFCR ++KRVNS DLWV     
Sbjct: 121 EEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDN 180

Query: 209 DAVDMATVTRENLRRLFMYIDKLPVIVPESLFDTY 243
           D VD  T +RE+L R ++YI+ LP   PE+LF  Y
Sbjct: 181 DVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 215