Miyakogusa Predicted Gene

Lj4g3v0450910.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450910.2 Non Chatacterized Hit- tr|I3S756|I3S756_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.44,0,DUF974,Protein of unknown function DUF974;
UNCHARACTERIZED,NULL; UNCHARACTERIZED,Protein of unknown ,CUFF.47239.2
         (440 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47960.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   614   e-176

>AT2G47960.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF974
           (InterPro:IPR010378); Has 285 Blast hits to 284 proteins
           in 126 species: Archae - 0; Bacteria - 0; Metazoa - 150;
           Fungi - 68; Plants - 32; Viruses - 0; Other Eukaryotes -
           35 (source: NCBI BLink). | chr2:19625631-19628869
           FORWARD LENGTH=442
          Length = 442

 Score =  614 bits (1583), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/431 (69%), Positives = 356/431 (82%), Gaps = 12/431 (2%)

Query: 22  HSVAFRVMRLCRPSFNVDPPLRLDPADLFVGEDLFDDPAAPA-----VDSLIAPDSDPNY 76
           HS+AFRVMRLC+PSF+VDPPLR+DP DL  GED  DDP++ +     V S  A DSD +Y
Sbjct: 12  HSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAVDSDLSY 71

Query: 77  RNRFLLNHFSDALGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQTE 136
           RNRFLLNH +D +GLSGLL+LPQSFGAIYLGETFCSYIS+NNSS  EVR+V IKAEIQTE
Sbjct: 72  RNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIKAEIQTE 131

Query: 137 RQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQFFK 196
           RQRILLLDTSKSPVE+IR GGRYDFIVEHDVKELG HTLVC+ALYND DGERKYLPQFFK
Sbjct: 132 RQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGERKYLPQFFK 191

Query: 197 FIVANPLSVRT-----KETTFLEACIENHTKSNLFMDQVDFEPAQYYSATTLKGDGHHSE 251
           F+VANPLSVRT     KETTFLEACIENHTK+NLFMDQVDFEPA+ +SA  L+ +    +
Sbjct: 192 FVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRLQNEDSTED 251

Query: 252 KDSSARE--IFKPPILIRSGGGIYNYLYQLKSSSDGSVQTKVEGSNVLGKLQITWRTNLG 309
             +S     I KPP++IRSGGGI+NYLY+L  S+D S QTK +GSN+LGK QITWRTNLG
Sbjct: 252 PPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNPSADVSGQTKFQGSNILGKFQITWRTNLG 311

Query: 310 EPGRLQTQQILGTPTTKKEIELQVIEVPSIINLQRPFKLKLNLTNQSERNLGPFEVSLSQ 369
           EPGRLQTQQILG P ++KEI ++V+EVP++I+L RPF+  LNLTNQ++R LGPFEVSLSQ
Sbjct: 312 EPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQLGPFEVSLSQ 371

Query: 370 NGSSGERVVVINGLQTRVLSQVEALGSTDFHLNLVATKPGIQRITGITVFDTKEMKSYEP 429
           + +  E+ V INGLQT +L ++EA GS DF LNL+A+K G+Q+I GIT  DT+E K+YE 
Sbjct: 372 DETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKIAGITALDTREKKTYEL 431

Query: 430 LPDLEIFVDIN 440
           +PD+EIFV+ +
Sbjct: 432 VPDMEIFVETD 442