Miyakogusa Predicted Gene

Lj4g3v0450840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450840.2 Non Chatacterized Hit- tr|I1KLI0|I1KLI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42126
PE,86.45,0,seg,NULL; dsrm,Double-stranded RNA-binding; NIF,NLI
interacting factor; DS_RBD,Double-stranded RNA-b,CUFF.47230.2
         (955 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21670.1 | Symbols: CPL1, FRY2, ATCPL1 | C-terminal domain ph...  1109   0.0  
AT5G01270.2 | Symbols: CPL2 | carboxyl-terminal domain (ctd) pho...   621   e-178
AT5G01270.1 | Symbols: CPL2, ATCPL2 | carboxyl-terminal domain (...   621   e-178

>AT4G21670.1 | Symbols: CPL1, FRY2, ATCPL1 | C-terminal domain
           phosphatase-like 1 | chr4:11511511-11516922 FORWARD
           LENGTH=967
          Length = 967

 Score = 1109 bits (2868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/979 (59%), Positives = 714/979 (72%), Gaps = 58/979 (5%)

Query: 6   VYQGEVVLGEVDIYPEVTNNFNYNKNHLDDDLMMKE--------------IRISNFSQPS 51
           V+ G+  LGE++IYP      +   N   DD+M +               IRIS+FSQ  
Sbjct: 9   VFHGDGRLGELEIYP------SRELNQQQDDVMKQRKKKQREVMELAKMGIRISHFSQSG 62

Query: 52  ERCLPLAVLHTVTSCGVCFKME-SKTQQQDGLFHLHSLCIRENKTAVMPLRGEELHLVAM 110
           ERC PLA+L T++SCG+CFK+E S +  Q+ L   +S C+R+NKTAVM L GEELHLVAM
Sbjct: 63  ERCPPLAILTTISSCGLCFKLEASPSPAQESLSLFYSSCLRDNKTAVMLLGGEELHLVAM 122

Query: 111 HSRN--DDRPCFWGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDAL 168
           +S N  +DRPCFW F VA G+YDSCLVMLNLRCLGIVFDLDETL+VANTMRSFED+ID  
Sbjct: 123 YSENIKNDRPCFWAFSVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIDGF 182

Query: 169 QRKINYEVDPQRISGMQAEIKRYLDDKSILKQYAENDLVVDNGKVIKVQSEIVPALSDSH 228
           QR+IN E+DPQR++ + AE+KRY DDK++LKQY E+D VV+NG+VIKVQSEIVPALSD+H
Sbjct: 183 QRRINNEMDPQRLAVIVAEMKRYQDDKNLLKQYIESDQVVENGEVIKVQSEIVPALSDNH 242

Query: 229 QAIVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMA 288
           Q +VRPLIRLQEKNIILTRINP IRDTSVLVR+RP+WE+LRSYLTA+GRKRFEVYVCTMA
Sbjct: 243 QPLVRPLIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMA 302

Query: 289 ERDYALEMWRLLDPDSNLINSKELLARIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRL 348
           ERDYALEMWRLLDP+ NLIN+ +LLARIVCVKSG KKSLFNVF DG+CHPKMALVIDDRL
Sbjct: 303 ERDYALEMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRL 362

Query: 349 KVWDEKDQPRVHVVPAFAPYYAPQAEASNTVPVLCVARNVACNVRGGFFKEFDDGLLPKI 408
           KVWDEKDQPRVHVVPAFAPYY+PQAEA+ T PVLCVARNVAC VRGGFF++FDD LLP+I
Sbjct: 363 KVWDEKDQPRVHVVPAFAPYYSPQAEAAAT-PVLCVARNVACGVRGGFFRDFDDSLLPRI 421

Query: 409 SLIAYEDDIKAIPPAPDVSNYLVQEDDGSVSNGNREPLMFDGMADAEVERKLKDAISVAS 468
           + I+YE+D + IP  PDVS+YLV EDD S  NGN++PL FDGMAD EVER+LK+AIS +S
Sbjct: 422 AEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASS 481

Query: 469 VMPVTTANLDPRLTSSLQYTM---VSSGSVPPPTAQAPMVQLSHVQFP--------QPTS 517
            + +  AN+DPR+ + +Q+ M    S     P       +Q S + FP        QPTS
Sbjct: 482 AV-LPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTS 540

Query: 518 LVKAL---ESSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHASSEPPFPMRHP 574
           + K L   E SL SSPAREEGEVPESELDPDTRRRLLILQHGQDTRD A SEP FP R P
Sbjct: 541 IAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPP 600

Query: 575 VPVATPRVPSRGGWFPAEEEIGSQPLNRVVPREFPVDSGPLRIEKHRPHHPPFFSKVDSS 634
           V      V SR GWFP EEE+    + R V +E+P+DS  + +EKHRP HP FFSK+D+S
Sbjct: 601 VQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNS 660

Query: 635 ISSDRILHESHQRLPKEMYHRDDRPRLSHN--SFHSLXXXXXXXXXXXXXXXXXXXXXGH 692
             SDR+LHE ++R PKE   RD++ R ++N    H                         
Sbjct: 661 TQSDRMLHE-NRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPER 719

Query: 693 SVLHADAPAVVLQDIALKCGTKVAFTSSLVASTELQFSVEAWFSGKKIGHGFGKTRKEAQ 752
           SV   +  A VL  IA+KCG KV +  SLV+ST+L+FSVEAW S +KIG G GK+R+EA 
Sbjct: 720 SVSATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREAL 779

Query: 753 DKAAEDSIKHLADIYLSRGKDELGSTYGDVGGIPNSSDNGYMGNGSSLGNQPLPK-EVSV 811
            KAAE SI++LAD Y+ R   + G ++ D    P +++N  MGN ++L NQP  + E ++
Sbjct: 780 HKAAEASIQNLADGYM-RANGDPGPSHRD--ATPFTNENISMGNANALNNQPFARDETAL 836

Query: 812 SFSTASDPSRALDPRLEVSKRSMGSISALKELCTTEGLGVSFLS---LPAPASTNSVQKD 868
             S     SR  DPRLE S R  GSI+AL+ELC +EGL ++F S   LP    ++ V +D
Sbjct: 837 PVS-----SRPTDPRLEGSMRHTGSITALRELCASEGLEMAFQSQRQLP----SDMVHRD 887

Query: 869 EVHAQVEIDGQVFGKGIGLTWDEAKMQAAEKALGSLRTMYGQSIQRRQSSPRPLQGMSNK 928
           E+HAQVEIDG+V G+G+G TWDEA+MQAAE+AL S+R+M GQ + +RQ SPR   GMSNK
Sbjct: 888 ELHAQVEIDGRVVGEGVGSTWDEARMQAAERALSSVRSMLGQPLHKRQGSPRSFGGMSNK 947

Query: 929 RLKQEYPRTLQRIPSSARY 947
           RLK ++ R+LQR+PSS RY
Sbjct: 948 RLKPDFQRSLQRMPSSGRY 966


>AT5G01270.2 | Symbols: CPL2 | carboxyl-terminal domain (ctd)
           phosphatase-like 2 | chr5:107943-112143 REVERSE
           LENGTH=774
          Length = 774

 Score =  621 bits (1602), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 361/780 (46%), Positives = 475/780 (60%), Gaps = 71/780 (9%)

Query: 2   YKSVVYQGEVVLGEVDI-YPEVTNNFNYNKNHLDDDLMMKEIRISNFSQPSERCLPLAVL 60
           +KSVVY G++ LGE+D+ +   ++ F +  +         EIRI + S   ERC PLA+L
Sbjct: 6   HKSVVYHGDLRLGELDVNHVSSSHEFRFPND---------EIRIHHLSPAGERCPPLAIL 56

Query: 61  HTVTSCGVCFKMES----KTQQQDGLFHLHSLCIRENKTAVMPLRGEELHLVAMHSRNDD 116
            T+ S  V  K+ES    K+Q+   L HLH++C  E KTAV+ L  EE+HLVAM S+   
Sbjct: 57  QTIASFAVRCKLESSAPVKSQE---LMHLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKK 113

Query: 117 RPCFWGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINYEV 176
            PCFW F V  GLYDSCL MLN RCL IVFDLDETLIVANTM+SFEDRI+AL+  I+ E+
Sbjct: 114 FPCFWCFSVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREM 173

Query: 177 DPQRISGMQAEIKRYLDDKSILKQYAENDLVVDNGKVIKVQSEIVPALSDSHQAIVRPLI 236
           DP RI+GM AE+KRY+DD+ +LKQY +ND   DNG ++K Q E V   SD  + + RP+I
Sbjct: 174 DPVRINGMSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGQEKVCRPVI 233

Query: 237 RLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEM 296
           RL EKN +LTRI P+IRDTSVLV+LRPAWE+LRSYLTA+ RKRFEVYVCTMAERDYALEM
Sbjct: 234 RLPEKNTVLTRIKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEM 293

Query: 297 WRLLDPDSNLINSKELLARIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQ 356
           WRLLDP+++LI+ KEL  RIVCVK   KKSL +VF  G CHPKMA+VIDDR+KVW++KDQ
Sbjct: 294 WRLLDPEAHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQ 353

Query: 357 PRVHVVPAFAPYYAPQAEASNTVPVLCVARNVACNVRGGFFKEFDDGLLPKISLIAYEDD 416
           PRVHVV A+ PYYAPQAE +  VP LCVARNVACNVRG FFKEFD+ L+  ISL+ YEDD
Sbjct: 354 PRVHVVSAYLPYYAPQAETALVVPHLCVARNVACNVRGYFFKEFDESLMSSISLVYYEDD 413

Query: 417 IKAIPPAPDVSNYLVQEDDGSVSNGN-REPLMFDGMADAEVERKLKDAISV-ASVMPVTT 474
           ++ +PP+PDVSNY+V ED G  SNGN   P + +GM   EVER+L  A +   S +P T+
Sbjct: 414 VENLPPSPDVSNYVVIEDPGFASNGNINAPPINEGMCGGEVERRLNQAAAADHSTLPATS 473

Query: 475 ANLDPRLTSSLQYTMVSSGSVPPPTAQAPMVQLSHVQFPQPTSLVKALESSLHSSPAREE 534
                  T   Q  ++       P   +     + +   +P         SL  +P R+ 
Sbjct: 474 NAEQKPETPKPQIAVI-------PNNASTATAAALLPSHKP---------SLLGAPRRDG 517

Query: 535 GEVPESELDPDTRRRLLILQHGQDTRDHASSEPPFPMRHPVPVATPRVPSRGGWFPAEEE 594
               +         R L+++ G D R+   ++PP   + P+   +  + S GGW   +E 
Sbjct: 518 FTFSDGG-------RPLMMRPGVDIRNQNFNQPPILAKIPMQPPSSSMHSPGGWLVDDEN 570

Query: 595 IGSQPL--NRVVPREFPVDSGPLRIEKHRPHHPPFFSKVDSSISSDRILHESHQRLPKEM 652
             S P   + + P +F             PH  P  + V          H SH R  +E+
Sbjct: 571 RPSFPGRPSGLYPSQF-------------PHGTPGSAPVGP------FAHPSHLR-SEEV 610

Query: 653 YHRDDRPRLS---HNSFHSLXXXXXXXXXXXXXXXXXXXXXGHSVLHADAPAVVLQDIAL 709
              DD  R +     +   +                     G S L   A    LQ+I  
Sbjct: 611 AMDDDLKRQNPSRQTTEGGISQNHLVSNGREHHTDGGKSNGGQSHLFVSA----LQEIGR 666

Query: 710 KCGTKVAFTSSLVASTELQFSVEAWFSGKKIGHGFGKTRKEAQDKAAEDSIKHLADIYLS 769
           +CG+KV F + +  + ELQFSVE  F+G+KIG G  KT+K+A  +AAE++++ LA+ Y++
Sbjct: 667 RCGSKVEFRTVISTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQAAENALRSLAEKYVA 726


>AT5G01270.1 | Symbols: CPL2, ATCPL2 | carboxyl-terminal domain
           (ctd) phosphatase-like 2 | chr5:108163-112143 REVERSE
           LENGTH=770
          Length = 770

 Score =  621 bits (1601), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 361/780 (46%), Positives = 475/780 (60%), Gaps = 71/780 (9%)

Query: 2   YKSVVYQGEVVLGEVDI-YPEVTNNFNYNKNHLDDDLMMKEIRISNFSQPSERCLPLAVL 60
           +KSVVY G++ LGE+D+ +   ++ F +  +         EIRI + S   ERC PLA+L
Sbjct: 6   HKSVVYHGDLRLGELDVNHVSSSHEFRFPND---------EIRIHHLSPAGERCPPLAIL 56

Query: 61  HTVTSCGVCFKMES----KTQQQDGLFHLHSLCIRENKTAVMPLRGEELHLVAMHSRNDD 116
            T+ S  V  K+ES    K+Q+   L HLH++C  E KTAV+ L  EE+HLVAM S+   
Sbjct: 57  QTIASFAVRCKLESSAPVKSQE---LMHLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKK 113

Query: 117 RPCFWGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINYEV 176
            PCFW F V  GLYDSCL MLN RCL IVFDLDETLIVANTM+SFEDRI+AL+  I+ E+
Sbjct: 114 FPCFWCFSVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREM 173

Query: 177 DPQRISGMQAEIKRYLDDKSILKQYAENDLVVDNGKVIKVQSEIVPALSDSHQAIVRPLI 236
           DP RI+GM AE+KRY+DD+ +LKQY +ND   DNG ++K Q E V   SD  + + RP+I
Sbjct: 174 DPVRINGMSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGQEKVCRPVI 233

Query: 237 RLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEM 296
           RL EKN +LTRI P+IRDTSVLV+LRPAWE+LRSYLTA+ RKRFEVYVCTMAERDYALEM
Sbjct: 234 RLPEKNTVLTRIKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEM 293

Query: 297 WRLLDPDSNLINSKELLARIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQ 356
           WRLLDP+++LI+ KEL  RIVCVK   KKSL +VF  G CHPKMA+VIDDR+KVW++KDQ
Sbjct: 294 WRLLDPEAHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQ 353

Query: 357 PRVHVVPAFAPYYAPQAEASNTVPVLCVARNVACNVRGGFFKEFDDGLLPKISLIAYEDD 416
           PRVHVV A+ PYYAPQAE +  VP LCVARNVACNVRG FFKEFD+ L+  ISL+ YEDD
Sbjct: 354 PRVHVVSAYLPYYAPQAETALVVPHLCVARNVACNVRGYFFKEFDESLMSSISLVYYEDD 413

Query: 417 IKAIPPAPDVSNYLVQEDDGSVSNGN-REPLMFDGMADAEVERKLKDAISV-ASVMPVTT 474
           ++ +PP+PDVSNY+V ED G  SNGN   P + +GM   EVER+L  A +   S +P T+
Sbjct: 414 VENLPPSPDVSNYVVIEDPGFASNGNINAPPINEGMCGGEVERRLNQAAAADHSTLPATS 473

Query: 475 ANLDPRLTSSLQYTMVSSGSVPPPTAQAPMVQLSHVQFPQPTSLVKALESSLHSSPAREE 534
                  T   Q  ++       P   +     + +   +P         SL  +P R+ 
Sbjct: 474 NAEQKPETPKPQIAVI-------PNNASTATAAALLPSHKP---------SLLGAPRRDG 517

Query: 535 GEVPESELDPDTRRRLLILQHGQDTRDHASSEPPFPMRHPVPVATPRVPSRGGWFPAEEE 594
               +         R L+++ G D R+   ++PP   + P+   +  + S GGW   +E 
Sbjct: 518 FTFSDG-------GRPLMMRPGVDIRNQNFNQPPILAKIPMQPPSSSMHSPGGWLVDDEN 570

Query: 595 IGSQPL--NRVVPREFPVDSGPLRIEKHRPHHPPFFSKVDSSISSDRILHESHQRLPKEM 652
             S P   + + P +F             PH  P  + V          H SH R  +E+
Sbjct: 571 RPSFPGRPSGLYPSQF-------------PHGTPGSAPVGP------FAHPSHLR-SEEV 610

Query: 653 YHRDDRPRLS---HNSFHSLXXXXXXXXXXXXXXXXXXXXXGHSVLHADAPAVVLQDIAL 709
              DD  R +     +   +                     G S L   A    LQ+I  
Sbjct: 611 AMDDDLKRQNPSRQTTEGGISQNHLVSNGREHHTDGGKSNGGQSHLFVSA----LQEIGR 666

Query: 710 KCGTKVAFTSSLVASTELQFSVEAWFSGKKIGHGFGKTRKEAQDKAAEDSIKHLADIYLS 769
           +CG+KV F + +  + ELQFSVE  F+G+KIG G  KT+K+A  +AAE++++ LA+ Y++
Sbjct: 667 RCGSKVEFRTVISTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQAAENALRSLAEKYVA 726