Miyakogusa Predicted Gene
- Lj4g3v0450550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450550.1 Non Chatacterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,25.88,2e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.47225.1
(539 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 542 e-154
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 431 e-121
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 411 e-115
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 410 e-115
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 401 e-112
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 384 e-107
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 380 e-105
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 379 e-105
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 367 e-102
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 365 e-101
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 365 e-101
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 6e-99
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 356 2e-98
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 2e-97
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 3e-97
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 6e-97
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 348 4e-96
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 345 3e-95
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 345 3e-95
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 8e-95
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 344 9e-95
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 344 1e-94
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 1e-94
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 343 2e-94
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 342 4e-94
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 5e-92
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 9e-92
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 334 1e-91
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 329 2e-90
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 2e-89
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 5e-89
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 6e-89
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 322 4e-88
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 6e-88
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 320 1e-87
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 1e-87
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 319 3e-87
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 319 3e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 5e-87
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 316 3e-86
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 8e-86
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 1e-85
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 3e-85
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 312 3e-85
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 6e-85
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 8e-85
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 8e-84
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 1e-83
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 1e-83
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 4e-83
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 304 9e-83
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 300 2e-81
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 3e-81
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 4e-80
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 295 6e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 294 1e-79
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 293 2e-79
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 291 1e-78
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 289 3e-78
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 7e-78
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 9e-78
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 2e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 285 7e-77
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 3e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 280 2e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 5e-75
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 269 3e-72
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 7e-70
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 7e-63
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 236 3e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 230 2e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 106 5e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 1e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 3e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 3e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 96 6e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 8e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 92 1e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 3e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 86 8e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 2e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 77 4e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 76 5e-14
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 76 8e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 8e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 9e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 1e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 2e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 74 3e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 4e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 2e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 2e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 259/428 (60%), Positives = 325/428 (75%), Gaps = 1/428 (0%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMW 152
L M G + A KVF EM E+NVV+WT+MI+ Y+ D+ S RR DL+PERD+V+W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 153 SIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
+ +ISGYIE G+M+ AR LFD+MP RDVMSWNT+L GYAN GD+ + E+VF++MPERNV+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
SWN LI GYA+NGR S+ L +FK+M+ EG VVPND T+ VL AC++LGA D GKWVH Y
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 273 AESIGY-KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
E++GY K ++ V NALIDMY KCG IE A++VF + RRD+ISWNTMINGLA HG+ +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL+LF +MKNS PD VTFVG+L AC HMGLV DG YF SM +SI+P+IEH GC+
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
DLL RAG L QAV F+ KMP++ DAVIW +LLGA + +K V+I E+A + LI+LEP+NPA
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETES 511
NFVMLSNIY D GR+ D ARLK+AMRDTGF+K G S IE +D +V+FYS E+HP TE
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE 453
Query: 512 IYRALRGL 519
+ R LR L
Sbjct: 454 LQRILREL 461
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 151/372 (40%), Gaps = 102/372 (27%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A KVF +M E N W +M NGY L N+ + +F L
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLL--------------NKDLVSARRYFDLS---- 85
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ WN+ + + IEM G++ +A +F +MP R+V+
Sbjct: 86 -----------------PERDIVLWNTMI-SGYIEM----GNMLEARSLFDQMPCRDVMS 123
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
W ++ Y + GD+ + R+ D PER+V W+ +I GY ++G + F +M
Sbjct: 124 WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 176 --PNRDVMS----------------W------------------NTLLNGYANSGDVGSF 199
PN M+ W N L++ Y G +
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+VF+ + R++ SWN +I G A +G ++AL F +M G + P+ T V VL AC
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSG-ISPDKVTFVGVLCACKH 302
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVG----------NALIDMYAKCGVIESAVDVFNCLD 309
+G ++ G + Y +MF ++D+ ++ G + AV+ N +
Sbjct: 303 MGLVEDG---------LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 353
Query: 310 -RRDIISWNTMI 320
+ D + W T++
Sbjct: 354 VKADAVIWATLL 365
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/578 (39%), Positives = 336/578 (58%), Gaps = 43/578 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A VF + EPN WN MF G++L+ + L+ M P N +T P V++
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP-NSYTFPFVLK 142
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+K+ A +EG+Q+H K G + ++ T+LI MY G + DA+KVF + P R+VV
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
+TA+I Y S G + + ++L D P +DVV W+ +ISGY E+G+ A ELF M
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 176 -PN--------------------RDVMSW-------------NTLLNGYANSGDVGSFEK 201
P+ R V W N L++ Y+ G++ +
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+FE +P ++V SWN LIGGY + +AL F++ML G+ PND T++++L AC+ LG
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLG 381
Query: 262 ALDMGKWVHVYAES--IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
A+D+G+W+HVY + G + +LIDMYAKCG IE+A VFN + + + SWN M
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I G AMHG + LF +M+ QPD +TFVG+LSAC+H G++ G F++M Y
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 501
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ P++EHYGCM DLLG +GL +A + M MEPD VIW SLL AC+ H NVE+ E
Sbjct: 502 MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 561
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
++LI++EP+NP ++V+LSNIY GRW +VA+ + + D G +K+PGCS IE + V EF
Sbjct: 562 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 500 YSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
D+ HP IY L + +LL G+VP+ +V Q
Sbjct: 622 IIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 325/576 (56%), Gaps = 39/576 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +ARKVFD++P+PN+ WN + Y+ + F +M + N +T P +++
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ ++ ++ G+ +H +A K + F+ +LI Y + G + A KVF + E++VV
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------------------- 158
W +MI+ ++ G L DV + + G
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 159 -----------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
Y + G + A+ LFD M +D ++W T+L+GYA S D + +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
V MP++++ +WN LI Y +NG+ ++AL F ++ ++ ++ N TLV+ L AC+++G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
AL++G+W+H Y + G + N V +ALI MY+KCG +E + +VFN +++RD+ W+ MI
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
GLAMHG +A+ +F +M+ + +P+GVTF + AC+H GLV + F M +Y I+
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P+ +HY C+ D+LGR+G L++AV F+ MP+ P +W +LLGAC+ H N+ +AE+A
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
L+ELEP+N V+LSNIY LG+W++V+ L+ MR TG +K PGCS IE + + EF S
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 619
Query: 502 LDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
D HP +E +Y L + L+ +GY P + V Q
Sbjct: 620 GDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 46/406 (11%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEM--YSAKGSVGDAYKVFGEMPERNVVVWTAM 124
++R+ +Q H + G + + + L M S+ S+ A KVF E+P+ N W +
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 125 ISAYISCGD-VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------- 176
I AY S D V S LD+ E I++ VS+ L +
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 177 -NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
DV N+L++ Y + GD+ S KVF + E++V SWN +I G+ + G ALE FK
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M E DV + T+V VL AC+++ L+ G+ V Y E N+ + NA++DMY KC
Sbjct: 222 KMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAM------------------------------ 325
G IE A +F+ ++ +D ++W TM++G A+
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 326 -HGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
+G +AL +F +++ + + + +T V LSAC +G + G + S + + I
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMN 399
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ + + G L+++ + + D +W++++G H
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 318/530 (60%), Gaps = 4/530 (0%)
Query: 1 MGHARKVFDKMPEPNTATW-NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+G+ARK+FD+ P+ + + N+M Y T + D L+ ++ + ++FT +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+SCS + V +G Q+H + GF + ++ T +++MY+ G +G A F EMP R+ V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPE-RDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
WTA+IS YI CG++ +L D P +DVV+++ ++ G+++SGDM SAR LFD+M ++
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
V++W T+++GY N D+ + K+F+ MPERN+ SWN +IGGY +N + + + F++M
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+ P+D T+++VL A S GAL +G+W H + + + V A++DMY+KCG I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E A +F+ + + + SWN MI+G A++GN AL LF M E+PD +T + +++AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITAC 384
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
H GLV +G +F M + + +IEHYGCM DLLGRAG L +A + MP EP+ +I
Sbjct: 385 NHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
+S L AC +K++E AE + +ELEP+N N+V+L N+Y RW D +K MR
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
+K GCS+IE N V EF S D HP SI+ L L M + Y
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 152/376 (40%), Gaps = 53/376 (14%)
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS-IVISGYIESGDMVSARELFD 173
E NV ++T + S +G R+L D P+RD S +I Y+E+ + L+
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 174 KMPNR-----DVMSWNTL-----------------------------------LNGYANS 193
+ D ++ TL ++ YA
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF 126
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G +G F+EMP R+ SW LI GY R G A + F QM DVV + A+
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN----AM 182
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
+ + G DM ++ E + +I Y I++A +F+ + R++
Sbjct: 183 MDGFVKSG--DMTSARRLFDEMT--HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL 238
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+SWNTMI G + + + LF +M+ + PD VT + +L A + G + G +
Sbjct: 239 VSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCH 297
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
V + +++ + D+ + G +++A +MP E W +++ + N
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNA 356
Query: 433 EIA-ELAFQHLIELEP 447
A +L +IE +P
Sbjct: 357 RAALDLFVTMMIEEKP 372
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 300/526 (57%), Gaps = 10/526 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD+MPE N +WNA+ + Y + +LF A N V
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV----K 231
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K V + + + WN+ +I Y+ G + +A ++F E P ++V WTA
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSWNT-----IITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
M+S YI V R L D PER+ V W+ +++GY++ M A+ELFD MP R+V +W
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
NT++ GYA G + + +F++MP+R+ SW +I GY+++G +AL F QM EG
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+ N + + L C+ + AL++GK +H GY+ FVGNAL+ MY KCG IE A D
Sbjct: 407 L-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F + +DI+SWNTMI G + HG AL F+ MK +PD T V +LSAC+H GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
V G YF +M Y ++P +HY CM DLLGRAGLL+ A + ++ MP EPDA IW +LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
GA R H N E+AE A + +EP+N +V+LSN+Y GRW DV +L++ MRD G +K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 484 LPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+PG S IE + F DE HPE + I+ L L + ++ GYV
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 216/461 (46%), Gaps = 33/461 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
A +VF +MP ++ ++N M +GY LF EM N ++++
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN-----VMIKGY 136
Query: 63 SKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ + + ++ + +R WN+ L Y+ G V DA VF MPE+N V W
Sbjct: 137 VRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
A++SAY+ + L +V W+ ++ G+++ +V AR+ FD M RDV+
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
SWNT++ GYA SG + ++F+E P ++V++W ++ GY +N +A E F +M
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
+V N A+L + ++M K + + N+ N +I YA+CG I A
Sbjct: 312 EVSWN-----AMLAGYVQGERMEMAKELF----DVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
++F+ + +RD +SW MI G + G++ +AL LF QM+ + + +F LS C +
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD-----LLGRAGLLDQAVSFVRKMPMEPDA 416
+ G H ++ GC + + G +++A ++M + D
Sbjct: 423 VALELGKQL------HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DI 475
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
V W +++ H E+A L F ++ E P + M++
Sbjct: 476 VSWNTMIAGYSRHGFGEVA-LRFFESMKREGLKPDDATMVA 515
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 27/336 (8%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
I Y G +A +VF MP + V + MIS Y+ G+ R+L D PERD+V W+
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 154 IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
++I GY+ + ++ ARELF+ MP RDV SWNT+L+GYA +G V VF+ MPE+N S
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS 190
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-- 271
WN L+ Y +N + +A FK ++ LV+ C G + K V
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKS--------RENWALVS--WNCLLGGFVKKKKIVEARQ 240
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
+ +S+ + ++ N +I YA+ G I+ A +F+ +D+ +W M++G + +
Sbjct: 241 FFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP--QIEHYGC 389
A LFD+M E G + M + ++ F ++P + +
Sbjct: 300 ARELFDKMPERNEVSWNAMLAGYVQG-ERMEMAKELF----------DVMPCRNVSTWNT 348
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
M + G + +A + KMP + D V W +++
Sbjct: 349 MITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 166/347 (47%), Gaps = 44/347 (12%)
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
+ + S + G E +V KR +W+S +I Y G A K+F EMPER
Sbjct: 69 VAISSYMRTGRCNEALRVF----KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER 124
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
++V W MI Y+ ++G R L ++ PERDV W+ ++SGY ++G + AR +FD+MP
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
++ +SWN LL+ Y + + +F+ + SWN L+GG+ + + +A + F
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES------------IGYKGNMFV 284
M V DVV + ++ ++ G +D + ++ ES GY N V
Sbjct: 245 MNVR-DVV----SWNTIITGYAQSGKIDEAR--QLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 285 G-----------------NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
NA++ Y + +E A ++F+ + R++ +WNTMI G A G
Sbjct: 298 EEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
++A +LFD+M + D V++ +++ + G + F M
Sbjct: 358 KISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+ +FDKMP+ + +W AM GYS + + + LF +M R LN + +
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR-LNRSSFSSALS 417
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A+ G+Q+H K G++ F+ AL+ MY GS+ +A +F EM +++V
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 121 WTAMISAYISCG 132
W MI+ Y G
Sbjct: 478 WNTMIAGYSRHG 489
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 121/297 (40%), Gaps = 71/297 (23%)
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
K + D+ WN ++ Y +G +VF+ MP + S+N +I GY RNG F A +
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +M E D+V W N +I Y
Sbjct: 118 FDEM-PERDLVS----------------------W-----------------NVMIKGYV 137
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+ + A ++F + RD+ SWNTM++G A +G DA S+FD+M + + V++
Sbjct: 138 RNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNA 193
Query: 354 ILSACTHMGLVRDGFLYFQS---------------MVDHYSIIPQIEHYGCM--ADLL-- 394
+LSA + + + F+S V I+ + + M D++
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 395 -------GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
++G +D+A + P++ D WT+++ ++ VE A F + E
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 313/520 (60%), Gaps = 6/520 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF+++ EPN N++ ++ +F+EM R N FT P ++++CS
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADN-FTYPFLLKACS 128
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG--DAYKVFGEMPERNVVVW 121
+ + +H K G + ++ ALI+ YS G +G DA K+F +M ER+ V W
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 188
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
+M+ + G++ RRL D P+RD++ W+ ++ GY +M A ELF+KMP R+ +
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
SW+T++ GY+ +GD+ +F++MP +NV +W ++I GYA G +A QM+
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
G + + ++++L AC+ G L +G +H + N +V NAL+DMYAKCG ++
Sbjct: 309 SG-LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
A DVFN + ++D++SWNTM++GL +HG+ +A+ LF +M+ +PD VTF+ +L +C
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
H GL+ +G YF SM Y ++PQ+EHYGC+ DLLGR G L +A+ V+ MPMEP+ VIW
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
+LLGACR H V+IA+ +L++L+P +P N+ +LSNIY W+ VA ++ M+
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 547
Query: 480 GFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
G K G S +E D + EF D+ HP+++ IY+ L L
Sbjct: 548 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 24/284 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+KMPE NT +W+ M GYS V+F +M A N T I++
Sbjct: 232 MSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK---NVVTWTIIIA 288
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV-- 118
++ G ++E +++ G K+++ +++ + G + ++ + N+
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 119 --VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
V A++ Y CG++ + + P++D+V W+ ++ G G A ELF +M
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 177 NR----DVMSWNTLLNGYANSG--DVG-----SFEKVFEEMPERNVYSWNVLIGGYARNG 225
D +++ +L ++G D G S EKV++ +P+ V + L+ R G
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ--VEHYGCLVDLLGRVG 466
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
R +A++ + M +E PN A+L AC +D+ K V
Sbjct: 467 RLKEAIKVVQTMPME----PNVVIWGALLGACRMHNEVDIAKEV 506
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 320/533 (60%), Gaps = 53/533 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVV--VLFAEMNRAAAAPLNHFTLPIV 58
+ +A K+F++MP+ N +WN + G+S ++ + ++ LF EM N FT P V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF-GEMPERN 117
+++C+K G ++EG+Q+H +A K GF + F+ + L+ MY G + DA +F + E++
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
+VV T RR D ++V+W+++I GY+ GD +AR LFDKM
Sbjct: 195 MVVMT--------------DRRKRD----GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ 236
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
R V+SWNT+++GY + NG F DA+E F++M
Sbjct: 237 RSVVSWNTMISGY-------------------------------SLNGFFKDAVEVFREM 265
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+GD+ PN TLV+VL A SRLG+L++G+W+H+YAE G + + +G+ALIDMY+KCG+
Sbjct: 266 -KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
IE A+ VF L R ++I+W+ MING A+HG DA+ F +M+ + +P V ++ +L+A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+H GLV +G YF MV + P+IEHYGCM DLLGR+GLLD+A F+ MP++PD V
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
IW +LLGACR NVE+ + L+++ P + +V LSN+Y G W +V+ +++ M+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
+ RK PGCS+I+ + + EF D+ HP+ + I L ++ LRL GY P
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 147/322 (45%), Gaps = 65/322 (20%)
Query: 159 YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG----DVGSFEKVFEEMPERNVYSW 214
+I+SG M RD ++ +L A S D+ K+F +MP+RN +SW
Sbjct: 46 FIKSGQM------------RDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 93
Query: 215 NVLIGGYARNGRFSD--ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
N +I G++ + A+ F +M+ + V PN FT +VL AC++ G + GK +H
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESA------------------------------- 301
A G+ G+ FV + L+ MY CG ++ A
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 302 -VD-------------VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+D +F+ + +R ++SWNTMI+G +++G DA+ +F +MK +P+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VT V +L A + +G + G D I + + D+ + G++++A+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG-SALIDMYSKCGIIEKAIHVF 332
Query: 408 RKMPMEPDAVIWTSLLGACRTH 429
++P E + + W++++ H
Sbjct: 333 ERLPRE-NVITWSAMINGFAIH 353
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/485 (38%), Positives = 297/485 (61%), Gaps = 2/485 (0%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF+++P P T WN + GYS + V + M R A + +T P+V++ CS G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
VR G VH + + GF + + T+ ++ Y + A KVFGEMPERN V WTA++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
AY+ G++ + + DL PER++ W+ ++ G ++SGD+V+A++LFD+MP RD++S+ ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 187 LNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN 246
++GYA GD+ S +FEE +V +W+ LI GYA+NG+ ++A + F +M + +V P+
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK-NVKPD 303
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+F +V ++ ACS++G ++ + V Y + + + +V ALIDM AKCG ++ A +F
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ +RD++S+ +M+ G+A+HG ++A+ LF++M + PD V F IL C LV
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+G YF+ M YSI+ +HY C+ +LL R G L +A ++ MP E A W SLLG
Sbjct: 424 EGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
C H N EIAE+ +HL ELEP++ ++V+LSNIY L RW DVA L+ M + G K+
Sbjct: 484 CSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKIC 543
Query: 486 GCSVI 490
G S I
Sbjct: 544 GRSWI 548
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 310/570 (54%), Gaps = 48/570 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +F MPE + TWN+M +G++ + + + FA M++ LN ++ V+
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV-LNEYSFASVLS 160
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS + +G QVH + AK F + ++ +AL++MYS G+V DA +VF EM +RNVV
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 121 WTAMISAY----------------------------------------ISCGDVGSGRRL 140
W ++I+ + I G GR +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
+ D+++ + + Y + + AR +FD MP R+V++ ++++GYA + +
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+F +M ERNV SWN LI GY +NG +AL F +L V P ++ +L AC+ L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLKRESVCPTHYSFANILKACADL 399
Query: 261 GALDMGKWVHVYAESIGYK------GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
L +G HV+ G+K ++FVGN+LIDMY KCG +E VF + RD +
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
SWN MI G A +G +AL LF +M S E+PD +T +G+LSAC H G V +G YF SM
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+ + P +HY CM DLLGRAG L++A S + +MPM+PD+VIW SLL AC+ H+N+ +
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+ + L+E+EP N +V+LSN+Y +LG+W+DV ++ +MR G K PGCS I+
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQG 639
Query: 495 SVVEFYSLDERHPETESIYRALRGLTMLLR 524
F D+ HP + I+ L L +R
Sbjct: 640 HDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 224/499 (44%), Gaps = 100/499 (20%)
Query: 47 AAPLNHFT----LPIVVRSC--SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAK 100
AA L+ FT ++ SC SK A+ VH K GF F+ LI+ YS
Sbjct: 10 AADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKC 68
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
GS+ D +VF +MP+RN+ W ++++ G + L PERD W+ ++SG+
Sbjct: 69 GSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFA 128
Query: 161 E---------------------------------SG--DM---VSARELFDKMPN-RDVM 181
+ SG DM V L K P DV
Sbjct: 129 QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVY 188
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+ L++ Y+ G+V ++VF+EM +RNV SWN LI + +NG +AL+ F QM++E
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLES 247
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFVGNALIDMYAKCGVIES 300
V P++ TL +V+ AC+ L A+ +G+ VH ++ + ++ + NA +DMYAKC I+
Sbjct: 248 RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKE 307
Query: 301 AVDVFNCLD-------------------------------RRDIISWNTMINGLAMHGNT 329
A +F+ + R+++SWN +I G +G
Sbjct: 308 ARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDGFLYFQSMVDHY 378
+ALSLF +K P +F IL AC H+ +++ GF FQS +
Sbjct: 368 EEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF-KFQSGEEDD 426
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL-LGACRTHKNVEIAEL 437
+ + D+ + G +++ RKM ME D V W ++ +G + E EL
Sbjct: 427 IFVGN-----SLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 438 AFQHLIELEPKNPANFVML 456
F+ ++E K P + M+
Sbjct: 481 -FREMLESGEK-PDHITMI 497
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 315/571 (55%), Gaps = 39/571 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+M E N +W +M GY+ + +D V LF M R N T+ V+ +C+
Sbjct: 188 ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K + GE+V+ G + N + +AL++MY ++ A ++F E N+ + A
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNA 307
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV-------------------VMWSIVISGYI---- 160
M S Y+ G + +L + V ++W GY+
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 161 -ESGDMV---------------SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
ES D + +A +FD+M N+ V++WN+++ GY +G+V + + FE
Sbjct: 368 FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
MPE+N+ SWN +I G + F +A+E F M + V + T++++ AC LGALD
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+ KW++ Y E G + ++ +G L+DM+++CG ESA+ +FN L RD+ +W I +A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
M GN A+ LFD M +PDGV FVG L+AC+H GLV+ G F SM+ + + P+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
HYGCM DLLGRAGLL++AV + MPMEP+ VIW SLL ACR NVE+A A + +
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDE 504
L P+ ++V+LSN+Y GRW D+A+++++M++ G RK PG S I+ EF S DE
Sbjct: 668 LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 505 RHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
HPE +I L ++ G+VP+L +V
Sbjct: 728 SHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 223/495 (45%), Gaps = 48/495 (9%)
Query: 1 MGHARKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ A++VF+ T +N++ GY+ + + ++LF M + +P + +T P +
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGL 141
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C+K+ A G Q+H + K G+ + F+ +L+ Y+ G + A KVF EM ERNVV
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 120 VWTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
WT+MI Y R + D + V VIS + D+ + +++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 175 MPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ N + + + L++ Y + +++F+E N+ N + Y R G +A
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L F M+ G V P+ ++++ + +CS+L + GK H Y G++ + NALID
Sbjct: 322 LGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 291 MYAKC-------------------------------GVIESAVDVFNCLDRRDIISWNTM 319
MY KC G +++A + F + ++I+SWNT+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 320 INGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
I+GL +A+ +F M++ DGVT + I SAC H+G + D + ++
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKN 499
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I + + D+ R G + A+S + D WT+ +GA N E A
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 439 FQHLIE--LEPKNPA 451
F +IE L+P A
Sbjct: 559 FDDMIEQGLKPDGVA 573
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 45/305 (14%)
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFE------KVFEEMPER-NVYSWNVLIGGY 221
R L + + DV + L+ A S ++G+ E +VFE + +N LI GY
Sbjct: 53 RSLTKQGLDNDVSTITKLV---ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGY 109
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
A +G ++A+ F +M+ G + P+ +T L AC++ A G +H +GY +
Sbjct: 110 ASSGLCNEAILLFLRMMNSG-ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+FV N+L+ YA+CG ++SA VF+ + R+++SW +MI G A DA+ LF +M
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 342 SRE-QPDGVTFVGILSACTHMGLVRDGF---------------LYFQSMVDHYSIIPQI- 384
E P+ VT V ++SAC + + G L ++VD Y I
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 385 ------EHYG--------CMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACR 427
+ YG MA R GL +A+ M + PD + S + +C
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 428 THKNV 432
+N+
Sbjct: 349 QLRNI 353
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 316/574 (55%), Gaps = 39/574 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARKVFD+M E N +W +M GY+ + +D V LF M R N T+ V+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+K + GE+V+ G + N + +AL++MY ++ A ++F E N+ +
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDV-------------------VMWSIVISGYI- 160
AM S Y+ G + +L + V ++W GY+
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 161 ----ESGDMV---------------SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
ES D + +A +FD+M N+ V++WN+++ GY +G+V + +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
FE MPE+N+ SWN +I G + F +A+E F M + V + T++++ AC LG
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
ALD+ KW++ Y E G + ++ +G L+DM+++CG ESA+ +FN L RD+ +W I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
+AM GN A+ LFD M +PDGV FVG L+AC+H GLV+ G F SM+ + +
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P+ HYGCM DLLGRAGLL++AV + MPMEP+ VIW SLL ACR NVE+A A +
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
+ L P+ ++V+LSN+Y GRW D+A+++++M++ G RK PG S I+ EF S
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 502 LDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
DE HPE +I L ++ G+VP+L +V
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 223/495 (45%), Gaps = 48/495 (9%)
Query: 1 MGHARKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ A++VF+ T +N++ GY+ + + ++LF M + +P + +T P +
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGL 141
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C+K+ A G Q+H + K G+ + F+ +L+ Y+ G + A KVF EM ERNVV
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 120 VWTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
WT+MI Y R + D + V VIS + D+ + +++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 175 MPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ N + + + L++ Y + +++F+E N+ N + Y R G +A
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L F M+ G V P+ ++++ + +CS+L + GK H Y G++ + NALID
Sbjct: 322 LGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 291 MYAKC-------------------------------GVIESAVDVFNCLDRRDIISWNTM 319
MY KC G +++A + F + ++I+SWNT+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 320 INGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
I+GL +A+ +F M++ DGVT + I SAC H+G + D + ++
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKN 499
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I + + D+ R G + A+S + D WT+ +GA N E A
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 439 FQHLIE--LEPKNPA 451
F +IE L+P A
Sbjct: 559 FDDMIEQGLKPDGVA 573
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 45/305 (14%)
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFE------KVFEEMPER-NVYSWNVLIGGY 221
R L + + DV + L+ A S ++G+ E +VFE + +N LI GY
Sbjct: 53 RSLTKQGLDNDVSTITKLV---ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGY 109
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
A +G ++A+ F +M+ G + P+ +T L AC++ A G +H +GY +
Sbjct: 110 ASSGLCNEAILLFLRMMNSG-ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+FV N+L+ YA+CG ++SA VF+ + R+++SW +MI G A DA+ LF +M
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 342 SRE-QPDGVTFVGILSACTHMGLVRDGF---------------LYFQSMVDHYSIIPQI- 384
E P+ VT V ++SAC + + G L ++VD Y I
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 385 ------EHYG--------CMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACR 427
+ YG MA R GL +A+ M + PD + S + +C
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 428 THKNV 432
+N+
Sbjct: 349 QLRNI 353
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/572 (34%), Positives = 315/572 (55%), Gaps = 44/572 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A K+F K+PEP+ WN M G+S + + V L+ M + P +H T P ++
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSH-TFPFLLN 142
Query: 61 SCSK-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ GA+ G+++HC K G N ++ AL++MYS G + A VF + +V
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVV----------------------------- 150
W MIS Y + LL + ER++V
Sbjct: 203 SWNLMISGYNRMKEYEESIELL-VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 151 -----------MWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
+ + +++ Y G+M A +F M RDV+SW +++ GY G++
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
F++MP R+ SW ++I GY R G F+++LE F++M G ++P++FT+V+VL AC+
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG-MIPDEFTMVSVLTACAH 380
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
LG+L++G+W+ Y + K ++ VGNALIDMY KCG E A VF+ +D+RD +W M
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
+ GLA +G +A+ +F QM++ QPD +T++G+LSAC H G+V +F M +
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I P + HYGCM D+LGRAGL+ +A +RKMPM P++++W +LLGA R H + +AELA
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+ ++ELEP N A + +L NIY RW+D+ ++ + D +K PG S+IE N EF
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 500 YSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ D+ H ++E IY L L Y+P+
Sbjct: 621 VAGDKSHLQSEEIYMKLEELAQESTFAAYLPD 652
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 190/413 (46%), Gaps = 48/413 (11%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAK--GSVGDAYKVFGEMPERNVVVWTAMISAYI 129
+Q+H + RG N L + ++ G V AYK+F ++PE +VVVW MI +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 130 SCGDVGSGRRL-LDLAPE---RDVVMWSIVISGYI-ESGDMVSARELFDKMPN----RDV 180
G G RL L++ E D + +++G + G + ++L + ++
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
N L+ Y+ G + VF+ + +V+SWN++I GY R + +++E +M E
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM--E 228
Query: 241 GDVV-PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
++V P TL+ VL ACS++ D+ K VH Y + ++ + NAL++ YA CG ++
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ--------------------- 338
AV +F + RD+ISW +++ G GN A + FDQ
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 339 ----------MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
M+++ PD T V +L+AC H+G + G + ++ +D I +
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGN 407
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL-LGACRTHKNVEIAELAFQ 440
+ D+ + G ++A M + D WT++ +G + E ++ FQ
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G V K+F ++PE +V WN +I G+++ + + + ML EG V P+ T +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFPFL 140
Query: 254 LLACSRLG-ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
L R G AL GK +H + G N++V NAL+ MY+ CG+++ A VF+ + D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL--Y 370
+ SWN MI+G +++ L +M+ + P VT + +LSAC+ V+D L
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDKDLCKR 257
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
V P + + + G +D AV R M D + WTS++
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERG 316
Query: 431 NVEIAELAFQHL 442
N+++A F +
Sbjct: 317 NLKLARTYFDQM 328
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 303/533 (56%), Gaps = 10/533 (1%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F PN +N++ NG+ + + LF + R L+ FT P+V+++C++A
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI-RKHGLYLHGFTFPLVLKACTRAS 125
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ + G +H + K GF + T+L+ +YS G + DA+K+F E+P+R+VV WTA+ S
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 127 AYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NR 178
Y + G + ++++++ + D V+S + GD+ S + M +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+ TL+N YA G + VF+ M E+++ +W+ +I GYA N + +E F QML
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
E ++ P+ F++V L +C+ LGALD+G+W + + N+F+ NALIDMYAKCG +
Sbjct: 306 QE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+VF + +DI+ N I+GLA +G+ + ++F Q + PDG TF+G+L C
Sbjct: 365 ARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
H GL++DG +F ++ Y++ +EHYGCM DL GRAG+LD A + MPM P+A++
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W +LL CR K+ ++AE + LI LEP N N+V LSNIY GRW + A ++ M
Sbjct: 485 WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNK 544
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
G +K+PG S IE V EF + D+ HP ++ IY L L +RL G+VP
Sbjct: 545 KGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPT 597
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 166/346 (47%), Gaps = 12/346 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD++P+ + TW A+F+GY+ + HR+ + LF +M P ++F + V+ +C
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQ-VLSACV 223
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G + GE + + + NSF+ T L+ +Y+ G + A VF M E+++V W+
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD---KMPNR-- 178
MI Y S G L + ++ I G++ S + A +L + + +R
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 179 ---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
++ N L++ YA G + +VF+EM E+++ N I G A+NG + F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
Q G + P+ T + +L C G + G ++ + + K + ++D++ +
Sbjct: 404 QTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 295 CGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQM 339
G+++ A + + R + I W +++G + +T A ++ ++
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 308/510 (60%), Gaps = 46/510 (9%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N+F +P + R S+ E ++++ G +SF+ T +++ + A ++F
Sbjct: 11 NYF-IPFLQRVKSR----NEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLF 65
Query: 111 GEMPERNVVVWTAMISAYI---------------------------------SCGDVGS- 136
++ NV ++ ++I AY SC +GS
Sbjct: 66 NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 137 --GRR----LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGY 190
G++ L P VV + +I Y++ D+V A ++FD+M RDV+SWN+LL+GY
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 191 ANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTL 250
A G + + +F M ++ + SW +I GY G + +A++ F++M + G + P++ +L
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISL 244
Query: 251 VAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
++VL +C++LG+L++GKW+H+YAE G+ V NALI+MY+KCGVI A+ +F ++
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 304
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
+D+ISW+TMI+G A HGN A+ F++M+ ++ +P+G+TF+G+LSAC+H+G+ ++G Y
Sbjct: 305 KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRY 364
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
F M Y I P+IEHYGC+ D+L RAG L++AV + MPM+PD+ IW SLL +CRT
Sbjct: 365 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
Query: 431 NVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
N+++A +A HL+ELEP++ N+V+L+NIY DLG+W+DV+RL+ +R+ +K PG S+I
Sbjct: 425 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 491 ECNDSVVEFYSLDERHPETESIYRALRGLT 520
E N+ V EF S D P I L+ T
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 42/380 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A ++F+++ PN +N++ Y+ + DV+ ++ ++ R + + FT P + +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ G+ G+QVH K G +++ ALI+MY + DA+KVF EM ER+V+
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
W +++S Y G + + L L ++ +V W+ +ISGY G V A + F +M
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 176 -PNR----------------DVMSW-----------------NTLLNGYANSGDVGSFEK 201
P+ ++ W N L+ Y+ G + +
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F +M ++V SW+ +I GYA +G A+E F +M V PN T + +L ACS +G
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVG 356
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTM 319
G ++ + + + + LID+ A+ G +E AV++ + + D W ++
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 320 INGLAMHGNTADALSLFDQM 339
++ GN AL D +
Sbjct: 417 LSSCRTPGNLDVALVAMDHL 436
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 299/517 (57%), Gaps = 37/517 (7%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
WNA+ +S + R ++L M + ++ F+L +V+++CS+ G V+ G Q+H
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVS-VDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
K G + FL LI +Y G +G + ++F MP+R+ V + +MI Y+ CG + S R
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 139 RLLDLAP----------------------------------ERDVVMWSIVISGYIESGD 164
L DL P E+D++ W+ +I GY++ G
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ A+ LFD MP RDV++W T+++GYA G V + +F++MP R+V ++N ++ GY +N
Sbjct: 268 IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN 327
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY-AESIGYKGNMF 283
+ALE F M E ++P+D TLV VL A ++LG L +H+Y E Y G
Sbjct: 328 KYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK- 386
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+G ALIDMY+KCG I+ A+ VF ++ + I WN MI GLA+HG A + Q++
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 446
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+PD +TFVG+L+AC+H GLV++G L F+ M + I P+++HYGCM D+L R+G ++ A
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+ + +MP+EP+ VIW + L AC HK E EL +HLI NP+++V+LSN+Y
Sbjct: 507 KNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASF 566
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
G W+DV R++ M++ K+PGCS IE + V EF+
Sbjct: 567 GMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 146/375 (38%), Gaps = 100/375 (26%)
Query: 4 ARKVFDKMPE--PNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVVR 60
AR++FD MP N +WN+M +GY+ T D+ LFA+M
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM------------------ 247
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
K WNS +I+ Y G + DA +F MP R+VV
Sbjct: 248 -----------------PEKDLISWNS-----MIDGYVKHGRIEDAKGLFDVMPRRDVVT 285
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W MI Y G V + L D P RDVV ++ +++GY+++ + A E+F M
Sbjct: 286 WATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 345
Query: 181 MSWN----------------------------------------TLLNGYANSGDVGSFE 200
+ + L++ Y+ G +
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAM 405
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VFE + +++ WN +IGG A +G A + Q + + P+D T V VL ACS
Sbjct: 406 LVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ-IERLSLKPDDITFVGVLNACSHS 464
Query: 261 GALDMG-------KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--DRR 311
G + G + H + + G M +D+ ++ G IE A ++ + +
Sbjct: 465 GLVKEGLLCFELMRRKHKIEPRLQHYGCM------VDILSRSGSIELAKNLIEEMPVEPN 518
Query: 312 DIISWNTMINGLAMH 326
D+I W T + + H
Sbjct: 519 DVI-WRTFLTACSHH 532
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 141/319 (44%), Gaps = 43/319 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA+ +FD+MP + +N+M GY + H + + +F++M + + + TL IV+ +
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ G + + +H ++ F L ALI+MYS GS+ A VF + +++ W
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG-DMVSARELFDKMPNRDVM 181
AMI + I G ES DM+ E P D +
Sbjct: 421 AMIGG--------------------------LAIHGLGESAFDMLLQIERLSLKP--DDI 452
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERN-----VYSWNVLIGGYARNGRFSDALEAFKQ 236
++ +LN ++SG V FE M ++ + + ++ +R+G ++E K
Sbjct: 453 TFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG----SIELAKN 508
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV--HVYAESIGYKGNMFVGNALIDMYAK 294
++ E V PND L ACS + G+ V H+ ++ GY + +V L +MYA
Sbjct: 509 LIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA-GYNPSSYV--LLSNMYAS 565
Query: 295 CGVIESAVDVFNCLDRRDI 313
G+ + V + R I
Sbjct: 566 FGMWKDVRRVRTMMKERKI 584
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 36/256 (14%)
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
+ WN +I ++ +G+ +++E V + F+L VL ACSRLG + G +H
Sbjct: 87 FLWNAVIKSHS-HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
+ + G ++F+ N LI +Y KCG + + +F+ + +RD +S+N+MI+G G
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 332 ALSLFD----QMKN----------SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
A LFD +MKN + DGV L A + + + SM+D
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFA----DMPEKDLISWNSMIDG 261
Query: 378 Y-------------SIIPQ--IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
Y ++P+ + + M D + G + A + +MP D V + S+
Sbjct: 262 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP-HRDVVAYNSM 320
Query: 423 L-GACRTHKNVEIAEL 437
+ G + ++E E+
Sbjct: 321 MAGYVQNKYHMEALEI 336
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 310/565 (54%), Gaps = 42/565 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNR--AAAAPLNHFTLPIV 58
+ ++ K+ + PN +WN G+S +E+ ++ +L+ +M R + +HFT P++
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ C+ G + K + S + A I M+++ G + +A KVF E P R++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 119 VVWTAMISAY--------------------------------ISC---GDVGSGRRLLDL 143
V W +I+ Y SC GD+ G+ +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 144 APERDVVMWSIVISG----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
E + M +++ + + GD+ AR +FD + R ++SW T+++GYA G +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
K+F++M E++V WN +IGG + R DAL F++M + P++ T++ L ACS+
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT-SNTKPDEITMIHCLSACSQ 401
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
LGALD+G W+H Y E N+ +G +L+DMYAKCG I A+ VF+ + R+ +++ +
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I GLA+HG+ + A+S F++M ++ PD +TF+G+LSAC H G+++ G YF M ++
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ PQ++HY M DLLGRAGLL++A + MPME DA +W +LL CR H NVE+ E A
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+ L+EL+P + +V+L +Y + W+D R + M + G K+PGCS IE N V EF
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
Query: 500 YSLDERHPETESIYRALRGLTMLLR 524
D+ PE+E IY L L +R
Sbjct: 642 IVRDKSRPESEKIYDRLHCLGRHMR 666
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 311/541 (57%), Gaps = 17/541 (3%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+ + +WN++ + + + ++ F+ M + + P + P +++CS + G+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS-SFPCAIKACSSLFDIFSGK 96
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
Q H A G++ + F+ +ALI MYS G + DA KVF E+P+RN+V WT+MI Y G
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 133 DVGSGRRLLD--LAPERD----VVMWSIVISGYIESGDMVSARELFDKMP--------NR 178
+ L L E D + + S+ + I + V A+ L + + +R
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 179 DVMSWNTLLNGYANSGD--VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
V NTLL+ YA G+ V K+F+++ +++ S+N ++ YA++G ++A E F++
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
++ V N TL VLLA S GAL +GK +H +G + ++ VG ++IDMY KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+E+A F+ + +++ SW MI G MHG+ A AL LF M +S +P+ +TFV +L+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC+H GL +G+ +F +M + + P +EHYGCM DLLGRAG L +A +++M M+PD+
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
+IW+SLL ACR HKNVE+AE++ L EL+ N +++LS+IY D GRW+DV R+++ M
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVA 536
++ G K PG S++E N V F DE HP+ E IY L L L GYV N V
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC 576
Query: 537 Q 537
Sbjct: 577 H 577
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 19/343 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-----NRAAAAPLNHFTLPIV 58
ARKVFD++P+ N +W +M GY L + D V LF ++ + A L+ L V
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSV 189
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYS--AKGSVGDAYKVFGEMPER 116
+ +CS+ A E +H KRGF + L++ Y+ +G V A K+F ++ ++
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 117 NVVVWTAMISAYISCGDVGSG----RRLL-DLAPERDVVMWSIVISGYIESGDMVSAREL 171
+ V + +++S Y G RRL+ + + + S V+ SG + + +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 172 FDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
D++ DV+ ++++ Y G V + K F+ M +NV SW +I GY +G
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+ ALE F M+ G V PN T V+VL ACS G G +W + G + +
Sbjct: 370 AKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
++D+ + G ++ A D+ + + D I W++++ +H N
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 299/532 (56%), Gaps = 34/532 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR++ PEP+ +N + GYS ++ + V +F EM R + F+ V+++
Sbjct: 57 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV 116
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++R G Q+HC A K G + + F+ T LI MY
Sbjct: 117 ENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGG----------------------- 153
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
CG V R++ D + ++V W+ VI+ D+ ARE+FDKM R+ S
Sbjct: 154 --------CGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS 205
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN +L GY +G++ S +++F EMP R+ SW+ +I G A NG F+++ F+++ G
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG- 264
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ PN+ +L VL ACS+ G+ + GK +H + E GY + V NALIDMY++CG + A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 303 DVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
VF + ++R I+SW +MI GLAMHG +A+ LF++M PDG++F+ +L AC+H
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
GL+ +G YF M Y I P+IEHYGCM DL GR+G L +A F+ +MP+ P A++W +
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRT 444
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
LLGAC +H N+E+AE Q L EL+P N + V+LSN Y G+W+DVA ++ +M
Sbjct: 445 LLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRI 504
Query: 482 RKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH-GYVPNL 532
+K S++E ++ +F + +++ + L+ + + L+ GY P +
Sbjct: 505 KKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEV 556
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 358 bits (918), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/579 (34%), Positives = 309/579 (53%), Gaps = 46/579 (7%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A VF +P P + +N S + R +LF + R L+ F+ ++++
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPR-ATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
SK A+ EG ++H VA K + F+ T ++MY++ G + A VF EM R+VV W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 122 TAMISAYI--------------------------------SCGDVGS---GRRLLDLAPE 146
MI Y +CG G+ R + + E
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 147 RDVVM----WSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
DV M + +++ Y +G M ARE F KM R++ +++GY+ G + + +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F++ ++++ W +I Y + +AL F++M G + P+ ++ +V+ AC+ LG
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGI 359
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
LD KWVH G + + + NALI+MYAKCG +++ DVF + RR+++SW++MIN
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
L+MHG +DALSLF +MK +P+ VTFVG+L C+H GLV +G F SM D Y+I P
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
++EHYGCM DL GRA LL +A+ + MP+ + VIW SL+ ACR H +E+ + A + +
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI 539
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSL 502
+ELEP + V++SNIY RW+DV ++ M + K G S I+ N EF
Sbjct: 540 LELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIG 599
Query: 503 DERHPETESIYRALRGLTMLLRLHGYVPN----LVDVAQ 537
D+RH ++ IY L + L+L GYVP+ LVDV +
Sbjct: 600 DKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR VFD+M + TWN M Y + LF EM + P + L +V
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILCNIVS 220
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + G +R ++ + + ++ L TAL+ MY+ G + A + F +M RN+ V
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
TAM+S Y CG + + + D ++D+V W+ +IS Y+ES A +F++M
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 177 NRDVMS------------------W-----------------NTLLNGYANSGDVGSFEK 201
DV+S W N L+N YA G + +
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VFE+MP RNV SW+ +I + +G SDAL F +M E +V PN+ T V VL CS G
Sbjct: 401 VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE-NVEPNEVTFVGVLYGCSHSG 459
Query: 262 ALDMGKWVHV-YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
++ GK + + + ++D++ + ++ A++V + +++ W ++
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 320 INGLAMHG 327
++ +HG
Sbjct: 520 MSACRIHG 527
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/455 (39%), Positives = 280/455 (61%), Gaps = 5/455 (1%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR----RLLDL 143
FL TA I S G A+ ++ ++ + S+ + SG+ +L
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKF 155
Query: 144 APERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
D + + ++ Y + GD+VSA+++FD+MP R ++S ++ YA G+V + +F
Sbjct: 156 GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ M ER++ SWNV+I GYA++G +DAL F+++L EG P++ T+VA L ACS++GAL
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+ G+W+HV+ +S + N+ V LIDMY+KCG +E AV VFN R+DI++WN MI G
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 324 AMHGNTADALSLFDQMKN-SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
AMHG + DAL LF++M+ + QP +TF+G L AC H GLV +G F+SM Y I P
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+IEHYGC+ LLGRAG L +A ++ M M+ D+V+W+S+LG+C+ H + + + ++L
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSL 502
I L KN +V+LSNIY +G ++ VA+++ M++ G K PG S IE + V EF +
Sbjct: 456 IGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAG 515
Query: 503 DERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
D H +++ IY LR ++ ++ HGYVPN V Q
Sbjct: 516 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQ 550
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
H+ +F + +P+ + A N S+ +L+ ++ + P N FT +++SC
Sbjct: 82 HSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP-NEFTFSSLLKSC 140
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S + G+ +H K G + ++ T L+++Y+ G V A KVF MPER++V T
Sbjct: 141 S----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-----PN 177
AMI+ Y G+V + R L D ERD+V W+++I GY + G A LF K+ P
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256
Query: 178 RDVMS------------------W-----------------NTLLNGYANSGDVGSFEKV 202
D ++ W L++ Y+ G + V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F + P +++ +WN +I GYA +G DAL F +M + P D T + L AC+ G
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 263 LDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMI 320
++ G + + G K + L+ + + G ++ A + ++ D + W++++
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Query: 321 NGLAMHGN 328
+HG+
Sbjct: 437 GSCKLHGD 444
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 306/543 (56%), Gaps = 23/543 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD +P P WNA+ GYS +D +++++ M A +P + FT P ++++CS
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSP-DSFTFPHLLKACS 130
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG--EMPERNVVVW 121
++ G VH + GF + F+ LI +Y+ +G A VF +PER +V W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 122 TAMISAYISCGD------VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
TA++SAY G+ + S R +D+ P D V V++ + D+ R + +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKP--DWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 176 PNRDV-------MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S NT+ YA G V + + +F++M N+ WN +I GYA+NG
Sbjct: 249 VKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+A++ F +M + DV P+ ++ + + AC+++G+L+ + ++ Y Y+ ++F+ +AL
Sbjct: 306 EAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDM+AKCG +E A VF+ RD++ W+ MI G +HG +A+SL+ M+ P+
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
VTF+G+L AC H G+VR+G+ +F M DH I PQ +HY C+ DLLGRAG LDQA ++
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
MP++P +W +LL AC+ H++VE+ E A Q L ++P N ++V LSN+Y W
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDR 543
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
VA +++ M++ G K GCS +E + F D+ HP E I R + + L+ G+
Sbjct: 544 VAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
Query: 529 VPN 531
V N
Sbjct: 604 VAN 606
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 176/363 (48%), Gaps = 15/363 (4%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC 131
+Q+H G +++ FL T LI S+ G + A +VF ++P + W A+I Y
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 132 GDVG------SGRRLLDLAPERDV---VMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
S +L ++P+ ++ + +++ G V A ++F + DV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFV 156
Query: 183 WNTLLNGYANSGDVGSFEKVFE--EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
N L+ YA +GS VFE +PER + SW ++ YA+NG +ALE F QM +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR-K 215
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
DV P+ LV+VL A + L L G+ +H +G + + +L MYAKCG + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A +F+ + ++I WN MI+G A +G +A+ +F +M N +PD ++ +SAC
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
+G + ++ V + + D+ + G ++ A V ++ D V+W+
Sbjct: 336 VGSLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWS 393
Query: 421 SLL 423
+++
Sbjct: 394 AMI 396
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K +H +G + + F+ LI + G I A VF+ L R I WN +I G + +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
+ DAL ++ M+ +R PD TF +L AC+ + ++ G + Q+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF----------VHAQVFR 147
Query: 387 YGCMADLLGRAGL---------LDQAVSFVRKMPM-EPDAVIWTSLLGA 425
G AD+ + GL L A + +P+ E V WT+++ A
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 295/543 (54%), Gaps = 28/543 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+MPE +T WN M +GY E + + + +F ++ + L+ TL ++ + +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ +R G Q+H +A K G + ++ T I +YS G + +F E + ++V + A
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 124 MISAYISCGDVG-----------SGRRL-----LDLAPERDVVMWSIVISGYIESGDMVS 167
MI Y S G+ SG RL + L P +M I GY + +S
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ L Y+ ++ S K+F+E PE+++ SWN +I GY +NG
Sbjct: 353 HASV-----------STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
DA+ F++M + + PN T+ +L AC++LGAL +GKWVH S ++ +++V A
Sbjct: 402 EDAISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LI MYAKCG I A +F+ + +++ ++WNTMI+G +HG +AL++F +M NS P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ +L AC+H GLV++G F SM+ Y P ++HY CM D+LGRAG L +A+ F+
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
M +EP + +W +LLGACR HK+ +A + L EL+P N V+LSNI+ +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
A ++ + K PG ++IE ++ F S D+ HP+ + IY L L +R G
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 528 YVP 530
Y P
Sbjct: 701 YQP 703
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 174/374 (46%), Gaps = 13/374 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR +F + P+ +N + G+S+ ES + +FA + ++ N T + +
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S R G +H A G L + +++MY V DA KVF MPE++ ++W
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189
Query: 123 AMISAY----ISCGDVGSGRRLLDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPN 177
MIS Y + + R L++ + R D ++ E ++ ++
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 178 RDVMSWNTLLNG----YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
S + +L G Y+ G + +F E + ++ ++N +I GY NG +L
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
FK++++ G + + TLV+++ G L + +H Y + + V AL +Y+
Sbjct: 310 FKELMLSGARLRSS-TLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 365
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
K IESA +F+ + + SWN MI+G +G T DA+SLF +M+ S P+ VT
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 354 ILSACTHMGLVRDG 367
ILSAC +G + G
Sbjct: 426 ILSACAQLGALSLG 439
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 177/403 (43%), Gaps = 41/403 (10%)
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ ++ Q H GF+ + L T L + S G++ A +F + +V ++
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 124 MI-------SAYISCGDVGSGRRLLDLAPERDVVMWSI-VISGYIE--SGDMVSARELFD 173
++ S + S R+ DL P ++I SG+ + +G ++ + + D
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ ++ N ++ Y V KVF+ MPE++ WN +I GY +N + ++++
Sbjct: 149 GCDSELLLGSN-IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F+ ++ E + TL+ +L A + L L +G +H A G + +V I +Y+
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG I+ +F + DI+++N MI+G +G T +LSLF ++ S + T V
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 354 ILSACTHMGLV--------RDGFLYFQS----MVDHYSIIPQIE---------------H 386
++ H+ L+ + FL S + YS + +IE
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC 426
+ M + GL + A+S R+M P+ V T +L AC
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR++FD M + N TWN M +GY L ++ + +F EM + P T V+
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP-TPVTFLCVLY 529
Query: 61 SCSKAGAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNV 118
+CS AG V+EG+++ + + + GF+ + ++++ G + A + M E
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS 589
Query: 119 VVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGD 164
VW ++ A D R +L +L P D V + +++S I S D
Sbjct: 590 SVWETLLGACRIHKDTNLARTVSEKLFELDP--DNVGYHVLLSN-IHSAD 636
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 299/533 (56%), Gaps = 12/533 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARKVFD MPE N +W A+ GY LF +M N + +++
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK-----NKVSWTVMLI 149
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ G + + +++ + + ++ T++I +G V +A ++F EM ER+V+
Sbjct: 150 GFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT 205
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WT M++ Y V R++ D+ PE+ V W+ ++ GY+++G + A ELF+ MP + V
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
++ N +++G G++ +VF+ M ERN SW +I + RNG +AL+ F M +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
G V P TL+++L C+ L +L GK VH + +++V + L+ MY KCG +
Sbjct: 326 G-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS-REQPDGVTFVGILSACT 359
+ +F+ +DII WN++I+G A HG +AL +F +M S +P+ VTFV LSAC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
+ G+V +G ++SM + + P HY CM D+LGRAG ++A+ + M +EPDA +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
SLLGACRTH +++AE + LIE+EP+N +++LSN+Y GRW DVA L+ M+
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 480 GFRKLPGCSVIECNDSVVEFYSLD-ERHPETESIYRALRGLTMLLRLHGYVPN 531
RK PGCS E + V F HPE ESI + L L LLR GY P+
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 50/330 (15%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
I S G + +A K+F +++ W +M++ Y + R+L D P+R+++ W+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWN 83
Query: 154 IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
++SGY+++G++ AR++FD MP R+V+SW L+ GY ++G V E +F +MPE+N S
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
W V++ G+ ++GR DA + + +++P+
Sbjct: 144 WTVMLIGFLQDGRIDDACKLY-------EMIPD--------------------------- 169
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
K N+ ++I K G ++ A ++F+ + R +I+W TM+ G + DA
Sbjct: 170 -----KDNI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+FD M E V++ +L G + D F+ M + P I M
Sbjct: 224 KIFDVMPEKTE----VSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVIA-CNAMISG 274
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
LG+ G + +A M DA W +++
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDAS-WQTVI 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 61/310 (19%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N + + G + K+F+ +++ SWN ++ GY N DA + F +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ N+ N L+ Y K G I+ A
Sbjct: 75 -PDR---------------------------------NIISWNGLVSGYMKNGEIDEARK 100
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ + R+++SW ++ G +G A SLF +M + V +G L G
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD----GR 156
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ D ++ + D +I +G L + G +D+A +M E + WT+++
Sbjct: 157 IDDACKLYEMIPDKDNIARTSMIHG-----LCKEGRVDEAREIFDEMS-ERSVITWTTMV 210
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
+ V+ A F + E K ++ + Y GR +D L F
Sbjct: 211 TGYGQNNRVDDARKIFDVMPE---KTEVSWTSMLMGYVQNGRIEDAEEL--------FEV 259
Query: 484 LPGCSVIECN 493
+P VI CN
Sbjct: 260 MPVKPVIACN 269
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/509 (37%), Positives = 278/509 (54%), Gaps = 30/509 (5%)
Query: 53 FTLPIVVRSCSKAGAVREGEQV-HCVAAKRGFKWNSFLC--------------------- 90
F L ++ C ++G + +V H + AK WNS L
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 91 ------TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLA 144
++ Y + A F MP ++ W MI+ Y G++ R L
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
E++ V W+ +ISGYIE GD+ A F P R V++W ++ GY + V E +F+
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 205 EMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+M +N+ +WN +I GY N R D L+ F+ ML EG + PN L + LL CS L AL
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSAL 300
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+G+ +H ++ +LI MY KCG + A +F + ++D+++WN MI+G
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
A HGN AL LF +M +++ +PD +TFV +L AC H GLV G YF+SMV Y + PQ
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+HY CM DLLGRAG L++A+ +R MP P A ++ +LLGACR HKNVE+AE A + L+
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD 503
+L +N A +V L+NIY RW+DVAR++ M+++ K+PG S IE + V F S D
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD 540
Query: 504 ERHPETESIYRALRGLTMLLRLHGYVPNL 532
HPE +SI++ L+ L ++L GY P L
Sbjct: 541 RIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 89/370 (24%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ FD+MP + A+WN M GY+ EM +A
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARR----------GEMEKAR----------------- 175
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
E + + K WN A+I Y G + A F P R VV WTA
Sbjct: 176 --------ELFYSMMEKNEVSWN-----AMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 124 MISAYISCGDVGSGRRLL-DLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
MI+ Y+ V + D+ +++V W+ +ISGY+E+ +LF M P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 177 N---------------------------------RDVMSWNTLLNGYANSGDVGSFEKVF 203
N DV + +L++ Y G++G K+F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
E M +++V +WN +I GYA++G AL F++M ++ + P+ T VAVLLAC+ G +
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLV 401
Query: 264 DMGKWVHVYAESI--GYKGNMFVGN--ALIDMYAKCGVIESAVDVFNCLD-RRDIISWNT 318
++G Y ES+ YK + ++D+ + G +E A+ + + R + T
Sbjct: 402 NIGM---AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 319 MINGLAMHGN 328
++ +H N
Sbjct: 459 LLGACRVHKN 468
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 351 bits (901), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 287/523 (54%), Gaps = 13/523 (2%)
Query: 16 TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVH 75
+ WN + + + L+ M R+ ++P + F+ P +++SC+ G+Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSP-DAFSFPFILKSCASLSLPVSGQQLH 76
Query: 76 CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN--VVVWTAMISAYISCGD 133
C K G + F+ TALI MY G V DA KVF E P+ + V + A+IS Y +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS----ARELFDKMP----NRDVMSWNT 185
V + E V + S+ + G + + R L + + +V N+
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+ Y G V + ++F+EMP + + +WN +I GY++NG D LE ++QM G V P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCP 255
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ FTLV+VL +C+ LGA +G V ES G+ N+FV NA I MYA+CG + A VF
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ + + ++SW MI MHG L LFD M +PDG FV +LSAC+H GL
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G F++M Y + P EHY C+ DLLGRAG LD+A+ F+ MP+EPD +W +LLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
C+ HKNV++AELAF +IE EP N +V++SNIY D + + R+++ MR+ FRK P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 486 GCSVIECNDSVVEFYSLDERHPETESIYRALRGL-TMLLRLHG 527
G S +E V F + D H +TE ++R L L T ++ L G
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG 538
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 37/282 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
R++FD+MP TWNA+ +GYS DV+ L+ +M + P + FTL V+ SC+
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP-DPFTLVSVLSSCA 268
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA + G +V + GF N F+ A I MY+ G++ A VF MP +++V WTA
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 124 MISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
MI Y G G L D +R D ++ +V+S SG ELF M
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR-- 386
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
E E PE ++ L+ R GR +A+E + M V
Sbjct: 387 --------------------EYKLEPGPEH----YSCLVDLLGRAGRLDEAMEFIESMPV 422
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
E P+ A+L AC +DM + +A+ I ++ N
Sbjct: 423 E----PDGAVWGALLGACKIHKNVDMAEL--AFAKVIEFEPN 458
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 297/537 (55%), Gaps = 12/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+MPE + +WN + GYS R + + M P + T+ V+ + S
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP-SFITIVSVLPAVS 247
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+++H A + GF + TAL++MY+ GS+ A ++F M ERNVV W +
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMP--- 176
MI AY+ + + + V + + G + + GD+ R K+
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVEL 366
Query: 177 --NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+R+V N+L++ Y +V + +F ++ R + SWN +I G+A+NGR DAL F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
QM V P+ FT V+V+ A + L KW+H N+FV AL+DMYAK
Sbjct: 427 SQMRSR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG I A +F+ + R + +WN MI+G HG AL LF++M+ +P+GVTF+ +
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+SAC+H GLV G F M ++YSI ++HYG M DLLGRAG L++A F+ +MP++P
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
++ ++LGAC+ HKNV AE A + L EL P + V+L+NIY+ W+ V ++++
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+M G RK PGCS++E + V F+S HP+++ IY L L ++ GYVP+
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 206/438 (47%), Gaps = 20/438 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF+ + ++ M G++ + F M P+ + +++ C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV-YNFTYLLKVCG 146
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+R G+++H + K GF + F T L MY+ V +A KVF MPER++V W
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMV---SAREL 171
+++ Y G ++ E ++ V+ ++ I G + + R
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
FD + N L++ YA G + + ++F+ M ERNV SWN +I Y +N +A+
Sbjct: 267 FDSLVNIS----TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F++ML EG V P D +++ L AC+ LG L+ G+++H + +G N+ V N+LI M
Sbjct: 323 LIFQKMLDEG-VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y KC +++A +F L R ++SWN MI G A +G DAL+ F QM++ +PD T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
V +++A + + + +V + + + D+ + G + A + M
Sbjct: 442 VSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMM 499
Query: 412 MEPDAVIWTSLLGACRTH 429
E W +++ TH
Sbjct: 500 SERHVTTWNAMIDGYGTH 517
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 172/335 (51%), Gaps = 19/335 (5%)
Query: 49 PLNHFTLP--IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDA 106
P N + P +++ CS +++E Q+ + K G F T L+ ++ GSV +A
Sbjct: 32 PANVYEHPAALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEA 88
Query: 107 YKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYI 160
+VF + + V++ M+ + D+ + D+ P + + + G
Sbjct: 89 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG-- 146
Query: 161 ESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
+ ++ +E+ + D+ + L N YA V KVF+ MPER++ SWN
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
++ GY++NG ALE K M E ++ P+ T+V+VL A S L + +GK +H YA
Sbjct: 207 IVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G+ + + AL+DMYAKCG +E+A +F+ + R+++SWN+MI+ + N +A+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 337 DQMKNSREQPDGVTFVGILSACTHMG-LVRDGFLY 370
+M + +P V+ +G L AC +G L R F++
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 11/297 (3%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ + G V +VFE + + ++ ++ G+A+ AL+ F +M + DV P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEP 133
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ +L C L +GK +H G+ ++F L +MYAKC + A VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ + RD++SWNT++ G + +G AL + M +P +T V +L A + + L+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 366 DGF-LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
G ++ +M + + I + D+ + G L+ A M +E + V W S++
Sbjct: 254 VGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYK-----DLGRWQDVARLKIAM 476
A ++N + A L FQ +++ E P + ++ ++ DL R + + +L + +
Sbjct: 311 AYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 285/528 (53%), Gaps = 27/528 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD++PE N N M Y + + V +F M P +H+T P V+++CS
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP-DHYTFPCVLKACS 151
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+G + G ++H A K G F+ L+ MY G + +A V EM R+VV W +
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
++ Y + + D A E M S+ IS ++G M S +VM
Sbjct: 212 LVVGY-------AQNQRFDDALEVCREMESVKISH--DAGTMASLLPAVSNTTTENVM-- 260
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+ +F +M ++++ SWNV+IG Y +N +A+E + +M +G
Sbjct: 261 --------------YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-F 305
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ ++ +VL AC AL +GK +H Y E N+ + NALIDMYAKCG +E A D
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF + RD++SW MI+ G DA++LF ++++S PD + FV L+AC+H GL
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ +G F+ M DHY I P++EH CM DLLGRAG + +A F++ M MEP+ +W +LL
Sbjct: 426 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
GACR H + +I LA L +L P+ +V+LSNIY GRW++V ++ M+ G +K
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 484 LPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
PG S +E N + F D HP+++ IYR L L ++ GYVP+
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD 593
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 145/366 (39%), Gaps = 66/366 (18%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNH-----FTL 55
+ AR V D+M + +WN++ GY+ + D + + EM + ++H +L
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME---SVKISHDAGTMASL 247
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTAL--------IEMYS---AKGSVG 104
V + + + + + K WN + + +E+YS A G
Sbjct: 248 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 105 DAYKVFGEMP------------------ER-----NVVVWTAMISAYISCGDVGSGRRLL 141
DA + +P ER N+++ A+I Y CG + R +
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 142 DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVG 197
+ RDVV W+ +IS Y SG A LF K+ + D +++ T L +++G +
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 198 SFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVA 252
F+ M + + ++ R G+ +A + M +E PN+ A
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME----PNERVWGA 483
Query: 253 VLLAC-----SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
+L AC + +G L K + E GY +V L ++YAK G E ++ N
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGY----YV--LLSNIYAKAGRWEEVTNIRNI 537
Query: 308 LDRRDI 313
+ + +
Sbjct: 538 MKSKGL 543
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 345 bits (886), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 292/535 (54%), Gaps = 9/535 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+M E + +WN++ NGY + +F +M + ++ T+ V C+
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCA 307
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G VH + K F C L++MYS G + A VF EM +R+VV +T+
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 124 MISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
MI+ Y G G +L + E DV + V++ + + + + + D
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 180 ----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ N L++ YA G + E VF EM +++ SWN +IGGY++N ++AL F
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+L E P++ T+ VL AC+ L A D G+ +H Y GY + V N+L+DMYAKC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + A +F+ + +D++SW MI G MHG +A++LF+QM+ + + D ++FV +L
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+H GLV +G+ +F M I P +EHY C+ D+L R G L +A F+ MP+ PD
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A IW +LL CR H +V++AE + + ELEP+N +V+++NIY + +W+ V RL+
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKR 727
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
+ G RK PGCS IE V F + D +PETE+I LR + + GY P
Sbjct: 728 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 230/468 (49%), Gaps = 44/468 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +VFD++ WN + N + + + LF +M ++ ++ +T V +
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSK 203
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
S S +V GEQ+H K GF + + +L+ Y V A KVF EM ER+V+
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 121 WTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSAREL----F 172
W ++I+ Y+S G G ++L E D+ V +G +S + R +
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+R+ NTLL+ Y+ GD+ S + VF EM +R+V S+ +I GYAR G +A++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M EG + P+ +T+ AVL C+R LD GK VH + + ++FV NAL+DMY
Sbjct: 384 LFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD-QMKNSREQPDGVTF 351
AKCG ++ A VF+ + +DIISWNT+I G + + +ALSLF+ ++ R PD T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 352 VGILSACT-----------HMGLVRDGFL----YFQSMVDHYSII--------------- 381
+L AC H ++R+G+ S+VD Y+
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSF---VRKMPMEPDAVIWTSLLGAC 426
+ + M G G +A++ +R+ +E D + + SLL AC
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y N GD+ +VF+E+ WN+L+ A++G FS ++ FK+M+ G V + +T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYT 197
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
V + S L ++ G+ +H + G+ VGN+L+ Y K ++SA VF+ +
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
RD+ISWN++ING +G LS+F QM S + D T V + + C L+ G
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 370 ---------------YFQSMVDHYSIIPQIE---------------HYGCMADLLGRAGL 399
+ +++D YS ++ Y M R GL
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 400 LDQAVSFVRKMPME---PDAVIWTSLLGACRTHK 430
+AV +M E PD T++L C ++
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 45/257 (17%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A VF +M + +WN + GYS + + LF + + T+ V+
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A +G ++H + G+ + + +L++MY+ G++ A+ +F ++ +++V
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 121 WTAMISAY--------------------------------ISC---GDVGSGRRLLDL-- 143
WT MI+ Y +C G V G R ++
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 144 ---APERDVVMWSIVISGYIESGDMVSARELFDKMP-NRDVMSWNTLLNGYANSGDV--- 196
E V ++ ++ +GD++ A + MP D W LL G DV
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 197 -GSFEKVFEEMPERNVY 212
EKVFE PE Y
Sbjct: 688 EKVAEKVFELEPENTGY 704
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG--DVVPNDFTLVAVLLACSRLGALDM 265
+R+V N + + +G +A+ K + V G D+ P TL +VL C+ +L
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAV---KLLCVSGKWDIDPR--TLCSVLQLCADSKSLKD 112
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
GK V + G+ + +G+ L MY CG ++ A VF+ + + WN ++N LA
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
G+ + ++ LF +M +S + D TF + + + + V G
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 345 bits (886), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 303/542 (55%), Gaps = 18/542 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+AR +FD+MP + +WNAM +GY + + ++ + L + ++ T+ ++
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR-----AMDSVTVVSLLS 255
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++AG G +H + K G + F+ LI++Y+ G + D KVF M R+++
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 121 WTAMISAY------ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
W ++I AY + + RL + P D + + S + GD+ + R +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQP--DCLTLISLASILSQLGDIRACRSVQGF 373
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ D+ N ++ YA G V S VF +P +V SWN +I GYA+NG S+
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+E + M EG++ N T V+VL ACS+ GAL G +H G ++FV +L
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMY KCG +E A+ +F + R + + WNT+I HG+ A+ LF +M + +PD +
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TFV +LSAC+H GLV +G F+ M Y I P ++HYGCM D+ GRAG L+ A+ F++
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
M ++PDA IW +LL ACR H NV++ ++A +HL E+EP++ V+LSN+Y G+W+ V
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGV 673
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++ G RK PG S +E ++ V FY+ ++ HP E +YR L L L++ GYV
Sbjct: 674 DEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYV 733
Query: 530 PN 531
P+
Sbjct: 734 PD 735
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 247/476 (51%), Gaps = 20/476 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR FD + + WN M +GY + +V+ F+ ++ ++ T P V+++C
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR 164
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V +G ++HC+A K GF W+ ++ +LI +YS +VG+A +F EMP R++ W A
Sbjct: 165 ---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 221
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM-----VSARELFDKMPNR 178
MIS Y G+ L + D V ++S E+GD + + + + +
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+S N L++ YA G + +KVF+ M R++ SWN +I Y N + A+ F++M
Sbjct: 282 LFVS-NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG-YKGNMFVGNALIDMYAKCGV 297
+ + P+ TL+++ S+LG + + V + G + ++ +GNA++ MYAK G+
Sbjct: 341 LS-RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILS 356
++SA VFN L D+ISWNT+I+G A +G ++A+ +++ M+ E + T+V +L
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC+ G +R G ++ + + + +AD+ G+ G L+ A+S ++P ++
Sbjct: 460 ACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNS 517
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYK----DLGRW 466
V W +L+ H + E A + F+ +++ ++P + +LS D G+W
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 13/307 (4%)
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
++S + AR + K +S L+N Y G+V F+ + R+VY+WN++I
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCIS-AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
GY R G S+ + F ++ + P+ T +VL AC + +D G +H A G+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--ID-GNKIHCLALKFGFM 182
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
+++V +LI +Y++ + +A +F+ + RD+ SWN MI+G GN +AL+L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---- 238
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
N D VT V +LSACT G G + H + ++ + DL G
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH-GLESELFVSNKLIDLYAEFGR 297
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH--LIELEPKNPANFVMLS 457
L +M + D + W S++ A ++ A FQ L ++P + + L+
Sbjct: 298 LRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLA 355
Query: 458 NIYKDLG 464
+I LG
Sbjct: 356 SILSQLG 362
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 173/403 (42%), Positives = 252/403 (62%), Gaps = 6/403 (1%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
++L ++D + + +++ Y GD+ SA+ +FD ++D+ +WN+++N YA +G +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV----EGDVVPNDFTLVAVL 254
K+F+EMPERNV SW+ LI GY G++ +AL+ F++M + E V PN+FT+ VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDI 313
AC RLGAL+ GKWVH Y + + ++ +G ALIDMYAKCG +E A VFN L ++D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+++ MI LAM+G T + LF +M S P+ VTFVGIL AC H GL+ +G YF+
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
M++ + I P I+HYGCM DL GR+GL+ +A SF+ MPMEPD +IW SLL R ++
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 433 EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIEC 492
+ E A + LIEL+P N +V+LSN+Y GRW +V ++ M G K+PGCS +E
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 493 NDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
V EF DE E+E IY L + LR GYV + +V
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEV 489
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 159/361 (44%), Gaps = 53/361 (14%)
Query: 19 WN----AMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
WN A+ + S + H + V + M +P H T P ++ S + G++
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISV-YLRMRNHRVSPDFH-TFPFLLPSFHNPLHLPLGQRT 84
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H G + F+ T+L+ MYS+ G + A +VF + +++ W ++++AY G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 135 GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-----------PNRDVMS- 182
R+L D PER+V+ WS +I+GY+ G A +LF +M PN MS
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 183 ---------------W-----------------NTLLNGYANSGDVGSFEKVFEEM-PER 209
W L++ YA G + ++VF + ++
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-W 268
+V +++ +I A G + + F +M ++ PN T V +L AC G ++ GK +
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHG 327
+ E G ++ ++D+Y + G+I+ A + D++ W ++++G M G
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 328 N 328
+
Sbjct: 385 D 385
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 52/289 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-----NRAAAAPLNHFTLPIV 58
ARK+FD+MPE N +W+ + NGY + +++ + LF EM N A P N FT+ V
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP-NEFTMSTV 205
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM-PERN 117
+ +C + GA+ +G+ VH K + + L TALI+MY+ GS+ A +VF + +++
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 118 VVVWTAMI------------------------------------SAYISCGDVGSGRRLL 141
V ++AMI A + G + G+
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 142 DLAPERDVVMWSI-----VISGYIESGDMVSARELFDKMP-NRDVMSWNTLLNGYANSGD 195
+ E + SI ++ Y SG + A MP DV+ W +LL+G GD
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 196 VGSFE---KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+ + E K E+ N ++ +L YA+ GR+ + +M V+G
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 212 YSWNVLIGGYARN---GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+ WN++I N + + + +M V P+ T +L + L +G+
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMR-NHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKC-------------------------------GV 297
H G + FV +L++MY+ C G+
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-----QPDGVTFV 352
I+ A +F+ + R++ISW+ +ING M G +AL LF +M+ + +P+ T
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+LSAC +G + G + + +D Y + I + D+ + G L++A +
Sbjct: 204 TVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 413 EPDAVIWTSLL 423
+ D +++++
Sbjct: 263 KKDVKAYSAMI 273
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 299/533 (56%), Gaps = 36/533 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +M EPN +NA+F G+ + L+ M R + +P + +T +V++ S
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSP-SSYTYSSLVKASS 882
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A R GE + K GF ++ + T LI+ YSA
Sbjct: 883 FAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSA------------------------ 916
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
G + R++ D PERD + W+ ++S Y DM SA L ++M ++ +
Sbjct: 917 -------TGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+NGY G++ E +F +MP +++ SW +I GY++N R+ +A+ F +M+ EG +
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-I 1028
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+P++ T+ V+ AC+ LG L++GK VH+Y G+ ++++G+AL+DMY+KCG +E A+
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF L ++++ WN++I GLA HG +AL +F +M+ +P+ VTFV + +ACTH GL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
V +G ++SM+D YSI+ +EHYG M L +AGL+ +A+ + M EP+AVIW +LL
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
CR HKN+ IAE+AF L+ LEP N + +L ++Y + RW+DVA ++ MR+ G K
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 484 L-PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
+ PG S I + F + D+ H ++ + L + + L GYV +V
Sbjct: 1269 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 293/520 (56%), Gaps = 42/520 (8%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
TL V+RSC V +H + ++F+ LI + S SV AY VF +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG--------------- 158
NV ++TAMI ++S G G L V+ + VI+
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 159 --------------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
Y +SG++V+A+++FD+MP+RD ++ ++N Y+ G +
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++F+++ ++ W +I G RN + ALE F++M +E +V N+FT V VL ACS
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACS 266
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
LGAL++G+WVH + E+ + + FVGNALI+MY++CG I A VF + +D+IS+NT
Sbjct: 267 DLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNT 326
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
MI+GLAMHG + +A++ F M N +P+ VT V +L+AC+H GL+ G F SM +
Sbjct: 327 MISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVF 386
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
++ PQIEHYGC+ DLLGR G L++A F+ +P+EPD ++ +LL AC+ H N+E+ E
Sbjct: 387 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 446
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
+ L E E + +V+LSN+Y G+W++ ++ +MRD+G K PGCS IE ++ + E
Sbjct: 447 AKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHE 506
Query: 499 FYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQG 538
F D HP E+IY+ L+ L +LR + N +D+ G
Sbjct: 507 FLVGDIAHPHKEAIYQRLQELNRILR---FKENQIDIIMG 543
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 49/277 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F + +T W AM +G + + LF EM + N FT V+ +CS
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA-NEFTAVCVLSACS 266
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ G VH + + ++F+ ALI MYS G + +A +VF M +++V+ +
Sbjct: 267 DLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNT 326
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----D 179
M ISG G V A F M NR +
Sbjct: 327 M-------------------------------ISGLAMHGASVEAINEFRDMVNRGFRPN 355
Query: 180 VMSWNTLLNGYANSG--DVG-----SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
++ LLN ++ G D+G S ++VF P+ + + ++ R GR +A
Sbjct: 356 QVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQ--IEHYGCIVDLLGRVGRLEEAYR 413
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
+ + +E P+ L +L AC G +++G+ +
Sbjct: 414 FIENIPIE----PDHIMLGTLLSACKIHGNMELGEKI 446
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 285/525 (54%), Gaps = 68/525 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEM--NRAAAAPLNHFTLPI 57
+ +AR +FD+ PNT + A+ YS + H F + NR+ P NHF P+
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRP-NHFIYPL 131
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
V++S + VH K GF +Y
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGF-----------HLY-------------------- 160
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
VVV TA++ +Y S + AR+LFD+M
Sbjct: 161 VVVQTALLHSYAS------------------------------SVSHITLARQLFDEMSE 190
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
R+V+SW +L+GYA SGD+ + +FE+MPER+V SWN ++ +NG F +A+ F++M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ E + PN+ T+V VL AC++ G L + K +H +A ++FV N+L+D+Y KCG
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN---SREQPDGVTFVGI 354
+E A VF ++ + +WN+MIN A+HG + +A+++F++M + +PD +TF+G+
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+ACTH GLV G YF M + + I P+IEHYGC+ DLLGRAG D+A+ + M M+
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D IW SLL AC+ H ++++AE+A ++L+ L P N M++N+Y ++G W++ R +
Sbjct: 431 DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARK 490
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
++ K PG S IE ++ V +FYSLD+ HPETE IY L L
Sbjct: 491 MIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 275/489 (56%), Gaps = 8/489 (1%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T +++ C AV EG + G + FL LI MY + DA+++F +M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD-MVSAREL- 171
P+RNV+ WT MISAY C LL L +V S + S + M R L
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLH 182
Query: 172 ---FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ DV + L++ +A G+ VF+EM + WN +IGG+A+N R
Sbjct: 183 CGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
ALE FK+M G + TL +VL AC+ L L++G HV+ + Y ++ + NAL
Sbjct: 243 VALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNAL 299
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+DMY KCG +E A+ VFN + RD+I+W+TMI+GLA +G + +AL LF++MK+S +P+
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+T VG+L AC+H GL+ DG+ YF+SM Y I P EHYGCM DLLG+AG LD AV +
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
+M EPDAV W +LLGACR +N+ +AE A + +I L+P++ + +LSNIY + +W
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
V ++ MRD G +K PGCS IE N + F D HP+ + + L L L GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 529 VPNLVDVAQ 537
VP V Q
Sbjct: 540 VPETNFVLQ 548
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 77/368 (20%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A ++FD+MP+ N +W M + YS + H+ + L M R P N +T V+R
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP-NVYTYSSVLR 170
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ VR +HC K G + + F+ +ALI++++ G DA VF EM + +V
Sbjct: 171 SCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 121 WTAMISAYI--SCGDVG--------------------------SGRRLLDLAPE------ 146
W ++I + S DV +G LL+L +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 147 ---RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
+D+++ + ++ Y + G + A +F++M RDV++W+T+++G
Sbjct: 288 KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG-------------- 333
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
A+NG +AL+ F++M G PN T+V VL ACS G L
Sbjct: 334 -----------------LAQNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLL 375
Query: 264 DMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMI 320
+ G W + + Y + + +ID+ K G ++ AV + N ++ D ++W T++
Sbjct: 376 EDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 321 NGLAMHGN 328
+ N
Sbjct: 435 GACRVQRN 442
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 304/557 (54%), Gaps = 46/557 (8%)
Query: 11 MPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVRE 70
+ P+ +N M + +S V+ LF E+ P ++FTLP+V++S + V E
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYP-DNFTLPVVLKSIGRLRKVIE 64
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
GE+VH A K G +++S++ +L+ MY++ G + +KVF EMP+R+VV W +IS+Y+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 131 CG--------------------DVGS----------------GRRLLDLAP---ERDVVM 151
G D G+ G R+ E V +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 152 WSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
+ ++ + + G + AR +FD M +++V W +++ GY ++G + +FE P ++V
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
W ++ GY + RF +ALE F+ M G + P++F LV++L C++ GAL+ GKW+H
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
Y + VG AL+DMYAKCG IE+A++VF + RD SW ++I GLAM+G +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL L+ +M+N + D +TFV +L+AC H G V +G F SM + +++ P+ EH C+
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAV---IWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
DLL RAGLLD+A + KM E D ++ SLL A R + NV+IAE + L ++E
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 449 NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDE--RH 506
+ + +L+++Y RW+DV ++ M+D G RK PGCS IE + EF D+ H
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Query: 507 PETESIYRALRGLTMLL 523
P+ + I L T L+
Sbjct: 544 PKMDEINSMLHQTTNLM 560
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 42/341 (12%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
KVFD+MP+ + +WN + + Y D + +F M++ + + T+ + +CS
Sbjct: 102 KVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSAL 161
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ GE+++ F+ + + AL++M+ G + A VF M ++NV WT+M+
Sbjct: 162 KNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM---------- 175
Y+S G + R L + +P +DVV+W+ +++GY++ A ELF M
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 176 --------------------------PNR---DVMSWNTLLNGYANSGDVGSFEKVFEEM 206
NR D + L++ YA G + + +VF E+
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
ER+ SW LI G A NG AL+ + +M G V + T VAVL AC+ G + G
Sbjct: 341 KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEG 399
Query: 267 KWV-HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
+ + H E + + LID+ + G+++ A ++ +
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 48/282 (17%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
AR +F++ P + W AM NGY + + LF M A P ++F L ++ C
Sbjct: 231 EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP-DNFVLVSLLTGC 289
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ GA+ +G+ +H + + + TAL++MY+ G + A +VF E+ ER+ WT
Sbjct: 290 AQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWT 349
Query: 123 AMI--------------------------------SAYISC---GDVGSGRRLLDLAPER 147
++I + +C G V GR++ ER
Sbjct: 350 SLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Query: 148 DVVM-----WSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNGYANSGDVGS 198
V S +I +G + A EL DKM V + +LL+ N G+V
Sbjct: 410 HNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKI 469
Query: 199 FEKVFEEMPERNV---YSWNVLIGGYARNGRFSDALEAFKQM 237
E+V E++ + V + +L YA R+ D ++M
Sbjct: 470 AERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 511
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 289/528 (54%), Gaps = 16/528 (3%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
N WN M Y L + R+ +F +M P N +T P ++++C + G + GEQ+
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP-NQYTYPSILKTCIRLGDLELGEQI 512
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG-- 132
H K F+ N+++C+ LI+MY+ G + A+ + ++VV WT MI+ Y
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 133 --DVGSGRRLLDLAPERDVVMWSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNT 185
+ + R++LD D V + +S ++ G + A+ + D+ N
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS-DLPFQNA 631
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L+ Y+ G + FE+ + +WN L+ G+ ++G +AL F +M EG +
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDN 690
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
N+FT + + A S + GK VH GY V NALI MYAKCG I A F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ ++ +SWN +IN + HG ++AL FDQM +S +P+ VT VG+LSAC+H+GLV
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G YF+SM Y + P+ EHY C+ D+L RAGLL +A F+++MP++PDA++W +LL A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW--QDVARLKIAMRDTGFRK 483
C HKN+EI E A HL+ELEP++ A +V+LSN+Y +W +D+ R K M++ G +K
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK--MKEKGVKK 928
Query: 484 LPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
PG S IE +S+ FY D+ HP + I+ + LT GYV +
Sbjct: 929 EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 214/456 (46%), Gaps = 25/456 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MPE TWN M + +V LF M P N T V+ +C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP-NEGTFSGVLEAC- 196
Query: 64 KAGAVREG--EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ G+V EQ+H +G + ++ +C LI++YS G V A +VF + ++ W
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----- 176
AMIS RL ++ S + + + + E+ +++
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 177 ---NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ D N L++ Y + G++ S E +F M +R+ ++N LI G ++ G A+E
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
FK+M ++G + P+ TL ++++ACS G L G+ +H Y +G+ N + AL+++YA
Sbjct: 377 FKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KC IE+A+D F + +++ WN M+ + + ++ +F QM+ P+ T+
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIP---QIEHYGC--MADLLGRAGLLDQAVSFVR 408
IL C +G + G H II Q+ Y C + D+ + G LD A +
Sbjct: 496 ILKTCIRLGDLELGEQI------HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ + D V WT+++ + + A F+ +++
Sbjct: 550 RFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 51 NHFTLPIVVRSCSKA-GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
NH TL ++ C K G++ EG ++H K G N L L + Y KG + A+KV
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 110 FGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG------ 163
F EMPER + W MI S +G L +V SG +E+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 164 ----DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ + AR L+ + + V+ N L++ Y+ +G V +VF+ + ++ SW +I
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
G ++N ++A+ F M V G ++P + +VL AC ++ +L++G+ +H +G+
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
+ +V NAL+ +Y G + SA +F+ + +RD +++NT+INGL+ G A+ LF +M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 340 KNSREQPDGVTFVGILSACTHMG-LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
+PD T ++ AC+ G L R L+ + ++ +IE G + +L +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCA 438
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGA 425
++ A+ + + +E + V+W +L A
Sbjct: 439 DIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
F++ + WNA+ +G+ + ++ + + +F MNR N+FT V++ S+
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN-NNFTFGSAVKAASETAN 707
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+++G+QVH V K G+ + +C ALI MY+ GS+ DA K F E+ +N V W A+I+A
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 128 YISCG 132
Y G
Sbjct: 768 YSKHG 772
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K F ++ N +WNA+ N YS + + F +M + P NH TL V+ +CS
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP-NHVTLVGVLSACS 804
Query: 64 KAGAVREG-EQVHCVAAKRGF--KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVV 119
G V +G + ++ G K ++C +++M + G + A + EMP + + +
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVC--VVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 120 VWTAMISAYISCGDVGSGR----RLLDLAPE 146
VW ++SA + ++ G LL+L PE
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 296/586 (50%), Gaps = 58/586 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARKVFD+M + +WN++ Y+ + + +F+ M ++ TL V+
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ G G+Q+HC A N F+ L++MY+ G + +A VF M ++VV
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKM- 175
W AM++ Y G RL + E DVV WS ISGY + G A + +M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 176 -----PNR----------------------------------------DVMSWNTLLNGY 190
PN + M N L++ Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 191 ANSGDVGSFEKVFEEM--PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPND 247
A V + +F+ + ER+V +W V+IGGY+++G + ALE +M E PN
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN---MFVGNALIDMYAKCGVIESAVDV 304
FT+ L+AC+ L AL +GK +H YA + + N +FV N LIDMYAKCG I A V
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYA--LRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + ++ ++W +++ G MHG +AL +FD+M+ + DGVT + +L AC+H G++
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
G YF M + + P EHY C+ DLLGRAG L+ A+ + +MPMEP V+W + L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
CR H VE+ E A + + EL + ++ +LSN+Y + GRW+DV R++ MR G +K
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
PGCS +E F+ D+ HP + IY+ L ++ GYVP
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVP 761
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 228/481 (47%), Gaps = 62/481 (12%)
Query: 1 MGHARKVFDKMPEPNTAT--WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
+ HA + + P + WN++ Y + LF M+ + P N +T P V
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDN-YTFPFV 133
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++C + +VR GE H ++ GF N F+ AL+ MYS S+ DA KVF EM +V
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 119 VVWTAMISAYIS---------------------------------CGDVGS---GRRLLD 142
V W ++I +Y C +G+ G++L
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 143 LAPERDVV----MWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD--- 195
A +++ + + ++ Y + G M A +F M +DV+SWN ++ GY+ G
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 196 -VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
V FEK+ EE + +V +W+ I GYA+ G +AL +QML G + PN+ TL++VL
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVL 372
Query: 255 LACSRLGALDMGKWVHVYA-------ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
C+ +GAL GK +H YA G+ V N LIDMYAKC +++A +F+
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 308 LD--RRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVGILSACTHMGL 363
L RD+++W MI G + HG+ AL L +M ++ + +P+ T L AC +
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 364 VRDGF-LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+R G ++ ++ + + +P C+ D+ + G + A M M + V WTSL
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSL 550
Query: 423 L 423
+
Sbjct: 551 M 551
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 181/426 (42%), Gaps = 62/426 (14%)
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVV--WTAMISAYISCGDVGSGRRLLDL--- 143
L + LI Y + G + A + P + V W ++I +Y GD G + L L
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY---GDNGCANKCLYLFGL 117
Query: 144 ------APERDVVMWSIVISGYIES---GDMVSARELFDKMPNRDVMSWNTLLNGYANSG 194
P+ + G I S G+ A L + +V N L+ Y+
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS-NVFVGNALVAMYSRCR 176
Query: 195 DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
+ KVF+EM +V SWN +I YA+ G+ ALE F +M E P++ TLV VL
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
C+ LG +GK +H +A + NMFVGN L+DMYAKCG+++ A VF+ + +D++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 315 SWNTMINGLAMHGNTADALSLFD-----------------------------------QM 339
SWN M+ G + G DA+ LF+ QM
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG-------CMAD 392
+S +P+ VT + +LS C +G + G Y I + +G + D
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHG-KEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 393 LLGRAGLLDQAVSFVRKM-PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
+ + +D A + + P E D V WT ++G H + A + E + +
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 452 NFVMLS 457
N +S
Sbjct: 476 NAFTIS 481
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 304/571 (53%), Gaps = 52/571 (9%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
F + P W ++ ++ + F EM + P +H P V++SC+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCP-DHNVFPSVLKSCTMMMD 120
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYS------AKGSVGDAYKVFGEMPERNVVVW 121
+R GE VH + G + + AL+ MY+ +K SVG+ VF EMP+R
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN---VFDEMPQRTSNSG 177
Query: 122 TAMISAYISCGDVG--SGRRLLDLAPERDVVMWSIVISGYIESG---------------- 163
+ A G S RR+ ++ P +DVV ++ +I+GY +SG
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 164 -------------------DMVSAREL----FDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
D++ +E+ K + DV ++L++ YA S + E
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+VF + R+ SWN L+ GY +NGR+++AL F+QM V V P +V+ AC+ L
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHL 356
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
L +GK +H Y G+ N+F+ +AL+DMY+KCG I++A +F+ ++ D +SW +I
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
G A+HG+ +A+SLF++MK +P+ V FV +L+AC+H+GLV + + YF SM Y +
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
++EHY +ADLLGRAG L++A +F+ KM +EP +W++LL +C HKN+E+AE +
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
+ ++ +N +V++ N+Y GRW+++A+L++ MR G RK P CS IE + F
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 596
Query: 501 SLDERHPETESIYRALRGLTMLLRLHGYVPN 531
S D HP + I L+ + + GYV +
Sbjct: 597 SGDRSHPSMDKINEFLKAVMEQMEKEGYVAD 627
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 166/336 (49%), Gaps = 16/336 (4%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R+VF+ MP + ++N + GY+ + + D + + EM P + FTL V+ S+
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP-DSFTLSSVLPIFSE 254
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
V +G+++H ++G + ++ ++L++MY+ + D+ +VF + R+ + W ++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP-------- 176
++ Y+ G RL V ++ S I + ++ L ++
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
++ + L++ Y+ G++ + K+F+ M + SW +I G+A +G +A+ F++
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAK 294
M +G V PN VAVL ACS +G +D W + + + Y N + + A+ D+ +
Sbjct: 435 MKRQG-VKPNQVAFVAVLTACSHVGLVDEA-WGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 295 CGVIESAVDVFN--CLDRRDIISWNTMINGLAMHGN 328
G +E A + + C++ + W+T+++ ++H N
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSV-WSTLLSSCSVHKN 527
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 78/330 (23%)
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
S + +++ Y N + +F+ + V +W +I + FS AL +F +M G
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK------- 294
P+ +VL +C+ + L G+ VH + +G +++ GNAL++MYAK
Sbjct: 101 RC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 295 --------------------------CGV---IESAVDVFNCLDRRDIISWNTMINGLAM 325
C + I+S VF + R+D++S+NT+I G A
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACT-----------HMGLVRDGF---LYF 371
G DAL + +M + +PD T +L + H ++R G +Y
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 372 -QSMVDHYSIIPQIEHYG-CMADLLGRAGL--------------LDQAVSFVRKM---PM 412
S+VD Y+ +IE + L R G+ ++A+ R+M +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+P AV ++S++ AC A LA HL
Sbjct: 340 KPGAVAFSSVIPAC--------AHLATLHL 361
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 54/306 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+ +VF ++ + +WN++ GY + + + LF +M A P V+ +C+
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP-GAVAFSSVIPACA 354
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+Q+H + GF N F+ +AL++MYS G++ A K+F M NV+
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM---NVL---- 407
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV--- 180
D V W+ +I G+ G A LF++M + V
Sbjct: 408 ------------------------DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 181 -MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA-------RNGRFSDALE 232
+++ +L ++ G V F M + VY N + YA R G+ +A
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTK--VYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY--KGNMFVGNALID 290
+M VE P +L +CS L++ + V AE I NM + +
Sbjct: 502 FISKMCVE----PTGSVWSTLLSSCSVHKNLELAEKV---AEKIFTVDSENMGAYVLMCN 554
Query: 291 MYAKCG 296
MYA G
Sbjct: 555 MYASNG 560
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 286/531 (53%), Gaps = 72/531 (13%)
Query: 2 GHAR---KVFDKMPEPNTATWNAMFNGYSLTE---SHRDVVVLFAEMNRAAAAPLNHFTL 55
GH R VF P PNT N M SL + +H + ++ ++ A P + FT
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKP-DTFTF 119
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
P V++ + V G Q+H GF + + T LI+M
Sbjct: 120 PFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM------------------- 160
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
Y SCG +G AR++FD+M
Sbjct: 161 ------------YFSCGGLGD-------------------------------ARKMFDEM 177
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEA 233
+DV WN LL GY G++ + E MP RN SW +I GYA++GR S+A+E
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++ML+E +V P++ TL+AVL AC+ LG+L++G+ + Y + G + + NA+IDMYA
Sbjct: 238 FQRMLME-NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
K G I A+DVF C++ R++++W T+I GLA HG+ A+AL++F++M + +P+ VTF+
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIA 356
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
ILSAC+H+G V G F SM Y I P IEHYGCM DLLGRAG L +A ++ MP +
Sbjct: 357 ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFK 416
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
+A IW SLL A H ++E+ E A LI+LEP N N+++L+N+Y +LGRW + ++
Sbjct: 417 ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMR 476
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
M+ G +K+ G S IE + V +F S D HP+ E I+ L+ + + ++
Sbjct: 477 NMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 44/321 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGY----------SLTE----------SHRDVVVLFA 40
+G ARK+FD+M + WNA+ GY SL E S V+ +A
Sbjct: 167 LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYA 226
Query: 41 EMNRAAAA------------PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF 88
+ RA+ A + TL V+ +C+ G++ GE++ RG
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS 286
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG----RRLLDLA 144
L A+I+MY+ G++ A VF + ERNVV WT +I+ + G R++
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNR-----DVMSWNTLLNGYANSGDVGSF 199
+ V + ++S G + + LF+ M ++ ++ + +++ +G +
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 200 EKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++V + MP + N W L+ + A +++ ++ L+A L S
Sbjct: 407 DEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY--S 464
Query: 259 RLGALDMGKWVHVYAESIGYK 279
LG D + + + IG K
Sbjct: 465 NLGRWDESRMMRNMMKGIGVK 485
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 334 bits (857), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 290/516 (56%), Gaps = 39/516 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A K+FD++P+P+ + N + G + + V L+ EM + +P + +T V++
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSP-DRYTFTFVLK 120
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CSK G H + GF N ++ ALI ++
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHA---------------------- 158
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
+CGD+G L D + + V WS + SGY + G + A LFD+MP +D
Sbjct: 159 ---------NCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ 209
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
++WN ++ G ++ S ++F+ E++V +WN +I GY G +AL FK+M
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVG----NALIDMYAKC 295
G+ P+ T++++L AC+ LG L+ GK +H+Y E+ +++VG NALIDMYAKC
Sbjct: 270 GEH-PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I+ A++VF + RD+ +WNT+I GLA+H + ++ +F++M+ + P+ VTF+G++
Sbjct: 329 GSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVI 387
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+H G V +G YF M D Y+I P I+HYGCM D+LGRAG L++A FV M +EP+
Sbjct: 388 LACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPN 447
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A++W +LLGAC+ + NVE+ + A + L+ + ++V+LSNIY G+W V +++
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKM 507
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETES 511
DT +K G S+IE +D + L PE+ S
Sbjct: 508 FDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRS 543
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ A +F+ + + D+ N ++ G A +SL+ +M+ PD TF +L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQ-------IEHYGC------------------- 389
AC+ + +GF + +V H ++ + + H C
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 390 ----MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
M + G +D+A+ +MP + D V W ++ C K ++ A F E
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYK-DQVAWNVMITGCLKCKEMDSARELFDRFTE- 237
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
K+ + + + Y + G ++ + MRD G
Sbjct: 238 --KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/454 (39%), Positives = 270/454 (59%), Gaps = 19/454 (4%)
Query: 91 TALIEMYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISAYISCGDVGSGRRLL----- 141
T+ I + + G + +A K F +M E N + + A++S CGD SG L
Sbjct: 40 TSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGDLLH 96
Query: 142 ----DLAPERDVVMWSIVISG-YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
L +R+ VM I G Y + G AR +FD M +++ ++WNT+++GY SG V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+ K+F++MPER++ SW +I G+ + G +AL F++M + G V P+ ++A L A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG-VKPDYVAIIAALNA 215
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ LGAL G WVH Y S +K N+ V N+LID+Y +CG +E A VF +++R ++SW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N++I G A +GN ++L F +M+ +PD VTF G L+AC+H+GLV +G YFQ M
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH-KNVEIA 435
Y I P+IEHYGC+ DL RAG L+ A+ V+ MPM+P+ V+ SLL AC H N+ +A
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
E +HL +L K+ +N+V+LSN+Y G+W+ ++++ M+ G +K PG S IE +D
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+ F + D H ET I L ++ LRL G V
Sbjct: 456 MHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 138/335 (41%), Gaps = 74/335 (22%)
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL--GALDMGKWVH 270
SW I RNGR ++A + F M + G V PN T +A+L C G+ +G +H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAG-VEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 271 VYAESIGYKGN-MFVGNALIDMYAK-------------------------------CGVI 298
YA +G N + VG A+I MY+K G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
++A +F+ + RD+ISW MING G +AL F +M+ S +PD V + L+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD----------------- 401
T++G + G L+ V + + DL R G ++
Sbjct: 217 TNLGALSFG-LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 402 --------------QAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHL-- 442
+++ + RKM +PDAV +T L AC VE FQ +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 443 -IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
+ P+ ++ L ++Y GR +D +L +M
Sbjct: 336 DYRISPR-IEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 46/364 (12%)
Query: 9 DKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS--KAG 66
++ T +W + N + + F++M A P NH T ++ C +G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEP-NHITFIALLSGCGDFTSG 87
Query: 67 AVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKG------------------------ 101
+ G+ +H A K G N + TA+I MYS +G
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 102 -------SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG----RRLLDLAPERDVV 150
V +A K+F +MPER+++ WTAMI+ ++ G R + + D V
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 151 MWSIVISGYIESGDMVSA----RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
++ G + R + + +V N+L++ Y G V +VF M
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+R V SWN +I G+A NG ++L F++M +G P+ T L ACS +G ++ G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGALTACSHVGLVEEG 326
Query: 267 -KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLA 324
++ + + L+D+Y++ G +E A+ + + + + + +++ +
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 325 MHGN 328
HGN
Sbjct: 387 NHGN 390
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 285/530 (53%), Gaps = 11/530 (2%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
AR VF+ MPE N +W AM GY + LF M N + ++
Sbjct: 97 EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM-----PERNEVSWTVMFGGL 151
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G + + +++ + + + T +I +G V +A +F EM ERNVV WT
Sbjct: 152 IDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
MI+ Y V R+L ++ PE+ V W+ ++ GY SG + A E F+ MP + V++
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA 267
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
N ++ G+ G++ +VF+ M +R+ +W +I Y R G +AL+ F QM +G
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG- 326
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V P+ +L+++L C+ L +L G+ VH + + +++V + L+ MY KCG + A
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ +DII WN++I+G A HG +AL +F +M +S P+ VT + IL+AC++ G
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ +G F+SM + + P +EHY C D+LGRAG +D+A+ + M ++PDA +W +L
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
LGAC+TH +++AE+A + L E EP N +V+LS+I +W DVA ++ MR
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVS 566
Query: 483 KLPGCSVIECNDSVVEFYSLD-ERHPETESIYRALRGLTMLLRLHGYVPN 531
K PGCS IE V F + HPE I L LLR GY P+
Sbjct: 567 KFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPD 616
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 166/367 (45%), Gaps = 49/367 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARK FD + +WN++ +GY ++ LF EM+ N +V
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNG-----LVS 87
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
K + E V + +R N TA+++ Y +G VG+A +F MPERN V
Sbjct: 88 GYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WT M I G + R+L D+ P +DVV + +I G G + AR +FD+M R+V
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
++W T++ GY + V K+FE MPE+ SW ++ GY +GR DA E F
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF------ 257
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
+V+P + ++AC NA+I + + G I
Sbjct: 258 -EVMP-----MKPVIAC----------------------------NAMIVGFGEVGEISK 283
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VF+ ++ RD +W MI G +AL LF QM+ +P + + ILS C
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 361 MGLVRDG 367
+ ++ G
Sbjct: 344 LASLQYG 350
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 9/250 (3%)
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDV 149
C+ I S G + +A K F + + + W +++S Y S G R+L D ER+V
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER 209
V W+ ++SGYI++ +V AR +F+ MP R+V+SW ++ GY G VG E +F MPER
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
N SW V+ GG +GR A + + M V+ DVV + ++ R G +D + +
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-DVVAS----TNMIGGLCREGRVDEARLI 194
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
+ N+ +I Y + ++ A +F + + +SW +M+ G + G
Sbjct: 195 FDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 330 ADALSLFDQM 339
DA F+ M
Sbjct: 251 EDAEEFFEVM 260
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 123/314 (39%), Gaps = 67/314 (21%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G + K F+ + + + SWN ++ GY NG +A + F +M E +VV
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM-SERNVVS-------- 81
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
W N L+ Y K +I A +VF + R++
Sbjct: 82 --------------W-----------------NGLVSGYIKNRMIVEARNVFELMPERNV 110
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
+SW M+ G G +A SLF +M E V F GL+ DG +
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDDGRI--DK 159
Query: 374 MVDHYSIIPQIEHYGCMADLLG---RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
Y ++P ++ +++G R G +D+A +M E + V WT+++ R +
Sbjct: 160 ARKLYDMMP-VKDVVASTNMIGGLCREGRVDEARLIFDEM-RERNVVTWTTMITGYRQNN 217
Query: 431 NVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
V++A F+ + E K ++ + Y GR +D F +P VI
Sbjct: 218 RVDVARKLFEVMPE---KTEVSWTSMLLGYTLSGRIEDAEEF--------FEVMPMKPVI 266
Query: 491 ECNDSVVEFYSLDE 504
CN +V F + E
Sbjct: 267 ACNAMIVGFGEVGE 280
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 280/514 (54%), Gaps = 32/514 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+M E N TW AM +GY D LF M + +N TL ++ ++C
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
REG Q+H + ++ +++ FL +L+ MYS G +G+A VFG M +
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK------- 339
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
D V W+ +I+G ++ + A ELF+KMP +D++SW
Sbjct: 340 ------------------------DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSW 375
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
++ G++ G++ ++F MPE++ +W +I + NG + +AL F +ML + +V
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML-QKEV 434
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN +T +VL A + L L G +H + ++ V N+L+ MY KCG A
Sbjct: 435 CPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYK 494
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F+C+ +I+S+NTMI+G + +G AL LF +++S ++P+GVTF+ +LSAC H+G
Sbjct: 495 IFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
V G+ YF+SM Y+I P +HY CM DLLGR+GLLD A + + MP +P + +W SLL
Sbjct: 555 VDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLL 614
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
A +TH V++AELA + LIELEP + +V+LS +Y +G+ +D R+ + +K
Sbjct: 615 SASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKK 674
Query: 484 LPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
PG S I V F + DE E I L+
Sbjct: 675 DPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLK 708
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 169/340 (49%), Gaps = 18/340 (5%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPE--RDVV 150
+ M K +G AY++F ++PE+N V + MI+ ++ G L P RD V
Sbjct: 119 ITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSV 178
Query: 151 MWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERN 210
++++SGY+ +G A +F M ++V+S +++++GY G + +F+ M ERN
Sbjct: 179 ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN 238
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
V +W +I GY + G F D F +M EGDV N TL + AC G +H
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
+ + ++F+GN+L+ MY+K G + A VF + +D +SWN++I GL +
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH--YG 388
+A LF++M D V++ ++ + G + V+ + ++P+ ++ +
Sbjct: 359 EAYELFEKMPG----KDMVSWTDMIKGFSGKGEI-------SKCVELFGMMPEKDNITWT 407
Query: 389 CMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGA 425
M G ++A+ + KM + P++ ++S+L A
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 202/525 (38%), Gaps = 107/525 (20%)
Query: 1 MGHARKVFDKMPEPNTATWNAMF-----NGYSLTESHRDVVVLFAEMNRAAAAPLNHFTL 55
M A +VFD+MP T ++NAM N L +++ LF ++ N +
Sbjct: 97 MSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYE----LFCDIPEK-----NAVSY 147
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
++ +AG E E ++ + F+ +S L+ Y G +A +VF M
Sbjct: 148 ATMITGFVRAGRFDEAEFLYAETPVK-FR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG------------ 163
+ VV ++M+ Y G + R L D ER+V+ W+ +I GY ++G
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 164 ---------------------DMVSARE------LFDKMP-NRDVMSWNTLLNGYANSGD 195
D V RE L +MP D+ N+L++ Y+ G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+G + VF M ++ SWN LI G + + S+A E F++M P
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM-------PGK-------- 370
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
DM W +I ++ G I V++F + +D I+
Sbjct: 371 --------DMVSWTD-----------------MIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
W MI+ +G +AL F +M P+ TF +LSA + + +G L V
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG-LQIHGRV 464
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
+I+ + + + + G + A + EP+ V + +++ ++
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNIVSYNTMISG-YSYNGFGKK 522
Query: 436 ELAFQHLIELEPKNPANFVMLSNI-------YKDLGRWQDVARLK 473
L ++E K P L+ + Y DLG W+ +K
Sbjct: 523 ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG-WKYFKSMK 566
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 40/355 (11%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
IS + +G++ A +F +M NR ++SW +++ YA +G + +VF+EMP R S+N
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 216 VLIGGYARNG-RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+I +N A E F + + N + ++ R G D ++ +YAE
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDIPEK-----NAVSYATMITGFVRAGRFDEAEF--LYAE 169
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ + N L+ Y + G AV VF + ++++S ++M++G G DA S
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM-----VDHYSIIPQIEHYGC 389
LFD+M + + +T+ ++ G DGF F M V S + C
Sbjct: 230 LFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKN 449
+ R G Q V +MP+E D + SL+ ++L + E K
Sbjct: 286 RDFVRYREG--SQIHGLVSRMPLEFDLFLGNSLMSM--------YSKLGYMG----EAK- 330
Query: 450 PANFVMLSNIYKDLGRWQD-----VARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
A F ++ N KD W V R +I+ F K+PG ++ D + F
Sbjct: 331 -AVFGVMKN--KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGF 382
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 273/445 (61%), Gaps = 20/445 (4%)
Query: 106 AYKVFGEMPER-NVVVWTAMISAYISCGDVGSGRRL-----LDLAPERDVVMWSIVISGY 159
A+KVF ++ + NV +W +I Y G+ S L + E D + +I
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 160 IESGDM--------VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
D+ V R F + + N+LL+ YAN GDV S KVF++MPE+++
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSL----IYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
+WN +I G+A NG+ +AL + +M +G + P+ FT+V++L AC+++GAL +GK VHV
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
Y +G N+ N L+D+YA+CG +E A +F+ + ++ +SW ++I GLA++G +
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 332 ALSLFDQMKNSREQ-PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
A+ LF M+++ P +TFVGIL AC+H G+V++GF YF+ M + Y I P+IEH+GCM
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
DLL RAG + +A +++ MPM+P+ VIW +LLGAC H + ++AE A +++LEP +
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHS 426
Query: 451 ANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETE 510
++V+LSN+Y RW DV +++ M G +K+PG S++E + V EF D+ HP+++
Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSD 486
Query: 511 SIYRALRGLTMLLRLHGYVPNLVDV 535
+IY L+ +T LR GYVP + +V
Sbjct: 487 AIYAKLKEMTGRLRSEGYVPQISNV 511
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 172/358 (48%), Gaps = 13/358 (3%)
Query: 1 MGHARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M +A KVF K+ +P N WN + GY+ + L+ EM + + T P ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++ + VR GE +H V + GF ++ +L+ +Y+ G V AYKVF +MPE+++V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP--- 176
W ++I+ + G L + + I + + + A L ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R++ S N LL+ YA G V + +F+EM ++N SW LI G A NG +A+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALID 290
E FK M ++P + T V +L ACS G + G ++ E + + ++D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 291 MYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+ A+ G ++ A + + + +++ W T++ +HG++ L+ F +++ + +P+
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPN 424
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 241/382 (63%), Gaps = 2/382 (0%)
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
E D + +I+ Y + G + AR +FD+M RDV WN ++ GY GD+ + ++F+
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
MP +NV SW +I G+++NG +S+AL+ F M + V PN T+V+VL AC+ LG L++
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLA 324
G+ + YA G+ N++V NA I+MY+KCG+I+ A +F L ++R++ SWN+MI LA
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
HG +AL+LF QM E+PD VTFVG+L AC H G+V G F+SM + + I P++
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
EHYGCM DLLGR G L +A ++ MPM+PDAV+W +LLGAC H NVEIAE+A + L +
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS-VIECNDSVVEFYSLD 503
LEP NP N V++SNIY +W V R++ M+ K G S +E V +F D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 504 ERHPETESIYRALRGLTMLLRL 525
+ HP + IY+ L + ++L
Sbjct: 474 KSHPRSYEIYQVLEEIFRRMKL 495
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 175/379 (46%), Gaps = 57/379 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FD T +N + Y + + +VL+ ++ P +H T + +
Sbjct: 34 YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRP-SHHTFNFIFAAS 92
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + R +H + GF+ +SF CT LI Y+ G++ A +VF EM +R+V VW
Sbjct: 93 ASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWN 152
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF-----DK--M 175
AMI+ Y GD+ + L D P ++V W+ VISG+ ++G+ A ++F DK
Sbjct: 153 AMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVK 212
Query: 176 PNR---------------------------------DVMSWNTLLNGYANSGDVGSFEKV 202
PN ++ N + Y+ G + +++
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 203 FEEM-PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
FEE+ +RN+ SWN +IG A +G+ +AL F QML EG+ P+ T V +LLAC G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGG 331
Query: 262 ALDMGK-------WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DI 313
+ G+ VH + + + G M ID+ + G ++ A D+ + + D
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCM------IDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 314 ISWNTMINGLAMHGNTADA 332
+ W T++ + HGN A
Sbjct: 386 VVWGTLLGACSFHGNVEIA 404
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 15/238 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++FD MP N +W + +G+S ++ + + +F M + + NH T+ V+
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM-PERNVV 119
+C+ G + G ++ A + GF N ++C A IEMYS G + A ++F E+ +RN+
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 283
Query: 120 VWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
W +MI + + G ++L + D V + ++ + G +V +ELF M
Sbjct: 284 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 343
Query: 176 PNRDVMSWNTLLNGYANS----GDVGSFEKVFE---EMPER-NVYSWNVLIGGYARNG 225
+V + L Y G VG ++ ++ MP + + W L+G + +G
Sbjct: 344 --EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 293/551 (53%), Gaps = 35/551 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A KVFDKM E N TW M R+ + F +M + + FTL V +C
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES-DKFTLSSVFSAC 279
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMY---SAKGSVGDAYKVFGEMPERNVV 119
++ + G+Q+H A + G + C+ L++MY SA GSV D KVF M + +V+
Sbjct: 280 AELENLSLGKQLHSWAIRSGLV-DDVECS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE------SGDMVSARELFD 173
WTA+I+ Y+ + +LA E + ++ G++E S + L D
Sbjct: 338 SWTALITGYM---------KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 174 KMPNRDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGG 220
+ V+ N++++ + S + ++ FE + E+N+ S+N + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
RN F A + + + E ++ + FT ++L + +G++ G+ +H +G
Sbjct: 449 TCRNLNFEQAFKLLSE-ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
N V NALI MY+KCG I++A VFN ++ R++ISW +MI G A HG L F+QM
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+P+ VT+V ILSAC+H+GLV +G+ +F SM + + I P++EHY CM DLL RAGLL
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
A F+ MP + D ++W + LGACR H N E+ +LA + ++EL+P PA ++ LSNIY
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIY 687
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
G+W++ ++ M++ K GCS IE D + +FY D HP IY L L
Sbjct: 688 ACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLI 747
Query: 521 MLLRLHGYVPN 531
++ GYVP+
Sbjct: 748 TEIKRCGYVPD 758
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 201/476 (42%), Gaps = 30/476 (6%)
Query: 4 ARKVFDKMP---EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
A VF+ M + + +W+AM Y D + +F E P N + V+R
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP-NDYCYTAVIR 174
Query: 61 SCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMY-SAKGSVGDAYKVFGEMPERNV 118
+CS + V G K G F+ + + +LI+M+ + S +AYKVF +M E NV
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V WT MI+ C +G R + D+V+ + S + EL + +
Sbjct: 235 VTWTLMIT---RCMQMGFPREAIRFFL--DMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 179 DVMSWN-----------TLLNGYAN---SGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ SW +L++ YA G V KVF+ M + +V SW LI GY +N
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 225 GRF-SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
++A+ F +M+ +G V PN FT + AC L +GK V A G N
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
V N++I M+ K +E A F L ++++S+NT ++G + N A L ++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
TF +LS ++G +R G S V + + + + G +D A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLS 457
S V + + WTS++ H F +IE ++P +LS
Sbjct: 529 -SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 191/416 (45%), Gaps = 36/416 (8%)
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVV--MWSIVISGYIES---------GDMVSAREL- 171
+I +++ GD+ LDL RD + M S+ S ++S G +V AR +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMA-RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE 90
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP---ERNVYSWNVLIGGYARNGRFS 228
FD P D + +N+L++ Y+ SGD E VFE M +R+V SW+ ++ Y NGR
Sbjct: 91 FDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG-YKGNMFVGNA 287
DA++ F + L G +VPND+ AV+ ACS + +G+ + G ++ ++ VG +
Sbjct: 149 DAIKVFVEFLELG-LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 288 LIDMYAKC-GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
LIDM+ K E+A VF+ + ++++W MI G +A+ F M S +
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
D T + SAC + + G S ++ +E + D+ + D +V
Sbjct: 268 DKFTLSSVFSACAELENLSLG-KQLHSWAIRSGLVDDVE--CSLVDMYAKCS-ADGSVDD 323
Query: 407 VRKM--PMEPDAVI-WTSLLGACRTHKNVEIAELA---FQHLIELEPKNPANFVMLSNIY 460
RK+ ME +V+ WT+L+ KN +A A F +I P +F S+ +
Sbjct: 324 CRKVFDRMEDHSVMSWTALITG--YMKNCNLATEAINLFSEMITQGHVEPNHFT-FSSAF 380
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
K G D K + R L S + +SV+ + +R + + + +L
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVA--NSVISMFVKSDRMEDAQRAFESL 434
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 293/564 (51%), Gaps = 41/564 (7%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
F+K+P+ + TWN + GYSL+ V + M R +A L TL +++ S G
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
V G+Q+H K GF+ + + L+ MY+ G + DA KVF + +RN V++ +++
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMS 182
++CG + +L E+D V W+ +I G ++G A E F +M D
Sbjct: 214 GLLACGMIEDALQLFR-GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 183 WNTLLN-----GYANSGD----------------VGSF--------------EKVFEEMP 207
+ ++L G N G VGS + VF+ M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
++NV SW ++ GY + GR +A++ F M G + P+ +TL + AC+ + +L+ G
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSSLEEGS 391
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
H A + G + V N+L+ +Y KCG I+ + +FN ++ RD +SW M++ A G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
+ + LFD+M +PDGVT G++SAC+ GLV G YF+ M Y I+P I HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
CM DL R+G L++A+ F+ MP PDA+ WT+LL ACR N+EI + A + LIEL+P
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
+PA + +LS+IY G+W VA+L+ MR+ +K PG S I+ + F + DE P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 508 ETESIYRALRGLTMLLRLHGYVPN 531
+ IY L L + +GY P+
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPD 655
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 206/472 (43%), Gaps = 90/472 (19%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAK--RGFKW-NSFLCTALIEMYSAKGSVGDAY 107
N++++ I + C GA + V + R + +FL ++ Y+ S A
Sbjct: 4 NYYSVQI--KQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYAR 61
Query: 108 KVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS 167
+VF +P+ N+ W ++ AY G + + P+RD V W+++I GY SG + +
Sbjct: 62 RVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA 121
Query: 168 ARELFDKM-----PNRDVMSWNTLL-----NG---------------------------- 189
A + ++ M N ++ T+L NG
Sbjct: 122 AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 181
Query: 190 --YANSGDVGSFEKVFEEMPERNV------------------------------YSWNVL 217
YAN G + +KVF + +RN SW +
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAM 241
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
I G A+NG +A+E F++M V+G + + + +VL AC LGA++ GK +H
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
++ +++VG+ALIDMY KC + A VF+ + +++++SW M+ G G +A+ +F
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY----GCMADL 393
M+ S PD T +SAC ++ + +G S +I + HY + L
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC----RTHKNVEIAELAFQH 441
G+ G +D + +M + DAV WT+++ A R + +++ + QH
Sbjct: 416 YGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 166/346 (47%), Gaps = 24/346 (6%)
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
P + +++ ++ Y AR +FD++P ++ SWN LL Y+ +G + E FE
Sbjct: 37 PYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFE 96
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
++P+R+ +WNVLI GY+ +G A++A+ M+ + TL+ +L S G +
Sbjct: 97 KLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVS 156
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+GK +H +G++ + VG+ L+ MYA G I A VF LD R+ + +N+++ GL
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM------VDHY 378
G DAL LF M + D V++ ++ GL ++ F+ M +D Y
Sbjct: 217 ACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 379 ---SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
S++P G + + G+ Q + + + + + ++L+ K + A
Sbjct: 272 PFGSVLPACGGLGAINE--GK-----QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
+ F ++ KN ++ + Y GR ++ ++ + M+ +G
Sbjct: 325 KTVFD---RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 48/283 (16%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A+ VFD+M + N +W AM GY T + V +F +M R+ P +H+TL + +C
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP-DHYTLGQAISAC 381
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ ++ EG Q H A G + +L+ +Y G + D+ ++F EM R+ V WT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR---- 178
AM+SA Y + G V +LFDKM
Sbjct: 442 AMVSA-------------------------------YAQFGRAVETIQLFDKMVQHGLKP 470
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEA 233
D ++ +++ + +G V ++ F+ M ++ ++ +I ++R+GR +A+
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
M P+ +L AC G L++GKW AES+
Sbjct: 531 INGM----PFPPDAIGWTTLLSACRNKGNLEIGKWA---AESL 566
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N+LL+ YAN GDV S KVF++MPE+++ +WN +I G+A NG+ +AL + +M +G +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG-I 85
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ FT+V++L AC+++GAL +GK VHVY +G N+ N L+D+YA+CG +E A
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGVTFVGILSACTHMG 362
+F+ + ++ +SW ++I GLA++G +A+ LF M+++ P +TFVGIL AC+H G
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+V++GF YF+ M + Y I P+IEH+GCM DLL RAG + +A +++ MPM+P+ VIW +L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
LGAC H + ++AE A +++LEP + ++V+LSN+Y RW DV +++ M G +
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 483 KLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
K+PG S++E + V EF D+ HP++++IY L+ +T LR GYVP + +V
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNV 378
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 72/303 (23%)
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
VR GE +H V + GF GS+ + V +++
Sbjct: 4 VRLGETIHSVVIRSGF-----------------GSL--------------IYVQNSLLHL 32
Query: 128 YISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN---------- 177
Y +CGDV S ++ D PE+D+V W+ VI+G+ E+G A L+ +M +
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 178 -----------------------------RDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
R++ S N LL+ YA G V + +F+EM +
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-K 267
+N SW LI G A NG +A+E FK M ++P + T V +L ACS G + G +
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMH 326
+ E + + ++D+ A+ G ++ A + + + +++ W T++ +H
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 327 GNT 329
G++
Sbjct: 273 GDS 275
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 91/159 (57%), Gaps = 2/159 (1%)
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+G+ +H G+ ++V N+L+ +YA CG + SA VF+ + +D+++WN++ING A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+G +AL+L+ +M + +PDG T V +LSAC +G + G M+ + +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNL 124
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ DL R G +++A + +M ++ ++V WTSL+
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 139/327 (42%), Gaps = 49/327 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFDKMPE + WN++ NG++ + + L+ EMN P + FT+ ++ +C+
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP-DGFTIVSLLSACA 100
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K GA+ G++VH K G N L+++Y+ G V +A +F EM ++N V WT+
Sbjct: 101 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 160
Query: 124 MI------------------------------------SAYISCGDVGSG----RRLL-D 142
+I A CG V G RR+ +
Sbjct: 161 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-DVMSWNTLLNGYANSG--DVGSF 199
E + + ++ +G + A E MP + +V+ W TLL G D+ F
Sbjct: 221 YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEF 280
Query: 200 EKVFEEMPERNVYSWNVLIGG-YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++ E N VL+ YA R+SD + KQML +G +LV V +
Sbjct: 281 ARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV---GN 337
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVG 285
R+ MG H +++I K G
Sbjct: 338 RVHEFLMGDKSHPQSDAIYAKLKEMTG 364
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 268/477 (56%), Gaps = 32/477 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A + +++ PN T N++ Y+ + + + +F EM P + ++ V++
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFP-DKYSFTFVLK 148
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ EG Q+H + K G + F+ L+ +Y G A
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIA-------------- 194
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
R++LD P RD V W+ ++S Y+E G + AR LFD+M R+V
Sbjct: 195 -----------------RKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNV 237
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
SWN +++GYA +G V ++VF+ MP R+V SWN ++ YA G +++ LE F +ML +
Sbjct: 238 ESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDD 297
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
P+ FTLV+VL AC+ LG+L G+WVHVY + G + F+ AL+DMY+KCG I+
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A++VF +RD+ +WN++I+ L++HG DAL +F +M +P+G+TF+G+LSAC H
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
+G++ F+ M Y + P IEHYGCM DLLGR G +++A V ++P + +++
Sbjct: 418 VGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE 477
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
SLLGAC+ +E AE L+EL ++ + + +SN+Y GRW+ V + MR
Sbjct: 478 SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 299/562 (53%), Gaps = 41/562 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VF M + ++ +WN+M G + V + M R P FTL + SC+
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP-GSFTLISSLSSCA 426
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+Q+H + K G N + AL+ +Y+ G + + K+F MPE + V W +
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG-------------------YIESGD 164
+I G + R L PE V + +G + E G
Sbjct: 487 II------GALARSERSL---PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER--NVYSWNVLIGGYA 222
+ L + + + + + N L+ Y G++ EK+F M ER NV +WN +I GY
Sbjct: 538 QIHGLALKNNIAD-EATTENALIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMISGYI 595
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
N + AL+ ML G + + F VL A + + L+ G VH + + ++
Sbjct: 596 HNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-N 341
VG+AL+DMY+KCG ++ A+ FN + R+ SWN+MI+G A HG +AL LF+ MK +
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
+ PD VTFVG+LSAC+H GL+ +GF +F+SM D Y + P+IEH+ CMAD+LGRAG LD
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGAC--RTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+ F+ KMPM+P+ +IW ++LGAC + E+ + A + L +LEP+N N+V+L N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
Y GRW+D+ + + M+D +K G S + D V F + D+ HP+ + IY+ L+ L
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 520 TMLLRLHGYVPN----LVDVAQ 537
+R GYVP L D+ Q
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQ 916
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 23/455 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+MP N +W + +GYS H++ +V +M + N + V+R+C
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQ 113
Query: 64 KAGAV--REGEQVHCVAAKRGFKWNSFLCTALIEMY-SAKGSVGDAYKVFGEMPERNVVV 120
+ G+V G Q+H + K + ++ + LI MY GSVG A FG++ +N V
Sbjct: 114 EIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVS 173
Query: 121 WTAMISAYISCGDVGSGRRLL-----DLAPERDVVMWSIVISG-YIESGDMVSARELFDK 174
W ++IS Y GD S R+ D + + S+V + + D+ ++
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 175 MPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ D+ + L++ +A SG + KVF +M RN + N L+ G R +A
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLG---ALDMGKWVHVYAESIGYKGNMF-VGN 286
+ F M DV P + ++ L L G+ VH + + G M +GN
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
L++MYAKCG I A VF + +D +SWN+MI GL +G +A+ + M+ P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 347 DGVTFVGILSACTHMGLVRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
T + LS+C + + G ++ +S+ I + + L G L++
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 406 FVRKMPMEPDAVIWTSLLGA-CRTHKNVEIAELAF 439
MP E D V W S++GA R+ +++ A + F
Sbjct: 472 IFSSMP-EHDQVSWNSIIGALARSERSLPEAVVCF 505
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 203/438 (46%), Gaps = 17/438 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+A F + N+ +WN++ + YS R +F+ M + P + +V
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 61 SCSKAGA-VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+CS VR EQ+ C K G + F+ + L+ ++ GS+ A KVF +M RN V
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAV 275
Query: 120 VWTAMISAYI--SCGDVGSG-----RRLLDLAPERDVVM------WSIVISGYIESGDMV 166
++ + G+ + ++D++PE V++ +S+ ++ G V
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ + + V N L+N YA G + +VF M +++ SWN +I G +NG
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
F +A+E +K M D++P FTL++ L +C+ L +G+ +H + +G N+ V N
Sbjct: 396 FIEAVERYKSMR-RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT-ADALSLFDQMKNSREQ 345
AL+ +YA+ G + +F+ + D +SWN++I LA + +A+ F + + ++
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
+ +TF +LSA + + G + +I + + G+ G +D
Sbjct: 515 LNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 406 FVRKMPMEPDAVIWTSLL 423
+M D V W S++
Sbjct: 574 IFSRMAERRDNVTWNSMI 591
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTE-SHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ RK+F MPE + +WN++ + +E S + VV F R A LN T V+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVL 524
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNV 118
+ S G+Q+H +A K + ALI Y G + K+F M E R+
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 119 VVWTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVISGY-----IESGDMVSAR 169
V W +MIS YI + L L D M++ V+S + +E G V A
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ + + DV+ + L++ Y+ G + + F MP RN YSWN +I GYAR+G+ +
Sbjct: 645 SVRACLES-DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNAL 288
AL+ F+ M ++G P+ T V VL ACS G L+ G K ++S G + + +
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763
Query: 289 IDMYAKCGVIESAVDVFNCLDRR-DIISWNTMI 320
D+ + G ++ D + + +++ W T++
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 20/314 (6%)
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
L+ ++DV N L+N Y +GD S KVF+EMP RN SW ++ GY+RNG +A
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM--GKWVHVYAESIGYKGNMFVGNAL 288
L + M+ EG + N + V+VL AC +G++ + G+ +H + Y + V N L
Sbjct: 87 LVFLRDMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 289 IDMYAKC-GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
I MY KC G + A+ F ++ ++ +SWN++I+ + G+ A +F M+ +P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ----- 402
TF +++ T L + I+ I+ G + DL +GL+
Sbjct: 206 EYTFGSLVT--TACSLTEPDVRLLE------QIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 403 AVSFVRKM--PMEP-DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
++S+ RK+ ME +AV L+ K E A F + + +P ++V+L +
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 460 YKDLGRWQDVARLK 473
+ + ++V K
Sbjct: 318 FPEYSLAEEVGLKK 331
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 127/297 (42%), Gaps = 25/297 (8%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER 147
+LC LI Y G A KVF EMP RN V W ++S Y G+ L R
Sbjct: 37 YLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFL-----R 91
Query: 148 DVVMWSIVISGY-----------IESGDMVSARE----LFDKMPNRDVMSWNTLLNGYAN 192
D+V I + Y I S ++ R+ +F D + N L++ Y
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 193 S-GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
G VG F ++ +N SWN +I Y++ G A F M +G P ++T
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTFG 210
Query: 252 AVLLACSRLGALD--MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+++ L D + + + + G ++FVG+ L+ +AK G + A VFN ++
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
R+ ++ N ++ GL +A LF M NS ++V +LS+ L +
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEE 326
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 290/542 (53%), Gaps = 11/542 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD+M ++ ++N M GY E + V +F E N P + T+ V+R+C
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP-DLLTVSSVLRACG 318
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + ++ K GF S + LI++Y+ G + A VF M ++ V W +
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 124 MISAYISCGDVGSGRRLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+IS YI GD+ +L + + D + + ++IS D+ + L
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 179 ---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D+ N L++ YA G+VG K+F M + +WN +I R G F+ L+
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QM + +VVP+ T + L C+ L A +GK +H GY+ + +GNALI+MY+KC
Sbjct: 499 QMR-KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G +E++ VF + RRD+++W MI M+G AL F M+ S PD V F+ I+
Sbjct: 558 GCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+H GLV +G F+ M HY I P IEHY C+ DLL R+ + +A F++ MP++PD
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD 677
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A IW S+L ACRT ++E AE + +IEL P +P ++ SN Y L +W V+ ++ +
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
++D K PG S IE +V F S D+ P++E+IY++L L L+ GY+P+ +V
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREV 797
Query: 536 AQ 537
+Q
Sbjct: 798 SQ 799
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 201/423 (47%), Gaps = 13/423 (3%)
Query: 12 PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREG 71
P N WN++ +S + + + ++ + +P + +T P V+++C+ G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP-DKYTFPSVIKACAGLFDAEMG 125
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC 131
+ V+ GF+ + F+ AL++MYS G + A +VF EMP R++V W ++IS Y S
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 132 GDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARE-------LFDKMPNRDVMSW 183
G + +V S +S + + G+++ ++ N V+
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+ Y +VF+EM R+ S+N +I GY + +++ F + L
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQF 303
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ T+ +VL AC L L + K+++ Y G+ V N LID+YAKCG + +A D
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VFN ++ +D +SWN++I+G G+ +A+ LF M EQ D +T++ ++S T +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ G + + I + + D+ + G + ++ M D V W +++
Sbjct: 424 LKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVI 481
Query: 424 GAC 426
AC
Sbjct: 482 SAC 484
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 161/307 (52%), Gaps = 40/307 (13%)
Query: 186 LLNGYANSGDVGSFEKVFEEM-PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
L++ Y++ + S VF + P +NVY WN +I +++NG F +ALE F L E V
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FYGKLRESKVS 103
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
P+ +T +V+ AC+ L +MG V+ +G++ ++FVGNAL+DMY++ G++ A V
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + RD++SWN++I+G + HG +AL ++ ++KNS PD T +L A ++ +V
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 365 RDG-------------------------FLYFQSMVDHYSIIPQIE-----HYGCMADLL 394
+ G +L F+ D + +++ Y M
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 395 GRAGLLDQAVS-FVRKM-PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPAN 452
+ +++++V F+ + +PD + +S+L AC +++ +A+ + ++++ A
Sbjct: 284 LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK------AG 337
Query: 453 FVMLSNI 459
FV+ S +
Sbjct: 338 FVLESTV 344
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 48/254 (18%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G + K+F M +T TWN + + + + +M ++ P + T + +
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP-DMATFLVTLP 517
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ A R G+++HC + G++ + ALIEMYS G + ++ +VF M R+VV
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 121 WTAMISAYISCGDVGSGRRLLD---------LAPERDV---VMWSIVISGYIESG----- 163
WT MI AY G G G + L+ + P+ V ++++ SG ++ G
Sbjct: 578 WTGMIYAY---GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFE 634
Query: 164 -------------------DMVS-------ARELFDKMPNR-DVMSWNTLLNGYANSGDV 196
D++S A E MP + D W ++L SGD+
Sbjct: 635 KMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDM 694
Query: 197 GSFEKVFEEMPERN 210
+ E+V + E N
Sbjct: 695 ETAERVSRRIIELN 708
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDII 314
A S L+ + +H S+G + F LID Y+ S++ VF + +++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
WN++I + +G +AL + +++ S+ PD TF ++ AC + G L ++ +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+D + + D+ R GLL +A +MP+ D V W SL+ +H E
Sbjct: 133 LD-MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEE 190
Query: 435 AELAFQHL 442
A + L
Sbjct: 191 ALEIYHEL 198
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 304/604 (50%), Gaps = 80/604 (13%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
V +P+P +++++ + + + +F+ M P +H LP + + C++
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSH-VLPNLFKVCAELS 130
Query: 67 AVREGEQVHCVAAKRGFKWNSFL-------------------------------CTALIE 95
A + G+Q+HCV+ G ++F+ C+AL+
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 96 MYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISAYISCG------------------- 132
Y+ KG + + ++ EM E N+V W ++S + G
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 133 ----------DVGSGRRL----------LDLAPERDVVMWSIVISGYIESGDMVSARELF 172
VG L + +D + S +I Y +SG + LF
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGS----FEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
++ + N + G + +G V FE E+ E NV SW +I G A+NG+
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ALE F++M V G V PN T+ ++L AC + AL G+ H +A + N+ VG+AL
Sbjct: 371 EALELFREMQVAG-VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMYAKCG I + VFN + ++++ WN+++NG +MHG + +S+F+ + +R +PD
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
++F +LSAC +GL +G+ YF+ M + Y I P++EHY CM +LLGRAG L +A ++
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
+MP EPD+ +W +LL +CR NV++AE+A + L LEP+NP +V+LSNIY G W +
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
V ++ M G +K PGCS I+ + V + D+ HP+ + I + ++ +R G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Query: 529 VPNL 532
PNL
Sbjct: 670 RPNL 673
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 70/321 (21%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L+ Y+N + V + +P+ +YS++ LI + F+ ++ F +M G ++P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIP 114
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ L + C+ L A +GK +H + G + FV ++ MY +CG + A VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 306 NCLDRRD-----------------------------------IISWNTMINGLAMHGNTA 330
+ + +D I+SWN +++G G
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 331 DALSLFDQMKNSREQPDGVTFVGIL-----SACTHMGLVRDGFLYFQSMV-DHYSIIPQI 384
+A+ +F ++ + PD VT +L S +MG + G++ Q ++ D I I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 385 EHYG----------------------CMADLLG--RAGLLDQAV---SFVRKMPMEPDAV 417
+ YG C A + G R GL+D+A+ ++ ME + V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 418 IWTSLLGAC-RTHKNVEIAEL 437
WTS++ C + K++E EL
Sbjct: 355 SWTSIIAGCAQNGKDIEALEL 375
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 286/524 (54%), Gaps = 13/524 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+MP + +WNAM +GY + + LF M + P + TL V+ +C
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP-DLMTLTSVISACE 308
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G R G +H GF + +C +L +MY GS +A K+F M +++V WT
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 124 MISAY----ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
MIS Y + + + R + + + D + + V+S GD+ + EL
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 180 VMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
++S+ N L+N Y+ + +F +P +NV SW +I G N R +AL +
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QM + + PN TL A L AC+R+GAL GK +H + G + F+ NAL+DMY +C
Sbjct: 489 QMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + +A FN ++D+ SWN ++ G + G + + LFD+M SR +PD +TF+ +L
Sbjct: 547 GRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
C+ +VR G +YF M D Y + P ++HY C+ DLLGRAG L +A F++KMP+ PD
Sbjct: 606 CGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W +LL ACR H +++ EL+ QH+ EL+ K+ +++L N+Y D G+W++VA+++
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
M++ G GCS +E V F S D+ HP+T+ I L G
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGF 768
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 176/349 (50%), Gaps = 10/349 (2%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF KM E N +WN + GY+ + + L+ M + +T P V+R+C
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ G++VH + G++ + + ALI MY G V A +F MP R+++ W AMIS
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 127 AYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR---- 178
Y G G L L+ + D++ + VIS GD R++ +
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ N+L Y N+G EK+F M +++ SW +I GY N A++ ++ M+
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR-MM 389
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+ V P++ T+ AVL AC+ LG LD G +H A + V N LI+MY+KC I
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+ A+D+F+ + R+++ISW ++I GL ++ +AL QMK + QP+
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTL-QPN 497
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 181/411 (44%), Gaps = 76/411 (18%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+VR C A EG +V+ +A L A + M+ G++ DA+ VFG+M ERN
Sbjct: 100 LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERN 159
Query: 118 VVVWTAMISAYI---------------------------------SCG---DVGSGR--- 138
+ W ++ Y +CG D+ G+
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 139 -RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
++ E D+ + + +I+ Y++ GD+ SAR LFD+MP RD++SWN +++GY
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY------- 272
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVLLA 256
FE NG + LE F M G V P+ TL +V+ A
Sbjct: 273 -FE-----------------------NGMCHEGLELFFAM--RGLSVDPDLMTLTSVISA 306
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C LG +G+ +H Y + G+ ++ V N+L MY G A +F+ ++R+DI+SW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
TMI+G + A+ + M +PD +T +LSAC +G + G + +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG-VELHKLAI 425
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
+I + + ++ + +D+A+ +P + + WTS++ R
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLR 475
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 46/295 (15%)
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
+ G NG+ +A++ M E V ++ VA++ C A + G V+ A S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+ +GNA + M+ + G + A VF + R++ SWN ++ G A G +A+ L+
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 338 QMK-NSREQPDGVTFVGILSAC-----------THMGLVRDGFLY----FQSMVDHYSII 381
+M +PD TF +L C H+ +VR G+ +++ Y
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 382 PQIEHYGCMADLLGRA---------------GLLDQAVSF---VRKMPMEPDAVIWTSLL 423
++ + D + R G+ + + +R + ++PD + TS++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 424 GAC------RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
AC R +++ + +++ N L+ +Y + G W++ +L
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLNAGSWREAEKL 354
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 274/529 (51%), Gaps = 43/529 (8%)
Query: 42 MNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG 101
+ RA P + T +++ CS+ A+ EG++VH GF + L+ MY+ G
Sbjct: 77 LGRAKKPPAS--TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 102 SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE 161
S+ DA KVF EMP R++ W M++ Y G + R+L D E+D W+ +++GY++
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 162 SGDMVSARELF---DKMPN-------------------------------------RDVM 181
A L+ ++PN D +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
W++L++ Y G + +F+++ E++V SW +I Y ++ R+ + F + LV
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE-LVGS 313
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
PN++T VL AC+ L ++GK VH Y +G+ F ++L+DMY KCG IESA
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
V + + D++SW ++I G A +G +AL FD + S +PD VTFV +LSACTH
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
GLV G +F S+ + + + +HY C+ DLL R+G +Q S + +MPM+P +W S
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
+LG C T+ N+++AE A Q L ++EP+NP +V ++NIY G+W++ +++ M++ G
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 482 RKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
K PG S E F + D HP I LR L ++ GYVP
Sbjct: 554 TKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 163/343 (47%), Gaps = 21/343 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARK+FD+M E ++ +W AM GY + + +VL++ M R + N FT+ I V
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ + +R G+++H + G + L ++L++MY G + +A +F ++ E++VV
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WT+MI Y G L ++V + Y +G + + +L + + V
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFS-----ELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 181 MSWNT-------------LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ T L++ Y G++ S + V + P+ ++ SW LIGG A+NG+
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+AL+ F +L G P+ T V VL AC+ G ++ G ++ + E
Sbjct: 402 DEALKYFDLLLKSG-TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
L+D+ A+ G E V + + + W +++ G + +GN
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 53/287 (18%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWN-----VLIGGYARNGRFSDALEAF--KQM 237
T L+G+ ++ SF + ++ ++ N V++ R RF +A++ +++
Sbjct: 10 TTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKL 69
Query: 238 LVEGDVV------PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
L E + P T ++ CS+ AL+ GK VH + + G+ + + N L+ M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YAKCG + A VF+ + RD+ SWN M+NG A G +A LFD+M + D ++
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT----EKDSYSW 185
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI--------------------EHYG--- 388
+++ + + + M + P I E +G
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 389 ------------CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ D+ G+ G +D+A + K+ +E D V WTS++
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 289/540 (53%), Gaps = 8/540 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FDK + TWN+M +GY+ + + +F M R L+ + V++ C+
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCA 306
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVWT 122
+R EQ+HC K GF ++ + TAL+ YS ++ DA ++F E+ NVV WT
Sbjct: 307 NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
AMIS ++ L + V S + + ++S E+ ++ +
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 426
Query: 183 WNT----LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+T LL+ Y G V KVF + ++++ +W+ ++ GYA+ G A++ F + L
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE-L 485
Query: 239 VEGDVVPNDFTLVAVLLACSRLGA-LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+G + PN+FT ++L C+ A + GK H +A ++ V +AL+ MYAK G
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
IESA +VF +D++SWN+MI+G A HG AL +F +MK + + DGVTF+G+ +A
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
CTH GLV +G YF MV I P EH CM DL RAG L++A+ + MP +
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGST 665
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
IW ++L ACR HK E+ LA + +I ++P++ A +V+LSN+Y + G WQ+ A+++ M
Sbjct: 666 IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMN 725
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
+ +K PG S IE + F + D HP + IY L L+ L+ GY P+ V Q
Sbjct: 726 ERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQ 785
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 208/468 (44%), Gaps = 46/468 (9%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
RKVFD+M E N TW + +GY+ + +V+ LF M P N FT + ++
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP-NSFTFAAALGVLAE 206
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
G G QVH V K G + +LI +Y G+V A +F + ++VV W +M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA---------REL-FDK 174
IS Y + G LDL + M+ + Y+ + A +EL F +
Sbjct: 267 ISGYAANG--------LDLEA---LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE 315
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEK---------VFEEMP-ERNVYSWNVLIGGYARN 224
+ V+ + L + + + ++ K +F+E+ NV SW +I G+ +N
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
+A++ F +M +G V PN+FT +L A + + VH Y+ + V
Sbjct: 376 DGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTV 430
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
G AL+D Y K G +E A VF+ +D +DI++W+ M+ G A G T A+ +F ++
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL----GRAGLL 400
+P+ TF IL+ C F ++I +++ C++ L + G +
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHG----FAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
+ A V K E D V W S++ H A F+ + + + K
Sbjct: 547 ESAEE-VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 20/289 (6%)
Query: 105 DAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYI 160
+A+ +F + P R+ + +++ + G +RL L E D ++S V+
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 161 ESGDMVSARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
D + R+L + DV +L++ Y + KVF+EM ERNV +W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
LI GYARN + L F +M EG PN FT A L + G G VH
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G + V N+LI++Y KCG + A +F+ + + +++WN+MI+G A +G +AL +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 337 DQMKNSREQPDGVTFVGILSACT-----------HMGLVRDGFLYFQSM 374
M+ + + +F ++ C H +V+ GFL+ Q++
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 290/540 (53%), Gaps = 15/540 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD MPE N +W AM GY + +V+ LF M + + N F +V +SCS
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+G + EG+Q H K G + F+ L+ MYS G+A +V ++P ++ V+++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-------GDMVSARELFDKMP 176
+S Y+ CG G +L D V W+ + Y+ S D+ A ++ +M
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFV-WNNLT--YLSSLRLFSNLRDLNLALQVHSRMV 264
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
N +V + L+N Y G V ++VF++ +N++ ++ Y ++ F +AL
Sbjct: 265 RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +M + +V PN++T +L + + L L G +H GY+ ++ VGNAL++MY
Sbjct: 325 LFSKMDTK-EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AK G IE A F+ + RDI++WNTMI+G + HG +AL FD+M + E P+ +TF+
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+L AC+H+G V G YF ++ + + P I+HY C+ LL +AG+ A F+R P+
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
E D V W +LL AC +N + + ++ IE P + +V+LSNI+ W+ VA++
Sbjct: 504 EWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKV 563
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
+ M + G +K PG S I + F + D +HPE IY ++ + ++ GY P++
Sbjct: 564 RSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 175/440 (39%), Gaps = 71/440 (16%)
Query: 44 RAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSV 103
++ P L +++ C+ + +R GE +H A + + +
Sbjct: 23 KSKKTPFPIDRLNELLKVCANSSYLRIGESIH----------------AHLIVTNQSSRA 66
Query: 104 GDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG 163
DAY++ ++I+ Y+ C + R+L DL PER+VV W ++ GY SG
Sbjct: 67 EDAYQI------------NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSG 114
Query: 164 DMVSARELFDKM-------PNRDVMS---------------------------------W 183
+LF M PN V +
Sbjct: 115 FDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVR 174
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
NTL+ Y+ G +V +++P ++ ++ + GY G F + L+ ++ E D
Sbjct: 175 NTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE-DF 233
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
V N+ T ++ L S L L++ VH G+ + ALI+MY KCG + A
Sbjct: 234 VWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQR 293
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ ++I T+++ + +AL+LF +M P+ TF +L++ + L
Sbjct: 294 VFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSL 353
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ G L +V + + ++ ++G ++ A M D V W +++
Sbjct: 354 LKQGDL-LHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMI 411
Query: 424 GACRTHKNVEIAELAFQHLI 443
C H A AF +I
Sbjct: 412 SGCSHHGLGREALEAFDRMI 431
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 9/331 (2%)
Query: 157 SGYIESGDMVSARELFDKMPNR--DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
S Y+ G+ + A + +R D N+L+N Y + K+F+ MPERNV SW
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
++ GY +G + L+ FK M G+ PN+F V +CS G ++ GK H
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
G + FV N L+ MY+ C A+ V + L D+ +++ ++G G + L
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ--SMVDHYSIIPQIEHYGCMAD 392
+ + N + +T++ L +++ RD L Q S + + ++E G + +
Sbjct: 224 VLRKTANEDFVWNNLTYLSSLRLFSNL---RDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE-PKNPA 451
+ G+ G + A + + + T+++ A K+ E A F + E P N
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQ-NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEY 339
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
F +L N +L + L + +G+R
Sbjct: 340 TFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 43/324 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A++VFD N + + Y +S + + LF++M+ P N +T I++ S
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP-NEYTFAILLNSI 348
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ +++G+ +H + K G++ + + AL+ MY+ GS+ DA K F M R++V W
Sbjct: 349 AELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWN 408
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
MIS C G GR L+ A +R ++ +G I PNR ++
Sbjct: 409 TMISG---CSHHGLGREALE-AFDR------MIFTGEI---------------PNR--IT 441
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFKQM 237
+ +L ++ G V F ++ ++ ++ + ++G ++ G F DA + +
Sbjct: 442 FIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTA 501
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+E DVV +L AC +GK V YA Y + V L +++AK
Sbjct: 502 PIEWDVV----AWRTLLNACYVRRNYRLGKKVAEYAIE-KYPNDSGVYVLLSNIHAKSRE 556
Query: 298 IESAVDVFNCLDRRDI-----ISW 316
E V + ++ R + +SW
Sbjct: 557 WEGVAKVRSLMNNRGVKKEPGVSW 580
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 277/524 (52%), Gaps = 29/524 (5%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F E N NA+ G + V F M R P + T P V++S SK G
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKP-DRLTFPFVLKSNSKLG 140
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
G +H K +SF+ +L++MY+ G + A++VF E P+R
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDR---------- 190
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
+ +++W+++I+GY + DM A LF MP R+ SW+TL
Sbjct: 191 -----------------IKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTL 233
Query: 187 LNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN 246
+ GY +SG++ +++FE MPE+NV SW LI G+++ G + A+ + +ML +G + PN
Sbjct: 234 IKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG-LKPN 292
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
++T+ AVL ACS+ GAL G +H Y G K + +G AL+DMYAKCG ++ A VF+
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 307 CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
++ +DI+SW MI G A+HG A+ F QM S E+PD V F+ +L+AC + V
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
G +F SM Y+I P ++HY + DLLGRAG L++A V MP+ PD W +L AC
Sbjct: 413 GLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRAC 472
Query: 427 RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPG 486
+ HK AE Q+L+EL+P+ +++ L + G QDV + +++++ + G
Sbjct: 473 KAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLG 532
Query: 487 CSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
S IE + + +F + D H T+ I L + L GY P
Sbjct: 533 WSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNP 576
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 12/252 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+++F+ MPE N +W + NG+S T + + + EM P N +T+ V+
Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKP-NEYTIAAVLS 301
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CSK+GA+ G ++H G K + + TAL++MY+ G + A VF M ++++
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS 361
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
WTAMI + G R+++ + D V++ V++ + S ++ FD M
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR 421
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDA 230
+ + +++ +G + ++ E MP ++ +W L + + A
Sbjct: 422 LDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Query: 231 LEAFKQMLVEGD 242
E+ Q L+E D
Sbjct: 482 -ESVSQNLLELD 492
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 268/491 (54%), Gaps = 13/491 (2%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T +++ C ++ + +VH G + FL T LI MYS GSV A KVF +
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 114 PERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIES----GDM 165
+R + VW A+ A G +G ++ + E D ++ V+ + S +
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 166 VSARELFDKMPNRDVMS----WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY 221
+ +E+ + R S TL++ YA G V VF MP RNV SW+ +I Y
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 222 ARNGRFSDALEAFKQMLVE-GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
A+NG+ +AL F++M+ E D PN T+V+VL AC+ L AL+ GK +H Y G
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ V +AL+ MY +CG +E VF+ + RD++SWN++I+ +HG A+ +F++M
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+ P VTFV +L AC+H GLV +G F++M + I PQIEHY CM DLLGRA L
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL 438
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
D+A V+ M EP +W SLLG+CR H NVE+AE A + L LEPKN N+V+L++IY
Sbjct: 439 DEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY 498
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
+ W +V R+K + G +KLPG +E + F S+DE +P E I+ L L
Sbjct: 499 AEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
Query: 521 MLLRLHGYVPN 531
++ GY+P
Sbjct: 559 EDMKEKGYIPQ 569
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 34/350 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARKVFDK + WNA+F +L +V+ L+ +MNR + FT V+++C
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES-DRFTYTYVLKAC 188
Query: 63 ----SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ +G+++H +RG+ + ++ T L++MY+ G V A VFG MP RNV
Sbjct: 189 VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 119 VVWTAMISAYISCGDVGSGRRLL--------DLAPERDVVMWSIVIS----GYIESGDMV 166
V W+AMI+ Y G R D +P V M S++ + +E G ++
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN-SVTMVSVLQACASLAALEQGKLI 307
Query: 167 SA----RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
R L +P V+S L+ Y G + ++VF+ M +R+V SWN LI Y
Sbjct: 308 HGYILRRGLDSILP---VIS--ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGN 281
+G A++ F++ML G P T V+VL ACS G ++ GK + G K
Sbjct: 363 VHGYGKKAIQIFEEMLANG-ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS---WNTMINGLAMHGN 328
+ ++D+ + ++ A + D R W +++ +HGN
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQ--DMRTEPGPKVWGSLLGSCRIHGN 469
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 12/250 (4%)
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
S N LI + G+ A+ Q + P+ T ++L C +L VH +
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQ-----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G + F+ LI MY+ G ++ A VF+ +R I WN + L + G+ +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA- 391
L L+ +M + D T+ +L AC + + + + H + H M
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 392 --DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC--RTHKNVEIAELAFQHLIELEP 447
D+ R G +D A MP+ + V W++++ AC + K E + + E +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-ACYAKNGKAFEALRTFREMMRETKD 280
Query: 448 KNPANFVMLS 457
+P + M+S
Sbjct: 281 SSPNSVTMVS 290
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 300/605 (49%), Gaps = 82/605 (13%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
FD++P+ ++ +W M GY + + + +M + P FTL V+ S +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP-TQFTLTNVLASVAATRC 161
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG-------------------------- 101
+ G++VH K G + N + +L+ MY+ G
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 102 --SVGD---AYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD----------LAPE 146
VG A F +M ER++V W +MIS + G R LD L+P+
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGF---NQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 147 R-------------------------------DV--VMWSIVISGYIESGDMVSARELFD 173
R D+ ++ + +IS Y G + +AR L +
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 174 KMPNRD--VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ +D + + LL+GY GD+ + +F + +R+V +W +I GY ++G + +A+
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F+ M V G PN +TL A+L S L +L GK +H A G ++ V NALI M
Sbjct: 399 NLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 292 YAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
YAK G I SA F+ + RD +SW +MI LA HG+ +AL LF+ M +PD +T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+VG+ SACTH GLV G YF M D IIP + HY CM DL GRAGLL +A F+ KM
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P+EPD V W SLL ACR HKN+++ ++A + L+ LEP+N + L+N+Y G+W++ A
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
+++ +M+D +K G S IE V F D HPE IY ++ + ++ GYVP
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
Query: 531 NLVDV 535
+ V
Sbjct: 698 DTASV 702
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 207/506 (40%), Gaps = 109/506 (21%)
Query: 46 AAAPLNHFTL-----PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAK 100
A PL+ TL ++ +S +K+ + VHC K G ++ +L L+ +YS
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G A K+F EMP R W ++SAY GD+ S D P+RD V W+ +I GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 161 ESGDMVSARELFDKM--------------------------PNRDVMSW----------- 183
G A + M + V S+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 184 --NTLLNGYANSGD----------------------------VGSFEKV---FEEMPERN 210
N+LLN YA GD VG + FE+M ER+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
+ +WN +I G+ + G AL+ F +ML + + P+ FTL +VL AC+ L L +GK +H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIES------------------------------ 300
+ + G+ + V NALI MY++CG +E+
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 301 ---AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
A ++F L RD+++W MI G HG+ +A++LF M ++P+ T +LS
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
+ + + G S V I + + + +AG + A + E D V
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLI 443
WTS++ A H + E A F+ ++
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETML 507
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 282/533 (52%), Gaps = 9/533 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++FD++ +P+ TW++M +G+ S V F M A+ + TL +V
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+K R G VH +RGF + L +L+ Y+ + +A +F + E++V+
Sbjct: 172 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 231
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD--- 173
W+ +I+ Y+ G ++D E +V V+ + D+ R+ +
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 174 -KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
K +V L++ Y VF +P ++V SW LI G+ NG ++E
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 351
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F ML+E + P+ +V VL +CS LG L+ K H Y G+ N F+G +L+++Y
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELY 411
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTF 351
++CG + +A VFN + +D + W ++I G +HG AL F+ M K+S +P+ VTF
Sbjct: 412 SRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTF 471
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ ILSAC+H GL+ +G F+ MV+ Y + P +EHY + DLLGR G LD A+ ++MP
Sbjct: 472 LSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
P I +LLGACR H+N E+AE + L ELE + ++++SN+Y G W++V +
Sbjct: 532 FSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEK 591
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
L+ +++ G +K S+IE V F + DE HPE E +Y L+ L + ++
Sbjct: 592 LRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 224/469 (47%), Gaps = 23/469 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++F +M + + WN + S + +V+ F+ M R P N FTLP+ +++C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN-FTLPVALKACG 71
Query: 64 KAGAVREGEQVHCVAAKR-GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ V GE +H K + ++ ++LI MY G + +A ++F E+ + ++V W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 123 AMISAYISCGD----VGSGRRLL---DLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
+M+S + G V RR++ D+ P+R V ++S + + R + +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDR--VTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 176 PNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R D+ N+LLN YA S +F+ + E++V SW+ +I Y +NG ++AL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F M+ +G PN T++ VL AC+ L+ G+ H A G + + V AL+DM
Sbjct: 250 LVFNDMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM---KNSREQPDG 348
Y KC E A VF+ + R+D++SW +I+G ++G ++ F M N+R PD
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR--PDA 366
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+ V +L +C+ +G + F S V Y + +L R G L A
Sbjct: 367 ILMVKVLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
+ ++ D V+WTSL+ H A F H+++ P LS
Sbjct: 426 GIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 199/424 (46%), Gaps = 52/424 (12%)
Query: 105 DAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL---------DLAPERDVVMWSIV 155
DA ++FGEM +R++ W ++ S +L + P+ + ++
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLK---SLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALK 68
Query: 156 ISGYIES---GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
G + G+M+ D D+ ++L+ Y G + ++F+E+ + ++
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
+W+ ++ G+ +NG A+E F++M++ DV P+ TL+ ++ AC++L +G+ VH +
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G+ ++ + N+L++ YAK + AV++F + +D+ISW+T+I +G A+A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 333 LSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDGF----LYFQSMVDH 377
L +F+ M + +P+ T + +L AC TH +R G ++VD
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 378 Y-------------SIIPQIEHYGCMADLLGRA--GLLDQAVSFVRKMPME----PDAVI 418
Y S IP+ + +A + G G+ +++ M +E PDA++
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELE-PKNPANFVMLSNIYKDLGRWQDVARL--KIA 475
+LG+C +E A+ ++I+ NP L +Y G + +++ IA
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 476 MRDT 479
++DT
Sbjct: 429 LKDT 432
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 47/268 (17%)
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
V AR++F +M R + WNTLL +R
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLK-------------------------------SLSREK 39
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES-IGYKGNMFV 284
++ + L F M + + P++FTL L AC L ++ G+ +H + + + +++V
Sbjct: 40 QWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYV 98
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
G++LI MY KCG + A+ +F+ L++ DI++W++M++G +G+ A+ F +M + +
Sbjct: 99 GSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASD 158
Query: 345 -QPDGVTFVGILSACT-----HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
PD VT + ++SACT +G GF+ + + S++ + C A ++
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSL--LNCYA----KSR 212
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+AV+ KM E D + W++++ AC
Sbjct: 213 AFKEAVNLF-KMIAEKDVISWSTVI-AC 238
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 294/543 (54%), Gaps = 23/543 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+F M +T TWN M +GY + + + F EM + P + T ++ S S
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-DAITFSSLLPSVS 351
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K + +Q+HC + + FL +ALI+ Y V A +F + +VVV+TA
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 124 MISAYISCGDVGSGRRL------LDLAPERDVVMWSIVISGYIESGDMVSAREL------ 171
MIS Y+ G + + ++P ++ + + G + + + REL
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL--GRELHGFIIK 469
Query: 172 --FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
FD N +++ YA G + ++FE + +R++ SWN +I A++ S
Sbjct: 470 KGFDNRCNIGC----AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A++ F+QM V G + + ++ A L AC+ L + GK +H + +++ + LI
Sbjct: 526 AIDIFRQMGVSG-ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDG 348
DMYAKCG +++A++VF + ++I+SWN++I HG D+L LF +M + S +PD
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+TF+ I+S+C H+G V +G +F+SM + Y I PQ EHY C+ DL GRAG L +A V+
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
MP PDA +W +LLGACR HKNVE+AE+A L++L+P N +V++SN + + W+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
V +++ M++ +K+PG S IE N F S D HPE+ IY L L LRL GY
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824
Query: 529 VPN 531
+P
Sbjct: 825 IPQ 827
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 210/462 (45%), Gaps = 12/462 (2%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+FD++ + + WN M NGY+ + V+ F+ M +P N T V+ C+
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP-NAVTFDCVLSVCASK 252
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G Q+H + G + + +L+ MYS G DA K+F M + V W MI
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP--------N 177
S Y+ G + V+ +I S + S E ++ +
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
D+ + L++ Y V + +F + +V + +I GY NG + D+LE F+
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR-W 431
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
LV+ + PN+ TLV++L L AL +G+ +H + G+ +G A+IDMYAKCG
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+ A ++F L +RDI+SWN+MI A N + A+ +F QM S D V+ LSA
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C ++ G M+ H S+ + + D+ + G L A++ + M E + V
Sbjct: 552 CANLPSESFGKAIHGFMIKH-SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIV 609
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
W S++ AC H ++ + F ++E P L I
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 153/315 (48%), Gaps = 15/315 (4%)
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
L +++++CS +R+G+QVH +S+ ++ MY+ GS D K+F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 115 ERNVVV--WTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSA 168
R + W ++IS+++ G + ++L DV + ++ + +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 169 RELFDKMPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
L D + + + ++L+ Y G + K+F+ + +++ WNV++ GYA+
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNM 282
G ++ F M ++ + PN T VL C+ +D+G +H V + ++G+
Sbjct: 218 GALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS- 275
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ N+L+ MY+KCG + A +F + R D ++WN MI+G G ++L+ F +M +S
Sbjct: 276 -IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 343 REQPDGVTFVGILSA 357
PD +TF +L +
Sbjct: 335 GVLPDAITFSSLLPS 349
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 38/334 (11%)
Query: 136 SGRRLLDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG 194
S R L + P R +++ + + G V A + + + D + +L YA G
Sbjct: 26 SSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISG-DSYTDERILGMYAMCG 84
Query: 195 DVGSFEKVFEEMPER--NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVA 252
K+F + R ++ WN +I + RNG + AL + +ML G V P+ T
Sbjct: 85 SFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPC 143
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
++ AC L ++ S+G N FV ++LI Y + G I+ +F+ + ++D
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM----------G 362
+ WN M+NG A G + F M+ + P+ VTF +LS C G
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 363 LVRDGFLYFQ-----SMVDHYSIIPQIEH---------------YGCMADLLGRAGLLDQ 402
LV + F+ S++ YS + + + CM ++GL+++
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 403 AVSFVRKMPME---PDAVIWTSLLGACRTHKNVE 433
+++F +M PDA+ ++SLL + +N+E
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 43/268 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+++ + + +WN+M + +++ + +F +M + + ++ +
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC-YDCVSISAALS 550
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ + G+ +H K + + + LI+MY+ G++ A VF M E+N+V
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-D 179
W ++I+A CG+ G + L L E+ +K R D
Sbjct: 611 WNSIIAA---CGNHGKLKDSLCL------------------------FHEMVEKSGIRPD 643
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEM-------PERNVYSWNVLIGGYARNGRFSDALE 232
+++ +++ + GDV + F M P++ Y+ ++ + R GR ++A E
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA--CVVDLFGRAGRLTEAYE 701
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRL 260
K M P D + LL RL
Sbjct: 702 TVKSM-----PFPPDAGVWGTLLGACRL 724
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 293/541 (54%), Gaps = 14/541 (2%)
Query: 1 MGHARKVFDKM-PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M AR++FD++ N TW AM +GY ++ +LF EM N ++
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN-----TMI 147
Query: 60 RSCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+++G + + ++ +R WNS + AL++ +G + +A +F MP R+V
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNIVSWNS-MVKALVQ----RGRIDEAMNLFERMPRRDV 202
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V WTAM+ G V RRL D PER+++ W+ +I+GY ++ + A +LF MP R
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D SWNT++ G+ + ++ +F+ MPE+NV SW +I GY N +AL F +ML
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+G V PN T V++L ACS L L G+ +H ++ N V +AL++MY+K G +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 299 ESAVDVFN--CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+A +F+ + +RD+ISWN+MI A HG+ +A+ +++QM+ +P VT++ +L
Sbjct: 383 IAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLF 442
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC+H GLV G +F+ +V S+ + EHY C+ DL GRAG L +F+
Sbjct: 443 ACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSR 502
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
+ ++L AC H V IA+ + ++E + +V++SNIY G+ ++ A +++ M
Sbjct: 503 SFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKM 562
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVA 536
++ G +K PGCS ++ F D+ HP+ E++ L L +R + V + + A
Sbjct: 563 KEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEA 622
Query: 537 Q 537
+
Sbjct: 623 E 623
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 79/440 (17%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER-DVVMWSIVISGY 159
G + +A K+F +PER+VV WT +I+ YI GD+ R L D R +VV W+ ++SGY
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ S + A LF +MP R+V+SWNT+++GYA SG + ++F+EMPERN+ SWN ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
+ GR +A+ F++M DVV + A++ ++ G +D + + +
Sbjct: 180 ALVQRGRIDEAMNLFERM-PRRDVV----SWTAMVDGLAKNGKVDEARRLF----DCMPE 230
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
N+ NA+I YA+ I+ A +F + RD SWNTMI G + A LFD+M
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 340 ------------------KNSRE--------------QPDGVTFVGILSACTHMGLVRDG 367
K + E +P+ T+V ILSAC+ + + +G
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 368 FLYFQ---------------SMVDHYS----IIPQIEHYG----CMADLLGRAGLL---- 400
Q ++++ YS +I + + C DL+ ++
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 401 -----DQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE--PKNP 450
+A+ +RK +P AV + +LL AC VE F+ L+ E P
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 470
Query: 451 ANFVMLSNIYKDLGRWQDVA 470
++ L ++ GR +DV
Sbjct: 471 EHYTCLVDLCGRAGRLKDVT 490
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LI K G I A +F+ L RD+++W +I G G+ +A LFD++ + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---N 108
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VT+ ++S + + FQ M + + + M D ++G +D+A+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPER-----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+MP E + V W S++ A ++ A F+ +
Sbjct: 164 DEMP-ERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 295/605 (48%), Gaps = 79/605 (13%)
Query: 4 ARKVFDKMP--EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
AR VF+K P +T +NAM G+S + LF +M P N FT V+
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN-FTFASVLAG 157
Query: 62 CS-KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGS----VGDAYKVFGEMPER 116
+ A ++ Q H A K G + + + AL+ +YS S + A KVF E+ E+
Sbjct: 158 LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEK 217
Query: 117 NVVVWT--------------------------------AMISAYISCGDVGSG----RRL 140
+ WT AMIS Y++ G RR+
Sbjct: 218 DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM 277
Query: 141 LDLAPERDVVMWSIVI----------------------------------SGYIESGDMV 166
+ E D + VI S Y + G
Sbjct: 278 VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFD 337
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
AR +F+KMP +D++SWN LL+GY +SG +G + +F+EM E+N+ SW ++I G A NG
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+ L+ F M EG P D+ + +C+ LGA G+ H IG+ ++ GN
Sbjct: 398 GEEGLKLFSCMKREG-FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGN 456
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
ALI MYAKCGV+E A VF + D +SWN +I L HG+ A+A+ ++++M +P
Sbjct: 457 ALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRP 516
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
D +T + +L+AC+H GLV G YF SM Y I P +HY + DLL R+G A S
Sbjct: 517 DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV 576
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+ +P +P A IW +LL CR H N+E+ +A L L P++ +++LSN++ G+W
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
++VAR++ MRD G +K CS IE V F D HPE E++Y L+ L +R
Sbjct: 637 EEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Query: 527 GYVPN 531
GYVP+
Sbjct: 697 GYVPD 701
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 186/460 (40%), Gaps = 119/460 (25%)
Query: 82 GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL 141
GF+ + + LI++Y + A ++F E+ E + + T M+S Y + GD+ R +
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVF 103
Query: 142 DLAP--ERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGD 195
+ AP RD VM++ +I+G+ + D SA LF KM + D ++ ++L G A D
Sbjct: 104 EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD 163
Query: 196 ----------------------------------------VGSFEKVFEEMPERNVYSWN 215
+ S KVF+E+ E++ SW
Sbjct: 164 DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWT 223
Query: 216 VLIGGYARNGRF--------------------------------SDALEAFKQMLVEGDV 243
++ GY +NG F +ALE ++M+ G +
Sbjct: 224 TMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-I 282
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYA---ESIGYKGNMFVGNALIDMYAKCGVIES 300
++FT +V+ AC+ G L +GK VH Y E + + N+L+ +Y KCG +
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDE 338
Query: 301 AVDVFNCLDRRDIISWNT-------------------------------MINGLAMHGNT 329
A +F + +D++SWN MI+GLA +G
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
+ L LF MK +P F G + +C +G +G Y ++ +
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNA 457
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ + + G++++A R MP D+V W +L+ A H
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQH 496
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 171/369 (46%), Gaps = 52/369 (14%)
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP--ERNVY 212
+I Y +S ++ AR+LFD++ D ++ T+++GY SGD+ VFE+ P R+
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
+N +I G++ N A+ F +M EG P++FT +VL + L A D + V +
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEG-FKPDNFTFASVLAGLA-LVADDEKQCVQFH 172
Query: 273 AESI----GYKGNMFVGNALIDMYAKCG----VIESAVDVFNCLDRRDIISW-------- 316
A ++ GY + V NAL+ +Y+KC ++ SA VF+ + +D SW
Sbjct: 173 AAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 317 ------------------------NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
N MI+G G +AL + +M +S + D T+
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
++ AC GL++ G ++ ++ + L + G D+A + KMP
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPA 348
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+ D V W +LL + ++ A+L F+ E++ KN +++++ + + G ++ +L
Sbjct: 349 K-DLVSWNALLSGYVSSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 473 KIAMRDTGF 481
M+ GF
Sbjct: 405 FSCMKREGF 413
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 21/240 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A+ +F +M E N +W M +G + + + LF+ M R P + + ++
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD-YAFSGAIK 425
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ GA G+Q H K GF + ALI MY+ G V +A +VF MP + V
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFD 173
W A+I+A G G G +D+ E D + V++ +G + R+ FD
Sbjct: 486 WNALIAAL---GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542
Query: 174 KM-------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS-WNVLIGGYARNG 225
M P D + L++ SG E V E +P + W L+ G +G
Sbjct: 543 SMETVYRIPPGAD--HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 259/441 (58%), Gaps = 20/441 (4%)
Query: 114 PERNVVVWTAMI------SAYI------SCGDVGSGR-------RLLDLAPERDVVMWSI 154
PER+++++ M+ +AY +C ++ + ++ L E DV +
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNS 155
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
+I+ Y +G+ A LFD++P D +SWN+++ GY +G + +F +M E+N SW
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+I GY + +AL+ F +M DV P++ +L L AC++LGAL+ GKW+H Y
Sbjct: 216 TTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ + +G LIDMYAKCG +E A++VF + ++ + +W +I+G A HG+ +A+S
Sbjct: 275 KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
F +M+ +P+ +TF +L+AC++ GLV +G L F SM Y++ P IEHYGC+ DLL
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLL 394
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
GRAGLLD+A F+++MP++P+AVIW +LL ACR HKN+E+ E + LI ++P + +V
Sbjct: 395 GRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 454
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+NI+ +W A + M++ G K+PGCS I + EF + D HPE E I
Sbjct: 455 HKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQS 514
Query: 515 ALRGLTMLLRLHGYVPNLVDV 535
R + L +GYVP L ++
Sbjct: 515 KWRIMRRKLEENGYVPELEEM 535
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 43/369 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A+ VFD P+T WN M G+S ++ ++L+ M ++AP N +T P +++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRM-LCSSAPHNAYTFPSLLK 123
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS A E Q+H K G++ + + +LI Y+ G+ A+ +F +PE + V
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W ++I Y+ G + L E++ + W+ +ISGY+++ A +LF +M N DV
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 181 MSWN---------------------------------------TLLNGYANSGDVGSFEK 201
N L++ YA G++ +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF+ + +++V +W LI GYA +G +A+ F +M G + PN T AVL ACS G
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVLTACSYTG 362
Query: 262 ALDMGKWVHVYAE-SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
++ GK + E K + ++D+ + G+++ A + + + + W +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 320 INGLAMHGN 328
+ +H N
Sbjct: 423 LKACRIHKN 431
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 299/548 (54%), Gaps = 17/548 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++F++M + + TWN + Y E+ + LF MN + L +++C+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS-DGACLASTLKACT 540
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ +G+QVHC++ K G + ++LI+MYS G + DA KVF +PE +VV A
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNRD 179
+I+ Y S ++ L R V + ++ ++ + + + ++ R
Sbjct: 601 LIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 180 VMSWN-----TLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEA 233
S +LL Y NS + +F E+ +++ W ++ G+++NG + +AL+
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+K+M +G V+P+ T V VL CS L +L G+ +H + + + N LIDMYA
Sbjct: 720 YKEMRHDG-VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYA 778
Query: 294 KCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KCG ++ + VF+ + RR +++SWN++ING A +G DAL +FD M+ S PD +TF+
Sbjct: 779 KCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+L+AC+H G V DG F+ M+ Y I +++H CM DLLGR G L +A F+ +
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL 898
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+PDA +W+SLLGACR H + E++ + LIELEP+N + +V+LSNIY G W+ L
Sbjct: 899 KPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANAL 958
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV-PN 531
+ MRD G +K+PG S I+ F + D+ H E I L L L++ V P+
Sbjct: 959 RKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Query: 532 LVDVAQGT 539
+V+ QG+
Sbjct: 1019 IVE--QGS 1024
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 216/521 (41%), Gaps = 88/521 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A K FD + E + WN+M + YS V+ F + P N FT IV+
Sbjct: 111 VSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFP-NKFTFSIVLS 168
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ V G Q+HC K G + NS+ AL++MY+ + DA +VF + + N V
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC 228
Query: 121 WTAM-----------------------------------ISAYISCGDVGSGRRLLDLAP 145
WT + I+ YI G + R L
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL------------------ 187
DVV W+++ISG+ + G A E F M V S + L
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 188 ------------NGYANSGDVGSFEK---------VFEEMPERNVYSWNVLIGGYARNGR 226
N Y S V + K VFE + E+N WN +I GYA NG
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+E F M G + +DFT ++L C+ L+MG H N+FVGN
Sbjct: 409 SHKVMELFMDMKSSGYNI-DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL+DMYAKCG +E A +F + RD ++WNT+I N ++A LF +M
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE---HYG-CMADLLGRAGLLDQ 402
DG L ACTH+ LY V S+ ++ H G + D+ + G++
Sbjct: 528 DGACLASTLKACTHV-----HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
A +P +V+ + L A + N+E A + FQ ++
Sbjct: 583 ARKVFSSLP--EWSVVSMNALIAGYSQNNLEEAVVLFQEML 621
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 185/435 (42%), Gaps = 78/435 (17%)
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
A A+R G+ VH + G L A++++Y+ V A K F + E++V W +M
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSM 131
Query: 125 ISAYISCGDVGS-----------------------------------GRR----LLDLAP 145
+S Y S G G GR+ ++ +
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG----DVGSFEK 201
ER+ ++ Y + + AR +F+ + + + + W L +GY +G V FE+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 202 -------------------------------VFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+F EM +V +WNV+I G+ + G + A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+E F M + V TL +VL A + LD+G VH A +G N++VG++L+
Sbjct: 312 IEYFFNMR-KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY+KC +E+A VF L+ ++ + WN MI G A +G + + LF MK+S D T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F +LS C + G F S++ + + + D+ + G L+ A +M
Sbjct: 431 FTSLLSTCAASHDLEMGS-QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 411 PMEPDAVIWTSLLGA 425
+ D V W +++G+
Sbjct: 490 -CDRDNVTWNTIIGS 503
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 40/321 (12%)
Query: 165 MVSARELFDKMPNRDVMSW----------------------NTLLNGYANSGDVGSFEKV 202
+ +R++FD+MP R ++ N +++ YA V EK
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+ + E++V +WN ++ Y+ G+ L +F L E + PN FT VL C+R
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVS-LFENQIFPNKFTFSIVLSTCARETN 175
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
++ G+ +H +G + N + G AL+DMYAKC I A VF + + + W + +G
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G +A+ +F++M++ +PD + FV +++ +G ++D L F M P
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----P 290
Query: 383 QIEHYGCMADLLGRAGLLDQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ + M G+ G A+ + +RK ++ S+L A N+++ +
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 440 QHLIELEPKNPANFVMLSNIY 460
I+L + SNIY
Sbjct: 351 AEAIKLG--------LASNIY 363
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 284/533 (53%), Gaps = 13/533 (2%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A KVF++MPE + TWNAM +G+ + LF EM P + T+ +++S
Sbjct: 105 YAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITP-DSVTVMTLIQSA 163
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVV 120
S +++ E +H V + G + I Y G + A VF + +R VV
Sbjct: 164 SFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS 223
Query: 121 WTAMISAYISCGDV--GSGRRLLDLAPERDVVMWSIV-ISGYIESGDMVSARELFDKMP- 176
W +M AY G+ G L L E + + + ++ ++ + ++ L
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
++D+ + NT ++ Y+ S D S +F+ M R SW V+I GYA G +AL
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALIDM 291
F M+ G+ P+ TL++++ C + G+L+ GKW+ A+ G K N+ + NALIDM
Sbjct: 344 LFHAMIKSGEK-PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG I A D+F+ + +++W TMI G A++G +AL LF +M + +P+ +TF
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +L AC H G + G+ YF M Y+I P ++HY CM DLLGR G L++A+ +R M
Sbjct: 463 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMS 522
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+PDA IW +LL AC+ H+NV+IAE A + L LEP+ A +V ++NIY G W AR
Sbjct: 523 AKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFAR 582
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
++ M+ +K PG SVI+ N F + H E E IY L GL++ +
Sbjct: 583 IRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK 635
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 199/444 (44%), Gaps = 34/444 (7%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTAL 93
+ ++LF EM R P N+FT P V ++C++ V E VH K F + F+ TA
Sbjct: 35 ESLLLFREMKRGGFEP-NNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
++M+ SV A KVF MPER+ W AM+S + G L ++ S
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 154 IVISGYIESGDMVSARELFDKMP--------NRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
+ + I+S + +L + M + V NT ++ Y GD+ S + VFE
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 206 MP--ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ +R V SWN + Y+ G DA + ML E + P+ T + + +C L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-EFKPDLSTFINLAASCQNPETL 272
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
G+ +H +A +G ++ N I MY+K SA +F+ + R +SW MI+G
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
A G+ +AL+LF M S E+PD VT + ++S C G + G +D + I
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-----KWIDARADI-- 385
Query: 384 IEHYGC----------MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
YGC + D+ + G + +A P E V WT+++ +
Sbjct: 386 ---YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFL 441
Query: 434 IAELAFQHLIELEPKNPANFVMLS 457
A F +I+L+ K P + L+
Sbjct: 442 EALKLFSKMIDLDYK-PNHITFLA 464
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
+V +WN+ I ++L F++M G PN+FT V AC+RL + + V
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
H + + ++FVG A +DM+ KC ++ A VF + RD +WN M++G G+T
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACT 359
A SLF +M+ + PD VT + ++ + +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 281/510 (55%), Gaps = 23/510 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A +F+KMPE N +W+AM G+ VVLF +M ++PL ++
Sbjct: 152 IGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKN 211
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE----- 115
A G+ V+ + + LI Y +G V A +F ++P+
Sbjct: 212 ERLSEAAWVLGQYGSLVSGREDL---VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDD 268
Query: 116 ----------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
+NVV W +MI AY+ GDV S R L D +RD + W+ +I GY+ M
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A LF +MPNRD SWN +++GYA+ G+V FE+ PE++ SWN +I Y +N
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFV 284
+ +A++ F +M +EG+ P+ TL ++L A + L L +G +H + +++ ++ V
Sbjct: 389 DYKEAVDLFIRMNIEGEK-PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV--IPDVPV 445
Query: 285 GNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
NALI MY++CG I + +F+ + +R++I+WN MI G A HGN ++AL+LF MK++
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
P +TFV +L+AC H GLV + F SM+ Y I PQ+EHY + ++ G ++A
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+ + MP EPD +W +LL ACR + NV +A +A + + LEP++ +V+L N+Y D+
Sbjct: 566 MYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADM 625
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
G W + +++++ M +K G S ++ +
Sbjct: 626 GLWDEASQVRMNMESKRIKKERGSSWVDSS 655
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 190/377 (50%), Gaps = 36/377 (9%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + +A +F ++ RN V W MIS Y+ ++ R+L D+ P+RDVV W+ +ISGY+
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 161 ESGD---MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
G + AR+LFD+MP+RD SWNT+++GYA + +G +FE+MPERN SW+ +
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL--GALDMGKWVHVYAES 275
I G+ +NG A+ F++M V+ D P LVA L+ RL A +G++ + +
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVK-DSSP-LCALVAGLIKNERLSEAAWVLGQYGSLVS-- 229
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFN-----CLDR----------RDIISWNTMI 320
G + ++ N LI Y + G +E+A +F+ C D ++++SWN+MI
Sbjct: 230 -GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
G+ A LFDQMK+ D +++ ++ H+ + D F F M +
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNR--- 341
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV-EIAELAF 439
+ M G ++ A + K P E V W S++ A +K+ E +L
Sbjct: 342 --DAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 440 QHLIELEPKNPANFVML 456
+ IE E +P L
Sbjct: 399 RMNIEGEKPDPHTLTSL 415
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 21/272 (7%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N LN SG + +FE++ RN +WN +I GY + + A + F M V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
N T+++ ++C + L+ + + S + F N +I YAK I A+
Sbjct: 104 TWN--TMISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALL 157
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS------A 357
+F + R+ +SW+ MI G +G A+ LF +M P G++ A
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 358 CTHMG----LV--RDGFLY-FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+G LV R+ +Y + +++ Y Q+E C+ D + D F +
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF 277
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ V W S++ A +V A L F +
Sbjct: 278 C--KNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 286/537 (53%), Gaps = 19/537 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYS--LTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+AR++ ++ + W+++ +S +T + R + + M R P H T P +++
Sbjct: 54 YARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRH-TFPPLLK 112
Query: 61 SCSKAGAVREGE--QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ K +R+ Q H K G + F+ +LI YS+ G A ++F +++V
Sbjct: 113 AVFK---LRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 119 VVWTAMISAYISCGDVGSGR------RLLDLAPERDVVMWSIVISGYIES---GDMVSAR 169
V WTAMI ++ G + +A V+ + +G +E G V
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L DV ++L++ Y +KVF+EMP RNV +W LI GY ++ F
Sbjct: 230 YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK 289
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
+ F++ML + DV PN+ TL +VL AC+ +GAL G+ VH Y + N G LI
Sbjct: 290 GMLVFEEML-KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
D+Y KCG +E A+ VF L +++ +W MING A HG DA LF M +S P+ V
Sbjct: 349 DLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEV 408
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+ +LSAC H GLV +G F SM +++ P+ +HY CM DL GR GLL++A + + +
Sbjct: 409 TFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIER 468
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MPMEP V+W +L G+C HK+ E+ + A +I+L+P + + +L+N+Y + W +V
Sbjct: 469 MPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEV 528
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP-ETESIYRALRGLTMLLRL 525
AR++ M+D K PG S IE + EF + D++ P E++ +Y+ L + + +RL
Sbjct: 529 ARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 275/519 (52%), Gaps = 8/519 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVF++MPE + +WN+M +GY ++LF EM + P + F+ + +CS
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKP-DRFSTMSALGACS 242
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + G+++HC A + + + T++++MYS G V A ++F M +RN+V W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS-GYIESGDMVSARELFDKMPNRDVM 181
MI Y G V E++ + ++ S + + ++ R + R +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL 362
Query: 182 SW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
L++ Y G + S E +F+ M E+NV SWN +I Y +NG+ ALE F Q
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF-QE 421
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
L + +VP+ T+ ++L A + +L G+ +H Y Y N + N+L+ MYA CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+E A FN + +D++SWN++I A+HG ++ LF +M SR P+ TF +L+A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+ G+V +G+ YF+SM Y I P IEHYGCM DL+GR G A F+ +MP P A
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
IW SLL A R HK++ IAE A + + ++E N +V+L N+Y + GRW+DV R+K+ M
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
G + S +E F + D H T IY L
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 199/366 (54%), Gaps = 14/366 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++FD+M + + WN M G++ + + V ++ M A + FT P V++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFTYPFVIK 138
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
S + ++ EG+++H + K GF + ++C +LI +Y G DA KVF EMPER++V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIES---GDMVSAREL 171
W +MIS Y++ GD S L P+R M ++ ++ S G + +
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ DVM ++L+ Y+ G+V E++F M +RN+ +WNV+IG YARNGR +DA
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F++M + + P+ T + +L A A+ G+ +H YA G+ +M + ALIDM
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y +CG ++SA +F+ + +++ISWN++I +G AL LF ++ +S PD T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 352 VGILSA 357
IL A
Sbjct: 435 ASILPA 440
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 187 LNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN 246
L G+A+S + ++F+EM + + + WNV+I G+ G + +A++ + +M+ G V +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG-VKAD 129
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
FT V+ + + + +L+ GK +H +G+ +++V N+LI +Y K G A VF
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 307 CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
+ RDI+SWN+MI+G G+ +L LF +M +PD + + L AC+H+ +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMA-----DLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
G + +++ +IE M D+ + G + A M ++ + V W
Sbjct: 250 G-----KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNV 303
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNP 450
++G + V A L FQ + E P
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 277/535 (51%), Gaps = 24/535 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A VF + + WNAM Y+ + + LF M + + P + FTL V+
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP-DSFTLSNVIS 381
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
CS G G+ VH KR + S + +AL+ +YS G DAY VF M E+++V
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 121 WTAMISAYISCGDVGSGRRLL--------DLAPERDVVMWSIVISGYIES--------GD 164
W ++IS G ++ L P+ D++ +E+ G
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
M+ + + V ++L++ Y+ G KVF M N+ +WN +I Y+RN
Sbjct: 502 MIKTGLVLN------VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
+++ F ML +G + P+ ++ +VL+A S +L GK +H Y +G + +
Sbjct: 556 NLPELSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
NALIDMY KCG + A ++F + + +I+WN MI G HG+ ALSLFD+MK + E
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
PD VTF+ ++SAC H G V +G F+ M Y I P +EHY M DLLGRAGLL++A
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
SF++ MP+E D+ IW LL A RTH NVE+ L+ + L+ +EP+ + +V L N+Y + G
Sbjct: 735 SFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
+ A+L M++ G K PGCS IE +D F+S P I+ L L
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 27/453 (5%)
Query: 1 MGHARKVFDKMPEPNTAT-------WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHF 53
+ +A +VFD + + WN+M +GY ++ V F M P + F
Sbjct: 111 LDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRP-DAF 169
Query: 54 TLPIVVRSCSKAGAVR--EGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG 111
+L IVV K G R EG+Q+H + +SFL TALI+MY G DA++VF
Sbjct: 170 SLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFV 229
Query: 112 EMPER-NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
E+ ++ NVV+W MI + G S L LA V + S +G + + S
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ-SENS 288
Query: 171 LFDKMPNRDVMSW---------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY 221
F + + DV+ +LL+ Y+ G VG E VF + ++ + WN ++ Y
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
A N AL+ F M + V+P+ FTL V+ CS LG + GK VH +
Sbjct: 349 AENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+ +AL+ +Y+KCG A VF ++ +D+++W ++I+GL +G +AL +F MK+
Sbjct: 408 STIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 342 SRE--QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
+ +PD + +AC + +R G SM+ ++ + + DL + GL
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGL 526
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
+ A+ M E + V W S++ +C + N+
Sbjct: 527 PEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 179/409 (43%), Gaps = 40/409 (9%)
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF-- 110
FT P ++++CS + G+ +H G++++ F+ T+L+ MY G + A +VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 111 -----GEMPERNVVVWTAMISAYISC----GDVGSGRRLLDLAPERDVVMWSIVISGYIE 161
+ R+V VW +MI Y VG RR+L D SIV+S +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 162 SGDMVSARE--------LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVY 212
G+ RE + + D L++ Y G +VF E+ ++ NV
Sbjct: 181 EGNF--RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGD---VVPNDFTLVAVLLACSRLGALDMGKWV 269
WNV+I G+ +G +L+ + ML + + +V FT L ACS+ G+ +
Sbjct: 239 LWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFT--GALGACSQSENSGFGRQI 294
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
H +G + +V +L+ MY+KCG++ A VF+C+ + + WN M+ A +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG----FLYFQSMVDHYSIIPQIE 385
AL LF M+ PD T ++S C+ +GL G F+ + S I
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES-- 412
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVE 433
+ L + G D V K E D V W SL+ G C+ K E
Sbjct: 413 ---ALLTLYSKCG-CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 282/521 (54%), Gaps = 34/521 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ +++ ++ +W + S ++ V ++ +M+ + P +H + V+R+C
Sbjct: 56 YVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSH-AVTSVLRAC 114
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
K + +G+ +H A K G ++ T L+ +YS G + A K F ++ E+N V W
Sbjct: 115 GKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWN 174
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM----------------- 165
+++ Y+ G++ RR+ D PE+D V W+++IS Y + GDM
Sbjct: 175 SLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS 234
Query: 166 --------VSAREL------FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
V+ RE+ FD MP ++ +SW T+++GY GDV S E++F M +++
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV-PNDFTLVAVLLACSRLGALDMGKWVH 270
++ +I Y +NG+ DAL+ F QML + P++ TL +V+ A S+LG G WV
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
Y G K + + +LID+Y K G A +F+ L+++D +S++ MI G ++G
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+A SLF M + P+ VTF G+LSA +H GLV++G+ F SM DH ++ P +HYG M
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH-NLEPSADHYGIM 473
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
D+LGRAG L++A ++ MPM+P+A +W +LL A H NVE E+A H ++LE
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 533
Query: 451 ANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
L+ IY +GRW D ++ ++++ K GCS +E
Sbjct: 534 GYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 141/376 (37%), Gaps = 95/376 (25%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR+VFDK+PE + +WN + + Y+ + LF+ M + A N
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWN--------- 236
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ G V+C K A F MP++N V
Sbjct: 237 -------ILIGGYVNCREMKL------------------------ARTYFDAMPQKNGVS 265
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD- 179
W MIS Y GDV S L L ++D +++ +I+ Y ++G A +LF +M R+
Sbjct: 266 WITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 325
Query: 180 -----------VMSWN-----------------------------TLLNGYANSGDVGSF 199
V+S N +L++ Y GD
Sbjct: 326 YIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKA 385
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
K+F + +++ S++ +I G NG ++A F M +E + PN T +L A S
Sbjct: 386 FKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM-IEKKIPPNVVTFTGLLSAYSH 444
Query: 260 LGALDMGKWV------HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-D 312
G + G H S + G M +DM + G +E A ++ + + +
Sbjct: 445 SGLVQEGYKCFNSMKDHNLEPSADHYGIM------VDMLGRAGRLEEAYELIKSMPMQPN 498
Query: 313 IISWNTMINGLAMHGN 328
W ++ +H N
Sbjct: 499 AGVWGALLLASGLHNN 514
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 268/498 (53%), Gaps = 43/498 (8%)
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
+ A R F +N+ L + +G + A+ + + ++V+ +++ Y CG +
Sbjct: 56 IPADRRF-YNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 137 GRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDVMS-------- 182
R++ + P+RD V W+ +ISGY + A F++M PN +S
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 183 -------------------------WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
+ LL+ Y G + + VF+ + RN SWN L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
I G+AR ALE F+ ML +G P+ F+ ++ ACS G L+ GKWVH Y G
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
K F GN L+DMYAK G I A +F+ L +RD++SWN+++ A HG +A+ F+
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+M+ +P+ ++F+ +L+AC+H GL+ +G+ Y++ M I+P+ HY + DLLGRA
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRA 411
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
G L++A+ F+ +MP+EP A IW +LL ACR HKN E+ A +H+ EL+P +P V+L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 458 NIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
NIY GRW D AR++ M+++G +K P CS +E +++ F + DERHP+ E I R
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 518 GLTMLLRLHGYVPNLVDV 535
+ ++ GYVP+ V
Sbjct: 532 EVLAKIKELGYVPDTSHV 549
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 13/336 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVF+KMP+ + TW + +GYS + D ++ F +M R +P N FTL V+++ +
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP-NEFTLSSVIKAAA 172
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G Q+H K GF N + +AL+++Y+ G + DA VF + RN V W A
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 124 MISAYISCGDVGSGRRLLD------LAPER---DVVMWSIVISGYIESGDMVSARELFDK 174
+I+ + L P + + +G++E G V A +
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY-MIKS 291
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ NTLL+ YA SG + K+F+ + +R+V SWN L+ YA++G +A+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++M G + PN+ + ++VL ACS G LD G + + G + ++D+ +
Sbjct: 352 EEMRRVG-IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 295 CGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNT 329
G + A+ + + W ++N MH NT
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 446
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+ VFD + N +WNA+ G++ + LF M R P +HF+ +
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP-SHFSYASLFG 270
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS G + +G+ VH K G K +F L++MY+ GS+ DA K+F + +R+VV
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 121 WTAMISAY--------------------------------ISCGDVG---SGRRLLDLAP 145
W ++++AY +C G G +L
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Query: 146 ERDVV----MWSIVISGYIESGDMVSARELFDKMPNRDVMS-WNTLLNG--YANSGDVGS 198
+ +V + V+ +GD+ A ++MP + W LLN + ++G+
Sbjct: 391 KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGA 450
Query: 199 F--EKVFE---EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+ E VFE + P +V +N+ YA GR++DA K+M G
Sbjct: 451 YAAEHVFELDPDDPGPHVILYNI----YASGGRWNDAARVRKKMKESG 494
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 239 VEGDVVPNDFTLVAVLLA-CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+EG +P D LL C+ L G+ VH + ++ ++ +GN L++MYAKCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+E A VF + +RD ++W T+I+G + H DAL F+QM P+ T ++ A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 358 --------CTHMGLVRDGFLY---FQSMVDHYSIIPQIEHYG-CMADLLGRAGLLDQAVS 405
C H GF F S V H G + DL R GL+D A
Sbjct: 171 AAAERRGCCGHQ---LHGFCVKCGFDSNV----------HVGSALLDLYTRYGLMDDAQL 217
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
+ D V W +L+ E A FQ ++ + P++F S
Sbjct: 218 VFDALESRND-VSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYAS 267
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 292/543 (53%), Gaps = 18/543 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
AR +FD+MP+ + W AM GY+ + + F EM + +P N FTL V++SC
Sbjct: 63 EARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP-NEFTLSSVLKSC 121
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG-SVGDAYKVFGEMPERNVVVW 121
+ G VH V K G + + ++ A++ MY+ ++ A +F ++ +N V W
Sbjct: 122 RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTW 181
Query: 122 TAMISAYISCGDVGSGRRLLD--LAPERDVVMWSIVI----SGYIESGDMVSARELFDKM 175
T +I+ + GD G ++ L +V + I I S I+S + + +++ +
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTTGKQIHASV 239
Query: 176 PNRDVMS----WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R S N++L+ Y G + + F EM ++++ +WN LI R+ S+AL
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEAL 298
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F++ +G VPN +T +++ AC+ + AL+ G+ +H G+ N+ + NALIDM
Sbjct: 299 LMFQRFESQG-FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 292 YAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
YAKCG I + VF +DRR+++SW +M+ G HG A+A+ LFD+M +S +PD +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F+ +LSAC H GLV G YF M Y I P + Y C+ DLLGRAG + +A V +M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 411 PMEPDAVIWTSLLGACRTHK-NVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
P +PD W ++LGAC+ HK N I+ LA + ++EL+PK +VMLS IY G+W D
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
AR++ MR G +K G S I + V F D+ P S+Y L L R GYV
Sbjct: 538 ARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYV 597
Query: 530 PNL 532
P L
Sbjct: 598 PEL 600
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 198/437 (45%), Gaps = 52/437 (11%)
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
+P VRS + V + K K + L T LI Y KG V +A +F EMP
Sbjct: 15 IPNFVRSSLRNAGVESSQNTEYPPYKP--KKHHILATNLIVSYFEKGLVEEARSLFDEMP 72
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES---------GDM 165
+R+VV WTAMI+ Y S ++ +S ++S G +
Sbjct: 73 DRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGAL 132
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYAN-SGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
V + M + N ++N YA S + + +F ++ +N +W LI G+
Sbjct: 133 VHGVVVKLGMEGSLYVD-NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHL 191
Query: 225 GRFSDALEAFKQMLVE-GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G L+ +KQML+E +V P + + + A + + ++ GK +H G++ N+
Sbjct: 192 GDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLP 249
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
V N+++D+Y +CG + A F+ ++ +D+I+WNT+I+ L ++++AL +F + ++
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQG 308
Query: 344 EQPDGVTFVGILSACT-----------HMGLVRDGF----LYFQSMVDHYSI---IPQIE 385
P+ TF +++AC H + R GF +++D Y+ IP +
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 386 H-YGCMADL------------LGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTH 429
+G + D G G +AV KM + PD +++ ++L ACR H
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACR-H 427
Query: 430 KNVEIAELAFQHLIELE 446
+ L + +++E E
Sbjct: 428 AGLVEKGLKYFNVMESE 444
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 281/499 (56%), Gaps = 18/499 (3%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
++ ++N + + Y++ + R + + +P + FT P V ++C K +REG+Q+
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSP-DMFTFPPVFKACGKFSGIREGKQI 128
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG-- 132
H + K GF + ++ +L+ Y G +A KVFGEMP R+VV WT +I+ + G
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 133 -DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM----SWNTLL 187
+ +D+ P + +V SG + G + + + + R + + N L+
Sbjct: 189 KEALDTFSKMDVEPNLATYVCVLVSSGRV--GCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 188 NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND 247
+ Y + +VF E+ +++ SWN +I G R +A++ F M + P+
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
L +VL AC+ LGA+D G+WVH Y + G K + +G A++DMYAKCG IE+A+++FN
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ +++ +WN ++ GLA+HG+ ++L F++M +P+ VTF+ L+AC H GLV +G
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEG 426
Query: 368 FLYFQSMVD-HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
YF M Y++ P++EHYGCM DLL RAGLLD+A+ V+ MP++PD I ++L AC
Sbjct: 427 RRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC 486
Query: 427 RTHKNV-EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
+ + E+ + +++E ++ +V+LSNI+ RW DVAR++ M+ G K+P
Sbjct: 487 KNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVP 546
Query: 486 GCSVIECNDSVVEFYSLDE 504
G S IE +F +LD+
Sbjct: 547 GSSYIE------KFMTLDQ 559
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 154/316 (48%), Gaps = 22/316 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A KVF +MP + +W + G++ T +++ + F++M+ P N T V+ S
Sbjct: 159 NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEP-NLATYVCVLVSS 214
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G + G+ +H + KR + ALI+MY + DA +VFGE+ +++ V W
Sbjct: 215 GRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWN 274
Query: 123 AMISAYISCGDVGSGRRLLDLAP-----ERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
+MIS + C L L + D + + V+S G + R + + +
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 178 RDVMSWNT-----LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ W+T +++ YA G + + ++F + +NV++WN L+GG A +G ++L
Sbjct: 335 AGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLR 393
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG----NAL 288
F++M+ G PN T +A L AC G +D G+ +S Y N+F +
Sbjct: 394 YFEEMVKLG-FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREY--NLFPKLEHYGCM 450
Query: 289 IDMYAKCGVIESAVDV 304
ID+ + G+++ A+++
Sbjct: 451 IDLLCRAGLLDEALEL 466
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 33/267 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +VF ++ + + +WN+M +G E ++ + LF+ M ++ + L V+
Sbjct: 255 LSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLS 314
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ GAV G VH G KW++ + TA+++MY+ G + A ++F + +NV
Sbjct: 315 ACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 121 WTAMISAYISCGDVGSGRR----LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W A++ G R ++ L + ++V + ++ +G + R F KM
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+R+ + P+ Y +I R G +ALE K
Sbjct: 435 SRE-----------------------YNLFPKLEHY--GCMIDLLCRAGLLDEALELVKA 469
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGAL 263
M V+ DV A+L AC G L
Sbjct: 470 MPVKPDVR----ICGAILSACKNRGTL 492
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 237/387 (61%), Gaps = 5/387 (1%)
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
+IS Y E G + S ++F+ +P D + ++ A GDV K+FE MPER+ +W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
N +I GYA+ G +AL F M +EG V N +++VL AC++LGALD G+W H Y E
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEG-VKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
K + + L+D+YAKCG +E A++VF ++ +++ +W++ +NGLAM+G L
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
LF MK P+ VTFV +L C+ +G V +G +F SM + + I PQ+EHYGC+ DL
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLY 387
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
RAG L+ AVS +++MPM+P A +W+SLL A R +KN+E+ LA + ++ELE N +V
Sbjct: 388 ARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYV 447
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+LSNIY D W +V+ ++ +M+ G RK PGCSV+E N V EF+ D+ HP+ I
Sbjct: 448 LLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDA 507
Query: 515 ALRGLTMLLRLHGY----VPNLVDVAQ 537
+ ++ LRL GY P + D+ +
Sbjct: 508 VWKDISRRLRLAGYKADTTPVMFDIDE 534
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 43/370 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAE-MNRAAAAPLNHFTLPIVV 59
+ +A ++ D+ +P N+M + + + ++ +++T+ +V
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C+ G QVH + +RGF + + T LI +Y+ G + +KVF +P + V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD--------------- 164
TAM++A CGDV R+L + PERD + W+ +ISGY + G+
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 165 -------MVSARELFDKMPNRDVMSW-----------------NTLLNGYANSGDVGSFE 200
M+S ++ D W TL++ YA GD+
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+VF M E+NVY+W+ + G A NG LE F M +G V PN T V+VL CS +
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG-VTPNAVTFVSVLRGCSVV 354
Query: 261 GALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNT 318
G +D G + G + + L+D+YA+ G +E AV + + + + W++
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 319 MINGLAMHGN 328
+++ M+ N
Sbjct: 415 LLHASRMYKN 424
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVLLACSR 259
++ + + +++ N +I + ++ + + ++++L G D+ P+++T+ ++ AC+
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN---CLD------- 309
L + G VH G+ + V LI +YA+ G ++S VFN C D
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 310 ---------------------RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
RD I+WN MI+G A G + +AL++F M+ + +G
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
V + +LSACT +G + G + S ++ I + + DL + G +++A+
Sbjct: 241 VAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFW 299
Query: 409 KMPMEPDAVIWTSLL 423
M E + W+S L
Sbjct: 300 GME-EKNVYTWSSAL 313
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 259/443 (58%), Gaps = 19/443 (4%)
Query: 81 RGFKWNSFLCTAL---IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG 137
RGF +SF A+ I+M + SV P+R + + ++ AY G G
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVK---------PQR--LTYPSVFKAYGRLGQARDG 145
Query: 138 RRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANS 193
R+L + E D + + ++ Y+ G ++ A +F M DV++WN+++ G+A
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G + + +F+EMP+RN SWN +I G+ RNGRF DAL+ F++M E DV P+ FT+V++
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMVSL 264
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
L AC+ LGA + G+W+H Y ++ N V ALIDMY KCG IE ++VF C ++ +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
WN+MI GLA +G A+ LF +++ S +PD V+F+G+L+AC H G V +F+
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
M + Y I P I+HY M ++LG AGLL++A + ++ MP+E D VIW+SLL ACR NVE
Sbjct: 385 MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVE 444
Query: 434 IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
+A+ A + L +L+P +V+LSN Y G +++ ++ M++ K GCS IE +
Sbjct: 445 MAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Query: 494 DSVVEFYSLDERHPETESIYRAL 516
V EF S HP++ IY L
Sbjct: 505 FEVHEFISCGGTHPKSAEIYSLL 527
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 163/370 (44%), Gaps = 43/370 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVV 59
M +A VF ++ N WN + G+S + + +F +M + + T P V
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++ + G R+G Q+H + K G + +SF+ ++ MY G + +A+++F M +VV
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
W +MI + CG + + L D P+R+ V W+ +ISG++ +G A ++F +M +D
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 180 VMS----------------------W-----------------NTLLNGYANSGDVGSFE 200
V W L++ Y G +
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VFE P++ + WN +I G A NG A++ F ++ G + P+ + + VL AC+
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSG-LEPDSVSFIGVLTACAHS 372
Query: 261 GALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF-NCLDRRDIISWNT 318
G + ++ + E + ++ ++++ G++E A + N D + W++
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 319 MINGLAMHGN 328
+++ GN
Sbjct: 433 LLSACRKIGN 442
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 169/356 (47%), Gaps = 58/356 (16%)
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM--------PERNVYSWN 215
DM A +F ++ +++ WNT++ G++ S +F +M P+R Y
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP-- 130
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF---TLVAVLLACSRLGALDMGKWVHVY 272
+ Y R G+ D + ++ EG + + F T++ + + C L + W ++
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEG-LEDDSFIRNTMLHMYVTCGCL----IEAW-RIF 184
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
IG+ ++ N++I +AKCG+I+ A ++F+ + +R+ +SWN+MI+G +G DA
Sbjct: 185 LGMIGF--DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDA 242
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMG-----------LVRDGF----LYFQSMVDH 377
L +F +M+ +PDG T V +L+AC ++G +VR+ F + +++D
Sbjct: 243 LDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDM 302
Query: 378 YSIIPQIEH----YGCMAD---------LLGRA--GLLDQAVSFVRKMP---MEPDAVIW 419
Y IE + C +LG A G ++A+ ++ +EPD+V +
Sbjct: 303 YCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Query: 420 TSLLGACRTHKNVEIAELAFQHLIE---LEPKNPANFVMLSNIYKDLGRWQDVARL 472
+L AC V A+ F+ + E +EP + ++ ++ N+ G ++ L
Sbjct: 363 IGVLTACAHSGEVHRADEFFRLMKEKYMIEP-SIKHYTLMVNVLGGAGLLEEAEAL 417
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 286/504 (56%), Gaps = 21/504 (4%)
Query: 4 ARKVFDKMP--EPNTATWNAMFNGYSLTES--HRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A F+++P + N +WN + +GYS +++ + DV++L+ M R ++ F L +
Sbjct: 58 ATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDG-VDSFNLVFAI 116
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C G + G +H +A K G + ++ +L+EMY+ G++ A KVF E+P RN V
Sbjct: 117 KACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSV 176
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVI------SGYIESGDM------VS 167
+W ++ Y+ RL L + + + ++ + G + +G + VS
Sbjct: 177 LWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVS 236
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
R F + D + ++++ Y + + K+FE +RNV W LI G+A+ R
Sbjct: 237 IRRSF--IDQSDYLQ-ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+A + F+QML E ++PN TL A+L++CS LG+L GK VH Y G + + +
Sbjct: 294 VEAFDLFRQMLRE-SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTS 352
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
IDMYA+CG I+ A VF+ + R++ISW++MIN ++G +AL F +MK+ P+
Sbjct: 353 FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPN 412
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTFV +LSAC+H G V++G+ F+SM Y ++P+ EHY CM DLLGRAG + +A SF+
Sbjct: 413 SVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFI 472
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MP++P A W +LL ACR HK V++A + L+ +EP+ + +V+LSNIY D G W+
Sbjct: 473 DNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532
Query: 468 DVARLKIAMRDTGFRKLPGCSVIE 491
V ++ M G+RK G S E
Sbjct: 533 MVNCVRRKMGIKGYRKHVGQSATE 556
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 49/418 (11%)
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVV 120
S+A + +QVH GF+ L ++L Y + A F +P +RN
Sbjct: 15 SQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS 74
Query: 121 WTAMISAYI---SC--GDV----GSGRRLLDLAPERDVV--MWSIVISGYIESGDMVSAR 169
W ++S Y +C DV RR D ++V + + V G +E+G ++
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ + + D ++ +L+ YA G + S +KVF+E+P RN W VL+ GY + + +
Sbjct: 135 AMKNGLDKDDYVA-PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFVGNAL 288
F M G + + TL+ ++ AC + A +GK VH V + ++ ++
Sbjct: 194 VFRLFCLMRDTG-LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI 252
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMY KC ++++A +F R+++ W T+I+G A +A LF QM P+
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 349 VTFVGILSACTHMG-----------LVRDGF----LYFQSMVDHYSIIPQIE-------- 385
T IL +C+ +G ++R+G + F S +D Y+ I+
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 386 -------HYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGACRTHKNVE 433
+ M + G GL ++A+ KM + P++V + SLL AC NV+
Sbjct: 373 MPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 134/306 (43%), Gaps = 73/306 (23%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+KVFD++P N+ W + GY +V LF M R L+ TL +V+
Sbjct: 160 MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM-RDTGLALDALTLICLVK 218
Query: 61 SCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C A + G+ VH V+ +R F + +L ++I+MY + +A K+F +RNVV
Sbjct: 219 ACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVV 278
Query: 120 VWTAMISAY--------------------------------ISCGDVGSGRR-------L 140
+WT +IS + +SC +GS R +
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
+ E D V ++ I Y G++ AR +FD MP R+V+SW++++N
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMIN------------ 386
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+ NG F +AL+ F +M + +VVPN T V++L ACS
Sbjct: 387 -------------------AFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLSACSHS 426
Query: 261 GALDMG 266
G + G
Sbjct: 427 GNVKEG 432
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 292/535 (54%), Gaps = 56/535 (10%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKW--NSFLCTALIEMYSAKGSVGDAY 107
L++ + +++R C+ +R G+++H V G K S+L AL + Y++ G + A
Sbjct: 4 LSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQ 63
Query: 108 KVFGEMP--ERNVVVWTAMISAYISCG--------------------DV------GSGRR 139
K+F E+P E++ V WT ++S++ G DV G +
Sbjct: 64 KLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK 123
Query: 140 LLDLAPERD-------------VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
L DL + V + + ++ Y + G + + +F+++ + V+SW +
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 187 LNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN 246
L+ + +VF EMPERN +W V++ GY G + LE +M+ N
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYA--------ESIGYKGNMFVGNALIDMYAKCGVI 298
TL ++L AC++ G L +G+WVHVYA E Y ++ VG AL+DMYAKCG I
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNI 302
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSA 357
+S+++VF + +R++++WN + +GLAMHG + +F QM RE +PD +TF +LSA
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM--IREVKPDDLTFTAVLSA 360
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+H G+V +G+ F S+ Y + P+++HY CM DLLGRAGL+++A +R+MP+ P+ V
Sbjct: 361 CSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+ SLLG+C H VEIAE + LI++ P N +++SN+Y GR L+ ++R
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLR 479
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
G RK+PG S I NDSV F S D HP T+ IY L + +R GYVP++
Sbjct: 480 KRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV 534
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 52/350 (14%)
Query: 1 MGHARKVFDKMP--EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
M A+K+FD++P E + W + + +S + + LF EM R ++ ++ +
Sbjct: 59 MVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV-EIDDVSVVCL 117
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
C+K + +Q H VA K G + +C AL++MY G V + ++F E+ E++V
Sbjct: 118 FGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSV 177
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V WT ++ + + GR + PER+ V W+++++GY+ +G EL +M R
Sbjct: 178 VSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR 237
Query: 179 -----------------------------------------------DVMSWNTLLNGYA 191
DVM L++ YA
Sbjct: 238 CGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYA 297
Query: 192 NSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
G++ S VF M +RNV +WN L G A +G+ ++ F QM+ E V P+D T
Sbjct: 298 KCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFT 355
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
AVL ACS G +D G G + + ++D+ + G+IE A
Sbjct: 356 AVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 283/525 (53%), Gaps = 13/525 (2%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+VFD+MPE + A+WN + + + + + LF M + P N +L + + +CS+
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP-NSVSLTVAISACSRL 221
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G+++H K+GF+ + ++ +AL++MY + A +VF +MP +++V W +MI
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 126 SAYISCGDVGS-----GRRLLDLAPERDVVMWSIVI----SGYIESGDMVSARELFDKMP 176
Y++ GD S R +++ + SI++ S + G + + +
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY-VIRSVV 340
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
N D+ +L++ Y G+ E VF + + SWNV+I Y G + A+E + Q
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+ G V P+ T +VL ACS+L AL+ GK +H+ + + + +AL+DMY+KCG
Sbjct: 401 MVSVG-VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ A +FN + ++D++SW MI+ HG +AL FD+M+ +PDGVT + +LS
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD- 415
AC H GL+ +G +F M Y I P IEHY CM D+LGRAG L +A +++ P D
Sbjct: 520 ACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDN 579
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A + ++L AC H + + + L+E P + + +++L N+Y W R+++
Sbjct: 580 AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLK 639
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
M++ G RK PGCS IE +D V F++ D H E++Y L L+
Sbjct: 640 MKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQ 236
RDV+ +L+N Y D S VFE R +VY WN L+ GY++N F D LE FK+
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+L VP+ FT V+ A LG +G+ +H GY ++ V ++L+ MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ E+++ VF+ + RD+ SWNT+I+ G AL LF +M++S +P+ V+ +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 357 ACT-----------HMGLVRDGFLYFQSMVDHYSIIPQIEHY--GCMADLLGRAGLLDQA 403
AC+ H V+ GF +++ Y + D+ G+ L+ A
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGF--------------ELDEYVNSALVDMYGKCDCLEVA 262
Query: 404 VSFVRKMPMEPDAVIWTSLL 423
+KMP V W S++
Sbjct: 263 REVFQKMP-RKSLVAWNSMI 281
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 273/499 (54%), Gaps = 13/499 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MP+ + WNAM +G+SL DV+ LF +M R N T+ + +
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+AGA+REG+ VH + GF + + T ++++Y+ + A +VF ++N V W+A
Sbjct: 217 RAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSA 276
Query: 124 MISAYISCGDVG-SGRRLLDLAPERDVVMWS-----IVISGYIESGDMVSARELFDKMPN 177
MI Y+ + +G + +V M + +++ G GD+ R +
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVK 336
Query: 178 R----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
D+ NT+++ YA G + + F E+ ++V S+N LI G N R ++
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRL 396
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +M G + P+ TL+ VL ACS L AL G H Y GY N + NAL+DMY
Sbjct: 397 FHEMRTSG-IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYT 455
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG ++ A VF+ + +RDI+SWNTM+ G +HG +ALSLF+ M+ + PD VT +
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLA 515
Query: 354 ILSACTHMGLVRDGFLYFQSMV-DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
ILSAC+H GLV +G F SM +++IP+I+HY CM DLL RAG LD+A FV KMP
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
EPD + +LL AC T+KN E+ + + L + + V+LSN Y RW+D AR+
Sbjct: 576 EPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARI 634
Query: 473 KIAMRDTGFRKLPGCSVIE 491
++ + G K PG S ++
Sbjct: 635 RMIQKKRGLLKTPGYSWVD 653
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 219/434 (50%), Gaps = 19/434 (4%)
Query: 4 ARKVFDKMPEP--NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
AR VFD++P P N W+ M Y+ + + L+ +M + P +T P V+++
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRP-TKYTYPFVLKA 112
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C+ A+ +G+ +H F + ++CTAL++ Y+ G + A KVF EMP+R++V W
Sbjct: 113 CAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAW 172
Query: 122 TAMISAY-ISC------GDVGSGRRLLDLAPERDVVMW---SIVISGYIESGDMVSAREL 171
AMIS + + C G RR+ L+P ++ ++ +G + G V
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
N D++ +L+ YA S + +VF+ ++N +W+ +IGGY N +A
Sbjct: 233 RMGFSN-DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAG 291
Query: 232 EAFKQMLVEGDV-VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
E F QMLV +V + + +L+ C+R G L G+ VH YA G+ ++ V N +I
Sbjct: 292 EVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIIS 351
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
YAK G + A F+ + +D+IS+N++I G ++ ++ LF +M+ S +PD T
Sbjct: 352 FYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITT 411
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDH-YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
+G+L+AC+H+ + G V H Y++ I + + D+ + G LD A
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDT 469
Query: 410 MPMEPDAVIWTSLL 423
M + D V W ++L
Sbjct: 470 MH-KRDIVSWNTML 482
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 158/310 (50%), Gaps = 28/310 (9%)
Query: 151 MWSIVISGYIESGDMVSARELFDKMPNRDV-MSWNTLLNG----YANSGDVGSFEKVFEE 205
M+ ++ I S ++V + + + R + +S +T+L YA+ +V VF+E
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 206 MPER--NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+P N +W+++I YA N AL+ + +ML G V P +T VL AC+ L A+
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG-VRPTKYTYPFVLKACAGLRAI 119
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
D GK +H + + +M+V AL+D YAKCG +E A+ VF+ + +RD+++WN MI+G
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 324 AMHGNTADALSLFDQMKN-SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
++H D + LF M+ P+ T VG+ A G +R+G ++
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG----------KAVHG 229
Query: 383 QIEHYGCMADLLGRAGLLD-----QAVSFVRK---MPMEPDAVIWTSLLGACRTHKNV-E 433
G DL+ + G+LD + + + R+ + + + V W++++G ++ + E
Sbjct: 230 YCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKE 289
Query: 434 IAELAFQHLI 443
E+ FQ L+
Sbjct: 290 AGEVFFQMLV 299
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 26/322 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM----NRAAAAPLNHFTLPIV 58
+AR+VFD + N TW+AM GY E ++ +F +M N A P+ + ++
Sbjct: 258 YARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPV---AIGLI 314
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ C++ G + G VHC A K GF + + +I Y+ GS+ DA++ F E+ ++V
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 119 VVWTAMIS-AYISCGDVGSGR-----RLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
+ + ++I+ ++C S R R + P+ ++ + ++ + S+ +
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGY 434
Query: 173 DKMPNRDVMS--WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ V + N L++ Y G + ++VF+ M +R++ SWN ++ G+ +G +A
Sbjct: 435 CVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEA 494
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV------ 284
L F M G V P++ TL+A+L ACS G +D GK + +G+ V
Sbjct: 495 LSLFNSMQETG-VNPDEVTLLAILSACSHSGLVDEGKQLFNSMS----RGDFNVIPRIDH 549
Query: 285 GNALIDMYAKCGVIESAVDVFN 306
N + D+ A+ G ++ A D N
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVN 571
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 268/543 (49%), Gaps = 75/543 (13%)
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYKVFGEM 113
L +++ C ++++G+ +H GFK N+ L LI MY G DA KVF +M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 114 -------------------------------PERNVVVWTAMISAYISCGDVGSG----- 137
PER+VV W M+ Y G++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 138 -----------------------RRLLDLAPE-----------RDVVMWSIVISGYIESG 163
R L L + +VV+ +I Y + G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
M SA+ FD+M +D+ W TL++GYA GD+ + EK+F EMPE+N SW LI GY R
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G + AL+ F++M+ G V P FT + L A + + +L GK +H Y + N
Sbjct: 289 QGSGNRALDLFRKMIALG-VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 284 VGNALIDMYAKCGVIESAVDVFN-CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
V ++LIDMY+K G +E++ VF C D+ D + WNTMI+ LA HG AL + D M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
R QP+ T V IL+AC+H GLV +G +F+SM + I+P EHY C+ DLLGRAG +
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
+ + +MP EPD IW ++LG CR H N E+ + A LI+L+P++ A +++LS+IY D
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD--ERHPETESIYRALRGLT 520
G+W+ V +L+ M+ K S IE V F D H E IY L L
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Query: 521 MLL 523
++
Sbjct: 588 AVI 590
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 48/369 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD MPE + +WN M GY+ + + + + E R+ N F+ ++ +C
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI-KFNEFSFAGLLTACV 190
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K+ ++ Q H GF N L ++I+ Y+ G + A + F EM +++ +WT
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-------- 175
+IS Y GD+ + +L PE++ V W+ +I+GY+ G A +LF KM
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 176 ---------------------------------PNRDVMSWNTLLNGYANSGDVGSFEKV 202
PN V+S +L++ Y+ SG + + E+V
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS--SLIDMYSKSGSLEASERV 368
Query: 203 FEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
F ++ + WN +I A++G AL M ++ V PN TLV +L ACS G
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRTTLVVILNACSHSG 427
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
++ G +W G + LID+ + G + + + D WN +
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 320 INGLAMHGN 328
+ +HGN
Sbjct: 488 LGVCRIHGN 496
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A K+F +MPE N +W A+ GY S + LF +M P FT +
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP-EQFTFSSCLC 319
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVV 119
+ + ++R G+++H + + N+ + ++LI+MYS GS+ + +VF ++ + V
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV 379
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
W MISA G R+LD DM+ F PNR
Sbjct: 380 FWNTMISALAQHGLGHKALRMLD---------------------DMIK----FRVQPNRT 414
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEM-------PERNVYSWNVLIGGYARNGRFSDALE 232
+ +LN ++SG V + FE M P++ Y+ LI R G F + +
Sbjct: 415 TLV--VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA--CLIDLLGRAGCFKELMR 470
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
++M E P+ A+L C G ++GK
Sbjct: 471 KIEEMPFE----PDKHIWNAILGVCRIHGNEELGK 501
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 297/555 (53%), Gaps = 28/555 (5%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G AR VFD M E + +WN++ G + + V LF ++ R P + +T+ V+++
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP-DQYTMTSVLKA 425
Query: 62 CSKAGAVREG----EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
A ++ EG +QVH A K +SF+ TALI+ YS + +A +F E +
Sbjct: 426 ---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFD 481
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPER-----DVVMWSIVIS-GY---IESGDMVSA 168
+V W AM++ Y D +L L ++ D + ++ + G+ I G V A
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 169 RELFDKMPNRDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ D+ W + +L+ Y GD+ + + F+ +P + +W +I G NG
Sbjct: 542 YAI---KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
A F QM + G V+P++FT+ + A S L AL+ G+ +H A + + FVG
Sbjct: 599 EERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+L+DMYAKCG I+ A +F ++ +I +WN M+ GLA HG + L LF QMK+ +P
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
D VTF+G+LSAC+H GLV + + + +SM Y I P+IEHY C+AD LGRAGL+ QA +
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+ M ME A ++ +LL ACR + E + L+ELEP + + +V+LSN+Y +W
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
++ + M+ +K PG S IE + + F D + +TE IYR ++ + ++
Sbjct: 838 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE 897
Query: 527 GYVP----NLVDVAQ 537
GYVP LVDV +
Sbjct: 898 GYVPETDFTLVDVEE 912
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 172/373 (46%), Gaps = 45/373 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYS-----LTESHRDVVVLFAEMNRAAAAPLNHFTL 55
+ +AR+VFDKMP+ + +WN++ Y+ + E+ + +LF + R + TL
Sbjct: 90 LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTL 148
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+++ C +G V E H A K G + F+ AL+ +Y
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY------------------ 190
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG------DMVSAR 169
+ G V G+ L + P RDVV+W++++ Y+E G D+ SA
Sbjct: 191 -------------LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 170 ELFDKMPNRDVMSWNTLLNGY-ANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
PN + ++G +++G V SF + + N + Y +G++S
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
L+ F M VE DV + T + +L ++ +L +G+ VH A +G + V N+L
Sbjct: 298 ALLKCFADM-VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
I+MY K A VF+ + RD+ISWN++I G+A +G +A+ LF Q+ +PD
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 349 VTFVGILSACTHM 361
T +L A + +
Sbjct: 417 YTMTSVLKAASSL 429
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Query: 121 WTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W + I+ D+ G+ R+L + + + +IS Y + G + AR +FDKMP
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+RD++SWN++L YA S E V E + + A F+
Sbjct: 102 DRDLVSWNSILAAYAQSS-----ECVVENIQQ---------------------AFLLFR- 134
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+L + V + TL +L C G + + H YA IG G+ FV AL+++Y K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
++ +F + RD++ WN M+ G +A+ L +S P+ +T
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 16/218 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+ FD +P P+ W M +G +F++M P + FT+ + +
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP-DEFTIATLAK 626
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S A+ +G Q+H A K + F+ T+L++MY+ GS+ DAY +F + N+
Sbjct: 627 ASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA 686
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFD 173
W AM+ + G G+ L L + D V + V+S SG + A +
Sbjct: 687 WNAML---VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMR 743
Query: 174 KMP-----NRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
M ++ ++ L + +G V E + E M
Sbjct: 744 SMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L +GK H + F+ N LI MY+KCG + A VF+ + RD++SWN+++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 323 LAMHG-----NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV--RDGFLYFQSMV 375
A N A LF ++ +T +L C H G V + F + +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 376 --DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
D + G + ++ + G + + +MP D V+W +L A
Sbjct: 175 GLDGDEFVA-----GALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 266/462 (57%), Gaps = 13/462 (2%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI-SCG---DVGSGRRL- 140
N FL TA+I Y+ +G +A ++G M + + + SA + +CG D+ GR+
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 141 ---LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
L V + + +I Y++ + AR++FD+MP RDV+SW L+ YA G++
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
++FE +P +++ +W ++ G+A+N + +ALE F +M G + ++ T+ + AC
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG-IRADEVTVAGYISAC 291
Query: 258 SRLGALDMGKWVHVYAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
++LGA A+ GY ++ +G+ALIDMY+KCG +E AV+VF ++ +++ +
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+++MI GLA HG +AL LF M E +P+ VTFVG L AC+H GLV G F SM
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+ + P +HY CM DLLGR G L +A+ ++ M +EP +W +LLGACR H N EI
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS-VIECN 493
AE+A +HL ELEP N+++LSN+Y G W V R++ +++ G +K P S V++ N
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 494 DSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
+ +F+ + HP + I L L L + GY P+L V
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSV 573
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 170/370 (45%), Gaps = 46/370 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR+V + + N W A+ GY++ + + ++ M + P++ FT ++++C
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVS-FTFSALLKAC 159
Query: 63 SKAGAVREGEQVHCVAAK-RGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ G Q H + RGF + ++ +I+MY S+ A KVF EMPER+V+ W
Sbjct: 160 GTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISW 218
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------ 175
T +I+AY G++ L + P +D+V W+ +++G+ ++ A E FD+M
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 176 -----------------------------------PNRDVMSWNTLLNGYANSGDVGSFE 200
P+ V+ + L++ Y+ G+V
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VF M +NV++++ +I G A +GR +AL F M+ + ++ PN T V L+ACS
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 398
Query: 261 GALDMGKWV-HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNT 318
G +D G+ V ++ G + ++D+ + G ++ A+++ + W
Sbjct: 399 GLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGA 458
Query: 319 MINGLAMHGN 328
++ +H N
Sbjct: 459 LLGACRIHNN 468
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+V E + RN + W +I GYA G+F +A+ + M E ++ P FT A+L AC +
Sbjct: 104 RVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKACGTM 162
Query: 261 GALDMGKWVHVYAESIGYKGNMF--VGNALIDMYAKC----------------------- 295
L++G+ H A++ +G F VGN +IDMY KC
Sbjct: 163 KDLNLGRQFH--AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 296 --------GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
G +E A ++F L +D+++W M+ G A + +AL FD+M+ S + D
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQ-SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
VT G +SAC +G + Q + YS + + D+ + G +++AV+
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI---ELEPKNPANFV 454
M + ++S++ TH + A F +++ E++P N FV
Sbjct: 341 FMSMN-NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP-NTVTFV 389
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 290/551 (52%), Gaps = 24/551 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+RKVF+ M + N ++WN++ + Y+ D + L EM P IV +
Sbjct: 143 SRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP------DIVTWNSL 196
Query: 64 KAGAVREGEQVHCVAAKR-----GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-- 116
+G +G +A + G K ++ ++L++ + G + + G +
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256
Query: 117 --NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+V V T +I YI G + R + D+ +++V W+ ++SG + + A L +
Sbjct: 257 WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR 316
Query: 175 MPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGR 226
M D ++WN+L +GYA G V +M E+ NV SW + G ++NG
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
F +AL+ F +M EG V PN T+ +L L L GK VH + + +V
Sbjct: 377 FRNALKVFIKMQEEG-VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL+DMY K G ++SA+++F + + + SWN M+ G AM G + ++ F M + +P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
D +TF +LS C + GLV++G+ YF M Y IIP IEH CM DLLGR+G LD+A F
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
++ M ++PDA IW + L +C+ H+++E+AE+A++ L LEP N AN++M+ N+Y +L RW
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
+DV R++ MR+ R S I+ + +V FY+ + HP+ IY L L ++
Sbjct: 616 EDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKS 675
Query: 527 GYVPNLVDVAQ 537
GYVP+ + Q
Sbjct: 676 GYVPDTSCIHQ 686
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ N D + + Y +G K+F+EMP+R+ +WN ++ R+G + A+E F
Sbjct: 18 LDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELF 77
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++M G D T+V +L CS G+ +H Y +G + N+ + N+LI MY++
Sbjct: 78 REMQFSG-AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSR 136
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G +E + VFN + R++ SWN++++ G DA+ L D+M+ +PD VT+ +
Sbjct: 137 NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL 196
Query: 355 LSACTHMGLVRDGFLYFQSM 374
LS GL +D + M
Sbjct: 197 LSGYASKGLSKDAIAVLKRM 216
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 168/419 (40%), Gaps = 110/419 (26%)
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP--- 176
V +A + Y C +G +L D P+RD + W+ ++ + SG+ A ELF +M
Sbjct: 25 VVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSG 84
Query: 177 ------------------------------------NRDVMSWNTLLNGYANSGDVGSFE 200
+V N+L+ Y+ +G +
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 201 KVFEEMPERNVYS-----------------------------------WNVLIGGYARNG 225
KVF M +RN+ S WN L+ GYA G
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
DA+ K+M + G + P+ ++ ++L A + G L +GK +H Y +++V
Sbjct: 205 LSKDAIAVLKRMQIAG-LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE 263
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
LIDMY K G + A VF+ +D ++I++WN++++GL+ DA +L +M+ +
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
PD +T + S+ Y+ + + E D++G+
Sbjct: 324 PDAIT--------------------WNSLASGYATLGKPEK---ALDVIGK--------- 351
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+++ + P+ V WT++ C + N A F + E E P N +S + K LG
Sbjct: 352 -MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGP-NAATMSTLLKILG 407
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 284/540 (52%), Gaps = 11/540 (2%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F+++PE ++ T+N + GY + + + LF +M ++ P + FT V+++
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP-SDFTFSGVLKAVVGLH 264
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
G+Q+H ++ GF ++ + +++ YS V + +F EMPE + V + +IS
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 127 AYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK----MPNR 178
+Y + R + + +R ++ ++S + R+L + +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+ N+L++ YA E +F+ +P+R SW LI GY + G L+ F +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
++ + T VL A + +L +GK +H + G N+F G+ L+DMYAKCG I
Sbjct: 445 -GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ AV VF + R+ +SWN +I+ A +G+ A+ F +M S QPD V+ +G+L+AC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H G V G YFQ+M Y I P+ +HY CM DLLGR G +A + +MP EPD ++
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEP-KNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
W+S+L ACR HKN +AE A + L +E ++ A +V +SNIY G W+ V +K AMR
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
+ G +K+P S +E N + F S D+ HP + I R + LT + GY P+ V Q
Sbjct: 684 ERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQ 743
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 207/457 (45%), Gaps = 16/457 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIVVRSC 62
AR +FD MP+ TW + Y+ + LF +M R+++ L +H T ++ C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTA--LIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ A QVH A K GF N FL + L++ Y + A +F E+PE++ V
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 121 WTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----F 172
+ +I+ Y G + ++ + +S V+ + D ++L
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+RD N +L+ Y+ V +F+EMPE + S+NV+I Y++ ++ +L
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M G +F +L + L +L MG+ +H A + VGN+L+DMY
Sbjct: 338 FFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKC + E A +F L +R +SW +I+G G L LF +M+ S + D TF
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L A + G + + + + + D+ + G + AV +MP
Sbjct: 457 TVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP- 514
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEP 447
+ +AV W +L+ A + + E A AF +IE L+P
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
R++ + D + ++ + G + +AR+++D+MP+++ +S NT+++G+ +GDV S
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD-VVPNDFTLVAVLLAC 257
+F+ MP+R V +W +L+G YARN F +A + F+QM +P+ T +L C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMF--VGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
+ + VH +A +G+ N F V N L+ Y + ++ A +F + +D ++
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+NT+I G G +++ LF +M+ S QP TF G+L A
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 50/390 (12%)
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRR 139
K GF ++ ++E +G V A KV+ EMP +N V MIS ++ GDV S R
Sbjct: 41 KTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARD 100
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR------DVMSWNTLLNGYANS 193
L D P+R VV W+I++ Y + A +LF +M D +++ TLL G ++
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 194 ------GDVGSFE-------------------------------KVFEEMPERNVYSWNV 216
G V +F +FEE+PE++ ++N
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
LI GY ++G +++++ F +M G P+DFT VL A L +G+ +H + +
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G+ + VGN ++D Y+K + +F+ + D +S+N +I+ + +L F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSMVDHYSIIPQIEHYG-CMADLL 394
+M+ F +LS ++ ++ G L+ Q+++ + I H G + D+
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL---ATADSILHVGNSLVDMY 396
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+ + ++A + +P + V WT+L+
Sbjct: 397 AKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 173/377 (45%), Gaps = 17/377 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
R +FD+MPE + ++N + + YS + + + F EM + +F ++ +
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAA 362
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+++ G Q+HC A + +L++MY+ +A +F +P+R V WTA
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTA 422
Query: 124 MISAYISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
+IS Y+ G G+G +L D ++ V+ ++ ++L +
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+V S + L++ YA G + +VFEEMP+RN SWN LI +A NG A+ AF
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M +E + P+ +++ VL ACS G ++ G ++ + G ++D+ +
Sbjct: 543 KM-IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 295 CGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTA----DALSLFDQMKNSREQPDGV 349
G A + + + D I W++++N +H N + A LF M+ R+ V
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF-SMEKLRDAAAYV 660
Query: 350 TFVGILSACTHMGLVRD 366
+ I +A VRD
Sbjct: 661 SMSNIYAAAGEWEKVRD 677
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF++MP+ N +WNA+ + ++ + FA+M + P + ++ V+ +CS
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP-DSVSILGVLTACS 564
Query: 64 KAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVW 121
G V +G E ++ G ++++ G +A K+ EMP E + ++W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
+++++A C + + L + A E+ LF RD
Sbjct: 625 SSVLNA---C-RIHKNQSLAERAAEK-----------------------LFSMEKLRDAA 657
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNV-----YSW 214
++ ++ N YA +G+ V + M ER + YSW
Sbjct: 658 AYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 289/527 (54%), Gaps = 12/527 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+ ++F+K+ + N +W AM + Y+ E + F+EM ++ P N TL V+ SC
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP-NLVTLYSVLSSCG 314
Query: 64 KAGAVREGEQVHCVAAKRGFKWN-SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G +REG+ VH A +R N L AL+E+Y+ G + D V + +RN+V W
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 123 AMISAYISCGDV----GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
++IS Y G V G R+++ + D + IS +G + +++ +
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 179 DV---MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
DV N+L++ Y+ SG V S VF ++ R+V +WN ++ G+++NG +A+ F
Sbjct: 435 DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD 494
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M + N+ T +AV+ ACS +G+L+ GKWVH G K ++F ALIDMYAKC
Sbjct: 495 YMY-HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKC 552
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + +A VF + R I+SW++MIN MHG A+S F+QM S +P+ V F+ +L
Sbjct: 553 GDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVL 612
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC H G V +G YF +++ + + P EH+ C DLL R+G L +A +++MP D
Sbjct: 613 SACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLAD 671
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A +W SL+ CR H+ ++I + L ++ + + +LSNIY + G W++ RL+ A
Sbjct: 672 ASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSA 731
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
M+ + +K+PG S IE + V F + +E +T+ IYR L L L
Sbjct: 732 MKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNL 778
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 249/537 (46%), Gaps = 34/537 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A KVFD MP + W+ + + + +F M P + T+ VV
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP-DAVTMISVVE 210
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C++ G +R VH ++ F + LC +L+ MYS G + + ++F ++ ++N V
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 121 WTAMISAY----ISCGDVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMV---SA 168
WTAMIS+Y S + S ++ E ++V V+S G I G V +
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R D PN + +S L+ YA G + E V + +RN+ +WN LI YA G
Sbjct: 331 RRELD--PNYESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
AL F+QM+ + + P+ FTL + + AC G + +GK +H + + FV N+L
Sbjct: 388 QALGLFRQMVTQ-RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSL 445
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMY+K G ++SA VFN + R +++WN+M+ G + +GN+ +A+SLFD M +S + +
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY---GCMADLLGRAGLLDQAVS 405
VTF+ ++ AC+ +G + G V H II ++ + D+ + G L+ A +
Sbjct: 506 VTFLAVIQACSSIGSLEKG-----KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAET 560
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
R M +S++ A H + A F ++E K N V+ N+ G
Sbjct: 561 VFRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTK--PNEVVFMNVLSACGH 617
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
V K F + V ++ F L R + + YR ++ + L
Sbjct: 618 SGSVEEGKYY-----FNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 187/412 (45%), Gaps = 20/412 (4%)
Query: 60 RSCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
RSCS ++R Q+H G + + T LIE Y+ GS + VF P +
Sbjct: 9 RSCS---SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 119 VVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISG------YIESGDMVSA 168
++ +I + C + + RL+ + ++ V+ ++ G V
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R + + D + +LL Y +G++ EKVF+ MP R++ +W+ L+ NG
Sbjct: 126 R-IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
AL FK M+ +G V P+ T+++V+ C+ LG L + + VH + + + N+L
Sbjct: 185 KALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+ MY+KCG + S+ +F + +++ +SW MI+ + AL F +M S +P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG-CMADLLGRAGLLDQAVSFV 407
VT +LS+C +GL+R+G + P E + +L G L + +
Sbjct: 304 VTLYSVLSSCGLIGLIREG-KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
R + + + V W SL+ + H+ + I L + + P F + S+I
Sbjct: 363 RVVS-DRNIVAWNSLI-SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 22/296 (7%)
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
RD + L+ YA G S VFE P + + + VLI A++ + ++
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 238 LVEGDVVPNDFTLVAVLLACS-RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+ E + + F +VL AC+ L +G VH G + + +L+ MY + G
Sbjct: 92 VSETTQI-SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ A VF+ + RD+++W+T+++ +G AL +F M + +PD VT + ++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 357 ACTHMGLVRDGFLYFQSM------VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
C +G +R + +D + Y DLL + ++
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA------ 264
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLG 464
+ +AV WT+++ + + E A +F +I+ +EP N V L ++ G
Sbjct: 265 --KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP----NLVTLYSVLSSCG 314
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 304 bits (779), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 287/537 (53%), Gaps = 26/537 (4%)
Query: 18 TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV 77
TWN + + E + + EM P + FT+ V+ +CS +R G+++H
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEP-DEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 78 AAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
A K G NSF+ +AL++MY V +VF M +R + +W AMI+ Y S +
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY-SQNEHDK 386
Query: 137 GRRLLDLAPER------DVVMWSIVISGYIESGDMVSARE-----LFDKMPNRDVMSWNT 185
LL + E + + V+ + SG S +E + + +RD NT
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF-SRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM------LV 239
L++ Y+ G + ++F +M +R++ +WN +I GY + DAL +M +
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 240 EG----DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+G + PN TL+ +L +C+ L AL GK +H YA ++ VG+AL+DMYAKC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ + VF+ + ++++I+WN +I MHGN +A+ L M +P+ VTF+ +
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+AC+H G+V +G F M Y + P +HY C+ DLLGRAG + +A + MP + +
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 416 -AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
A W+SLLGA R H N+EI E+A Q+LI+LEP +++V+L+NIY G W ++
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
M++ G RK PGCS IE D V +F + D HP++E + L L +R GYVP+
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 25/347 (7%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R+VFD M + WNAM GYS E ++ ++LF M +A N T+ VV +C +
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+GA E +H KRG + F+ L++MYS G + A ++FG+M +R++V W M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 125 ISAYISCG-----------------DVGSGRRLLDLAPERDVVMW---SIVISGYIESGD 164
I+ Y+ V G + L P +M S + G
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ A + + + DV + L++ YA G + KVF+++P++NV +WNV+I Y +
Sbjct: 538 EIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMF 283
G +A++ + M+V+G V PN+ T ++V ACS G +D G + +V G + +
Sbjct: 597 GNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDR--RDIISWNTMINGLAMHGN 328
++D+ + G I+ A + N + R +W++++ +H N
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 203/453 (44%), Gaps = 27/453 (5%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G KVFD++ E N +WN++ + E + F M P + FTL VV +
Sbjct: 150 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP-SSFTLVSVVTA 208
Query: 62 CSK---AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
CS + G+QVH ++G + NSF+ L+ MY G + + + G R++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 119 VVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISG-----YIESGDMVSAR 169
V W ++S+ + R ++ E D S V+ + +G + A
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L + + + + L++ Y N V S +VF+ M +R + WN +I GY++N +
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL F M ++ N T+ V+ AC R GA + +H + G + FV N L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE----- 344
DMY++ G I+ A+ +F ++ RD+++WNTMI G + DAL L +M+N
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 345 ------QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
+P+ +T + IL +C + + G + + ++ + + D+ + G
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCG 566
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
L + ++P + + + W ++ A H N
Sbjct: 567 CLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
NTL+N Y GD G+ KVF+ + ERN SWN LI ++ ALEAF+ ML E +V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-NV 195
Query: 244 VPNDFTLVAVLLACSRLG---ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
P+ FTLV+V+ ACS L L MGK VH Y G + N F+ N L+ MY K G + S
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLAS 254
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
+ + RD+++WNT+++ L + +AL +M +PD T +L AC+H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 361 MGLVRDG 367
+ ++R G
Sbjct: 315 LEMLRTG 321
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-----------NRAAAAPLNH 52
A ++F KM + + TWN M GY +E H D ++L +M +R + P N
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP-NS 517
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
TL ++ SC+ A+ +G+++H A K + + +AL++MY+ G + + KVF +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDL 143
+P++NV+ W +I AY G G+G+ +DL
Sbjct: 578 IPQKNVITWNVIIMAY---GMHGNGQEAIDL 605
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 20/245 (8%)
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
W L+ R+ +A+ + M+V G + P+++ A+L A + L +++GK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 274 ESIGYK-GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
GY ++ V N L+++Y KCG + VF+ + R+ +SWN++I+ L A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTH--------MGLVRDGFLYFQSMVDHYSIIPQI 384
L F M + +P T V +++AC++ MG + + ++ + I +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA-CRTHKNVEIAELAFQHLI 443
YG + L LL SF + D V W ++L + C+ + +E E + ++
Sbjct: 244 AMYGKLGKLASSKVLLG---SFGGR-----DLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 444 E-LEP 447
E +EP
Sbjct: 296 EGVEP 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+RKVFD++P+ N TWN + Y + + ++ + L M P N T V +CS
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP-NEVTFISVFAACS 629
Query: 64 KAGAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVV 120
+G V EG ++ + + G + +S ++++ G + +AY++ MP
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689
Query: 121 WTAMISAY-----ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
W++++ A + G++ + + L+ L P V S Y+ ++ S+ L+DK
Sbjct: 690 WSSLLGASRIHNNLEIGEI-AAQNLIQLEPN--------VASHYVLLANIYSSAGLWDK 739
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 288/532 (54%), Gaps = 11/532 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +ARKVFD++P+ + +N+M YS ++ +V+ L+ +M P + T + ++
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP-DSSTFTMTIK 124
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + +GE V C A G+K + F+C++++ +Y G + +A +FG+M +R+V+
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVIC 184
Query: 121 WTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE----LF 172
WT M++ + G V R + + RD V+ ++ + GD R L+
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+V+ +L++ YA G + +VF M + SW LI G+A+NG + A E
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
A +M G P+ TLV VL+ACS++G+L G+ VH Y + + AL+DMY
Sbjct: 305 AVVEMQSLG-FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDMY 362
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG + S+ ++F + R+D++ WNTMI+ +HGN + +SLF +M S +PD TF
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+LSA +H GLV G +F M++ Y I P +HY C+ DLL RAG +++A+ + +
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+ IW +LL C H+N+ + ++A +++L P + ++SN + +W++VA++
Sbjct: 483 DNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKV 542
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
+ MR+ K+PG S IE N + F D H E + + LR L +R
Sbjct: 543 RKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 199/444 (44%), Gaps = 46/444 (10%)
Query: 69 REGEQVHCVAAKRGFKWN-SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
R Q+H G N S + LI G + A KVF E+P+R V V+ +MI
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 128 YISCGDVGSGRRLLD------LAPERDVVMWSI--VISGYI-ESGDMVSARELFDKMPNR 178
Y + RL D + P+ +I +SG + E G+ V + + D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKN 149
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
DV +++LN Y G + E +F +M +R+V W ++ G+A+ G+ A+E +++M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
EG + ++ +L A LG MG+ VH Y G N+ V +L+DMYAK G I
Sbjct: 210 NEG-FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E A VF+ + + +SW ++I+G A +G A +M++ QPD VT VG+L AC
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Query: 359 THMGLVRDGFLYF--------------QSMVDHYSIIPQI-------EHYG--------C 389
+ +G ++ G L +++D YS + EH G
Sbjct: 329 SQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 390 MADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
M G G + VS KM +EPD + SLL A VE + F +I
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 447 PKNPA--NFVMLSNIYKDLGRWQD 468
P+ ++V L ++ GR ++
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEE 472
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 287/601 (47%), Gaps = 79/601 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR+VFD MPE +T WN M YS H++ + LF ++ + A P + ++ ++
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP-DDYSFTAILS 78
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG--------- 111
+C+ G V+ G ++ + + GF + + +LI+MY A KVF
Sbjct: 79 TCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNE 138
Query: 112 ------------------------EMPERNVVVWTAMISAYISCGDVGSG----RRLLDL 143
EMP+R W MIS + CG + S + +L+
Sbjct: 139 VTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLES 198
Query: 144 APERDVVMWSIVI------SGYIESGDMVSAREL-----------------FDKMPNRD- 179
+ D +S ++ S + G MV A L + K+ +RD
Sbjct: 199 EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDD 258
Query: 180 ------------VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+SWN++++ G+ +VF PE+N+ +W +I GY RNG
Sbjct: 259 AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
AL F +M+ G V + F AVL ACS L L GK +H G++G +VGNA
Sbjct: 319 EQALRFFVEMMKSG-VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNA 377
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+++YAKCG I+ A F + +D++SWNTM+ +HG AL L+D M S +PD
Sbjct: 378 LVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPD 437
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL----DQA 403
VTF+G+L+ C+H GLV +G + F+SMV Y I +++H CM D+ GR G L D A
Sbjct: 438 NVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLA 497
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
++ + + W +LLGAC TH + E+ + L EP +FV+LSN+Y
Sbjct: 498 TTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCST 557
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
GRW++ ++ M + G +K PGCS IE + V F D HP E + L L +
Sbjct: 558 GRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Query: 524 R 524
R
Sbjct: 618 R 618
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 50/329 (15%)
Query: 191 ANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTL 250
A SG + S +VF+ MPE + +WN ++ Y+R G +A+ F Q+ D P+D++
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS-DAKPDDYSF 73
Query: 251 VAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG-------------- 296
A+L C+ LG + G+ + G+ ++ V N+LIDMY KC
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 297 -------------------VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
E+A+DVF + +R +WN MI+G A G LSLF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 338 QMKNSREQPDGVTFVGILSACT--HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
+M S +PD TF +++AC+ +V ++ + + +S +E +
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS--SAVEAKNSVLSFYT 251
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC----RTHKNVEIAELAFQHLIELEPKNPA 451
+ G D A+ + + + V W S++ AC T K +E+ LA + KN
Sbjct: 252 KLGSRDDAMRELESIEVLTQ-VSWNSIIDACMKIGETEKALEVFHLAPE-------KNIV 303
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+ + Y G + R + M +G
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 171/464 (36%), Gaps = 138/464 (29%)
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF----- 172
+V T+ I++ G + S R++ D PE D V W+ +++ Y G A LF
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 173 -DKMPN--------------------RDVMSW-------------NTLLNGYANSGDVGS 198
D P+ R + S N+L++ Y D S
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 199 FEKVFE---------------------------------EMPERNVYSWNVLIGGYARNG 225
KVF EMP+R ++WN++I G+A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA-LDMGKWVHVYAESIGYKGNMFV 284
+ L FK+ML E + P+ +T +++ ACS + + G+ VH G+ +
Sbjct: 184 KLESCLSLFKEML-ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 285 GNALIDMYAKCGV-------------------------------IESAVDVFNCLDRRDI 313
N+++ Y K G E A++VF+ ++I
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI 302
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY--- 370
++W TMI G +G+ AL F +M S D + +L AC+ + L+ G +
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 371 -----FQ-------SMVDHYSIIPQIEH---------------YGCMADLLGRAGLLDQA 403
FQ ++V+ Y+ I+ + M G GL DQA
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 404 VSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ M ++PD V + LL C VE + F+ +++
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
I AK G I SA VF+ + D ++WNTM+ + G +A++LF Q++ S +PD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+F ILS C +G V+ G QS+V + + D+ G+ A R
Sbjct: 71 YSFTAILSTCASLGNVKFG-RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 409 KMPMEP-DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
M + + V W SLL A + N E E A +E+ + + ++ + + G+ +
Sbjct: 130 DMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 468 DVARLKIAMRDTGFRKLPGC 487
L M ++ F+ P C
Sbjct: 187 SCLSLFKEMLESEFK--PDC 204
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 295/532 (55%), Gaps = 13/532 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++ +M + TWN++ GY +++ + F++M AA + ++ ++
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI-AAGHKSDEVSMTSIIA 394
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ + + G ++H K G+ N + LI+MYS + F M +++++
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 121 WTAMISAYIS--CGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDK 174
WT +I+ Y C V + D+A +R ++++ SI+ + + M+ +E+
Sbjct: 455 WTTVIAGYAQNDC-HVEALELFRDVAKKRMEIDEMILGSILRASSVLKS-MLIVKEIHCH 512
Query: 175 MPNR---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ + D + N L++ Y ++G +VFE + ++V SW +I A NG S+A+
Sbjct: 513 ILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAV 572
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
E F++M VE + + L+ +L A + L AL+ G+ +H Y G+ + A++DM
Sbjct: 573 ELFRRM-VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YA CG ++SA VF+ ++R+ ++ + +MIN MHG A+ LFD+M++ PD ++F
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISF 691
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +L AC+H GL+ +G + + M Y + P EHY C+ D+LGRA + +A FV+ M
Sbjct: 692 LALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
EP A +W +LL ACR+H EI E+A Q L+ELEPKNP N V++SN++ + GRW DV +
Sbjct: 752 TEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEK 811
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
++ M+ +G K PGCS IE + V +F + D+ HPE++ IY L +T L
Sbjct: 812 VRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 212/467 (45%), Gaps = 47/467 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MP+ WN M Y + L+ M R PL + P ++++C+
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACA 193
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVVVWT 122
K +R G ++H + K G+ F+ AL+ MY+ + A ++F E+ + V+W
Sbjct: 194 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVM-------WSIVIS-------GYIESGDMVSA 168
+++S+Y + SG+ L L R++ M ++IV + Y + G + A
Sbjct: 254 SILSSYST-----SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
L + ++ N L+ Y G + E++ +M +V +WN LI GY +N +
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ALE F M+ G ++ ++ +++ A RL L G +H Y G+ N+ VGN L
Sbjct: 369 EALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMY+KC + F + +D+ISW T+I G A + +AL LF + R + D
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 487
Query: 349 VTFVGILSACT-----------HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+ IL A + H ++R G L + Q E + D+ G+
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLL---------DTVIQNE----LVDVYGKC 534
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ A + + D V WTS++ + + N A F+ ++E
Sbjct: 535 RNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 183/381 (48%), Gaps = 29/381 (7%)
Query: 10 KMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVR 69
++P P A ++ + LTE+ + + V +E N +P+ F V+ C K AV
Sbjct: 51 QVPSPKLACFDGV-----LTEAFQRLDV--SENN----SPVEAFAY--VLELCGKRRAVS 97
Query: 70 EGEQVHCVAAKR--GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+G Q+H K F+ + FL L+ MY GS+ DA KVF EMP+R W MI A
Sbjct: 98 QGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 128 YISCGDVGSGRRL-----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
Y+S G+ S L ++ P + + ++ + D+ S EL + S
Sbjct: 157 YVSNGEPASALALYWNMRVEGVP-LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHS 215
Query: 183 W----NTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQM 237
N L++ YA + D+ + ++F+ E+ + WN ++ Y+ +G+ + LE F++M
Sbjct: 216 TGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCG 296
+ G PN +T+V+ L AC +GK +H +S + ++V NALI MY +CG
Sbjct: 276 HMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ A + ++ D+++WN++I G + +AL F M + + D V+ I++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 357 ACTHMGLVRDGFLYFQSMVDH 377
A + + G ++ H
Sbjct: 395 ASGRLSNLLAGMELHAYVIKH 415
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 19/243 (7%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF- 248
Y G + EKVF+EMP+R ++WN +IG Y NG + AL + M VEG VP
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG--VPLGLS 183
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
+ A+L AC++L + G +H +GY F+ NAL+ MYAK + +A +F+
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 309 DRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ D + WN++++ + G + + L LF +M + P+ T V L+AC DG
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC-------DG 296
Query: 368 FLYFQSMVD-HYSIIPQIEH----YGCMA--DLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
F Y + + H S++ H Y C A + R G + QA +R+M D V W
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWN 355
Query: 421 SLL 423
SL+
Sbjct: 356 SLI 358
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 286/553 (51%), Gaps = 51/553 (9%)
Query: 12 PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREG 71
P PN +N M + +++ S + L++ M R +P + T ++++ S V+
Sbjct: 96 PNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSP-DRQTFLYLMKASSFLSEVK-- 150
Query: 72 EQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAY-- 128
Q+HC G ++L +L++ Y G+ G A KVF MP +V + MI Y
Sbjct: 151 -QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 129 ------------------------------ISCG---DVGSGRRLLDLAPER------DV 149
+ CG D+ G+ + R ++
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER 209
++ + ++ Y + + A+ FD M +D+ SWNT++ G+ GD+ + + VF++MP+R
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 210 NVYSWNVLIGGYARNGRFSDAL-EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
++ SWN L+ GY++ G + E F +M + V P+ T+V+++ + G L G+W
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
VH + KG+ F+ +ALIDMY KCG+IE A VF +D+ W +MI GLA HGN
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
AL LF +M+ P+ VT + +L+AC+H GLV +G F M D + P+ EHYG
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 389 CMADLLGRAGLLDQAVSFV-RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+ DLL RAG +++A V +KMPM P +W S+L ACR +++E AELA L++LEP
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER-H 506
+ +V+LSNIY +GRW + + AM + G +K G S + + + F + +++ H
Sbjct: 570 EKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNH 629
Query: 507 PETESIYRALRGL 519
P I R L+ L
Sbjct: 630 PRWTEIKRILQHL 642
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 168/351 (47%), Gaps = 54/351 (15%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G A KVF +MP P+ +++N M GY+ + + L+ +M P + L ++V
Sbjct: 183 GVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV-C 241
Query: 62 CSKAGAVREGEQVHCVAAKRG--FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
C +R G+ VH +RG + N L AL++MY G A + F M ++++
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG-DMVSARELFDKM--- 175
W M+ ++ GD+ + + + D P+RD+V W+ ++ GY + G D + RELF +M
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 176 ----PNRDVMSWNTLLNGYANSGDV--------------------------------GSF 199
P+R M +L++G AN+G++ G
Sbjct: 362 EKVKPDRVTMV--SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 200 EK---VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
E+ VF+ E++V W +I G A +G AL+ F +M EG V PN+ TL+AVL A
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG-VTPNNVTLLAVLTA 478
Query: 257 CSRLGALDMGKWVHVY---AESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
CS G ++ G +HV+ + G+ +L+D+ + G +E A D+
Sbjct: 479 CSHSGLVEEG--LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTE-SHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M A+ VFD+MP+ + +WN++ GYS R V LF EM + T+ ++
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ G + G VH + + K ++FL +ALI+MY G + A+ VF E++V
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVA 435
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKM 175
+WT+MI+ G+ +L E V V V++ SG + +F+ M
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
Query: 176 PNR-----DVMSWNTLLNGYANSGDVGSFEKVFE-EMPER 209
++ + + +L++ +G V + + + +MP R
Sbjct: 496 KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 267/534 (50%), Gaps = 77/534 (14%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+F EPN ++N M G + T H + L+ M + P + FT V +C+K
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP-DKFTYNFVFIACAKL 145
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G VH K G ER+V + ++I
Sbjct: 146 EEIGVGRSVHSSLFKVGL-------------------------------ERDVHINHSLI 174
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-------R 178
Y CG VG R+L D ERD V W+ +ISGY E+G A +LF KM R
Sbjct: 175 MMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDER 234
Query: 179 DVMSW--------------------------------NTLLNGYANSGDVGSFEKVFEEM 206
++S + L++ Y GD+ S +VF +M
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+++ +W +I Y++NG+ S+A + F +M G V P+ TL VL AC +GAL++G
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG-VSPDAGTLSTVLSACGSVGALELG 353
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K + +A + + N++V L+DMY KCG +E A+ VF + ++ +WN MI A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G+ +AL LFD+M P +TF+G+LSAC H GLV G YF M + ++P+IEH
Sbjct: 414 GHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL- 445
Y + DLL RAG+LD+A F+ + P +PD ++ ++LGAC K+V I E A + L+E+
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
E KN N+V+ SN+ D+ W + A+++ MRD G K PGCS IE ++EF
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 584
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+ARK+FD++ E +T +WN+M +GYS +D + LF +M P + TL ++
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP-DERTLVSMLG 241
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS G +R G + +A + ++FL + LI MY G + A +VF +M +++ V
Sbjct: 242 ACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVA 301
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
WTAMI+ Y G +L + V + +S + + V A EL ++
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
++ L++ Y G V +VFE MP +N +WN +I YA G +AL
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALL 421
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
F +M V P+D T + VL AC G + G ++ H + G + +ID+
Sbjct: 422 LFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDL 477
Query: 292 YAKCGVIESA 301
++ G+++ A
Sbjct: 478 LSRAGMLDEA 487
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 5/274 (1%)
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN-GRF 227
R++ +M V N L+ GD +F E N YS+N +I G
Sbjct: 54 RQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDH 113
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
AL +++M G + P+ FT V +AC++L + +G+ VH +G + ++ + ++
Sbjct: 114 EAALSLYRRMKFSG-LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LI MYAKCG + A +F+ + RD +SWN+MI+G + G DA+ LF +M+ +PD
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
T V +L AC+H+G +R G L + M I + + G+ G LD A
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRL-LEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 408 RKMPMEPDAVIWTSLLGA-CRTHKNVEIAELAFQ 440
+M ++ D V WT+++ + K+ E +L F+
Sbjct: 292 NQM-IKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 266/458 (58%), Gaps = 10/458 (2%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEM------PERNVVVWTAMISAYISCGDVG--SG 137
N F+ LI +S A+ + +M P+ + S+ + C VG +
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 138 RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
+++ + DV + + ++ Y G + +A +F +M RDV+SW +++ GY G V
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVE 200
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+ ++F+EMP RN+++W+++I GYA+N F A++ F+ M EG VV N+ +V+V+ +C
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG-VVANETVMVSVISSC 259
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
+ LGAL+ G+ + Y N+ +G AL+DM+ +CG IE A+ VF L D +SW+
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
++I GLA+HG+ A+ F QM + P VTF +LSAC+H GLV G +++M
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAEL 437
+ I P++EHYGC+ D+LGRAG L +A +F+ KM ++P+A I +LLGAC+ +KN E+AE
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 438 AFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVV 497
LI+++P++ +V+LSNIY G+W + L+ M++ +K PG S+IE + +
Sbjct: 440 VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKIN 499
Query: 498 EF-YSLDERHPETESIYRALRGLTMLLRLHGYVPNLVD 534
+F D++HPE I R + +RL GY N D
Sbjct: 500 KFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 41/305 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+A +F ++ PN +N + +S + +M ++ P N T P +++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN-ITFPFLIK 125
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S+ V GEQ H + GF+ + ++ +L+ MY+ G + A ++FG+M R+VV
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WT+M++ Y CG V + R + D P R++ WSI+I+GY ++ A +LF+ M V
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 181 MSWNT---------------------------------------LLNGYANSGDVGSFEK 201
++ T L++ + GD+
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VFE +PE + SW+ +I G A +G A+ F QM+ G +P D T AVL ACS G
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG-FIPRDVTFTAVLSACSHGG 364
Query: 262 ALDMG 266
++ G
Sbjct: 365 LVEKG 369
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 262/515 (50%), Gaps = 12/515 (2%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAA-APLNHFTLPIVVRSCSK 64
KVF MPE NT TW+ M +GY+ + + +F R + + V+ S +
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
V G Q+HC+ K G L AL+ MYS S+ +A K+F +RN + W+AM
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------YIESGDMVSARELFDKM 175
++ Y G+ +L + I G Y+E G + + L
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF-LLKLG 352
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
R + + L++ YA +G + K F+ + ER+V W LI GY +N +AL ++
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M G ++PND T+ +VL ACS L L++GK VH + G+ + +G+AL MY+KC
Sbjct: 413 RMKTAG-IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G +E VF +D++SWN MI+GL+ +G +AL LF++M +PD VTFV I+
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC+H G V G+ YF M D + P+++HY CM DLL RAG L +A F+ ++
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W LL AC+ H E+ A + L+ L + + +V LS IY LGR +DV R+
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETE 510
MR G K GCS IE + F D HP E
Sbjct: 652 MRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 228/498 (45%), Gaps = 53/498 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLT---ESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
+ A +F+ + + +WN++ GYS S V+ LF EM P N +TL
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILP-NAYTLAG 123
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+ ++ S + G Q H + K + ++ T+L+ MY G V D KVF MPERN
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDL-------APERD----VVMWSIVISGYIESGDMV 166
W+ M+S Y + G V ++ +L + D V+ S+ + Y+ G +
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ + + +S N L+ Y+ + K+F+ +RN +W+ ++ GY++NG
Sbjct: 244 HCITIKNGLLGFVALS-NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+A++ F +M G + P+++T+V VL ACS + L+ GK +H + +G++ ++F
Sbjct: 303 SLEAVKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL+DMYAK G + A F+CL RD+ W ++I+G + + +AL L+ +MK + P
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDH---------------YSIIPQIE------ 385
+ T +L AC+ + + G + H YS +E
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 386 ---------HYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVE 433
+ M L G D+A+ +M MEPD V + +++ AC VE
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 434 IAELAFQHL---IELEPK 448
F + I L+PK
Sbjct: 542 RGWFYFNMMSDQIGLDPK 559
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA---LEAFKQMLVE 240
N L+N YA G + +F + ++V SWN LI GY++NG S + ++ F++M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
D++PN +TL + A S L + +G+ H + G+++V +L+ MY K G++E
Sbjct: 113 -DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV-----GIL 355
+ VF + R+ +W+TM++G A G +A+ +F+ +E+ +V L
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL 231
Query: 356 SACTHMGLVRD 366
+A ++GL R
Sbjct: 232 AATIYVGLGRQ 242
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 267/507 (52%), Gaps = 14/507 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD M + +WN M +GY D +++F M + L+H T+ ++ C
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV-DLDHATIVSMLPVCG 229
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G VH + ++ + AL+ MY G + +A VF M R+V+ WT
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE-SGDMVSARE-------LFDKM 175
MI+ Y GDV + L L V ++ I+ + GD + + +
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D++ +L++ YA V +VF + + W+ +I G +N SDAL FK
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M E DV PN TL ++L A + L L +H Y G+ ++ L+ +Y+KC
Sbjct: 410 RMRRE-DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 296 GVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
G +ESA +FN + + D++ W +I+G MHG+ +AL +F +M S P+ +TF
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITF 528
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
L+AC+H GLV +G F+ M++HY + + HY C+ DLLGRAG LD+A + + +P
Sbjct: 529 TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
EP + +W +LL AC TH+NV++ E+A L ELEP+N N+V+L+NIY LGRW+D+ +
Sbjct: 589 FEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEK 648
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVE 498
++ M + G RK PG S IE + V+
Sbjct: 649 VRSMMENVGLRKKPGHSTIEIRSNSVD 675
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 196/447 (43%), Gaps = 32/447 (7%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
LNHF +S SK A+ HC G + + + + L Y+ G + A K+
Sbjct: 22 LNHFA---ATQSISKTKAL------HCHVITGG-RVSGHILSTLSVTYALCGHITYARKL 71
Query: 110 FGEMPERNVVVWTAMISAYISCGDVGSGRRL--------LDLAPERDVVMWSIVISGYIE 161
F EMP+ +++ + +I Y+ G + + P+ + +G ++
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 162 S---GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
S G +V R + RD N LL Y N G V VF+ M R+V SWN +I
Sbjct: 132 SMKLGLVVHGR-ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
GY RNG +DAL F M+ E V + T+V++L C L L+MG+ VH E
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNE-SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V NAL++MY KCG ++ A VF+ ++RRD+I+W MING G+ +AL L
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH--YSIIPQIEHYGCMADLLGR 396
M+ +P+ VT ++S C V DG V YS I M R
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI--ELEPKNPANFV 454
L + S K P W++++ C ++ V A F+ + ++EP N A
Sbjct: 370 VDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEP-NIATLN 424
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGF 481
L Y L + + + TGF
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGF 451
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 200/484 (41%), Gaps = 76/484 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVVRS 61
+ARK+F++MP+ + ++N + Y + D + +F M + + +T P V ++
Sbjct: 67 YARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA 126
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ +++ G VH + F + ++ AL+ MY G V A VF M R+V+ W
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISW 186
Query: 122 TAMISAYIS--------------------------------CG---DVGSGRRLLDLAPE 146
MIS Y CG D+ GR + L E
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 147 R----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ + + + +++ Y++ G M AR +FD+M RDV++W ++NGY GDV
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV------ 300
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
+ALE + M EG V PN T+ +++ C
Sbjct: 301 -------------------------ENALELCRLMQFEG-VRPNAVTIASLVSVCGDALK 334
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
++ GK +H +A ++ + +LI MYAKC ++ VF+ + W+ +I G
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
+ +DAL LF +M+ +P+ T +L A + +R + + +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA-MNIHCYLTKTGFMS 453
Query: 383 QIEHYGCMADLLGRAGLLDQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
++ + + + G L+ A +++ D V+W +L+ H + A F
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Query: 440 QHLI 443
++
Sbjct: 514 MEMV 517
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 14/278 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR VFD+M + TW M NGY+ + + L M P N T+ +V
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP-NAVTIASLVS 327
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C A V +G+ +H A ++ + + T+LI MY+ V ++VF + +
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 121 WTAMISAYIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W+A+I+ + +G +R+ E ++ + ++ Y D+ A + +
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 177 NRDVMS----WNTLLNGYANSGDVGSFEKVF----EEMPERNVYSWNVLIGGYARNGRFS 228
MS L++ Y+ G + S K+F E+ ++V W LI GY +G
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+AL+ F +M+ G V PN+ T + L ACS G ++ G
Sbjct: 508 NALQVFMEMVRSG-VTPNEITFTSALNACSHSGLVEEG 544
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 280/571 (49%), Gaps = 58/571 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VF+++P P+ + + M GY+ + D + LF EM N ++ C
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNS-----MISGCV 108
Query: 64 KAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G + ++ +R W TA++ G V A ++F +MP ++ W
Sbjct: 109 ECGDMNTAVKLFDEMPERSVVSW-----TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN 163
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
+M+ Y+ G V +L P ++V+ W+ +I G ++ A +LF M + S
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 183 WN---------------------------------------TLLNGYANSGDVGSFEKVF 203
+ +L+ YAN +G KVF
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF 283
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+E V W L+ GY+ N + DAL F ML ++PN T + L +CS LG L
Sbjct: 284 DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTL 342
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
D GK +H A +G + + FVGN+L+ MY+ G + AV VF + ++ I+SWN++I G
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG---FLYFQSMVDHYSI 380
A HG A +F QM ++PD +TF G+LSAC+H G + G F Y S ++H I
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH--I 460
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
+I+HY CM D+LGR G L +A + +M ++P+ ++W +LL ACR H +V+ E A
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
+ L+ K+ A +V+LSNIY GRW +V++L++ M+ G K PG S + EF+
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 501 SLDERHPETESIYRALRGLTMLLRLHGYVPN 531
S D+ P IY L L L+ GY P+
Sbjct: 581 SGDQ--PHCSRIYEKLEFLREKLKELGYAPD 609
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 174/378 (46%), Gaps = 33/378 (8%)
Query: 103 VGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES 162
+ +A +VF ++P +V ++T MI+ Y + L D P RDVV W+ +ISG +E
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
GDM +A +LFD+MP R V+SW ++NG SG V E++F +MP ++ +WN ++ GY
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 223 RNGRFSDALEAFKQM------------------------------LVEGDVVPNDFTLVA 252
+ G+ DAL+ FKQM ++ +
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
V+ AC+ A MG VH +G+ +V +LI YA C I + VF+
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+ W +++G +++ DALS+F M + P+ TF L++C+ +G + D
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL-DWGKEMH 349
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
+ + + + +G ++ AVS K+ + V W S++ C H
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG 408
Query: 433 EIAELAFQHLIELEPKNP 450
+ A + F +I L K P
Sbjct: 409 KWAFVIFGQMIRLN-KEP 425
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 38/273 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G +RKVFD+ A W A+ +GYSL + H D + +F+ M R + P N T +
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP-NQSTFASGLN 334
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SCS G + G+++H VA K G + ++F+ +L+ MYS G+V DA VF ++ ++++V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W ++I + C G G+ W+ VI G M+ +K P D
Sbjct: 395 WNSII---VGCAQHGRGK-------------WAFVI-----FGQMIR----LNKEP--DE 427
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMP------ERNVYSWNVLIGGYARNGRFSDALEAF 234
+++ LL+ ++ G + K+F M +R + + ++ R G+ +A E
Sbjct: 428 ITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
++M+V+ PN+ +A+L AC +D G+
Sbjct: 488 ERMVVK----PNEMVWLALLSACRMHSDVDRGE 516
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 39/304 (12%)
Query: 154 IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
++I ++ S + ARE+F+++P+ V + ++ GY S + +F+EMP R+V S
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN +I G G + A++ F +M E VV + A++ C R G +D A
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEM-PERSVV----SWTAMVNGCFRSGKVDQ-------A 147
Query: 274 ESIGYK---GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
E + Y+ + N+++ Y + G ++ A+ +F + +++ISW TMI GL + +
Sbjct: 148 ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACT-----HMG------LVRDGFLYFQSMVDHYS 379
+AL LF M + F +++AC HMG +++ GFLY + Y
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLY-----EEYV 262
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I Y + + D+ V +WT+LL +K E A F
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEKV--------HEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 440 QHLI 443
++
Sbjct: 315 SGML 318
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 226/388 (58%), Gaps = 7/388 (1%)
Query: 153 SIVISGYIESGDMVSARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
S + I+SGD++ ++ K+ + D + TL++ Y+ + KVF+E+P+
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQML--VEGDVVPNDFTLVAVLLACSRLGALDMG 266
R+ SWNVL Y RN R D L F +M V+G V P+ T + L AC+ LGALD G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K VH + + G G + + N L+ MY++CG ++ A VF + R+++SW +I+GLAM+
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD-HYSIIPQIE 385
G +A+ F++M P+ T G+LSAC+H GLV +G ++F M + I P +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
HYGC+ DLLGRA LLD+A S ++ M M+PD+ IW +LLGACR H +VE+ E HLIEL
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
+ + ++V+L N Y +G+W+ V L+ M++ PGCS IE +V EF D
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 506 HPETESIYRALRGLTMLLRLHGYVPNLV 533
HP E IY+ L + L++ GYV +
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYVAEIT 504
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ +VF + P + N M +SL+++ + LF + R ++ P N + ++
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C K+G + G Q+H GF +S L T L+++YS + DA KVF E+P+R+ V
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 121 WTAMISAYI---SCGDV----GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
W + S Y+ DV + +D + D V + + G + +++ D
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 174 KMPNRDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ + NTL++ Y+ G + +VF M ERNV SW LI G A NG +
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK--WVHVYAESIGYKGNMFVGNA 287
A+EAF +ML G + P + TL +L ACS G + G + + + K N+
Sbjct: 302 AIEAFNEMLKFG-ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
++D+ + +++ A + ++ + D W T++ +HG+
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 5/234 (2%)
Query: 195 DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
D+ +VF + + N +I ++ + + F+ + + N + L
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
C + G L G +H S G+ + + L+D+Y+ C A VF+ + +RD +
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSRE---QPDGVTFVGILSACTHMGLVRDGFLYF 371
SWN + + + T D L LFD+MKN + +PDGVT + L AC ++G + G
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG-KQV 239
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+D + + + + R G +D+A M E + V WT+L+
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGM-RERNVVSWTALISG 292
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 274/532 (51%), Gaps = 14/532 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+F+ MP N +W + +GY H++ + LF M++ P + + ++ SC+
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP-DMYACSSILTSCA 361
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ G QVH K +S++ +LI+MY+ + DA KVF +VV++ A
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 124 MISAYISCG---------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE--LF 172
MI Y G ++ R + P + + S + S + +F
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
N D+ + + L++ Y+N + VF+EM +++ WN + GY + +AL
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F ++ + + P++FT ++ A L ++ +G+ H G + N ++ NAL+DMY
Sbjct: 542 LFLELQLSRER-PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG E A F+ RD++ WN++I+ A HG AL + ++M + +P+ +TFV
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFV 660
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+LSAC+H GLV DG F+ M+ + I P+ EHY CM LLGRAG L++A + KMP
Sbjct: 661 GVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT 719
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+P A++W SLL C NVE+AE A + I +PK+ +F MLSNIY G W + ++
Sbjct: 720 KPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKV 779
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
+ M+ G K PG S I N V F S D+ H + IY L L + +R
Sbjct: 780 RERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 220/474 (46%), Gaps = 31/474 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +ARKVF+KMPE N +W+ M + + + + +V+F E R N + L ++
Sbjct: 95 MVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQ 154
Query: 61 SCSKAGAVREGE----QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
+CS G G Q+ K GF + ++ T LI+ Y G++ A VF +PE+
Sbjct: 155 ACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV----MWSIVISG-----YIESGDMVS 167
+ V WT MIS + G +L E +VV + S V+S ++E G +
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
A L + D N L++ Y G V + K+F MP +N+ SW L+ GY +N
Sbjct: 273 AHILRYGL-EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH 331
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+A+E F M G + P+ + ++L +C+ L AL G VH Y + +V N+
Sbjct: 332 KEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT---ADALSLFDQMKNSRE 344
LIDMYAKC + A VF+ D++ +N MI G + G +AL++F M+
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 345 QPDGVTFVGILSAC---THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
+P +TFV +L A T +GL + ++ Y + I + D+ L
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQ----IHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 402 QAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPANFV 454
+ +M ++ D VIW S+ G + +N E L + ++L + P F
Sbjct: 507 DSRLVFDEMKVK-DLVIWNSMFAGYVQQSENEEALNLFLE--LQLSRERPDEFT 557
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 177/407 (43%), Gaps = 75/407 (18%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR VFD +PE +T TW M +G + LF ++ P + + L V+ +C
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP-DGYILSTVLSAC 259
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S + G+Q+H + G + ++ L LI+
Sbjct: 260 SILPFLEGGKQIHAHILRYGLEMDASLMNVLID--------------------------- 292
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN----- 177
+Y+ CG V + +L + P ++++ W+ ++SGY ++ A ELF M
Sbjct: 293 ----SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 178 ----------------------------------RDVMSWNTLLNGYANSGDVGSFEKVF 203
D N+L++ YA + KVF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 204 EEMPERNVYSWNVLIGGYARNG---RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+ +V +N +I GY+R G +AL F+ M + P+ T V++L A + L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL-IRPSLLTFVSLLRASASL 467
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
+L + K +H G ++F G+ALID+Y+ C ++ + VF+ + +D++ WN+M
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
G +AL+LF +++ SRE+PD TF +++A ++ V+ G
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 19/295 (6%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
RLL L D++ + V+ G I +V EL D N L+N Y+ +G +
Sbjct: 49 RLLQLRASDDLLHYQNVVHGQI----IVWGLEL-------DTYLSNILINLYSRAGGMVY 97
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
KVFE+MPERN+ SW+ ++ +G + ++L F + PN++ L + + ACS
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 259 RLGALDMGKWVHVYAESI----GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
L G+W+ +S G+ +++VG LID Y K G I+ A VF+ L + +
Sbjct: 158 GLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV 215
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+W TMI+G G + +L LF Q+ PDG +LSAC+ + + G +
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG-KQIHAH 274
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ Y + + D + G + A MP + + WT+LL + +
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQN 328
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 289/543 (53%), Gaps = 24/543 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FD++P+P+T ++N + +GY+ +VLF M R ++ FTL ++ +C
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM-RKLGFEVDGFTLSGLIAAC- 150
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVVWT 122
V +Q+HC + GF S + A + YS G + +A VF M E R+ V W
Sbjct: 151 -CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 123 AMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFDKM 175
+MI AY G G + L L E D+ + V++ ++ R+ K+
Sbjct: 210 SMIVAY---GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 176 P----NRDVMSWNTLLNGYANSGDVGSF---EKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+++ + L++ Y+ G EKVF+E+ ++ WN +I GY+ N S
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 229 D-ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN-MFVGN 286
+ A+++F+QM G P+D + V V ACS L + K +H A N + V N
Sbjct: 327 EEAVKSFRQMQRIGHR-PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
ALI +Y K G ++ A VF+ + + +S+N MI G A HG+ +AL L+ +M +S P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ +TFV +LSAC H G V +G YF +M + + I P+ EHY CM DLLGRAG L++A F
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+ MP +P +V W +LLGACR HKN+ +AE A L+ ++P +VML+N+Y D +W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKW 565
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
+++A ++ +MR RK PGCS IE F + D HP + L + ++
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKV 625
Query: 527 GYV 529
GYV
Sbjct: 626 GYV 628
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 48/466 (10%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G+ +H + K +++L + +YS G + A F E NV + ++ AY
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR------------ 178
+ R+L D P+ D V ++ +ISGY ++ + +A LF +M
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 179 --------DVMSW-----------------NTLLNGYANSGDVGSFEKVFEEMPE-RNVY 212
D++ N + Y+ G + VF M E R+
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
SWN +I Y ++ + AL +K+M+ +G + + FTL +VL A + L L G+ H
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKI-DMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVD---VFNCLDRRDIISWNTMINGLAMHGN- 328
G+ N VG+ LID Y+KCG + D VF + D++ WNTMI+G +M+
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
+ +A+ F QM+ +PD +FV + SAC+++ + + +I
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LE 446
+ L ++G L A +MP E +AV + ++ H + A L +Q +++ +
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 447 PKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIEC 492
P N FV + + G+ + M++T F+ P C
Sbjct: 445 P-NKITFVAVLSACAHCGKVDEGQEYFNTMKET-FKIEPEAEHYSC 488
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 13/271 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTES-HRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M + KVF ++ P+ WN M +GYS+ E + V F +M R P + + V
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP-DDCSFVCVT 352
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+CS + + +Q+H +A K N + ALI +Y G++ DA VF MPE N
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 119 VVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
V + MI Y G +R+LD + + + V+S G + +E F+
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFS 228
M + ++ +++ +G + E+ + MP + +W L+G ++ +
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMA 532
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
A A +++V + + ++A + A +R
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADAR 563
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 269/512 (52%), Gaps = 42/512 (8%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C++ + + +H K G L L+ +Y G+ A +VF EMP R+ + W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 122 TAMISAY---------------------------------ISCGDVGS---GRRL----L 141
++++A +C ++GS GR++ +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 142 DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
D V+ S ++ Y + G + SA+ +FD + ++ +SW +++GYA SG +
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F +P +N+YSW LI G+ ++G+ +A F +M E + + L +++ AC+ L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
A G+ VH ++G+ +F+ NALIDMYAKC + +A D+F+ + RD++SW ++I
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
G+A HG AL+L+D M + +P+ VTFVG++ AC+H+G V G FQSM Y I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P ++HY C+ DLLGR+GLLD+A + + MP PD W +LL AC+ ++ H
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 442 LI-ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
L+ + K+P+ +++LSNIY W V+ + + + RK PG S +E FY
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFY 492
Query: 501 SLDERHPETESIYRALRGLTMLLRL-HGYVPN 531
+ + HP E I+R L+ L +R+ +GYVP+
Sbjct: 493 AGETSHPLKEDIFRLLKKLEEEMRIRNGYVPD 524
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 176/392 (44%), Gaps = 43/392 (10%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA +VFD+MP + W ++ + + +F+ + ++ + F +V++C
Sbjct: 56 HALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKAC 115
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G++ G QVHC + + + ++L++MY+ G + A VF + +N + WT
Sbjct: 116 ANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWT 175
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD--- 179
AM+S Y G L + P +++ W+ +ISG+++SG + A +F +M
Sbjct: 176 AMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDI 235
Query: 180 -------------------------------------VMSWNTLLNGYANSGDVGSFEKV 202
V N L++ YA DV + + +
Sbjct: 236 LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDI 295
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F M R+V SW LI G A++G+ AL + M+ G V PN+ T V ++ ACS +G
Sbjct: 296 FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHVGF 354
Query: 263 LDMGKWV-HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMI 320
++ G+ + + G + ++ L+D+ + G+++ A ++ + + D +W ++
Sbjct: 355 VEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALL 414
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+ G + + D + +S + D T++
Sbjct: 415 SACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
L C+R L K +H + +G + N L+++Y KCG A+ VF+ + RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGF-LYF 371
I+W +++ L + LS+F + +S +PD F ++ AC ++G + G ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHK 430
+V Y+ ++ + D+ + GLL+ A + + ++ + + WT+++ G ++ +
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 431 NVEIAEL 437
E EL
Sbjct: 187 KEEALEL 193
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 276/561 (49%), Gaps = 47/561 (8%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
WN + Y+ E +V+ + M P + FT P V+++C + V G VH
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRP-DAFTYPSVLKACGETLDVAFGRVVHGSI 170
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
+K + ++C ALI MY ++G A ++F M ER+ V W A+I+ Y S G
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 139 RLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKMPN----------------- 177
L D E V+ W+I+ G +++G+ V A L +M N
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 178 ---------RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+++ NTL+ Y+ D+ VF + E ++ +WN
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-E 274
+I GYA+ + +A ++MLV G PN TL ++L C+R+ L GK H Y
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+K + N+L+D+YAK G I +A V + + +RD +++ ++I+G G AL+
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
LF +M S +PD VT V +LSAC+H LV +G F M Y I P ++H+ CM DL
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
GRAG L +A + MP +P W +LL AC H N +I + A + L+E++P+NP +V
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+++N+Y G W +A ++ MRD G +K PGC+ I+ + F D PE + Y
Sbjct: 590 LIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYP 649
Query: 515 ALRGLTMLLRLH-GYVPNLVD 534
L GL L++ + GY N V
Sbjct: 650 LLDGLNQLMKDNAGYAINKVQ 670
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 164/374 (43%), Gaps = 46/374 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM------------------ 42
MG AR++FD+M E + +WNA+ N Y+ + LF +M
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 43 ----------------NRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWN 86
R L+ + I +++CS GA+R G+++H +A +
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 87 SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG----RRLLD 142
+ LI MYS + A VF + E ++ W ++IS Y R +L
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD-----VMSWNTLLNGYANSGDVG 197
+ + + + ++ ++ +E + R M WN+L++ YA SG +
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+ ++V + M +R+ ++ LI GY G AL FK+M G + P+ T+VAVL AC
Sbjct: 435 AAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG-IKPDHVTVVAVLSAC 493
Query: 258 SRLGALDMGKWVHVYAE-SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI-IS 315
S + G+ + + + G + + + ++D+Y + G + A D+ + + + +
Sbjct: 494 SHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGAT 553
Query: 316 WNTMINGLAMHGNT 329
W T++N +HGNT
Sbjct: 554 WATLLNACHIHGNT 567
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA VF + E + TWN++ +GY+ + L EM A P N TL ++ C
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP-NSITLASILPLC 391
Query: 63 SKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
++ ++ G++ HC +R FK + L +L+++Y+ G + A +V M +R+ V +
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTY 451
Query: 122 TAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFDK 174
T++I Y G+ G G L L E D V V+S S + LF K
Sbjct: 452 TSLIDGY---GNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMK 508
Query: 175 MPNRD-----VMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFS 228
M + ++ +++ Y +G + + + MP + + +W L+ +G
Sbjct: 509 MQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQ 568
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
A +++L P + L+A + A +
Sbjct: 569 IGKWAAEKLLEMKPENPGYYVLIANMYAAA 598
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 274/539 (50%), Gaps = 81/539 (15%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR VF+ + P+ WN+M GYS + + ++ + EM R +P ++FT P V++
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSP-DYFTFPYVLK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS ++ G VH K GF+ N ++ T L+ MY
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMY----------------------- 152
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN--- 177
+ CG+V G R+ + P+ +VV W +ISG++ + A E F +M +
Sbjct: 153 --------MCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204
Query: 178 -----------------RDVMS--W-------------------------NTLLNGYANS 193
+D+++ W +L++ YA
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
GD+ + +F+ MPER + SWN +I GY++NG +AL F ML G + P+ T ++V
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG-IAPDKVTFLSV 323
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
+ A G +G+ +H Y G+ + + AL++MYAK G ESA F L+++D
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNS-REQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
I+W +I GLA HG+ +ALS+F +M+ PDG+T++G+L AC+H+GLV +G YF
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA 443
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
M D + + P +EHYGCM D+L RAG ++A V+ MP++P+ IW +LL C H+N+
Sbjct: 444 EMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENL 503
Query: 433 EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
E+ + + E E +V+LSNIY GRW DV ++ +M+ K+ G S +E
Sbjct: 504 ELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 268/481 (55%), Gaps = 15/481 (3%)
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYS---AKGSVGDAYKVFGEMPERNVV 119
SK ++RE Q+ A K + SF+ LI + + S+ A +F M E ++V
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP--- 176
++ +M Y + L E ++ + +++ + A E ++
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ +V TL+N Y DV S VF+ + E V +N +I GYAR R ++AL
Sbjct: 156 MKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEAL 215
Query: 232 EAFKQMLVEGDVV-PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
F++M +G + PN+ TL++VL +C+ LG+LD+GKW+H YA+ + + V ALID
Sbjct: 216 SLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
M+AKCG ++ AV +F + +D +W+ MI A HG ++ +F++M++ QPD +T
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F+G+L+AC+H G V +G YF MV + I+P I+HYG M DLL RAG L+ A F+ K+
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P+ P ++W LL AC +H N+++AE + + EL+ + ++V+LSN+Y +W+ V
Sbjct: 394 PISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
L+ M+D K+PGCS IE N+ V EF+S D T ++RAL + L+L GYVP
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVP 513
Query: 531 N 531
+
Sbjct: 514 D 514
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 164/345 (47%), Gaps = 26/345 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +AR +F+ M EP+ +N+M GYS + +V LF E+ P N +T P +++
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDN-YTFPSLLK 137
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A A+ EG Q+HC++ K G N ++C LI MY+ V A VF + E VV
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDV---VMWSIVISGYIESGDMV---SA 168
+ AMI+ Y L L P V+ S + G ++ G + +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ F K V L++ +A G + +FE+M ++ +W+ +I YA +G+
Sbjct: 258 KHSFCKY----VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNA 287
++ F++M E +V P++ T + +L ACS G ++ G K+ G ++ +
Sbjct: 314 KSMLMFERMRSE-NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGN 328
++D+ ++ G +E D + +D+ I + W ++ + H N
Sbjct: 373 MVDLLSRAGNLE---DAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD++ EP +NAM GY+ + + LF EM P N TL V+ SC+
Sbjct: 183 ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP-NEITLLSVLSSCA 241
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G++ G+ +H A K F + TALI+M++ GS+ DA +F +M ++ W+A
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
MI AY + G E+ ++M+ + S ++ D +++
Sbjct: 302 MIVAYANHGKA-----------EKSMLMFERMRSENVQP----------------DEITF 334
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFKQML 238
LLN +++G V K F +M + ++ + ++ +R G DA E ++
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL- 393
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
+ P +L ACS LD+ + V
Sbjct: 394 ---PISPTPMLWRILLAACSSHNNLDLAEKV 421
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 276/516 (53%), Gaps = 37/516 (7%)
Query: 45 AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNS---FLCTALIEMYSAKG 101
A+ A +H + + +CS ++ Q+H + + FL ++++ S+
Sbjct: 41 ASTAGNHHQRIFSLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFS 97
Query: 102 SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG-------RRLLDL---APERDVVM 151
V A++VF + + +W +I A DV R++L+ +P++
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRA--CAHDVSRKEEAFMLYRKMLERGESSPDKHTFP 155
Query: 152 WSIVISGYI---ESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
+ + YI G V ++ DV N L++ Y + G + KVF+EMPE
Sbjct: 156 FVLKACAYIFGFSEGKQVHC-QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE 214
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
R++ SWN +I R G + AL+ F++M + P+ +T+ +VL AC+ LG+L +G W
Sbjct: 215 RSLVSWNSMIDALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 269 VHVY---AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
H + + ++ V N+LI+MY KCG + A VF + +RD+ SWN MI G A
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 326 HGNTADALSLFDQMKNSRE--QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
HG +A++ FD+M + RE +P+ VTFVG+L AC H G V G YF MV Y I P
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA-CRTHKNVEIAELAFQHL 442
+EHYGC+ DL+ RAG + +A+ V MPM+PDAVIW SLL A C+ +VE++E +++
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI 452
Query: 443 IELEPKNPAN-------FVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
I + N ++ +V+LS +Y RW DV ++ M + G RK PGCS IE N
Sbjct: 453 IGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGI 512
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
EF++ D HP+T+ IY+ L+ + LR GY+P+
Sbjct: 513 SHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPD 548
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 175/346 (50%), Gaps = 16/346 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRD-VVVLFAEM-NRAAAAPLNHFTLPIV 58
+ +A +VFD + ++ WN + + S ++ +L+ +M R ++P H T P V
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKH-TFPFV 157
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+++C+ EG+QVHC K GF + ++ LI +Y + G + A KVF EMPER++
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 119 VVWTAMISAYISCGDVGSGRRL---LDLAPERDVVMWSIVIS-----GYIESGDMVSARE 170
V W +MI A + G+ S +L + + E D V+S G + G A
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 171 L--FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
L D DV+ N+L+ Y G + E+VF+ M +R++ SWN +I G+A +GR
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 229 DALEAFKQMLVEGD-VVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGN 286
+A+ F +M+ + + V PN T V +L+AC+ G ++ G+ + + + +
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTAD 331
++D+ A+ G I A+D+ + + D + W ++++ G + +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 281/548 (51%), Gaps = 17/548 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A+ +F N +WN M G+S ++H VL + + T+ V
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C + +++HC + K+ F +N + A + Y+ GS+ A +VF + + V W
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDV---VMWSIVISGYIESGDMVSARELFDKMP-- 176
A+I + D R LD + + + S + + + + + L ++
Sbjct: 465 NALIGGHAQSND---PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 177 ------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
RD+ + ++L+ Y + G++ + + +F+ M ++++ SWN +I GY +NG A
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L F+QM++ G + +++ V ACS L +L +G+ H YA + + F+ +LID
Sbjct: 582 LGVFRQMVLYG-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 640
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MYAK G I + VFN L + SWN MI G +HG +A+ LF++M+ + PD +T
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLT 700
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV-RK 409
F+G+L+AC H GL+ +G Y M + + P ++HY C+ D+LGRAG LD+A+ V +
Sbjct: 701 FLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
M E D IW SLL +CR H+N+E+ E L ELEP+ P N+V+LSN+Y LG+W+DV
Sbjct: 761 MSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDV 820
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+++ M + RK GCS IE N V F + E I L M + GY
Sbjct: 821 RKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYR 880
Query: 530 PNLVDVAQ 537
P+ + V
Sbjct: 881 PDTMSVQH 888
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 15/378 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R VFD + N WNA+ + YS E + +V+ F EM +HFT P V+++C+
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V G VH + K G + F+ AL+ Y G V DA ++F MPERN+V W +
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 124 MISAYISCGDVGSGRRLL--------DLAPERDVVMWSIVI-----SGYIESGDMVSARE 170
MI + G LL D A DV V+ I G V
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ ++ V++ N L++ Y+ G + + + +F+ +NV SWN ++GG++ G
Sbjct: 319 VKLRLDKELVLN-NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT 377
Query: 231 LEAFKQMLVEG-DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
+ +QML G DV ++ T++ + C L K +H Y+ + N V NA +
Sbjct: 378 FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
YAKCG + A VF+ + + + SWN +I G A + +L QMK S PD
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 350 TFVGILSACTHMGLVRDG 367
T +LSAC+ + +R G
Sbjct: 498 TVCSLLSACSKLKSLRLG 515
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 186/378 (49%), Gaps = 16/378 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM---NRAAAAPLNHFTLPIVVR 60
A ++FD MPE N +WN+M +S + +L EM N A + TL V+
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C++ + G+ VH A K L AL++MYS G + +A +F +NVV
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 121 WTAMISAYISCGDVGSGRRLLD--LAPERDVVMWSIVI---------SGYIESGDMVSAR 169
W M+ + + GD +L LA DV + I ++ S +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L + ++++ N + YA G + ++VF + + V SWN LIGG+A++
Sbjct: 421 SLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
+L+A QM + G ++P+ FT+ ++L ACS+L +L +GK VH + + ++FV +++
Sbjct: 480 SLDAHLQMKISG-LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+Y CG + + +F+ ++ + ++SWNT+I G +G AL +F QM Q G+
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 350 TFVGILSACTHMGLVRDG 367
+ + + AC+ + +R G
Sbjct: 599 SMMPVFGACSLLPSLRLG 616
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 29/328 (8%)
Query: 55 LPIVVRSCSKAGAVREGEQVH-CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
L +++++ K + G ++H V+ + + LCT +I MY+ GS D+ VF +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIV---------------ISG 158
+N+ W A+IS+Y S L D E + M S +G
Sbjct: 147 RSKNLFQWNAVISSY-------SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 159 YIESGDMVSARELFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
+ G ++ L K DV N L++ Y G V ++F+ MPERN+ SWN +
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 218 IGGYARNGRFSDALEAFKQMLVE---GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
I ++ NG ++ +M+ E G +P+ TLV VL C+R + +GK VH +A
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ + + NAL+DMY+KCG I +A +F + ++++SWNTM+ G + G+T
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 335 LFDQMKNSRE--QPDGVTFVGILSACTH 360
+ QM E + D VT + + C H
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A++VF + +WNA+ G++ + R + +M + P + FT+ ++
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP-DSFTVCSLLS 504
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CSK ++R G++VH GF ++L ER++ V
Sbjct: 505 ACSKLKSLRLGKEVH------GFIIRNWL-------------------------ERDLFV 533
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
+ +++S YI CG++ + + L D ++ +V W+ VI+GY+++G A +F +M
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 176 -----------------PN-----------------RDVMSWNTLLNGYANSGDVGSFEK 201
P+ D +L++ YA +G + K
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF + E++ SWN +I GY +G +A++ F++M G P+D T + VL AC+ G
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSG 712
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF--NCLDRRDIISWNT 318
+ G +++ S G K N+ +IDM + G ++ A+ V + D+ W +
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 772
Query: 319 MINGLAMHGN 328
+++ +H N
Sbjct: 773 LLSSCRIHQN 782
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%)
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
++ N DV+ ++ YA G VF+ + +N++ WN +I Y+RN + + LE
Sbjct: 115 RLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLET 173
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +M+ D++P+ FT V+ AC+ + + +G VH G ++FVGNAL+ Y
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ----PDGV 349
G + A+ +F+ + R+++SWN+MI + +G + ++ L +M PD
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY----GCMADLLGRAGLLDQAVS 405
T V +L C R+ + V +++ +++ + D+ + G + A
Sbjct: 294 TLVTVLPVCA-----REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-Q 347
Query: 406 FVRKMPMEPDAVIWTSLLGA 425
+ KM + V W +++G
Sbjct: 348 MIFKMNNNKNVVSWNTMVGG 367
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 269/505 (53%), Gaps = 20/505 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M R+VFD + +W +M +GY + H + +F EM + N FTL V+
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM-VSFGLDANEFTLSSAVK 171
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS+ G VR G H V GF+WN F+ + L +Y DA +VF EMPE +V+
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC 231
Query: 121 WTAMISAYI-------SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
WTA++SA+ + G + R L P+ + G + + +E+
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR--LKQGKEIHG 289
Query: 174 KMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
K+ +V+ ++LL+ Y G V +VF M ++N SW+ L+GGY +NG
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+E F++M E D+ + VL AC+ L A+ +GK +H G GN+ V +ALI
Sbjct: 350 AIEIFREM-EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALI 404
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
D+Y K G I+SA V++ + R++I+WN M++ LA +G +A+S F+ M +PD +
Sbjct: 405 DLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYI 464
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
+F+ IL+AC H G+V +G YF M Y I P EHY CM DLLGRAGL ++A + + +
Sbjct: 465 SFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER 524
Query: 410 MPMEPDAVIWTSLLGACRTHKNV-EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
DA +W LLG C + + +AE + ++ELEPK ++V+LSN+YK +GR D
Sbjct: 525 AECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGD 584
Query: 469 VARLKIAMRDTGFRKLPGCSVIECN 493
++ M G K G S I+ +
Sbjct: 585 ALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 180/406 (44%), Gaps = 35/406 (8%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG-SVGDAYKVFGEMPER 116
++++C+K + G Q H K G + + + +L+ +Y G + + +VF +
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 117 NVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
+ + WT+M+S Y++ + ++ + + S + E G++ R F
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR-CF 185
Query: 173 DKMPNRDVMSWN-----TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ WN TL Y + + +VF+EMPE +V W ++ +++N +
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+AL F M +VP+ T VL AC L L GK +H + G N+ V ++
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+DMY KCG + A VFN + +++ +SW+ ++ G +G A+ +F +M E+ D
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKD 361
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC---------MADLLGRAG 398
F +L AC + VR G I Q GC + DL G++G
Sbjct: 362 LYCFGTVLKACAGLAAVRLG----------KEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+D A KM + + + W ++L A + E A F +++
Sbjct: 412 CIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 244 VPNDFTLVAVLL-ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV-IESA 301
+P L A LL C+++ + G H + G + + VGN+L+ +Y K G +
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
VF+ +D ISW +M++G AL +F +M + + T + AC+ +
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHY--GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
G VR G + ++ H + H+ +A L G A +MP EPD + W
Sbjct: 177 GEVRLGRCFHGVVITHGF---EWNHFISSTLAYLYGVNREPVDARRVFDEMP-EPDVICW 232
Query: 420 TSLLGA 425
T++L A
Sbjct: 233 TAVLSA 238
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 287/546 (52%), Gaps = 23/546 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD MPE N +W+A+ +G+ L + + LF+EM R P N FT +++C
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP-NEFTFSTNLKACG 118
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ +G Q+H K GF+ + +L++MYS G + +A KVF + +R+++ W A
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 124 MISAYISCGDVGSGRRLLD---------LAPERDVVMWSIVISGYIESGDMVSARELFDK 174
MI+ ++ G G + LD + D + ++ +G + + +++
Sbjct: 179 MIAGFV---HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 175 M-------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ P+ ++ +L++ Y G + S K F+++ E+ + SW+ LI GYA+ G F
Sbjct: 236 LVRSGFHCPSSATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+A+ FK+ L E + + F L +++ + L GK + A + V N+
Sbjct: 295 VEAMGLFKR-LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
++DMY KCG+++ A F + +D+ISW +I G HG ++ +F +M +PD
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
V ++ +LSAC+H G++++G F +++ + I P++EHY C+ DLLGRAG L +A +
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 473
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MP++P+ IW +LL CR H ++E+ + + L+ ++ KNPAN+VM+SN+Y G W
Sbjct: 474 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWN 533
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH- 526
+ + G +K G S +E V F S ++ HP T I L+ LR
Sbjct: 534 EQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREEL 593
Query: 527 GYVPNL 532
GYV L
Sbjct: 594 GYVYGL 599
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 215/477 (45%), Gaps = 60/477 (12%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
P L ++R C++ G +G QVHC K G N LI+MY AYK
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA 168
VF MPERNVV W+A++S ++ GD+ L + + S +++ +++A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 169 REL------------FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
E F+ M V N+L++ Y+ G + EKVF + +R++ SWN
Sbjct: 123 LEKGLQIHGFCLKIGFEMM----VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVV--PNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+I G+ G S AL+ F M+ E ++ P++FTL ++L ACS G + GK +H +
Sbjct: 179 MIAGFVHAGYGSKALDTFG-MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 275 SIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G+ + + +L+D+Y KCG + SA F+ + + +ISW+++I G A G +A
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG---------------FLYFQSMVDH 377
+ LF +++ Q D I+ L+R G S+VD
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 378 Y---SIIPQIEHYGCMADL--------------LGRAGLLDQAVSFVRKM---PMEPDAV 417
Y ++ + E C A++ G+ GL ++V +M +EPD V
Sbjct: 358 YLKCGLVDEAEK--CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNP--ANFVMLSNIYKDLGRWQDVARL 472
+ ++L AC ++ E F L+E P ++ + ++ GR ++ L
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 162/327 (49%), Gaps = 13/327 (3%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
++++ N L++ Y + KVF+ MPERNV SW+ L+ G+ NG +L F +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+G + PN+FT L AC L AL+ G +H + IG++ + VGN+L+DMY+KCG I
Sbjct: 100 RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK--NSREQPDGVTFVGILS 356
A VF + R +ISWN MI G G + AL F M+ N +E+PD T +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY-GCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+ G++ G +V P G + DL + G L A ++ E
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKT 277
Query: 416 AVIWTSL-LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+ W+SL LG + + VE L F+ L EL + + LS+I +G + D A L+
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGL-FKRLQELNSQ--IDSFALSSI---IGVFADFALLRQ 331
Query: 475 AMRDTGFR-KLPGCSVIECNDSVVEFY 500
+ KLP +SVV+ Y
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMY 358
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 168/341 (49%), Gaps = 14/341 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIVV 59
+ A KVF ++ + + +WNAM G+ + F M A + FTL ++
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++CS G + G+Q+H + GF S + +L+++Y G + A K F ++ E+
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 118 VVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE--- 170
++ W+++I Y G+ +G +RL +L + D S +I + + + ++
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 337
Query: 171 LFDKMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L K+P+ + N++++ Y G V EK F EM ++V SW V+I GY ++G
Sbjct: 338 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGNMFVGNAL 288
++ F +ML ++ P++ +AVL ACS G + G+ + E+ G K + +
Sbjct: 398 SVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 289 IDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+D+ + G ++ A + + + + ++ W T+++ +HG+
Sbjct: 457 VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 243 VVPNDF-TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
++PN LV++L C+R G D G VH Y G N+ N LIDMY KC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
VF+ + R+++SW+ +++G ++G+ +LSLF +M P+ TF L AC +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
+ G L +E + D+ + G +++A R++ ++ + W +
Sbjct: 121 NALEKG-LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNA 178
Query: 422 LLGA 425
++
Sbjct: 179 MIAG 182
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 292/545 (53%), Gaps = 13/545 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R+VFD E N WN M Y + + + LF E + + T + + S
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V G Q H +K + + +L+ MYS GSV ++ VF M ER+VV W
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN---RDV 180
MISA++ G G L+ ++ + I ++ + + + +E+ + R
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 181 MSW----NTLLNGYANSGDVGSFEKVFEE--MPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + + L++ Y+ SG + +K+FE ER+ +WN +I GY +NG F
Sbjct: 450 IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++ML E ++ PN T+ ++L ACS++G++D+GK +H ++ N+FV +AL+DMY+K
Sbjct: 510 RKML-EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G I+ A D+F+ R+ +++ TMI G HG A+SLF M+ S +PD +TFV +
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC++ GL+ +G F+ M + Y+I P EHY C+ D+LGR G +++A FV+ + E
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Query: 415 D-AVIWTSLLGACRTHKNVEIAELAFQHLIELEP-KNPANF-VMLSNIYKDLGRWQDVAR 471
+ A +W SLLG+C+ H +E+AE + L + + KN + + V+LSN+Y + +W+ V +
Sbjct: 689 NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDK 748
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
++ MR+ G +K G S IE V F S D+ HP + IY + GL +R ++
Sbjct: 749 VRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTT 808
Query: 532 LVDVA 536
L V
Sbjct: 809 LPTVT 813
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 218/472 (46%), Gaps = 46/472 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAA-APLNHFTLPIVVRSC 62
AR++FD +P+P T WN + G+ + ++ ++ M + A + +T +++C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAY------KVFGEMPER 116
++ ++ G+ VHC + + + +L+ MY + + D + KVF M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVS 167
NVV W +IS Y+ G R + +V V ++ IS I+ ++
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 168 ARELFDKMPN---RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
L K+ + +D+ ++ ++ YA GD+ S +VF+ ERN+ WN +IG Y +N
Sbjct: 238 G--LMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
+++E F + + ++V ++ T + A S L +++G+ H + + + +
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+L+ MY++CG + + VF + RD++SWNTMI+ +G + L L +M+
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 345 QPDGVTFVGILSAC-----------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+ D +T +LSA TH L+R G + F+ M + + D+
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSY------------LIDM 462
Query: 394 LGRAGLLDQAVS-FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
++GL+ + F E D W S++ + + E L F+ ++E
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 275/547 (50%), Gaps = 74/547 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD MPE + ++ + GY+ + + LF EM R LN TL V+ +CS
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM-RNLGIMLNEVTLATVISACS 184
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN------ 117
G + + + +A K + F+ T L+ MY + DA K+F EMPERN
Sbjct: 185 HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNV 244
Query: 118 -------------------------VVVWTAMI----------------SAYISCGDVGS 136
+V W MI + + CG S
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 137 GRRLLDL--APERDV---------------------VMWSIVISGYIESGDMVSARELFD 173
++DL A R V + + +I Y S D+ A + F+
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ S N L+ G+ +G V +VF++ +++++SWN +I GYA++ AL
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++M+ V P+ T+V+V A S LG+L+ GK H Y N + A+IDMYA
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 294 KCGVIESAVDVFNC---LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
KCG IE+A+++F+ + I WN +I G A HG+ AL L+ +++ +P+ +T
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
FVG+LSAC H GLV G YF+SM + I P I+HYGCM DLLG+AG L++A ++KM
Sbjct: 545 FVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P++ D +IW LL A RTH NVEIAELA L ++P + VMLSN+Y D GRW+DVA
Sbjct: 605 PVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVA 664
Query: 471 RLKIAMR 477
++ MR
Sbjct: 665 LVREEMR 671
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 204/499 (40%), Gaps = 107/499 (21%)
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ + V G Q+HC K G N ++C +++ MY+ + DA VF + + +
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
+ M+ Y+ + +L D+ PER V ++ +I GY ++ A ELF +M N +
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 181 M------------------SWN---------------------TLLNGYANSGDVGSFEK 201
M W+ LL+ Y + K
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV----------------- 244
+F+EMPERN+ +WNV++ GY++ G A E F Q + E D+V
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQ-ITEKDIVSWGTMIDGCLRKNQLDE 288
Query: 245 --------------PNDFTLVAVLLACSRLGALDMG--------------------KWVH 270
P++ +V +L A +R G +H
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 271 VYAES-----------IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
YA S K ++ NALI + K G++E A +VF+ +DI SWN M
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAM 408
Query: 320 INGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
I+G A + AL LF +M +S + +PD +T V + SA + +G + +G ++
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG-KRAHDYLNFS 467
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI--WTSLLGACRTHKNVEIAE 436
+I P + D+ + G ++ A++ + + I W +++ TH + ++A
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 437 LAFQHLIELEPK-NPANFV 454
+ L L K N FV
Sbjct: 528 DLYSDLQSLPIKPNSITFV 546
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 137/260 (52%), Gaps = 12/260 (4%)
Query: 123 AMISAYISCG---DVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
A++SA SC DV GR R+L + + + + V++ Y + + A +F
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D S+N +++GY S + K+F+ MPER+ S+ LI GYA+N ++S+A+E F+
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M G ++ N+ TL V+ ACS LG + + + A + +G +FV L+ MY C
Sbjct: 163 EMRNLG-IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
++ A +F+ + R++++WN M+NG + G A LFDQ+ + D V++ ++
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT----EKDIVSWGTMI 277
Query: 356 SACTHMGLVRDGFLYFQSMV 375
C + + +Y+ M+
Sbjct: 278 DGCLRKNQLDEALVYYTEML 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 33/235 (14%)
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC----- 295
G+ + LV+ L +C+ + G+ +H G N ++ N++++MYAKC
Sbjct: 35 GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLAD 94
Query: 296 ---------------------GVIES-----AVDVFNCLDRRDIISWNTMINGLAMHGNT 329
G + S A+ +F+ + R +S+ T+I G A +
Sbjct: 95 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 154
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
++A+ LF +M+N + VT ++SAC+H+G + D + QS+ + ++
Sbjct: 155 SEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRM-LQSLAIKLKLEGRVFVSTN 213
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ + L A +MP E + V W +L +E AE F + E
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 278/545 (51%), Gaps = 32/545 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+ +FD N ++NAM GYS E ++LF + ++ + +L V R
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFR 390
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ + EG Q++ +A K + + A I+MY ++ +A++VF EM R+ V
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMP 176
W A+I+A+ G G L ++ R + G I G + E+ +
Sbjct: 451 WNAIIAAHEQNGK-GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIV 509
Query: 177 NRDVMSWNT----LLNGYANSGDVGSFEKV----------------FEEMPERNVY---- 212
+ S ++ L++ Y+ G + EK+ E+M + +
Sbjct: 510 KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 569
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
SWN +I GY + DA F +M+ G + P+ FT VL C+ L + +GK +H
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
+ ++++ + L+DMY+KCG + + +F RRD ++WN MI G A HG +A
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
+ LF++M +P+ VTF+ IL AC HMGL+ G YF M Y + PQ+ HY M D
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK-NVEIAELAFQHLIELEPKNPA 451
+LG++G + +A+ +R+MP E D VIW +LLG C H+ NVE+AE A L+ L+P++ +
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETES 511
+ +LSN+Y D G W+ V+ L+ MR +K PGCS +E D + F D+ HP E
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEE 868
Query: 512 IYRAL 516
IY L
Sbjct: 869 IYEEL 873
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 192/423 (45%), Gaps = 44/423 (10%)
Query: 42 MNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG 101
+N+ + +F+ V + C+K GA+ G+Q H GF+ +F+ L+++Y+
Sbjct: 40 LNQVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSR 97
Query: 102 SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE 161
A VF +MP R+VV W MI+ Y D+ ++ P RDVV W+ ++SGY++
Sbjct: 98 DFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQ 157
Query: 162 SGDMVSARELFDKMP---------------------------------------NRDVMS 182
+G+ + + E+F M + DV++
Sbjct: 158 NGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+ LL+ YA +VF+ +PE+N SW+ +I G +N S AL+ FK+M
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V +VL +C+ L L +G +H +A + + V A +DMYAKC ++ A
Sbjct: 278 GVSQSI-YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+F+ + + S+N MI G + + AL LF ++ +S D ++ G+ AC +
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ +G L + S+ + D+ G+ L +A +M DAV W ++
Sbjct: 397 GLSEG-LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAI 454
Query: 423 LGA 425
+ A
Sbjct: 455 IAA 457
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 203/470 (43%), Gaps = 27/470 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A F+ MP + +WN+M +GY + +F +M R + T I+++
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI-EFDGRTFAIILK 188
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
CS G Q+H + + G + +AL++MY+ ++ +VF +PE+N V
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-- 178
W+A+I+ + + + + + + + + + S +S L ++
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 179 ------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D + L+ YA ++ + +F+ N S+N +I GY++ AL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +++ G + ++ +L V AC+ + L G ++ A ++ V NA IDMY
Sbjct: 369 LFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KC + A VF+ + RRD +SWN +I +G + L LF M SR +PD TF
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 353 GILSACT----------HMGLVRDGFLYFQ----SMVDHYSIIPQIEHYGCMADLLGRAG 398
IL ACT H +V+ G S++D YS IE + +
Sbjct: 488 SILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
Query: 399 LLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
+ + + KM ++ V W S++ + E A++ F ++E+
Sbjct: 548 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 60/284 (21%)
Query: 209 RNVYSWNVLIG---GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
R+V S+N + Y R FS + Q+ V +F+ V C++ GAL++
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQV---NSVSTTNFSFV--FKECAKQGALEL 66
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
GK H + G++ FV N L+ +Y SA VF+ + RD++SWN MING +
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 326 HGNTADALSLFDQMK-------NS----------------------RE--QPDGVTFVGI 354
+ A S F+ M NS RE + DG TF I
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD---QAVSFVRKMP 411
L C+ + D L Q + I+ ++ GC D++ + LLD + FV +
Sbjct: 187 LKVCS---FLEDTSLGMQI----HGIVVRV---GCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 412 M-----EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
+ E ++V W++++ C + + LA + E++ N
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNN---LLSLALKFFKEMQKVNA 277
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 275/522 (52%), Gaps = 9/522 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+M E N + M + Y+ V LF+ M + P + +++S
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLV 195
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ G Q+H + G N+ + T ++ MY G + A +VF +M + V T
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 124 MISAYISCGDVGSGRRL-LDLAPER---DVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
++ Y G +L +DL E D ++S+V+ ++ +++ +
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+V L++ Y S + F+E+ E N SW+ +I GY + +F +A++ FK
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+ + + N FT ++ ACS L ++G VH A G+ + +ALI MY+KC
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ A +VF +D DI++W I+G A +GN ++AL LF++M + +P+ VTF+ +L
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 495
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+AC+H GLV G +M+ Y++ P I+HY CM D+ R+GLLD+A+ F++ MP EPD
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A+ W L C THKN+E+ E+A + L +L+P++ A +V+ N+Y G+W++ A +
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKL 615
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
M + +K CS I+ + F D+ HP+T+ IY L+
Sbjct: 616 MNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 209/485 (43%), Gaps = 30/485 (6%)
Query: 38 LFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNS-FLCTALIEM 96
EM++A + ++ ++ + +C + ++ G +H + G + S L +++M
Sbjct: 70 FLQEMDKAGVS-VSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCVLQM 127
Query: 97 YSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG----DVGSGRRLLDLAPERDVVMW 152
Y S+ DA K+F EM E N V T MISAY G VG +L + M+
Sbjct: 128 YCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 153 SIVISGYIESGDMVSARELFDKMPNRDVMSWNT-----LLNGYANSGDVGSFEKVFEEMP 207
+ ++ + + R++ + + S NT ++N Y G + ++VF++M
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCS-NTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
+ + L+ GY + GR DAL+ F ++ EG V + F VL AC+ L L++GK
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACASLEELNLGK 305
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
+H +G + + VG L+D Y KC ESA F + + +SW+ +I+G
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 328 NTADALSLFDQMKNSREQP-DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
+A+ F +++ + T+ I AC+ + G + I Q
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ--- 422
Query: 387 YG--CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
YG + + + G LD A M PD V WT+ + + N A F+ ++
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 445 LEPK-NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS-- 501
K N F+ + G V + K + DT RK I+ D +++ Y+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGL---VEQGKHCL-DTMLRKYNVAPTIDHYDCMIDIYARS 537
Query: 502 --LDE 504
LDE
Sbjct: 538 GLLDE 542
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 214/362 (59%), Gaps = 7/362 (1%)
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
V + N ++ G+ G +KV ++NV +WN++IGGY RN ++ +AL+A K ML
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
D+ PN F+ + L AC+RLG L KWVH G + N + +AL+D+YAKCG I
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
++ +VF + R D+ WN MI G A HG +A+ +F +M+ PD +TF+G+L+ C+
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
H GL+ +G YF M +SI P++EHYG M DLLGRAG + +A + MP+EPD VIW
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
SLL + RT+KN E+ E+A Q+ L ++V+LSNIY +W+ +++ M
Sbjct: 338 RSLLSSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKE 394
Query: 480 GFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN----LVDV 535
G RK G S +E + F + D H ET++IY+ L GL + G+V + L+DV
Sbjct: 395 GIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDV 454
Query: 536 AQ 537
++
Sbjct: 455 SE 456
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL-------DLAP 145
+IE G G A KV ++NV+ W MI Y+ + L D+ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV----MSWNTLLNGYANSGDVGSFEK 201
+ S+ + GD+ A+ + M + + + + L++ YA GD+G+ +
Sbjct: 164 NKFSFASSLAACARL--GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF + +V WN +I G+A +G ++A+ F +M E V P+ T + +L CS G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDSITFLGLLTTCSHCG 280
Query: 262 ALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
L+ GK + + + + + A++D+ + G ++ A ++ + D++ W ++
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 320 INGLAMHGN 328
++ + N
Sbjct: 341 LSSSRTYKN 349
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G A+KV + N TWN M GY + + + M N F+ + +
Sbjct: 115 GLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAA 174
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C++ G + + VH + G + N+ L +AL+++Y+ G +G + +VF + +V +W
Sbjct: 175 CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIW 234
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMPN 177
AMI+ + + G R+ V SI G + + G + +E F M
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 178 R-----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLI 218
R + + +++ +G V ++ E MP E +V W L+
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G +R+VF + + + WNAM G++ + + +F+EM +P + T ++
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSP-DSITFLGLLT 274
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFL--CTALIEMYSAKGSVGDAYKVFGEMP-ERN 117
+CS G + EG++ + ++R F L A++++ G V +AY++ MP E +
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 118 VVVWTAMISAYISCGDVGSGR---RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
VV+W +++S+ + + G + L A D V+ S + S + REL K
Sbjct: 334 VVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSK 393
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 262/459 (57%), Gaps = 45/459 (9%)
Query: 103 VGDAYKVFGEMPERNVVVWTAMISAYI--------------------------------- 129
+ +A+KVF E+PE +V+ TA+I ++
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 130 --SCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
+ DV G++L L + +V + S V++ Y++ + AR FD + +V+S
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
L++GY + +F MPER+V +WN +IGG+++ GR +A+ F ML EG V
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+PN+ T + A S + + GK +H A + +G + N+FV N+LI Y+KCG +E ++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 303 DVFNCLD--RRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVGILSACT 359
FN L+ +R+I+SWN+MI G A +G +A+++F++M K++ +P+ VT +G+L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 360 HMGLVRDGFLYFQSMVDHYSI--IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
H GL+++G++YF V+ Y + ++EHY CM D+L R+G +A ++ MP++P
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
W +LLG C+ H N +A+LA ++EL+P++ +++VMLSN Y + WQ+V+ ++ M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+TG ++ GCS IE D + F + D+ + + +YR L
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 171/377 (45%), Gaps = 56/377 (14%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A KVFD++PE + + A+ + H + F + P N FT V+ S
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRP-NEFTFGTVIGSS 103
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + V+ G+Q+HC A K G N F+ +A++ Y ++ DA + F + + NVV T
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------- 175
+IS Y+ + L PER VV W+ VI G+ ++G A F M
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 176 PNR----------------------------------DVMSWNTLLNGYANSGDVG---- 197
PN +V WN+L++ Y+ G++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+F K+ EE +RN+ SWN +I GYA NGR +A+ F++M+ + ++ PN+ T++ VL AC
Sbjct: 284 AFNKLEEE--QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 258 SRLGALDMG-----KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
+ G + G K V+ Y + + + ++DM ++ G + A ++ +
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA--CMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 313 IIS-WNTMINGLAMHGN 328
I W ++ G +H N
Sbjct: 400 GIGFWKALLGGCQIHSN 416
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 151/322 (46%), Gaps = 18/322 (5%)
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
SA L K PN S L+ + +S + + KVF+E+PE +V S +IG + + R
Sbjct: 19 SANALVTKSPN----SIPELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESR 73
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+A +AFK++L G + PN+FT V+ + + + +GK +H YA +G N+FVG+
Sbjct: 74 HVEASQAFKRLLCLG-IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGS 132
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
A+++ Y K + A F+ +++S +I+G +ALSLF M +
Sbjct: 133 AVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP----ER 188
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR-----AGLLD 401
VT+ ++ + G + F M+ +IP + C + AG
Sbjct: 189 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 248
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYK 461
A + ++ + + +W SL+ N+E + LAF L E E +N ++ + Y
Sbjct: 249 HACA-IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL-EEEQRNIVSWNSMIWGYA 306
Query: 462 DLGRWQD-VARLKIAMRDTGFR 482
GR ++ VA + ++DT R
Sbjct: 307 HNGRGEEAVAMFEKMVKDTNLR 328
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 256/474 (54%), Gaps = 43/474 (9%)
Query: 55 LPIVVRSCS-KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
+P+++R+C+ V G+ +H + K G + + ++LI MY G V A KVF EM
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLD-LAPERDVVMWSIVISGYIESGDMVSARELF 172
PERNV W AMI Y+S GD L + ++ R+ V W +I GY + ++ ARELF
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELF 167
Query: 173 DKMPN--RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW---------------- 214
++MP ++V +W+ +L Y N+ + K FE++PE+N + W
Sbjct: 168 ERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEA 227
Query: 215 ---------------NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
N LI GYA+NG DA++AF M EG P+ T+ ++L AC++
Sbjct: 228 RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG-YEPDAVTVSSILSACAQ 286
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
G LD+G+ VH G + N FV NALIDMYAKCG +E+A VF + R + N+M
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSM 346
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I+ LA+HG +AL +F M++ +PD +TF+ +L+AC H G + +G F M
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-D 405
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ P ++H+GC+ LLGR+G L +A V++M ++P+ + +LLGAC+ H + E+AE
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM 465
Query: 440 QHLIE-----LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS 488
+ +IE + + +SN+Y RWQ L++ M G K PG S
Sbjct: 466 K-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 17/327 (5%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV--WTAMISAYISC--GDVGSGRRL--- 140
F + LI+ + ++GS A ++G + R V W +I +C V G+ L
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSE 71
Query: 141 -LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
+ DV++ S +IS Y + G +VSAR++FD+MP R+V +WN ++ GY ++GD
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 200 EKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
+FEE+ RN +W +I GY + A E F++M E V ++ V +
Sbjct: 132 SGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNR 191
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
++ D K+ E N FV + ++ Y + G + A +F + RD++ WNT
Sbjct: 192 KME--DARKFFEDIPEK-----NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
+I G A +G + DA+ F M+ +PD VT ILSAC G + G S+++H
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSLINHR 303
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVS 405
I + D+ + G L+ A S
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATS 330
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +F ++ + WN + GY+ D + F M P + T+ ++ +C+
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP-DAVTVSSILSACA 285
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++G + G +VH + RG + N F+ ALI+MY+ G + +A VF + R+V +
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 124 MISAYISCG------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
MIS G ++ S LDL P D + + V++ + G ++ ++F +M
Sbjct: 346 MISCLAIHGKGKEALEMFSTMESLDLKP--DEITFIAVLTACVHGGFLMEGLKIFSEMKT 403
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
+DV + NV + LI R+G+ +A K+M
Sbjct: 404 QDV---------------------------KPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
V+ PND L A+L AC +M + V E+ G N + N L
Sbjct: 437 HVK----PNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHL 483
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
LI + G AL + + G P L+ AC + + +GK +H +
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESIKF 75
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G ++ VG++LI MY KCG + SA VF+ + R++ +WN MI G +G+ A LF
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+++ R + VT++ ++ + F+ M + ++ + M +
Sbjct: 136 EEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMPFE---LKNVKAWSVMLGVYVN 189
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ A F +P E +A +W+ ++
Sbjct: 190 NRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 245/412 (59%), Gaps = 5/412 (1%)
Query: 110 FGEMPERNVVVWTAMISAYISCGDVGSGRR--LLDLAPERDVVMWSIVISGYIESGDMVS 167
FG +P+ + S+ +S +G ++ E D+ + + +I Y D S
Sbjct: 102 FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQAS 161
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
AR+LFD+MP++++++WN++L+ YA SGDV S VF+EM ER+V +W+ +I GY + G +
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+ ALE F QM+ G N+ T+V+V+ AC+ LGAL+ GK VH Y + + + +
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 288 LIDMYAKCGVIESAVDVF--NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
LIDMYAKCG I A VF + D + WN +I GLA HG ++L LF +M+ S+
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
PD +TF+ +L+AC+H GLV++ + +F+S+ + P+ EHY CM D+L RAGL+ A
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHD 400
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
F+ +MP++P + +LL C H N+E+AE + LIEL+P N +V L+N+Y +
Sbjct: 401 FISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQ 460
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
++ ++ AM G +K+ G S+++ + + F + D+ H ++ IY L+
Sbjct: 461 FRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 185/397 (46%), Gaps = 50/397 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A K K+ +P WN + G+S + + + ++ +M R P +H T P +++S
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLP-DHMTYPFLMKSS 118
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S+ + G +HC K G +W+ F+C LI MY + A K+F EMP +N+V W
Sbjct: 119 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 178
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------ 176
+++ AY GDV S R + D ERDVV WS +I GY++ G+ A E+FD+M
Sbjct: 179 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 238
Query: 177 -------------------NR---------------DVMSWNTLLNGYANSGDVGSFEKV 202
NR V+ +L++ YA G +G V
Sbjct: 239 ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 203 F--EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
F + E + WN +IGG A +G ++L+ F +M E + P++ T + +L ACS
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACSH- 356
Query: 261 GALDMGKWVHVYA--ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WN 317
G L W H + + G + ++D+ ++ G+++ A D + + + S
Sbjct: 357 GGLVKEAW-HFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
++NG HGN A ++ ++ + DG +VG+
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPHNDG-RYVGL 451
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 72/325 (22%)
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
L L+ E V ++ S SGD+ A + K+ + WN ++ G++NS +
Sbjct: 34 LGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRN----- 88
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
PE+++ + QML G ++P+ T ++ + SRL
Sbjct: 89 ------PEKSI--------------------SVYIQMLRFG-LLPDHMTYPFLMKSSSRL 121
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALI------------------------------- 289
+G +H G + ++F+ N LI
Sbjct: 122 SNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSIL 181
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ-MKNSREQPDG 348
D YAK G + SA VF+ + RD+++W++MI+G G AL +FDQ M+ + +
Sbjct: 182 DAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHY---SIIPQIEHYGCMADLLGRAGLLDQAVS 405
VT V ++ AC H+G + G + ++D + ++I Q + D+ + G + A S
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS----LIDMYAKCGSIGDAWS 297
Query: 406 -FVRKMPMEPDAVIWTSLLGACRTH 429
F R E DA++W +++G +H
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASH 322
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 266/528 (50%), Gaps = 73/528 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVF+ + N W +M GY + + +VLF M R N +T ++ +C+
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RENNVLGNEYTYGTLIMACT 253
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K A+ +G+ H K G + +S L T+L++MY
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY-------------------------- 287
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PN 177
+ CGD+ + RR+ + D+VMW+ +I GY +G + A LF KM PN
Sbjct: 288 -----VKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 178 ----RDVMS-----------------------WNT-----LLNGYANSGDVGSFEKVFEE 205
V+S W+T L++ YA + VFE
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
E+++ +WN +I G+++NG +AL F +M E V PN T+ ++ AC+ LG+L +
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SVTPNGVTVASLFSACASLGSLAV 461
Query: 266 GKWVHVYAESIGY--KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
G +H Y+ +G+ ++ VG AL+D YAKCG +SA +F+ ++ ++ I+W+ MI G
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
G+T +L LF++M +++P+ TF ILSAC H G+V +G YF SM Y+ P
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+HY CM D+L RAG L+QA+ + KMP++PD + + L C H ++ E+ + ++
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+L P + + +V++SN+Y GRW ++ M+ G K+ G S +E
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 219/471 (46%), Gaps = 57/471 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD++PEP+ W M Y L + +VV L+ ++ + +++C+
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACT 153
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G+++HC K +++ + T L++MY+ G + A+KVF ++ RNVV WT+
Sbjct: 154 ELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTS 212
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE--------LFDKM 175
MI+ Y+ G L + E +V+ I + +SA L
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+LL+ Y GD+ + +VF E ++ W +I GY NG ++AL F+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 236 QMLVEG-DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M +G ++ PN T+ +VL C + L++G+ VH + +G + V NAL+ MYAK
Sbjct: 333 KM--KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAK 389
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
C A VF +DI++WN++I+G + +G+ +AL LF +M + P+GVT +
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 355 LSACTHMG-----------LVRDGFLYFQS------MVDHYS----------IIPQIEH- 386
SAC +G V+ GFL S ++D Y+ I IE
Sbjct: 450 FSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK 509
Query: 387 -----------YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
YG D +G L ++ + K +P+ +TS+L AC
Sbjct: 510 NTITWSAMIGGYGKQGDTIGSLELFEEML----KKQQKPNESTFTSILSAC 556
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 204/430 (47%), Gaps = 25/430 (5%)
Query: 40 AEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSA 99
+ ++ AA++P +++ C+ ++R Q H V G + + T L+ +Y
Sbjct: 37 SSLHYAASSPC-----FLLLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGF 88
Query: 100 KGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIV 155
G DA VF ++PE + +W M+ Y + +L DL + D +++S
Sbjct: 89 FGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 156 ISGYIESGDMVSAREL---FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
+ E D+ + +++ K+P+ D + LL+ YA G++ S KVF ++ RNV
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVV 208
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
W +I GY +N + L F +M E +V+ N++T +++AC++L AL GKW H
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G + + + +L+DMY KCG I +A VFN D++ W MI G +G+ +A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
LSLF +MK +P+ VT +LS C GL+ + L V SI I
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN--LELGRSVHGLSIKVGIWDTNVANA 382
Query: 393 LLGRAGLLDQA--VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
L+ Q +V +M E D V W S++ + ++ A F H + E P
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF-HRMNSESVTP 441
Query: 451 ANFVMLSNIY 460
N V +++++
Sbjct: 442 -NGVTVASLF 450
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 23/342 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR+VF++ + W AM GY+ S + + LF +M P N T+ V+
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP-NCVTIASVLS 351
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C + G VH ++ K G W++ + AL+ MY+ DA VF E+++V
Sbjct: 352 GCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS---------GYIESGDMVSAREL 171
W ++IS + G + L V + ++ G + G + A +
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 172 -FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ + V LL+ YA GD S +F+ + E+N +W+ +IGGY + G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA--- 287
LE F++ML + PN+ T ++L AC G ++ GK Y S+ YK F +
Sbjct: 531 LELFEEML-KKQQKPNESTFTSILSACGHTGMVNEGK---KYFSSM-YKDYNFTPSTKHY 585
Query: 288 --LIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMH 326
++DM A+ G +E A+D+ + + D+ + ++G MH
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 627
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 24/314 (7%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ L++ Y G VF+++PE + Y W V++ Y N + ++ + ++
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G +D L AC+ L LD GK +H + N+ V L+DMYAKCG I
Sbjct: 135 KHG-FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEI 192
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+SA VFN + R+++ W +MI G + + L LF++M+ + + T+ ++ AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP---D 415
T + + G + +V IE C+ L + +S R++ E D
Sbjct: 253 TKLSALHQGKWFHGCLVK-----SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHL--IELEPKNPANFVMLSNIYK--------DLGR 465
V+WT+++ + +V A FQ + +E++P N V ++++ +LGR
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP----NCVTIASVLSGCGLIENLELGR 363
Query: 466 WQDVARLKIAMRDT 479
+K+ + DT
Sbjct: 364 SVHGLSIKVGIWDT 377
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 265/550 (48%), Gaps = 72/550 (13%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+VF +MP N TW A+ G +++ + F+EM+R+ + +T I +++C+
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGL 222
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
V+ G+ +H RGF + LC A ++
Sbjct: 223 RQVKYGKAIHTHVIVRGFV--TTLCVA-----------------------------NSLA 251
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV----- 180
+ Y CG++ G L + ERDVV W+ +I Y G V A E F KM N V
Sbjct: 252 TMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQ 311
Query: 181 --------------MSW--------------------NTLLNGYANSGDVGSFEKVFEEM 206
+ W N+++ Y+ G++ S +F+ M
Sbjct: 312 TFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM 371
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
R++ SW+ +IGGY + G + + F M G P DF L ++L + ++ G
Sbjct: 372 RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG-TKPTDFALASLLSVSGNMAVIEGG 430
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
+ VH A G + N V ++LI+MY+KCG I+ A +F DR DI+S MING A H
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G + +A+ LF++ +PD VTF+ +L+ACTH G + GF YF M + Y++ P EH
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
YGCM DLL RAG L A + +M + D V+WT+LL AC+ ++E A + ++EL+
Sbjct: 551 YGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD 610
Query: 447 PKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERH 506
P V L+NIY G ++ A ++ M+ G K PG S I+ D V F S D H
Sbjct: 611 PTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFH 670
Query: 507 PETESIYRAL 516
P++E IY L
Sbjct: 671 PQSEDIYNIL 680
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 227/514 (44%), Gaps = 47/514 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA--AAAPLNHFTLPIVVRS 61
AR+VFDKMP + +W ++ Y + + ++LF+ M A +P + L +V+++
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP-DTSVLSVVLKA 117
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C ++ + GE +H A K + ++ ++L++MY G + + +VF EMP RN V W
Sbjct: 118 CGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 122 TAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVISGYIESGDMVSARELFDKMPN 177
TA+I+ + G G D ++I + + + + +
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 178 RDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
R ++ N+L Y G++ +FE M ER+V SW LI Y R G+ A+E
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +M V PN+ T ++ AC+ L L G+ +H S+G ++ V N+++ MY+
Sbjct: 298 FIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
CG + SA +F + RDIISW+T+I G G + F M+ S +P
Sbjct: 357 TCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALAS 416
Query: 354 ILSACTHMGLVRDG------FLYF---------QSMVDHYSIIPQIEH----YG------ 388
+LS +M ++ G L F S+++ YS I+ +G
Sbjct: 417 LLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDD 476
Query: 389 -----CMADLLGRAGLLDQAVSFVR---KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
M + G +A+ K+ PD+V + S+L AC +++ F
Sbjct: 477 IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFN 536
Query: 441 HLIELEPKNPA--NFVMLSNIYKDLGRWQDVARL 472
+ E PA ++ + ++ GR D ++
Sbjct: 537 MMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKM 570
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 11/271 (4%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGD------VGSGRRLLDLAPERDVVMWSI 154
G++ A +VF +MP ++V WT++I Y++ + + S R++D A D + S+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMS----WNTLLNGYANSGDVGSFEKVFEEMPERN 210
V+ +S ++ L ++S ++LL+ Y G + +VF EMP RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
+W +I G GR+ + L F +M + + + +T L AC+ L + GK +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
+ G+ + V N+L MY +CG ++ + +F + RD++SW ++I G
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHM 361
A+ F +M+NS+ P+ TF + SAC +
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM-LVEGD 242
N+ L N+G++ + +VF++MP ++ SW +I Y +AL F M +V+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V P+ L VL AC + + G+ +H YA +++VG++L+DMY + G I+ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ + R+ ++W +I GL G + L+ F +M S E D TF L AC +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG----RAGLLDQAVSFVRKMPMEPDAVI 418
V+ G + + I+ C+A+ L G + + M E D V
Sbjct: 224 QVKYG-----KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVS 277
Query: 419 WTSLLGAC-RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
WTSL+ A R + V+ E + P N F + + L R
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 48/321 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F M + +W+ + GY + F+ M ++ P + F L ++
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD-FALASLLSVSG 422
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G QVH +A G + NS + ++LI MYS GS+ +A +FGE ++V TA
Sbjct: 423 NMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTA 482
Query: 124 MISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFDKMP 176
MI+ Y + G + +DL + D V + V++ SG + F+ M
Sbjct: 483 MINGY---AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM- 538
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
++ + P + Y ++ R GR SDA ++
Sbjct: 539 -----------------------QETYNMRPAKEHY--GCMVDLLCRAGRLSDA----EK 569
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI---DMYA 293
M+ E +D +L+AC G ++ G+ AE I + + AL+ ++Y+
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRA---AERI-LELDPTCATALVTLANIYS 625
Query: 294 KCGVIESAVDVFNCLDRRDII 314
G +E A +V + + +I
Sbjct: 626 STGNLEEAANVRKNMKAKGVI 646
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 249/421 (59%), Gaps = 12/421 (2%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV----VVWTAMISAYISCGDVGSGR--- 138
N + A+I+ YS G ++ F M R + + ++ + S D+ G+
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 139 -RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
L+ R + V+ Y G M A+++FD+M R+V+ WN ++ G+ +SGDV
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+F++M ER++ SWN +I ++ GR +ALE F +M+ +G P++ T+V VL
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG-FDPDEATVVTVLPIS 244
Query: 258 SRLGALDMGKWVHVYAESIG-YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
+ LG LD GKW+H AES G +K + VGNAL+D Y K G +E+A +F + RR+++SW
Sbjct: 245 ASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSW 304
Query: 317 NTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
NT+I+G A++G + LFD M + + P+ TF+G+L+ C++ G V G F M+
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
+ + + + EHYG M DL+ R+G + +A F++ MP+ +A +W SLL ACR+H +V++A
Sbjct: 365 ERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLA 424
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
E+A L+++EP N N+V+LSN+Y + GRWQDV +++ M+ RK G S I C+ S
Sbjct: 425 EVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI-CDVS 483
Query: 496 V 496
V
Sbjct: 484 V 484
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 43/368 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +VF + PN +NAM YSL + + F+ M ++ + +T +++SC
Sbjct: 54 YANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRGIWADEYTYAPLLKSC 112
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S +R G+ VH + GF + ++E+Y++ G +GDA KVF EM ERNVVVW
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR---- 178
MI + GDV G L ER +V W+ +IS + G A ELF +M ++
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 179 ------------------DVMSW------------------NTLLNGYANSGDVGSFEKV 202
D W N L++ Y SGD+ + +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F +M RNV SWN LI G A NG+ ++ F M+ EG V PN+ T + VL CS G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 263 LDMGKWVH-VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMI 320
++ G+ + + E + A++D+ ++ G I A N + W +++
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 321 NGLAMHGN 328
+ HG+
Sbjct: 413 SACRSHGD 420
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
MG A+KVFD+M E N WN M G+ + + LF +M+ + N ++
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS-----MIS 207
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN--- 117
S SK G RE ++ C +GF + ++ + ++ G V D K E +
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLG-VLDTGKWIHSTAESSGLF 266
Query: 118 ---VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+ V A++ Y GD+ + + R+VV W+ +ISG +G +LFD
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 175 MPNRDVMSWNT-----LLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARN 224
M ++ N +L + +G V E++F M ER + ++ +R+
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 225 GRFSDALEAFKQMLVEGD 242
GR ++A + K M V +
Sbjct: 387 GRITEAFKFLKNMPVNAN 404
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 280/602 (46%), Gaps = 87/602 (14%)
Query: 4 ARKVFDKMPE---PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
AR VF+ + + WN++ + + + L+ M R + + LP+++R
Sbjct: 108 ARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGM-RQRGLTGDGYILPLILR 166
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN--- 117
+C G H + G K N + L+ +Y G +GDAY +F EMP RN
Sbjct: 167 ACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS 226
Query: 118 --------------------------------VVVWTAMISAYISCG------------- 132
V WT+++S + CG
Sbjct: 227 WNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Query: 133 ---DVGSGRRL---LDLAPERDVVMWSIVISGYI--------------------ESGDMV 166
+ SG L + E + + + + GY+ + G +
Sbjct: 287 MSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVK 346
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE--------RNVYSWNVLI 218
A LF ++ N+ + SWN+L+ + ++G + +F E+ E NV +W +I
Sbjct: 347 DAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVI 406
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G GR D+LE F+QM V+ N T+ +L C+ L AL++G+ +H +
Sbjct: 407 KGCNVQGRGDDSLEYFRQMQF-SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM 465
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
N+ V NAL++MYAKCG++ VF + +D+ISWN++I G MHG ALS+FD+
Sbjct: 466 SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDR 525
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M +S PDG+ V +LSAC+H GLV G F SM + + PQ EHY C+ DLLGR G
Sbjct: 526 MISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSN 458
L +A V+ MPMEP + +LL +CR HKNV+IAE L LEP+ ++++LSN
Sbjct: 586 FLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSN 645
Query: 459 IYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRG 518
IY GRW++ A ++ + +K+ G S IE +F S E E+IY L
Sbjct: 646 IYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLED 705
Query: 519 LT 520
L
Sbjct: 706 LV 707
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 162/422 (38%), Gaps = 84/422 (19%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAP----------- 49
MG A +F +MP N +WN M G+S V +F M R P
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 50 ----------LNHF-------------TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWN 86
L +F L + C++ A+ E+VH K GF+
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 87 SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPE 146
ALI +Y +G V DA +F ++ + + W ++I++++ G + L E
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 147 --------RDVVMWSIVISGYIESGDMVSARELFDKMP---------------------- 176
+VV W+ VI G G + E F +M
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 177 -----------------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ +++ N L+N YA G + VFE + ++++ SWN +I
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGY 278
GY +G AL F +M+ G P+ LVAVL ACS G ++ G+ + + ++ G
Sbjct: 509 GYGMHGFAEKALSMFDRMISSG-FHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGL 567
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFD 337
+ ++D+ + G ++ A ++ + + ++N MH N A +
Sbjct: 568 EPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIAS 627
Query: 338 QM 339
Q+
Sbjct: 628 QL 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMPE---RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
L++ YA G + VFE + ++ WN ++ +G + +ALE ++ M G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
+ + + L +L AC LG + + H IG K N+ V N L+ +Y K G + A
Sbjct: 154 -LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
++F + R+ +SWN MI G + + A+ +F+ M+ +PD VT+ +LS +
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 362 GLVRDGFLYFQSM 374
G D YF M
Sbjct: 273 GKFEDVLKYFHLM 285
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/594 (29%), Positives = 282/594 (47%), Gaps = 83/594 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD++P+ N WNA+ GY + + + LF++M + P T+ + + +
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP-TRVTVSTCLSASA 285
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G V EG+Q H +A G + ++ L T+L+ Y G + A VF M E++VV W
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 124 MISAYISCGDVGSGRRLLDL---------------------------------------A 144
+IS Y+ G V + L +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF- 203
E D+V+ S V+ Y + G +V A+++FD +D++ WNTLL YA SG G ++F
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 204 ----EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM---------------------- 237
E +P NV +WN++I RNG+ +A + F QM
Sbjct: 466 GMQLEGVPP-NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 238 ------------LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFV 284
+ E + PN F++ L AC+ L +L +G+ +H Y ++ + + +
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
+L+DMYAKCG I A VF ++ N MI+ A++GN +A++L+ ++
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+PD +T +LSAC H G + F +V S+ P +EHYG M DLL AG ++A+
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ +MP +PDA + SL+ +C + E+ + + L+E EP+N N+V +SN Y G
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECN--DSVVEFYSLDERHPETESIYRAL 516
W +V +++ M+ G +K PGCS I+ + V F + D+ H I L
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 249/542 (45%), Gaps = 47/542 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F K+ N +W A+ ++ F EM P ++F +P V ++C
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP-DNFVVPNVCKACG 184
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
R G VH K G + F+ ++L +MY G + DA KVF E+P+RN V W A
Sbjct: 185 ALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNA 244
Query: 124 MISAYISCGDVGSGRRLLD------LAPERDVVMWSIVIS---GYIESGDMVSARELFDK 174
++ Y+ G RL + P R V + S G +E G A + +
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG 304
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
M +++ +LLN Y G + E VF+ M E++V +WN++I GY + G DA+
Sbjct: 305 MELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+ M +E + + TL ++ A +R L +GK V Y ++ ++ + + ++DMYAK
Sbjct: 364 QLMRLE-KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG I A VF+ +D+I WNT++ A G + +AL LF M+ P+ +T+ I
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 355 LSACTHMGLV---RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ + G V +D FL QS IIP + + M + + + G ++A+ F+RKM
Sbjct: 483 ILSLLRNGQVDEAKDMFLQMQS----SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 412 ---MEPDAVIWTSLLGAC---------RTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+ P+A T L AC RT I L L+ +E L ++
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS-------LVDM 591
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
Y G D+ + + + +LP +++++ Y+L E ++YR+L G+
Sbjct: 592 YAKCG---DINKAEKVFGSKLYSELP------LSNAMISAYALYGNLKEAIALYRSLEGV 642
Query: 520 TM 521
+
Sbjct: 643 GL 644
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 30/322 (9%)
Query: 46 AAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGD 105
A+ P N + SK + EQ H ++ F S LC G + +
Sbjct: 2 ASLPFNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCK--------NGEIKE 53
Query: 106 AYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
A + EM RN+ + G G L ERD+ + + +++GD
Sbjct: 54 ALSLVTEMDFRNLRI-----------GPEIYGEILQGCVYERDLSTGKQIHARILKNGDF 102
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
+ E + L+ YA + E +F ++ RNV+SW +IG R G
Sbjct: 103 YARNEYIE----------TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
AL F +ML E ++ P++F + V AC L G+ VH Y G + +FV
Sbjct: 153 LCEGALMGFVEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
++L DMY KCGV++ A VF+ + R+ ++WN ++ G +G +A+ LF M+ +
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 346 PDGVTFVGILSACTHMGLVRDG 367
P VT LSA +MG V +G
Sbjct: 272 PTRVTVSTCLSASANMGGVEEG 293
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 260/474 (54%), Gaps = 41/474 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+MP+ + + M + +++ + F EM + L+ F +P ++++
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGL-KLDAFIVPSLLKASR 128
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G+ +HC+ K ++ ++F+ ++LI+MYS FGE
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSK----------FGE----------- 167
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NRD 179
VG+ R++ E+D+V+++ +ISGY + A L M D
Sbjct: 168 ----------VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFK 235
V++WN L++G+++ + ++ E M + +V SW +I G N + A +AFK
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QML G + PN T++ +L AC+ L + GK +H Y+ G + + FV +AL+DMY KC
Sbjct: 278 QMLTHG-LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I A+ +F ++ +++N+MI A HG A+ LFDQM+ + E+ D +TF IL
Sbjct: 337 GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+AC+H GL G F M + Y I+P++EHY CM DLLGRAG L +A ++ M MEPD
Sbjct: 397 TACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPD 456
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
+W +LL ACR H N+E+A +A +HL ELEP+N N ++L+++Y + G W+ V
Sbjct: 457 LFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L+ Y G V KVF+EMP+R++ V+IG ARNG + ++L+ F++M +G +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG--LK 114
Query: 246 NDFTLVAVLLACSR-LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
D +V LL SR L + GK +H Y+ + F+ ++LIDMY+K G + +A V
Sbjct: 115 LDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKV 174
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
F+ L +D++ +N MI+G A + +AL+L MK +PD +T+ ++S +HM
Sbjct: 175 FSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM 231
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P+ +W ++ +G + F +M P N T+ ++ +C+ ++ G+
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP-NSATIITLLPACTTLAYMKHGK 308
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
++H + G + + F+ +AL++MY G + +A +F + P++ V + +MI Y + G
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 133 DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----PNRDVMSWNTLLN 188
L D A ELFD+M D +++ +L
Sbjct: 369 -------LAD------------------------KAVELFDQMEATGEKLDHLTFTAILT 397
Query: 189 GYANSG--DVGS-----FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+++G D+G + + +P Y+ V + G R G+ +A E K M +E
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG--RAGKLVEAYEMIKAMRME- 454
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWV--HVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
P+ F A+L AC G +++ + H+ GN G L +YA G E
Sbjct: 455 ---PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGN---GLLLTSLYANAGSWE 508
Query: 300 SAV 302
S V
Sbjct: 509 SVV 511
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 265/498 (53%), Gaps = 17/498 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTE---SHRDVVVLFAEMNRA--AAAPLNHFTLPIV 58
A K+FD+MP N TWN + +G + +HR + F ++R L+H + +
Sbjct: 90 ADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHR-AHLGFCYLSRILFTDVSLDHVSFMGL 148
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+R C+ + ++ G Q+HC+ K+G + + F T+L+ Y G + +A +VF + +R++
Sbjct: 149 IRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDL 208
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPER------DVVMWSIVISG-YIESGDMVSAREL 171
V+W A++S+Y+ G + LL L D +S ++S IE G + A L
Sbjct: 209 VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI-L 267
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F D+ LLN YA S + + FE M RNV SWN +I G+A+NG +A+
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F QML+E ++ P++ T +VL +C++ A+ K V G + V N+LI
Sbjct: 328 RLFGQMLLE-NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y++ G + A+ F+ + D++SW ++I LA HG ++L +F+ M + QPD +TF
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITF 445
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +LSAC+H GLV++G F+ M + Y I + EHY C+ DLLGRAG +D+A + MP
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
EP + G C H+ E + + L+E+EP P N+ +LSN Y G W A
Sbjct: 506 TEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAAL 565
Query: 472 LKIAMRDTGFR-KLPGCS 488
L+ R + K PGCS
Sbjct: 566 LRKRERRNCYNPKTPGCS 583
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 185/401 (46%), Gaps = 21/401 (5%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC 131
+Q H K+G + FL L++ Y+ DA K+F EMP RN+V W +I I
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 132 -GDVGSGRRL----LDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMPNRDVMS 182
GD L L DV + + G I +S +M + +L M + + S
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 183 ----WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+L++ Y G + +VFE + +R++ WN L+ Y NG +A K M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 239 VEGDVVPND-FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ + D FT ++L AC ++ GK +H + Y+ ++ V AL++MYAK
Sbjct: 236 SDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+ A + F + R+++SWN MI G A +G +A+ LF QM QPD +TF +LS+
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C + + Q+MV + + R G L +A+ + EPD V
Sbjct: 352 CAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLV 409
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIE-LEPKNPANFVMLS 457
WTS++GA +H E + F+ +++ L+P +LS
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR+ F+ M N +WNAM G++ R+ + LF +M P + T V+
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP-DELTFASVLS 350
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+K A+ E +QV + K+G + +LI YS G++ +A F + E ++V
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER---DVVMWSIVISGYIESGDMVSARELFDKMP- 176
WT++I A S G ++ + ++ D + + V+S G + F +M
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGG 220
+ + L++ +G + V MP E + ++ GG
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGG 519
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 287/557 (51%), Gaps = 57/557 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A++VFD MP + +WNAM GY + + +LF +M+ N T +V
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK-----NVVTWTSMVY 239
Query: 61 SCSKAGAVREGEQVHCVAAKR----------GFKWNSFLCTAL----------------- 93
+ G VRE ++ C +R GF WN AL
Sbjct: 240 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
Query: 94 ---IEMYSAKGSVGDAYKVFGEMPERNVV------------VWTAMISAYISCGDVGSGR 138
I + A G +G ++ GE V+ + +++ Y S G + S +
Sbjct: 300 ETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-RDVMSWNTLLNGYANSGDVG 197
LL+ D+ +I+I+ Y+++GD+ A LF+++ + D +SW ++++GY +GDV
Sbjct: 360 SLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+F+++ +++ +W V+I G +N F++A M+ G + P + T +L +
Sbjct: 418 RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG-LKPLNSTYSVLLSSA 476
Query: 258 SRLGALDMGKWVH-VYAESIG-YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
LD GK +H V A++ Y ++ + N+L+ MYAKCG IE A ++F + ++D +S
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
WN+MI GL+ HG AL+LF +M +S ++P+ VTF+G+LSAC+H GL+ G F++M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH---KNV 432
+ YSI P I+HY M DLLGRAG L +A F+ +P PD ++ +LLG C + K+
Sbjct: 597 ETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDA 656
Query: 433 E-IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
E IAE A L+EL+P N V L N+Y LGR ++ M G +K PGCS +
Sbjct: 657 EGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVV 716
Query: 492 CNDSVVEFYSLDERHPE 508
N F S D+ E
Sbjct: 717 VNGRANVFLSGDKSASE 733
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 184/384 (47%), Gaps = 56/384 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR +F+ MPE N T NAM GY + LF EM
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------------------ 134
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
K W L TAL + G DA ++F EMPERNVV
Sbjct: 135 ------------------PKNVVSWTVML-TALCD----DGRSEDAVELFDEMPERNVVS 171
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W +++ I GD+ +++ D P RDVV W+ +I GYIE+ M A+ LF M ++V
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
++W +++ GY GDV ++F EMPERN+ SW +I G+A N + +AL F +M +
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Query: 241 GDVV-PNDFTLVAVLLACSRLGA--LDMGKWVHVYA-----ESIGYKGNMFVGNALIDMY 292
D V PN TL+++ AC LG +G+ +H E++ + G + +L+ MY
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL--AKSLVHMY 349
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
A G+I SA + N + D+ S N +IN +G+ A +LF+++K+ D V++
Sbjct: 350 ASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWT 404
Query: 353 GILSACTHMGLVRDGFLYFQSMVD 376
++ G V F FQ + D
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHD 428
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 160 IESGDMVSARELFDKMPNRD----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+ G +V AR L DK+P R V+ W +LL+ YA +G + +FE MPERN+ + N
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA--CSRLGALDMGKWVHVYA 273
++ GY + R ++A F++M P + V+L C + D V ++
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREM-------PKNVVSWTVMLTALCDDGRSEDA---VELFD 162
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
E + N+ N L+ + G +E A VF+ + RD++SWN MI G + +A
Sbjct: 163 EMP--ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
LF M + + VT+ ++ G VR+ + F M
Sbjct: 221 LLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 257/486 (52%), Gaps = 15/486 (3%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+++ C++ GAV E + H + + + L LI YS G V A +VF M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARE 170
+V W MI Y LD+ E S V+S + D + ++
Sbjct: 127 LVSWNTMIGLYTRNRMESEA---LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 171 L----FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
L + ++ LL+ YA G + +VFE M +++ +W+ ++ GY +N
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+ +AL +++ + N FTL +V+ ACS L AL GK +H G+ N+FV +
Sbjct: 244 YEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+ +DMYAKCG + + +F+ + +++ WNT+I+G A H + + LF++M+ P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ VTF +LS C H GLV +G +F+ M Y + P + HY CM D+LGRAGLL +A
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
++ +P +P A IW SLL +CR +KN+E+AE+A + L ELEP+N N V+LSNIY +W
Sbjct: 423 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQW 482
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
+++A+ + +RD +K+ G S I+ D V F + HP I L L + R
Sbjct: 483 EEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKF 542
Query: 527 GYVPNL 532
GY P++
Sbjct: 543 GYKPSV 548
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 164/335 (48%), Gaps = 12/335 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD M E + +WN M Y+ + + +F EM R + FT+ V+ +C
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACG 173
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
E +++HC++ K N ++ TAL+++Y+ G + DA +VF M +++ V W++
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 124 MISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
M++ Y+ + RR ++ E++ S VI ++ +++ +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+V ++ ++ YA G + +F E+ E+N+ WN +I G+A++ R + + F+
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M +G + PN+ T ++L C G ++ G ++ + + G N+ + ++D+ +
Sbjct: 354 KMQQDG-MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 295 CGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGN 328
G++ A ++ + S W +++ ++ N
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 253/474 (53%), Gaps = 14/474 (2%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
+L V+SC R +HC K + F+ L+ Y G A K+F EM
Sbjct: 36 SLIAAVKSCVSIELCR---LLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 114 PERNVVVWTAMISAYI------SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS 167
PER++V W ++IS Y C +V S + ++ + V + +IS + G
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 168 ARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
R + + +V N +N Y +GD+ S K+FE++ +N+ SWN +I + +
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
NG L F G P+ T +AVL +C +G + + + +H G+ GN
Sbjct: 213 NGLAEKGLAYFNMSRRVGHE-PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+ AL+D+Y+K G +E + VF+ + D ++W M+ A HG DA+ F+ M +
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
PD VTF +L+AC+H GLV +G YF++M Y I P+++HY CM DLLGR+GLL A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+++MPMEP + +W +LLGACR +K+ ++ A + L ELEP++ N+VMLSNIY
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
G W+D +R++ M+ G + GCS IE + + +F D HPE+E I + L+
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 18/316 (5%)
Query: 1 MGH---ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM--NRAAAAPLNHFTL 55
+GH A K+FD+MPE + +WN++ +GYS + + M + P N T
Sbjct: 79 LGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRP-NEVTF 137
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
++ +C G+ EG +H + K G + A I Y G + + K+F ++
Sbjct: 138 LSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI 197
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLA------PERDV---VMWSIVISGYIESGDMV 166
+N+V W MI ++ G G +++ P++ V+ S G + +
Sbjct: 198 KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+F ++ LL+ Y+ G + VF E+ + +W ++ YA +G
Sbjct: 258 HGLIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVG 285
DA++ F +++V + P+ T +L ACS G ++ GK + ++ +
Sbjct: 317 GRDAIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 286 NALIDMYAKCGVIESA 301
+ ++D+ + G+++ A
Sbjct: 376 SCMVDLLGRSGLLQDA 391
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 40/315 (12%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+F+ + N +WN M + L + + + M+R + T V+RSC
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIH-LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM 248
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
G VR + +H + GF N + TAL+++YS G + D+ VF E+ + + WTAM+
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAML 308
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNT 185
+AY + G RD + ++ Y S D V ++
Sbjct: 309 AAYATHG------------FGRDAIKHFELMVHYGISPDHV---------------TFTH 341
Query: 186 LLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
LLN ++SG V + FE M +R + ++ ++ R+G DA K+M +E
Sbjct: 342 LLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPME 401
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
P+ A+L AC +G K E G +V L ++Y+ G+ +
Sbjct: 402 ----PSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV--MLSNIYSASGLWK 455
Query: 300 SAVDVFNCLDRRDII 314
A + N + ++ ++
Sbjct: 456 DASRIRNLMKQKGLV 470
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 273/501 (54%), Gaps = 13/501 (2%)
Query: 45 AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG 104
A PL L ++R+ S ++ +++H + + GF + L T L+E G +
Sbjct: 3 AKQTPLTKQMLSELLRASS--SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMC 60
Query: 105 DAYKVFGEMPERNVVVWTAMISAYIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
A +VF EM + + +W + Y+ + +++ DL D + V+
Sbjct: 61 YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAIS 120
Query: 161 ESGDMVSARELFDKMPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
+ GD L + + L+ Y G++ S E +FE M +++ +WN
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
+ + G + ALE F +M + V + FT+V++L AC +LG+L++G+ ++ A
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
N+ V NA +DM+ KCG E+A +F + +R+++SW+TMI G AM+G++ +AL+LF
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV--DHYSIIPQIEHYGCMADLL 394
M+N +P+ VTF+G+LSAC+H GLV +G YF MV + ++ P+ EHY CM DLL
Sbjct: 300 TTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL 359
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
GR+GLL++A F++KMP+EPD IW +LLGAC H+++ + + L+E P + V
Sbjct: 360 GRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHV 419
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+LSNIY G+W V +++ MR G +K+ S +E + F D+ HP++++IY
Sbjct: 420 LLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYE 479
Query: 515 ALRGLTMLLRLHGYVPNLVDV 535
L + +R GYVP+ V
Sbjct: 480 KLDEILKKIRKMGYVPDTCSV 500
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 157/371 (42%), Gaps = 80/371 (21%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +AR+VFD+M +P WN +F GY + + ++L+ +M P + FT P VV+
Sbjct: 59 MCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRP-DEFTYPFVVK 117
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S+ G G +H K GF + T L+ MY G + A +F M +++V
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 121 WTAMISAYI--------------------------------SCGDVGS---GRRLLDLAP 145
W A ++ + +CG +GS G + D A
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 146 ERDVVMWSIV----ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+ ++ IV + +++ G+ +AR LF++M R+V+SW+T++ GYA +GD
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS----- 292
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+AL F M EG + PN T + VL ACS G
Sbjct: 293 --------------------------REALTLFTTMQNEG-LRPNYVTFLGVLSACSHAG 325
Query: 262 ALDMGK-----WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIIS 315
++ GK V +++ + + ++D+ + G++E A + + D
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 316 WNTMINGLAMH 326
W ++ A+H
Sbjct: 384 WGALLGACAVH 394
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 273/536 (50%), Gaps = 10/536 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VF+ + + W + + Y D + L + M A P N++T +++
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP-NNYTFDTALKASI 258
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA + VH K + + + L+++Y+ G + DA+KVF EMP+ +VV W+
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------- 176
MI+ + G L E VV +S + + L +++
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 177 -NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ D+ N L++ YA + + K+F E+ +N SWN +I GY G A F+
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+ L V + T + L AC+ L ++D+G VH A + V N+LIDMYAKC
Sbjct: 439 EAL-RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKC 497
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I+ A VFN ++ D+ SWN +I+G + HG AL + D MK+ +P+G+TF+G+L
Sbjct: 498 GDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVL 557
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
S C++ GL+ G F+SM+ + I P +EHY CM LLGR+G LD+A+ + +P EP
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS 617
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+IW ++L A N E A + + ++++ PK+ A +V++SN+Y +W +VA ++ +
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKS 677
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
M++ G +K PG S IE V F HP+ + I L L M GYVP+
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 26/439 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +FD+MPE N ++ + GY+ +D + L++ ++R H P V S
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREG-----HELNPHVFTSFL 153
Query: 64 KAGAVREGEQV----HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
K + ++ H K G+ N+F+ ALI YS GSV A VF + +++V
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 120 VWTAMISAYISCG------DVGSGRRLLDLAPER---DVVMWSIVISGYIESGDMVSARE 170
VW ++S Y+ G + S R+ P D + + + G + V +
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-Q 272
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ D LL Y GD+ KVF EMP+ +V W+ +I + +NG ++A
Sbjct: 273 ILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEA 332
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
++ F +M E VVPN+FTL ++L C+ +G+ +H +G+ +++V NALID
Sbjct: 333 VDLFIRMR-EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
+YAKC +++AV +F L ++ +SWNT+I G G A S+F + ++ VT
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F L AC + + G + + + ++ + D+ + G + A S +M
Sbjct: 452 FSSALGACASLASMDLG-VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 411 PMEPDAVIWTSLLGACRTH 429
D W +L+ TH
Sbjct: 511 E-TIDVASWNALISGYSTH 528
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KVF++MP+ + W+ M + + V LF M A P N FTL ++
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-NEFTLSSILN 356
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ GEQ+H + K GF + ++ ALI++Y+ + A K+F E+ +N V
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS------GYIESGDM-VSARELFD 173
W +I Y + G+ G + A V + + S + S D+ V L
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 174 KMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
K N + V N+L++ YA GD+ + VF EM +V SWN LI GY+ +G AL
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALR 536
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
++ + D PN T + VL CS G +D G+
Sbjct: 537 IL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 135/319 (42%), Gaps = 31/319 (9%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++R C + + +HC K+G + F L+ Y G DA +F EMPERN
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
V + + Y +G RL E + +++ S +LF +
Sbjct: 115 NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFT-------------SFLKLFVSLDK 161
Query: 178 RDVMSW-----------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGG 220
++ W L+N Y+ G V S VFE + +++ W ++
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y NG F D+L+ M + G +PN++T L A LGA D K VH Y
Sbjct: 222 YVENGYFEDSLKLLSCMRMAG-FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ VG L+ +Y + G + A VFN + + D++ W+ MI +G +A+ LF +M+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 341 NSREQPDGVTFVGILSACT 359
+ P+ T IL+ C
Sbjct: 341 EAFVVPNEFTLSSILNGCA 359
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 142/337 (42%), Gaps = 54/337 (16%)
Query: 143 LAPERDVVMWSIVISGYIESGDMVSAR----ELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
+ P D + ++ I+ D +SA+ ++ K D+ + N LLN Y +G
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVLLAC 257
+F+EMPERN S+ L GYA D + + ++ EG ++ P+ FT L
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFV- 157
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
L ++ W+H +GY N FVG ALI+ Y+ CG ++SA VF + +DI+ W
Sbjct: 158 -SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTF-------------------------- 351
+++ +G D+L L M+ + P+ TF
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 352 ---------VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
VG+L T +G + D F F M + ++P + M + G ++
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVP----WSFMIARFCQNGFCNE 331
Query: 403 AVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
AV +R+ + P+ +S+L C K + E
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 273/565 (48%), Gaps = 49/565 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLF-----AEMNRAAAAPLNHFTLPI 57
A VFD++ N ++NA+ Y+ E + D LF + + AA + ++
Sbjct: 75 QALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISC 134
Query: 58 VVRSCSKAGAVREGE---QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
V+++ S G QVH + GF + F+ +I Y+ ++ A KVF EM
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS 194
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLL-------DLAP---------------------- 145
ER+VV W +MIS Y G +++ D P
Sbjct: 195 ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL 254
Query: 146 -----------ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG 194
+ D+ + + VI Y + G + AR LFD+M +D +++ +++GY G
Sbjct: 255 EVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHG 314
Query: 195 DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
V +F EM + +WN +I G +N + + +F++M+ G PN TL ++L
Sbjct: 315 LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR-PNTVTLSSLL 373
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
+ + L GK +H +A G N++V ++ID YAK G + A VF+ R +I
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI 433
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+W +I A+HG++ A SLFDQM+ +PD VT +LSA H G F SM
Sbjct: 434 AWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+ Y I P +EHY CM +L RAG L A+ F+ KMP++P A +W +LL ++EI
Sbjct: 494 LTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEI 553
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
A A L E+EP+N N+ +++N+Y GRW++ ++ M+ G +K+PG S IE
Sbjct: 554 ARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEK 613
Query: 495 SVVEFYSLDERHPETESIYRALRGL 519
+ F + D ++ +Y + GL
Sbjct: 614 GLRSFIAKDSSCERSKEMYEIIEGL 638
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 78/306 (25%)
Query: 1 MGHARKVFDKMPEPNT-------------------------------ATWNAMFNGYSLT 29
+ +AR +FD+M E ++ +TWNAM +G
Sbjct: 285 LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQN 344
Query: 30 ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFL 89
H +V+ F EM R + P N TL ++ S + + ++ G+++H A + G N ++
Sbjct: 345 NHHEEVINSFREMIRCGSRP-NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD----LAP 145
T++I+ Y+ G + A +VF +R+++ WTA+I+AY GD S L D L
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNR------------------------DVM 181
+ D V + V+S + SGD A+ +FD M + D M
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 182 S-------------WNTLLNGYANSGD--VGSF--EKVFEEMPERNVYSWNVLIGGYARN 224
W LLNG + GD + F +++FE PE N ++ ++ Y +
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQA 582
Query: 225 GRFSDA 230
GR+ +A
Sbjct: 583 GRWEEA 588
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 274/590 (46%), Gaps = 104/590 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ +FD+MPE +T WNA+ GYS D LF M + +P + TL ++ C
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSP-SATTLVNLLPFCG 162
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG------------------- 104
+ G V +G VH VAAK G + +S + ALI YS +G
Sbjct: 163 QCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNT 222
Query: 105 ------------DAYKVFGEMPERNV---------------------------------V 119
+A VF M E+NV
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDIS 282
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
V T+++ AY CG + S RL A + +V + ++S Y E GDM A F K
Sbjct: 283 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 342
Query: 178 -------------------------------------RDVMSWNTLLNGYANSGDVGSFE 200
+ N L+ Y+ DV +
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+FE++ E + SWN +I G ++GR S A E F QM++ G ++P+ T+ ++L CS+L
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
L++GK +H Y ++ FV ALIDMYAKCG A VF + +WN+MI
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 522
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+G ++ G ALS + +M+ +PD +TF+G+LSAC H G V +G + F++M+ + I
Sbjct: 523 SGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 582
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
P ++HY M LLGRA L +A+ + KM ++PD+ +W +LL AC H+ +E+ E +
Sbjct: 583 SPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVAR 642
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
+ L+ KN +V++SN+Y W DV R++ M+D G+ G S I
Sbjct: 643 KMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 32/287 (11%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+R V +LLN Y G V S + +F+EMPER+ WN LI GY+RNG DA + F
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
ML +G P+ TLV +L C + G + G+ VH A G + + V NALI Y+KC
Sbjct: 142 MLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ SA +F + + +SWNTMI + G +A+++F M + VT + +LS
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 357 ACT-----HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM--------------------- 390
A H +V+ G + S+V S++ GC+
Sbjct: 261 AHVSHEPLHCLVVKCGMVNDISVVT--SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 391 ADLLGRAGLLDQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEI 434
G +D AV + R++ M+ DAV +L C+ +++I
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 151/364 (41%), Gaps = 80/364 (21%)
Query: 36 VVLFAEMNRAAAAPLNHFTLPIVVRSCSKA--GAVREGEQVHCVAAKRGFKWNSFLCTAL 93
+ +F ++ R++ P NHFT+ I +++ + + + EQV K G ++ T+L
Sbjct: 33 ITIFRDLLRSSLTP-NHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSL 91
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI------------------------ 129
+ +Y KG V A +F EMPER+ VVW A+I Y
Sbjct: 92 LNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA 151
Query: 130 -----------SCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFDK 174
CG V GR + +A E D + + +IS Y + ++ SA LF +
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
M ++ +SWNT++ Y+ SG VF+ M E+NV
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV----------------------- 248
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++ P T++ + L A + +H G ++ V +L+ Y++
Sbjct: 249 -------EISP--VTIINL------LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG + SA ++ + I+ ++++ A G+ A+ F + + + D V VGI
Sbjct: 294 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 353
Query: 355 LSAC 358
L C
Sbjct: 354 LHGC 357
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 11/234 (4%)
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACS-RLGALDMG-KWVHVYAESIGYKGNMFVG 285
S + F+ +L + PN FT+ L A + + + + V + G ++V
Sbjct: 30 SSPITIFRDLL-RSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVK 88
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
+L+++Y K G + SA +F+ + RD + WN +I G + +G DA LF M
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 346 PDGVTFVGILSACTHMGLVRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
P T V +L C G V G ++ + + Q+++ + + L A
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN--ALISFYSKCAELGSAE 206
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL----IELEPKNPANFV 454
R+M + V W +++GA E A F+++ +E+ P N +
Sbjct: 207 VLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 271/550 (49%), Gaps = 34/550 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR V P N +W ++ +G + +V F EM R P N FT P ++ +
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP-NDFTFPCAFKAVA 119
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G+Q+H +A K G + F+ + +MY DA K+F E+PERN+ W A
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 124 MISAYISCGDVGSG------RRLLDLAPERDVVMWSIVISGYIESGD------------M 165
IS ++ G R +D P SI ++ +
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPN------SITFCAFLNACSDWLHLNLGMQLHG 233
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
+ R FD DV N L++ Y + S E +F EM +N SW L+ Y +N
Sbjct: 234 LVLRSGFDT----DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN- 288
Query: 226 RFSDALEAFKQMLVEGDVV-PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
D + + D+V +DF + +VL AC+ + L++G+ +H +A + +FV
Sbjct: 289 -HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNS 342
G+AL+DMY KCG IE + F+ + +++++ N++I G A G AL+LF++M +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
P+ +TFV +LSAC+ G V +G F SM Y I P EHY C+ D+LGRAG++++
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
A F++KMP++P +W +L ACR H ++ LA ++L +L+PK+ N V+LSN +
Sbjct: 468 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
GRW + ++ ++ G +K G S I + V F + D H + I L L
Sbjct: 528 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 587
Query: 523 LRLHGYVPNL 532
+ GY P+L
Sbjct: 588 MEAAGYKPDL 597
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+N Y+ S V P RNV SW LI G A+NG FS AL F +M EG V
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG-V 104
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
VPNDFT A + L GK +H A G ++FVG + DMY K + + A
Sbjct: 105 VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT---H 360
+F+ + R++ +WN I+ G +A+ F + + P+ +TF L+AC+ H
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 361 MGL--------VRDGF----LYFQSMVDHYSIIPQI 384
+ L +R GF ++D Y QI
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Query: 262 ALDMGKWVHV-YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
++ +G+ VH +++ F+ N LI+MY+K ESA V R+++SW ++I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+GLA +G+ + AL F +M+ P+ TF A + L G V I
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 381 IPQIEHYGCMA-DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ GC A D+ + L D A ++P E + W + +
Sbjct: 141 LDVF--VGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAFI 181
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 287/537 (53%), Gaps = 22/537 (4%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
E + +NA+ +G+ + S D + + EM P + +T P +++ S A + + +
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP-DKYTFPSLLKG-SDAMELSDVK 180
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN-VVVWTAMISAYISC 131
+VH +A K GF + ++ + L+ YS SV DA KVF E+P+R+ V+W A+++ Y
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 132 GD------VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDKMPNRDVM 181
V S R + R + + V+S + SGD+ + R + D++
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTI--TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
N L++ Y S + +FE M ER++++WN ++ + G L F++ML G
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY----KGNMFVGNALIDMYAKCGV 297
+ P+ TL VL C RL +L G+ +H Y G N F+ N+L+DMY KCG
Sbjct: 359 -IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+ A VF+ + +D SWN MING + AL +F M + +PD +TFVG+L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+H G + +G + M Y+I+P +HY C+ D+LGRA L++A P+ + V
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+W S+L +CR H N ++A +A + L ELEP++ +V++SN+Y + G++++V ++ AMR
Sbjct: 538 VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMR 597
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVD 534
+K PGCS I + V F++ ++ HPE +SI+ L ++ +HG+ VD
Sbjct: 598 QQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLS--LVISHMHGHEYMTVD 652
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 160/354 (45%), Gaps = 73/354 (20%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKGSVGDAYKVFGE 112
T ++ C++ G+Q+H ++GF +S T+L+ MY+ G + A VFG
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG- 120
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
ERDV ++ +ISG++ +G + A E +
Sbjct: 121 -------------------------------GSERDVFGYNALISGFVVNGSPLDAMETY 149
Query: 173 DKMPNRDVM----SWNTLLNG-------------------------YANSGDVGSF---- 199
+M ++ ++ +LL G Y SG V S+
Sbjct: 150 REMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFM 209
Query: 200 -----EKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
+KVF+E+P+R + WN L+ GY++ RF DAL F +M EG V + T+ +V
Sbjct: 210 SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG-VGVSRHTITSV 268
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
L A + G +D G+ +H A G ++ V NALIDMY K +E A +F +D RD+
Sbjct: 269 LSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL 328
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+WN+++ G+ L+LF++M S +PD VT +L C + +R G
Sbjct: 329 FTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 164/348 (47%), Gaps = 23/348 (6%)
Query: 4 ARKVFDKMPE-PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
A+KVFD++P+ ++ WNA+ NGYS D +++F++M R ++ T+ V+ +
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM-REEGVGVSRHTITSVLSAF 272
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ +G + G +H +A K G + + ALI+MY + +A +F M ER++ W
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 123 AMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM--- 175
+++ + CGD + R+L D+V + V+ + RE+ M
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 176 -----PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ + N+L++ Y GD+ VF+ M ++ SWN++I GY A
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELA 452
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN---- 286
L+ F M G V P++ T V +L ACS G L+ G+ E++ N+ +
Sbjct: 453 LDMFSCMCRAG-VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV---YNILPTSDHYA 508
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRD-IISWNTMINGLAMHGNTADAL 333
+IDM + +E A ++ D + W ++++ +HGN AL
Sbjct: 509 CVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 17/269 (6%)
Query: 164 DMVSARELFDKMPNRDVM-----SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
D VS +++ M + + + +L+N YA G + VF ER+V+ +N LI
Sbjct: 75 DYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALI 133
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ NG DA+E +++M G ++P+ +T ++L + D+ K VH A +G+
Sbjct: 134 SGFVVNGSPLDAMETYREMRANG-ILPDKYTFPSLLKGSDAMELSDVKK-VHGLAFKLGF 191
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFD 337
+ +VG+ L+ Y+K +E A VF+ L DR D + WN ++NG + DAL +F
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 338 QMKNSREQPDGV---TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+M RE+ GV T +LSA T G + +G + I + D+
Sbjct: 252 KM---REEGVGVSRHTITSVLSAFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
G++ L++A S M E D W S+L
Sbjct: 308 GKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 36/235 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD M ++A+WN M NGY + + +F+ M RA P + T ++++CS
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKP-DEITFVGLLQACS 479
Query: 64 KAGAVREG-------EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE- 115
+G + EG E V+ + + + C +I+M + +AY++ P
Sbjct: 480 HSGFLNEGRNFLAQMETVYNILPTS----DHYAC--VIDMLGRADKLEEAYELAISKPIC 533
Query: 116 RNVVVWTAMISAYISCGD----VGSGRRLLDLAPER--DVVMWSIVISGYIESGDMVSAR 169
N VVW +++S+ G+ + +G+RL +L PE V+ S V Y+E+G
Sbjct: 534 DNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNV---YVEAGKYEEVL 590
Query: 170 ELFDKMPNRDV-----MSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLI 218
++ D M ++V SW L NG V +F + PE ++++ W L+
Sbjct: 591 DVRDAMRQQNVKKTPGCSWIVLKNG------VHTFFTGNQTHPEFKSIHDWLSLV 639
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 32/211 (15%)
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIESAVDVFNC 307
T +A L C++ G+ +H + G+ + G +L++MYAKCG++ AV VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL---- 363
RD+ +N +I+G ++G+ DA+ + +M+ + PD TF +L M L
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 364 ------VRDGF---LYFQS-MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+ GF Y S +V YS +E A ++P
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVE----------------DAQKVFDELPDR 224
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
D+V+W +L+ E A L F + E
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 266/501 (53%), Gaps = 28/501 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +F +MP+PN +WN + +G+ S R + L M R L+ F LP ++
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFL-VRMQREGLV-LDGFALPCGLK 246
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP---ERN 117
+CS G + G+Q+HC K G + + F +ALI+MYS GS+ A VF + +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------------YIES 162
V VW +M+S ++ + + LL + D+ S +SG + S
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
+VS EL D + + L++ +AN G++ K+F +P +++ +++ LI G
Sbjct: 367 LVVVSGYEL-------DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
++G S A F++++ G + + F + +L CS L +L GK +H GY+
Sbjct: 420 KSGFNSLAFYLFRELIKLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
AL+DMY KCG I++ V +F+ + RD++SW +I G +G +A F +M N
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
+P+ VTF+G+LSAC H GL+ + ++M Y + P +EHY C+ DLLG+AGL +
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
A + KMP+EPD IWTSLL AC THKN + + + L++ P +P+ + LSN Y
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 463 LGRWQDVARLKIAMRDTGFRK 483
LG W +++++ A + G ++
Sbjct: 659 LGMWDQLSKVREAAKKLGAKE 679
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 202/450 (44%), Gaps = 57/450 (12%)
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+R C K A + GE + K+G N F+ +I MY + DA+KVF EM ERN+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 119 VVWTAMISAYISCGDVGSG----RRLLD----------------------------LAPE 146
V WT M+S Y S G RR+LD L E
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 147 R--------DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
R DVV+ + V+ Y+++G ++ A F ++ SWNTL++GY +G +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
+F MP+ NV SWN LI G+ G ALE +M EG +V + F L L ACS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREG-LVLDGFALPCGLKACS 249
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN---CLDRRDIIS 315
G L MGK +H G + + F +ALIDMY+ CG + A DVF+ +
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSM 374
WN+M++G ++ AL L Q+ S D T G L C + +R G ++ +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 375 VDHYS---IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
V Y I+ I + DL G + A ++P D + ++ L+ C
Sbjct: 370 VSGYELDYIVGSI-----LVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGF 423
Query: 432 VEIAELAFQHLIELEPKNPANFVMLSNIYK 461
+A F+ LI+L A+ ++SNI K
Sbjct: 424 NSLAFYLFRELIKLGLD--ADQFIVSNILK 451
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 204/502 (40%), Gaps = 77/502 (15%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A KVFD+M E N TW M +GY+ + L+ M + N F V++
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C G ++ G V+ K + + L ++++MY G + +A F E+ +
Sbjct: 116 ACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS 175
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W +IS Y G + L P+ +VV W+ +ISG+++ G A E +M +
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGL 234
Query: 181 M---------------------------------------SWNTLLNGYANSGDVGSFEK 201
+ + + L++ Y+N G +
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 202 VFEEMP---ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
VF + +V WN ++ G+ N AL Q + + D+ + +TL L C
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQ-IYQSDLCFDSYTLSGALKICI 353
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
L +G VH GY+ + VG+ L+D++A G I+ A +F+ L +DII+++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-----------HMGLVRDG 367
+I G G + A LF ++ D IL C+ H ++ G
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 368 F----LYFQSMVDHYSIIPQIEHYGCMADLL---------------GRAGLLDQAVSFVR 408
+ + ++VD Y +I++ + D + G+ G +++A +
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 409 KM---PMEPDAVIWTSLLGACR 427
KM +EP+ V + LL ACR
Sbjct: 534 KMINIGIEPNKVTFLGLLSACR 555
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 33/209 (15%)
Query: 247 DFTLVAV-LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
D L+A L C ++ A G+ + + G N+F+ N +I MY ++ A VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGVTFVGILSACTHMGLV 364
+ + R+I++W TM++G G A+ L+ +M +S E+ + + +L AC +G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 365 RDGFLYFQ---------------SMVDHYS---------------IIPQIEHYGCMADLL 394
+ G L ++ S+VD Y + P + +
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+AGL+D+AV+ +MP +P+ V W L+
Sbjct: 184 CKAGLMDEAVTLFHRMP-QPNVVSWNCLI 211
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 219/352 (62%), Gaps = 1/352 (0%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D + +L+ Y+ +G V KVF+EMP R++ SWNV+I ++ G + AL +K+M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
EG V + +TLVA+L +C+ + AL+MG +H A I + +FV NALIDMYAKCG +
Sbjct: 201 NEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E+A+ VFN + +RD+++WN+MI G +HG+ +A+S F +M S +P+ +TF+G+L C
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC 319
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV++G +F+ M + + P ++HYGCM DL GRAG L+ ++ + D V+
Sbjct: 320 SHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVL 379
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W +LLG+C+ H+N+E+ E+A + L++LE N ++V++++IY Q A ++ +R
Sbjct: 380 WRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRS 439
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
+ +PG S IE D V +F D+ HPE+ IY L + L GY P
Sbjct: 440 HDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKP 491
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 162/339 (47%), Gaps = 12/339 (3%)
Query: 1 MGHARKVFDKM-PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ HA+ +FD +P+T+ WN + G+S + S + ++ + M ++ + + FT +
Sbjct: 55 LSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFAL 114
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+SC + ++ + ++H + GF ++ + T+L+ YSA GSV A KVF EMP R++V
Sbjct: 115 KSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLV 174
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA--------REL 171
W MI + G + V S + + S VSA R
Sbjct: 175 SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA 234
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D V N L++ YA G + + VF M +R+V +WN +I GY +G +A+
Sbjct: 235 CDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAI 294
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALID 290
F++M+ G V PN T + +LL CS G + G + + + N+ ++D
Sbjct: 295 SFFRKMVASG-VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVD 353
Query: 291 MYAKCGVIESAVD-VFNCLDRRDIISWNTMINGLAMHGN 328
+Y + G +E++++ ++ D + W T++ +H N
Sbjct: 354 LYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRN 392
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN LI G++ + +++ + +ML+ P+ FT L +C R+ ++ +H
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
G+ + V +L+ Y+ G +E A VF+ + RD++SWN MI + G AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC---- 389
S++ +M N D T V +LS+C H+ + G + + D I C
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACD-------IRCESCVFVS 246
Query: 390 --MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ D+ + G L+ A+ M + D + W S++
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/562 (30%), Positives = 271/562 (48%), Gaps = 79/562 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + F ++ EPN+ +WNA+ G+ + L M AA ++ T ++
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+QVH K G + + + A
Sbjct: 215 DPMFCNLLKQVHAKVLKLGL-------------------------------QHEITICNA 243
Query: 124 MISAYISCGDVGSGRRLLD-LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR---- 178
MIS+Y CG V +R+ D L +D++ W+ +I+G+ + SA ELF +M
Sbjct: 244 MISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVET 303
Query: 179 DVMSWNTLLNGYANSGD------------------------------------VGSFE-- 200
D+ ++ LL+ A SG+ G+ E
Sbjct: 304 DIYTYTGLLS--ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 201 -KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+FE + +++ SWN +I G+A+ G DA++ F L ++ +D+ A+L +CS
Sbjct: 362 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSD 420
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNT 318
L L +G+ +H A G+ N FV ++LI MY+KCG+IESA F + + ++WN
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
MI G A HG +L LF QM N + D VTF IL+AC+H GL+++G M Y
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I P++EHY DLLGRAGL+++A + MP+ PD ++ + LG CR +E+A
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
HL+E+EP++ +V LS++Y DL +W++ A +K M++ G +K+PG S IE + V
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKA 660
Query: 499 FYSLDERHPETESIYRALRGLT 520
F + D +P + IY ++ LT
Sbjct: 661 FNAEDRSNPLCQDIYMMIKDLT 682
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 213/452 (47%), Gaps = 37/452 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+A +FD+MP+ ++ +WN M +GY+ D LF M R+ + ++ ++ +++
Sbjct: 51 LGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLK 109
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ GEQVH + K G++ N ++ ++L++MY+ V DA++ F E+ E N V
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD------- 173
W A+I+ ++ D+ + LL L + V +++G L D
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVT--------MDAGTFAPLLTLLDDPMFCNL 221
Query: 174 -KMPNRDVMSW---------NTLLNGYANSGDVGSFEKVFEEM-PERNVYSWNVLIGGYA 222
K + V+ N +++ YA+ G V ++VF+ + +++ SWN +I G++
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 223 RNGRFSDALEAFKQML---VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
++ A E F QM VE D+ +T +L ACS GK +H G +
Sbjct: 282 KHELKESAFELFIQMQRHWVETDI----YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 280 GNMFVGNALIDMYAK--CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
NALI MY + G +E A+ +F L +D+ISWN++I G A G + DA+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+++S + D F +L +C+ + ++ G ++ + + + +
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNEFVISSLIVMYSKC 456
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
G+++ A +++ + V W +++ H
Sbjct: 457 GIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 176/408 (43%), Gaps = 46/408 (11%)
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
HC A K G + ++ +++ Y G +G A +F EMP+R+ V W MIS Y SCG
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 134 VGSGRRLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKMPNR-----DVMSWN 184
+ L + D +S ++ G I S E + + +V +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKG-IASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
+L++ YA V + F+E+ E N SWN LI G+ + A M ++ V
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
+ T +L ++ K VH +G + + + NA+I YA CG + A V
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 305 FNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT---- 359
F+ L +D+ISWN+MI G + H A LF QM+ + D T+ G+LSAC+
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 360 -------HMGLVRDGF------------LYFQ----SMVDHYSIIPQIE-----HYGCMA 391
H +++ G +Y Q +M D S+ ++ + +
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 392 DLLGRAGLLDQAV---SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
+ GL + AV S++R ++ D +++LL +C +++ +
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 18/275 (6%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ N +L+ Y G +G +F+EMP+R+ SWN +I GY G+ DA F M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G V + ++ +L + + D+G+ VH GY+ N++VG++L+DMYAKC +
Sbjct: 94 RSGSDV-DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSREQPDGVTFVGILSA 357
E A + F + + +SWN +I G + A L M+ + D TF +L+
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 358 ------CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
C + V L + +I M G + A +
Sbjct: 213 LDDPMFCNLLKQVHAKVLKL-------GLQHEITICNAMISSYADCGSVSDAKRVFDGLG 265
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
D + W S++ H E+ E AF+ I+++
Sbjct: 266 GSKDLISWNSMIAGFSKH---ELKESAFELFIQMQ 297
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 252/486 (51%), Gaps = 46/486 (9%)
Query: 92 ALIEMYSAKGSVGDAYKVFGEMPERNVV----VWTAMISAYISCGDVGSGRRLLDLAPER 147
AL+ K ++ D +V M + + + T ++ Y C + R++LD PE+
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMPNRD---------------------------- 179
+VV W+ +IS Y ++G A +F +M D
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 180 --VMSWN---------TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
++ WN +LL+ YA +G + ++FE +PER+V S +I GYA+ G
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ALE F ++ EG + PN T ++L A S L LD GK H + + N+L
Sbjct: 237 EALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
IDMY+KCG + A +F+ + R ISWN M+ G + HG + L LF M++ R +PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMV-DHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
VT + +LS C+H + G F MV Y P EHYGC+ D+LGRAG +D+A F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+++MP +P A + SLLGACR H +V+I E + LIE+EP+N N+V+LSN+Y GRW
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
DV ++ M K PG S I+ ++ F++ D HP E + ++ +++ ++
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 527 GYVPNL 532
GYVP+L
Sbjct: 536 GYVPDL 541
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 13/311 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKV D+MPE N +W AM + YS T + + +FAEM R+ P N FT V+ SC
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCI 164
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+A + G+Q+H + K + + F+ ++L++MY+ G + +A ++F +PER+VV TA
Sbjct: 165 RASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 124 MISAYISCG----DVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVSARELFDK 174
+I+ Y G + RL + V ++ +++ ++ G L +
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+P V+ N+L++ Y+ G++ ++F+ MPER SWN ++ GY+++G + LE F
Sbjct: 285 LPFYAVLQ-NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALIDMY 292
+ M E V P+ TL+AVL CS D G + + A G K ++DM
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 403
Query: 293 AKCGVIESAVD 303
+ G I+ A +
Sbjct: 404 GRAGRIDEAFE 414
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 138/308 (44%), Gaps = 20/308 (6%)
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
+ F P V + I NGR +AL + E D A+L AC
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYD----ALLNACL 63
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
AL G+ VH + Y ++ L+ Y KC +E A V + + ++++SW
Sbjct: 64 DKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC---THMGLVRDGFLYFQSMV 375
MI+ + G++++AL++F +M S +P+ TF +L++C + +GL + ++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ----IHGLI 179
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
++ I + D+ +AG + +A +P E D V T+++ + + +
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLD 235
Query: 436 ELAFQ--HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
E A + H + E +P N+V +++ L + K A R+LP +V++
Sbjct: 236 EEALEMFHRLHSEGMSP-NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ-- 292
Query: 494 DSVVEFYS 501
+S+++ YS
Sbjct: 293 NSLIDMYS 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR++FD MPE +WNAM GYS R+V+ LF M + TL V+
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 61 SCSKAGAVREGEQVH--CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
CS G + VA + G K + +++M G + +A++ MP +
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Query: 119 V-VWTAMISA---YISCGDVGS--GRRLLDLAPERDVVMWSIVISGYIESG---DMVSAR 169
V +++ A ++S D+G GRRL+++ PE + + I+ + Y +G D+ + R
Sbjct: 425 AGVLGSLLGACRVHLSV-DIGESVGRRLIEIEPE-NAGNYVILSNLYASAGRWADVNNVR 482
Query: 170 ELF-----DKMPNRD-VMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
+ K P R + TL +AN E+V +M E ++
Sbjct: 483 AMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 530
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 249/482 (51%), Gaps = 41/482 (8%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
+ MYS G A V+G M ++N + +I+ Y+ GD+ + R++ D P+R + W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 154 IVISGYIESGDMVSARELFDKM------PNR----------------------------- 178
+I+G I+ LF +M P+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 179 ----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
D++ ++L + Y +G + E V MP RN+ +WN LI G A+NG L +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K M + G PN T V VL +CS L G+ +H A IG + V ++LI MY+K
Sbjct: 181 KMMKISG-CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVG 353
CG + A F+ + D + W++MI+ HG +A+ LF+ M + + + + V F+
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H GL G F MV+ Y P ++HY C+ DLLGRAG LDQA + +R MP++
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
D VIW +LL AC HKN E+A+ F+ +++++P + A +V+L+N++ RW+DV+ ++
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLV 533
+MRD +K G S E V +F D +++ IY L+ LT+ ++L GY P+
Sbjct: 420 KSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTA 479
Query: 534 DV 535
V
Sbjct: 480 SV 481
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 166/348 (47%), Gaps = 13/348 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARKVFD+MP+ TWNAM G E + + + LF EM+ +P + +TL V
Sbjct: 43 NARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSP-DEYTLGSVFSGS 101
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ +V G+Q+H K G + + + ++L MY G + D V MP RN+V W
Sbjct: 102 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 161
Query: 123 AMI--SAYISCGD-VGSGRRLLDLAPER-DVVMWSIVISGYIE-----SGDMVSARELFD 173
+I +A C + V +++ ++ R + + + V+S + G + A E
Sbjct: 162 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA-EAIK 220
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ V ++L++ Y+ G +G K F E + + W+ +I Y +G+ +A+E
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMY 292
F M + ++ N+ + +L ACS G D G + + E G+K + ++D+
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL 340
Query: 293 AKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQM 339
+ G ++ A + + + DI+ W T+++ +H N A +F ++
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
V MP N WN + G + V+ L+ M + P N T V+ SCS
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRP-NKITFVTVLSSCSDLA 206
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+G+Q+H A K G + ++LI MYS G +GDA K F E + + V+W++MIS
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 127 AYISCGDVGSGRRLLDLAPER-----DVVMWSIVISGYIESGDMVSARELFDKMPNR--- 178
AY G L + E+ + V + ++ SG ELFD M +
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 179 --DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ + +++ +G + E + MP + ++ W L+ + A FK
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 236 QMLVEGDVVPNDFTLVAVLLA 256
++L + PND + VLLA
Sbjct: 387 EIL---QIDPND-SACYVLLA 403
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 270/540 (50%), Gaps = 34/540 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF +P + +W+++ G+S + + EM N + ++
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS G Q+H + K N+ +L +MY+ G + A +VF ++ +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN--- 177
W +I+ + G A E V + SG+I D +S R L
Sbjct: 339 WNVIIAGLANNG----------YADEAVSVFSQMRSSGFIP--DAISLRSLLCAQTKPMA 386
Query: 178 -----------------RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIG 219
D+ N+LL Y D+ +FE+ + SWN ++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
++ + + L FK MLV + P+ T+ +L C + +L +G VH Y+ G
Sbjct: 447 ACLQHEQPVEMLRLFKLMLV-SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
F+ N LIDMYAKCG + A +F+ +D RD++SW+T+I G A G +AL LF +M
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
K++ +P+ VTFVG+L+AC+H+GLV +G + +M + I P EH C+ DLL RAG
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
L++A F+ +M +EPD V+W +LL AC+T NV +A+ A +++++++P N V+L ++
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSM 685
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
+ G W++ A L+ +M+ +K+PG S IE D + F++ D HPE + IY L +
Sbjct: 686 HASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 211/450 (46%), Gaps = 35/450 (7%)
Query: 20 NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
N N + +R+ + F + ++ + T ++ +CS + ++ +G ++H
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRR 139
K+++ L ++ MY GS+ DA +VF MPERN+V +T++I+ Y G R
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 140 LL------DLAPERDVVMWSIVISGYIESGDMVSARELFDKM----PNRDVMSWNTLLNG 189
L DL P D + +I S D+ ++L ++ + +++ N L+
Sbjct: 155 LYLKMLQEDLVP--DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y + +VF +P +++ SW+ +I G+++ G +AL K+ML G PN++
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+ L ACS L D G +H GN G +L DMYA+CG + SA VF+ ++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH-MGLVRDGF 368
R D SWN +I GLA +G +A+S+F QM++S PD ++ +L A T M L
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS---- 388
Query: 369 LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ---------AVSFVRKMPMEPDAVIW 419
Q M H II +G +ADL LL + D+V W
Sbjct: 389 ---QGMQIHSYIIK----WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 420 TSLLGACRTHKN-VEIAELAFQHLI-ELEP 447
++L AC H+ VE+ L L+ E EP
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 24/435 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD MPE N ++ ++ GYS + + L+ +M + P + F ++++C+
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP-DQFAFGSIIKACA 179
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ V G+Q+H K + ALI MY + DA +VF +P ++++ W++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 124 MISAYISCG----DVGSGRRLLDLA---PERDVVMWSIVISGYI---ESGDMVSARELFD 173
+I+ + G + + +L P + S+ + + G + +
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
++ + ++ +L + YA G + S +VF+++ + SWNV+I G A NG +A+
Sbjct: 300 ELAG-NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F QM G +P+ +L ++L A ++ AL G +H Y G+ ++ V N+L+ MY
Sbjct: 359 FSQMRSSG-FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYT 417
Query: 294 KCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
C + ++F + + D +SWNT++ H + L LF M S +PD +T
Sbjct: 418 FCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMG 477
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYS----IIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+L C + ++ G S V YS + P+ + D+ + G L QA
Sbjct: 478 NLLRGCVEISSLKLG-----SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Query: 409 KMPMEPDAVIWTSLL 423
M D V W++L+
Sbjct: 533 SMD-NRDVVSWSTLI 546
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 264/494 (53%), Gaps = 27/494 (5%)
Query: 52 HFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF----LCTALIEMYSAKGSVGDAY 107
H + ++ + + V++ + H + G N++ L TA + + + A
Sbjct: 8 HQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYAS 67
Query: 108 KVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL---------DLAPERDVVMWSIVI-- 156
+F + N V+ MI G R D+AP + IV
Sbjct: 68 SIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACL 127
Query: 157 -SGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+ + G + + + + D +L Y + KVF+E+P+ +V W+
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWD 187
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
VL+ GY R G S+ LE F++MLV+G + P++F++ L AC+++GAL GKW+H + +
Sbjct: 188 VLMNGYVRCGLGSEGLEVFREMLVKG-LEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 276 IGY-KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ + ++FVG AL+DMYAKCG IE+AV+VF L RR++ SW +I G A +G A++
Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMT 306
Query: 335 LFDQMKNSRE---QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
++++ RE +PD V +G+L+AC H G + +G ++M Y I P+ EHY C+
Sbjct: 307 CLERLE--REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIV 364
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKN-- 449
DL+ RAG LD A++ + KMPM+P A +W +LL CRTHKNVE+ ELA ++L++LE N
Sbjct: 365 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVE 424
Query: 450 --PANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
A V LSNIY + R + ++++ + G RK PG SV+E + +V +F S D HP
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHP 484
Query: 508 ETESIYRALRGLTM 521
I+ + L++
Sbjct: 485 NLLQIHTVIHLLSV 498
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 166/344 (48%), Gaps = 20/344 (5%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLT-ESHRDV--VVLFAEMNRAAAAPLNHFTLPIVV 59
+A +FD + PN+ ++ M S + + H + +L + AP ++ T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAP-SYLTFHFLI 123
Query: 60 RSCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+C KA G+Q+HC K G F +S + T ++ +Y + DA KVF E+P+ +V
Sbjct: 124 VACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDV 183
Query: 119 VVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
V W +++ Y+ CG G R +L E D + ++ + G + + + +
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ + DV L++ YA G + + +VF+++ RNV+SW LIGGYA G
Sbjct: 244 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES---IGYKGNMFVGN 286
A+ +++ E + P+ L+ VL AC+ G L+ G+ + E+ I K + +
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY--S 361
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNT 329
++D+ + G ++ A+++ + + + S W ++NG H N
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 256/542 (47%), Gaps = 47/542 (8%)
Query: 1 MGHARKVFDKMP-EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ A +F+ M E N TW +M GYS + F ++ R N +T P V+
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS-NQYTFPSVL 234
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C+ A R G QVHC K GFK N ++ +ALI+MY+ + A + M +VV
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDV-----VMWSIVISGYIESGDMVSARELFDK 174
W +MI + G +G + ERD+ + SI+ + +M A
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 175 MPNRDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ ++ N L++ YA G + S KVFE M E++V SW L+ G NG + +A
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEA 414
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L+ F M V G + P+ +VL A + L L+ G+ VH G+ ++ V N+L+
Sbjct: 415 LKLFCNMRV-GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVT 473
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY KCG +E A +FN ++ RD+I+W +I G A +G DA FD M+
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTV-------- 525
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
Y I P EHY CM DL GR+G + + +M
Sbjct: 526 ---------------------------YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
+EPDA +W ++L A R H N+E E A + L+ELEP N +V LSN+Y GR + A
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAA 618
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
++ M+ K PGCS +E V F S D RHP IY + + +L++ GY
Sbjct: 619 NVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFA 678
Query: 531 NL 532
++
Sbjct: 679 DM 680
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 66/378 (17%)
Query: 98 SAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS 157
S G V +A ++F +MPER+ W MI AY + + +L P ++ + W+ +IS
Sbjct: 39 SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALIS 98
Query: 158 GYIESGDMVSARELFDKM------PNR--------------------------------- 178
GY +SG V A LF +M PN
Sbjct: 99 GYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL 158
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
DV N LL YA + E +FE M E+N +W ++ GY++NG A+E F+ +
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
EG+ N +T +VL AC+ + A +G VH G+K N++V +ALIDMYAKC
Sbjct: 219 RREGNQ-SNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL-- 355
+ESA + ++ D++SWN+MI G G +ALS+F +M + D T IL
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 356 ----------SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
++ H +V+ G+ ++ +V++ + D+ + G++D A+
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYK-LVNN-----------ALVDMYAKRGIMDSALK 385
Query: 406 FVRKMPMEPDAVIWTSLL 423
M +E D + WT+L+
Sbjct: 386 VFEGM-IEKDVISWTALV 402
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 146/282 (51%), Gaps = 4/282 (1%)
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
+R + ++++ +SG + AR++FDKMP RD +WNT++ Y+NS + EK+F
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
P +N SWN LI GY ++G +A F +M +G + PN++TL +VL C+ L L
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDG-IKPNEYTLGSVLRMCTSLVLLLR 143
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLA 324
G+ +H + G+ ++ V N L+ MYA+C I A +F ++ ++ ++W +M+ G +
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+G A+ F ++ Q + TF +L+AC + R G +V I
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNI 262
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ D+ + ++ A + + M ++ D V W S++ C
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 207/329 (62%), Gaps = 11/329 (3%)
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
KVF+E+P+ +V W+VL+ GY R G S+ LE FK+MLV G + P++F++ L AC+++
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEFSVTTALTACAQV 231
Query: 261 GALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
GAL GKW+H + + + + ++FVG AL+DMYAKCG IE+AV+VF L RR++ SW +
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 320 INGLAMHGNTADALSLFDQMKNSRE---QPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
I G A +G A + D+++ RE +PD V +G+L+AC H G + +G ++M
Sbjct: 292 IGGYAAYGYAKKATTCLDRIE--REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
Y I P+ EHY C+ DL+ RAG LD A+ + KMPM+P A +W +LL CRTHKNVE+ E
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 437 LAFQHLIELEPKN----PANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIEC 492
LA Q+L++LE N A V LSNIY + R + +++ + G RK PG S++E
Sbjct: 410 LAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
Query: 493 NDSVVEFYSLDERHPETESIYRALRGLTM 521
+ V +F S D HP I+ + L++
Sbjct: 470 DGIVTKFVSGDVSHPNLLQIHTLIHLLSV 498
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 158/340 (46%), Gaps = 14/340 (4%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIVVR 60
+A +FD + PN+ ++ M S + + F M + + ++ T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 61 SCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C KA G+Q+HC K G F + + T ++ +Y + DA KVF E+P+ +VV
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 120 VWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
W +++ Y+ CG G + +L E D + ++ + G + + + + +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 176 PNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ DV L++ YA G + + +VFE++ RNV+SW LIGGYA G A
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES-IGYKGNMFVGNALI 289
++ E + P+ L+ VL AC+ G L+ G+ + E+ G + ++
Sbjct: 305 TTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIV 364
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGN 328
D+ + G ++ A+D+ + + + S W ++NG H N
Sbjct: 365 DLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKN 404
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 113/258 (43%), Gaps = 4/258 (1%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG--DVVPNDFTLVAVLLACSR 259
+F+ + N + ++ +I +R+ + L F M+ E D+ P+ T +++AC +
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 260 LGALDMGKWVHVYAESIG-YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+GK +H + G + + V ++ +Y + ++ A VF+ + + D++ W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
++NG G ++ L +F +M +PD + L+AC +G + G + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I + + D+ + G ++ AV K+ + W +L+G + + A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR-NVFSWAALIGGYAAYGYAKKATTC 307
Query: 439 FQHLIELEPKNPANFVML 456
+ + P + V+L
Sbjct: 308 LDRIEREDGIKPDSVVLL 325
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 278/560 (49%), Gaps = 51/560 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR+VFD MPE N +W A+ GY + ++ LF+ M + P N FTL V+ SC
Sbjct: 114 YARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFP-NEFTLSSVLTSC 171
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSA---KGSVGDAYKVFGEMPERNVV 119
G+QVH +A K G + ++ A+I MY + +A+ VF + +N+V
Sbjct: 172 R----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 120 VWTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
W +MI+A+ C +G R+ D + S +S D+V
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLV--------- 278
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFE------KVFEEMPE---------------RNVYSW 214
PN L + SG V E KV+ EM E R++ +W
Sbjct: 279 PNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAW 338
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
N +I +A A+ F Q+ E + P+ +T +VL AC+ L +H
Sbjct: 339 NGIITAFAVYDP-ERAIHLFGQLRQE-KLSPDWYTFSSVLKACAGLVTARHALSIHAQVI 396
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
G+ + + N+LI YAKCG ++ + VF+ +D RD++SWN+M+ ++HG L
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILP 456
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+F +M + PD TF+ +LSAC+H G V +G F+SM + +PQ+ HY C+ D+L
Sbjct: 457 VFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDML 513
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL-EPKNPANF 453
RA +A +++MPM+PDAV+W +LLG+CR H N + +LA L EL EP N ++
Sbjct: 514 SRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSY 573
Query: 454 VMLSNIYKDLGRWQDVARLKIAMRDT-GFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
+ +SNIY G + + A L I +T RK P S E + V EF S P+ E++
Sbjct: 574 IQMSNIYNAEGSFNE-ANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAV 632
Query: 513 YRALRGLTMLLRLHGYVPNL 532
YR L+ L L+ GYVP +
Sbjct: 633 YRELKRLISWLKEMGYVPEM 652
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 200/481 (41%), Gaps = 74/481 (15%)
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H ++ + N L LI MY+ G++ A +VF MPERNVV WTA+I+ Y+ G+
Sbjct: 84 HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE 143
Query: 135 GSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGY 190
G +L + + S++ S E G V L + + + N +++ Y
Sbjct: 144 QEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGL-HCSIYVANAVISMY 202
Query: 191 ANSGD-VGSFE--KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG------ 241
D ++E VFE + +N+ +WN +I + A+ F +M +G
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA 262
Query: 242 -------------DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
D+VPN+ V C +L +L + + E V AL
Sbjct: 263 TLLNICSSLYKSSDLVPNE-----VSKCCLQLHSLTVKSGLVTQTE---------VATAL 308
Query: 289 IDMYAKCGVIESAVDVFNCLDR----RDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
I +Y++ ++E D + RDI++WN +I A++ + A+ LF Q++ +
Sbjct: 309 IKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKL 365
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL---------G 395
PD TF +L AC + R SI Q+ G +AD +
Sbjct: 366 SPDWYTFSSVLKACAGLVTARHAL----------SIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
+ G LD + M D V W S+L A H V+ FQ + ++ P + A F+
Sbjct: 416 KCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVDSILPVFQKM-DINP-DSATFIA 472
Query: 456 LSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRA 515
L + GR ++ R+ +M + LP + C V++ S ER E E + +
Sbjct: 473 LLSACSHAGRVEEGLRIFRSMFEKP-ETLPQLNHYAC---VIDMLSRAERFAEAEEVIKQ 528
Query: 516 L 516
+
Sbjct: 529 M 529
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 267/537 (49%), Gaps = 13/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+MP + + N +F G+ VL M + +H TL IV+ C
Sbjct: 109 AIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--LGSGGFDHATLTIVLSVCD 166
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ +H +A G+ + LI Y G VF M RNV+ TA
Sbjct: 167 TPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTA 226
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNRD 179
+IS I G RL L V V + ++ S +V +++ +
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 180 VMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ S + L++ Y+ G + +FE E + S V++ G A+NG +A++ F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRL-GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+ML G V D +V+ +L S + +L +GK +H + GN FV N LI+MY+K
Sbjct: 347 RMLQAG--VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 404
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG + + VF + +R+ +SWN+MI A HG+ AL L+++M +P VTF+ +
Sbjct: 405 CGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 464
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L AC+H+GL+ G M + + I P+ EHY C+ D+LGRAGLL +A SF+ +P++P
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 524
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D IW +LLGAC H + E+ E A + L + P + + ++++NIY G+W++ A+
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
M+ G K G S IE F D+ HP+ E+IY L GL ++ GY P+
Sbjct: 585 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 26/388 (6%)
Query: 85 WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG----RRL 140
WNS L+ +Y+ G + DA K+F EMP R+V+ + ++ + SG +R+
Sbjct: 93 WNS-----LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM 147
Query: 141 LDLAPERDVVMWSIVIS-----GYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
L + D +IV+S + M+ A + ++++ N L+ Y G
Sbjct: 148 LG-SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGY-DKEISVGNKLITSYFKCGC 205
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
S VF+ M RNV + +I G N D L F ++ G V PN T ++ L
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALA 264
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
ACS + G+ +H G + + + +AL+DMY+KCG IE A +F D +S
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC---THMGLVRDGFLYFQ 372
++ GLA +G+ +A+ F +M + + D +L +GL +
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQ----LH 380
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
S+V + ++ + G L + + R+MP + + V W S++ A H +
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHG 439
Query: 433 EIAELAFQHLIELEPKNPANFVMLSNIY 460
A ++ + LE K P + LS ++
Sbjct: 440 LAALKLYEEMTTLEVK-PTDVTFLSLLH 466
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 16/338 (4%)
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN+LL+ YA G + K+F+EMP R+V S N++ G+ RN K+ML G
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ TL VL C + K +H A GY + VGN LI Y KCG S
Sbjct: 153 F--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ + R++I+ +I+GL + D L LF M+ P+ VT++ L+AC+
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ +G +++ Y I ++ + D+ + G ++ A + + + E D V T +
Sbjct: 271 RIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWT-IFESTTEVDEVSMTVI 328
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVM----LSNIYKDLGRWQDVARLKIAMRD 478
L + + E A F +++ + AN V +S I LG + + L I
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK--- 385
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
RK G + + N+ ++ YS ++++++R +
Sbjct: 386 ---RKFSGNTFV--NNGLINMYSKCGDLTDSQTVFRRM 418
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 212/357 (59%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
DV N+L+N Y G++ VFE++ + SW+ ++ A G +S+ L F+ M
Sbjct: 166 DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMC 225
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
E ++ + +V+ LLAC+ GAL++G +H + + N+ V +L+DMY KCG +
Sbjct: 226 SETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ A+ +F +++R+ ++++ MI+GLA+HG AL +F +M +PD V +V +L+AC
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV++G F M+ + P EHYGC+ DLLGRAGLL++A+ ++ +P+E + VI
Sbjct: 346 SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI 405
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W + L CR +N+E+ ++A Q L++L NP +++++SN+Y W DVAR + +
Sbjct: 406 WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAI 465
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
G ++ PG S++E F S D HP+ + IY+ L + L+ GY P+L +
Sbjct: 466 KGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQI 522
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 166/344 (48%), Gaps = 23/344 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A +F + +P T +N M GY S + + + EM + P N FT P +++
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDN-FTYPCLLK 140
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ ++REG+Q+H K G + + F+ +LI MY G + + VF ++ +
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 121 WTAMISAYISCGDVGSGRRLL-------DLAPERDVVMWSIVI---SGYIESGDMVSARE 170
W++M+SA G L +L E ++ +++ +G + G +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF- 259
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
L + +++ +L++ Y G + +F++M +RN +++ +I G A +G A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG----N 286
L F +M+ EG + P+ V+VL ACS G + G+ V+AE + +G +
Sbjct: 320 LRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGR--RVFAEMLK-EGKVEPTAEHYG 375
Query: 287 ALIDMYAKCGVIESAVDVFNC--LDRRDIISWNTMINGLAMHGN 328
L+D+ + G++E A++ +++ D+I W T ++ + N
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLSQCRVRQN 418
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 138/270 (51%), Gaps = 22/270 (8%)
Query: 188 NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND 247
+G+ NS + + +F + + + +N +I GY F +AL + +M+ G+ P++
Sbjct: 76 SGWENSMNYAA--SIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE-PDN 132
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
FT +L AC+RL ++ GK +H +G + ++FV N+LI+MY +CG +E + VF
Sbjct: 133 FTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEK 192
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQM---KNSREQPDGVTFVGILSACT----- 359
L+ + SW++M++ A G ++ L LF M N + + G+ V L AC
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM--VSALLACANTGAL 250
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
++G+ GFL + +II Q + D+ + G LD+A+ +KM + + + +
Sbjct: 251 NLGMSIHGFLLRN--ISELNIIVQTS----LVDMYVKCGCLDKALHIFQKME-KRNNLTY 303
Query: 420 TSLLGACRTHKNVEIAELAFQHLIE--LEP 447
++++ H E A F +I+ LEP
Sbjct: 304 SAMISGLALHGEGESALRMFSKMIKEGLEP 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 36/266 (13%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF+K+ A+W++M + + + ++LF M + + +C+ G
Sbjct: 189 VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
A+ G +H + + N + T+L++MY G + A +F +M +RN + ++AMIS
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMIS 308
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
G+ S R M+S +I +E +V + ++
Sbjct: 309 GLALHGEGESALR-----------MFSKMIKEGLEPDHVV----------------YVSV 341
Query: 187 LNGYANSGDVGSFEKVFEEM-----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
LN ++SG V +VF EM E + L+ R G +ALE + + +E
Sbjct: 342 LNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIE- 400
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGK 267
ND L C +++G+
Sbjct: 401 ---KNDVIWRTFLSQCRVRQNIELGQ 423
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 291/558 (52%), Gaps = 74/558 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++F+ MPE + T N++ +GY L + + LF E+N +A A TL V+++C+
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADA----ITLTTVLKACA 198
Query: 64 KAGAVREGEQVHC-------------------VAAKRG-FKWNSFLC-----------TA 92
+ A++ G+Q+H V AK G + S++ +A
Sbjct: 199 ELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSA 258
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS---------------------- 130
LI Y+ G V ++ +F R V++W +MIS YI+
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDS 318
Query: 131 ---------CGDVG---SGRRLLDLAPE----RDVVMWSIVISGYIESGDMVSARELFDK 174
C +G +G+++ A + D+V+ S ++ Y + G + A +LF +
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + D + N+++ Y + G + ++VFE + +++ SWN + G+++NG + LE F
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYF 438
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
QM + D+ ++ +L +V+ AC+ + +L++G+ V A +G + V ++LID+Y K
Sbjct: 439 HQMH-KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCK 497
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E VF+ + + D + WN+MI+G A +G +A+ LF +M + +P +TF+ +
Sbjct: 498 CGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVV 557
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+AC + GLV +G F+SM + +P EH+ CM DLL RAG +++A++ V +MP +
Sbjct: 558 LTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDV 617
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D +W+S+L C + + + A + +IELEP+N +V LS I+ G W+ A ++
Sbjct: 618 DGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRK 677
Query: 475 AMRDTGFRKLPGCSVIEC 492
MR+ K PG S +C
Sbjct: 678 LMRENNVTKNPGSSWTDC 695
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 197/421 (46%), Gaps = 78/421 (18%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTA--LIEMYSAKGSVGDAYKVFGEMPE 115
+++SCS Q + + K+GF +S + A L++MYS G +G A +F EMP+
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGF-LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD 90
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
RN W MI Y++ G+ G+ R D+ PERD W++V+SG+ ++G++ AR LF+ M
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAM 150
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
P +DV++ N+LL+GY ++ GYA +AL FK
Sbjct: 151 PEKDVVTLNSLLHGY--------------------------ILNGYAE-----EALRLFK 179
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
++ D + TL VL AC+ L AL GK +H G + + + ++L+++YAKC
Sbjct: 180 ELNFSADAI----TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC 235
Query: 296 GVIESAVDVF-------------------NC---------LDR---RDIISWNTMINGLA 324
G + A + NC DR R +I WN+MI+G
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH---YSII 381
+ +AL LF++M+N + D T +++AC +G + G + M H + +I
Sbjct: 296 ANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETG----KQMHCHACKFGLI 350
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
I + D+ + G +A ++ D ++ S++ + ++ A+ F+
Sbjct: 351 DDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 442 L 442
+
Sbjct: 410 I 410
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 44/371 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +R +FD+ WN+M +GY + +VLF EM + TL V+
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE--DSRTLAAVIN 326
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C G + G+Q+HC A K G + + + L++MYS GS +A K+F E+ + ++
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
+MI Y SCG + +R+ + + ++ W+ + +G+ ++G V E F +M D+
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 181 MS---------------------------------------WNTLLNGYANSGDVGSFEK 201
+ ++L++ Y G V +
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF+ M + + WN +I GYA NG+ +A++ FK+M V G + P T + VL AC+ G
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG-IRPTQITFMVVLTACNYCG 565
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
++ G K G+ + + ++D+ A+ G +E A+++ + D W+++
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625
Query: 320 INGLAMHGNTA 330
+ G +G A
Sbjct: 626 LRGCVANGYKA 636
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 200/326 (61%), Gaps = 3/326 (0%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
DV ++L+ Y +SG+V + KVFEEMPERNV SW +I G+A+ R L+ + +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+ PND+T A+L AC+ GAL G+ VH +G K + + N+LI MY KCG +
Sbjct: 214 -KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD-QMKNSREQPDGVTFVGILSA 357
+ A +F+ +D++SWN+MI G A HG A+ LF+ M S +PD +T++G+LS+
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C H GLV++G +F M +H + P++ HY C+ DLLGR GLL +A+ + MPM+P++V
Sbjct: 333 CRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
IW SLL +CR H +V A + + LEP A V L+N+Y +G W++ A ++ M+
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLD 503
D G + PGCS IE N+ V F + D
Sbjct: 452 DKGLKTNPGCSWIEINNYVFMFKAED 477
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 73/317 (23%)
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
+ L VRSC R G HC+A K GF + +L ++L+ +Y G V +AYKVF E
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 113 MPERNVVVWTAMISAY-----------------------------------ISCGDVGSG 137
MPERNVV WTAMIS + G +G G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 138 R----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANS 193
R + L + + + + + +IS Y + GD+ A +FD+ N+DV+SWN+++
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI------ 294
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
GYA++G A+E F+ M+ + P+ T + V
Sbjct: 295 -------------------------AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 254 LLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR- 311
L +C G + G K+ ++ AE G K + + L+D+ + G+++ A+++ + +
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 312 DIISWNTMINGLAMHGN 328
+ + W +++ +HG+
Sbjct: 389 NSVIWGSLLFSCRVHGD 405
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVVRS 61
+A KVF++MPE N +W AM +G++ E D+ + L+++M ++ + P N +T ++ +
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFA-QEWRVDICLKLYSKMRKSTSDP-NDYTFTALLSA 230
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C+ +GA+ +G VHC G K + +LI MY G + DA+++F + ++VV W
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 122 TAMISAYISCGDVGSGRRLLDL-----APERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+MI+ Y G L +L + D + + V+S +G + R+ F+ M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+ PE N YS L+ R G +ALE +
Sbjct: 351 EHGL-------------------------KPELNHYS--CLVDLLGRFGLLQEALELIEN 383
Query: 237 MLVEGDVVPNDFTLVAVLLAC 257
M ++ PN ++L +C
Sbjct: 384 MPMK----PNSVIWGSLLFSC 400
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
+ L + + +C G H A G+ ++++G++L+ +Y G +E+A VF
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-------- 359
+ R+++SW MI+G A L L+ +M+ S P+ TF +LSACT
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 360 --------HMGLVRDGFLYFQS-----------MVDHYSIIPQIEH-----YGCMADLLG 395
HMGL +L+ + + D + I Q + + M
Sbjct: 241 RSVHCQTLHMGL--KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 396 RAGLLDQAVS-FVRKMP---MEPDAVIWTSLLGACR 427
+ GL QA+ F MP +PDA+ + +L +CR
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 276/578 (47%), Gaps = 49/578 (8%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+FD++P+ + A+WN + + LF EMNR ++ FTL ++ SC+ +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G ++H A + G + ALI YS + ++ M ++ V +T MI
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNT 185
+AY+S G V S + E++ + ++ +++G+ +G + A +LF M R V +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 186 LLNGYANSGDVGSFEKVFEEM-------------------------------PERNVYSW 214
L ++ + S +KV E++ E W
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 215 ----------NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
+IGGYARNG A+ F + L E + ++ +L +L C LG +
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
MG +H YA GY ++ +GN+LI MYAKC + A+ +FN + D+ISWN++I+
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI 598
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSA-----CTHMGLVRDGFLYFQSMVDHYS 379
+ N +AL+L+ +M +PD +T ++SA + RD FL SM Y
Sbjct: 599 LQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFL---SMKTIYD 655
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I P EHY +LG GLL++A + MP++P+ + +LL +CR H N +A+
Sbjct: 656 IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVA 715
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+ ++ +P+ P+ +++ SNIY G W ++ MR+ G+RK P S I + + F
Sbjct: 716 KLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSF 775
Query: 500 YSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
++ D HP+ + IYR L L M GY PN V Q
Sbjct: 776 HARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQ 813
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 228/552 (41%), Gaps = 74/552 (13%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF + P ++ A+ +G+S + + +F M +A N +T ++ +C +
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMY--SAKGSVGDAYKVFGEMPERNVVVWTAM 124
G Q+H + K GF + F+ +L+ +Y + S D K+F E+P+R+V W +
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTV 255
Query: 125 ISAYI---------------------------------SCGDVG---SGR----RLLDLA 144
+S+ + SC D GR R + +
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIG 315
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
+++ + + +I Y + DM L++ M +D +++ ++ Y + G V S ++F
Sbjct: 316 LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFA 375
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
+ E+N ++N L+ G+ RNG AL+ F ML G V DF+L + + AC +
Sbjct: 376 NVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG-VELTDFSLTSAVDACGLVSEKK 434
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC----LDRRDIISWNTMI 320
+ + +H + G N + AL+DM +C + A ++F+ LD + ++I
Sbjct: 435 VSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK--ATTSII 492
Query: 321 NGLAMHGNTADALSLFDQ-MKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSMVDHY 378
G A +G A+SLF + + + D V+ IL+ C +G G+ ++ ++ Y
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I + + + D A+ M E D + W SL+ +N + A
Sbjct: 553 --FSDISLGNSLISMYAKCCDSDDAIKIFNTM-REHDVISWNSLISCYILQRNGDEALAL 609
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
+ + E E K D+ L + + + FR + C D +
Sbjct: 610 WSRMNEKEIK------------------PDIITLTLVI--SAFRYTESNKLSSCRDLFLS 649
Query: 499 FYSLDERHPETE 510
++ + P TE
Sbjct: 650 MKTIYDIEPTTE 661
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F K+ N L++ Y G VF + V S+ LI G++R +AL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F +M G V PN++T VA+L AC R+ +G +H G+ ++FV N+L+ +
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 292 YAK--CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE--QPD 347
Y K + + +F+ + +RD+ SWNT+++ L G + A LF +M N E D
Sbjct: 226 YDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM-NRVEGFGVD 284
Query: 348 GVTFVGILSACTHMGLVRDG 367
T +LS+CT ++ G
Sbjct: 285 SFTLSTLLSSCTDSSVLLRG 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 149/354 (42%), Gaps = 37/354 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F + E NT T+NA+ G+ + LF +M + L F+L V +C
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV-ELTDFSLTSAVDACG 428
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--NVVVW 121
+ EQ+H K G +N + TAL++M + + DA ++F + P +
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT 488
Query: 122 TAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVIS-----GYIESGDMVSAREL 171
T++I Y G R L + D V +++++ G+ E G + L
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL 548
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY--ARNGRFSD 229
+ D+ N+L++ YA D K+F M E +V SWN LI Y RNG +
Sbjct: 549 KAGYFS-DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG--DE 605
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVL----------LACSRLGALDMGKWVHVYAESIGYK 279
AL + +M E ++ P+ TL V+ L+ R L M + + Y
Sbjct: 606 ALALWSRM-NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHY- 663
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNTADA 332
A + + G++E A D N + + +S +++ +H NT+ A
Sbjct: 664 ------TAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVA 711
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 1 MGHARKVFDKMPE--PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
M A ++FD+ P ++ ++ GY+ V LF L+ +L ++
Sbjct: 468 MADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLI 527
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ C G G Q+HC A K G+ + L +LI MY+ DA K+F M E +V
Sbjct: 528 LAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDV 587
Query: 119 VVWTAMISAYI--SCGD--VGSGRRLLDLAPERDVVMWSIVISG--YIESGDMVSARELF 172
+ W ++IS YI GD + R+ + + D++ ++VIS Y ES + S R+LF
Sbjct: 588 ISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLF 647
Query: 173 DKM 175
M
Sbjct: 648 LSM 650
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 255/481 (53%), Gaps = 25/481 (5%)
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE------RNVVVW 121
V++ +QVH G+ + L T LI + + ++ + +F +P +V+
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
T+ + + C V RR+L +V + + I+S +SA + + V+
Sbjct: 82 TSKLRLPLHC--VAYYRRMLS----SNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV 135
Query: 182 S--------WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
S L+ Y+ GD+ +VF+ MPE+++ +WN L+ G+ +NG +A++
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F QM E P+ T V++L AC++ GA+ +G WVH Y S G N+ +G ALI++Y+
Sbjct: 196 FYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYS 254
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS-REQPDGVTFV 352
+CG + A +VF+ + ++ +W MI+ HG A+ LF++M++ P+ VTFV
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+LSAC H GLV +G ++ M Y +IP +EH+ CM D+LGRAG LD+A F+ ++
Sbjct: 315 AVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDA 374
Query: 413 EPDAV---IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
A +WT++LGAC+ H+N ++ + LI LEP NP + VMLSNIY G+ +V
Sbjct: 375 TGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEV 434
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+ ++ M RK G SVIE + F DE H ET IYR L L + GY
Sbjct: 435 SHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYA 494
Query: 530 P 530
P
Sbjct: 495 P 495
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 160/355 (45%), Gaps = 42/355 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ + +F +P P+ +N++ S V + M + +P N +T V++
Sbjct: 57 IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSN-YTFTSVIK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ A+R G+ VHC A GF ++++ AL+ YS G + A +VF MPE+++V
Sbjct: 116 SCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA 175
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY-IESGDMVSARELFDKMPNRD 179
W +++S + G LA E V + + SG+ +S VS +
Sbjct: 176 WNSLVSGFEQNG----------LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS 225
Query: 180 VMSW-----------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
+ SW L+N Y+ GDVG +VF++M E NV +W +I Y
Sbjct: 226 LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-----VYAESIG 277
+G A+E F +M + +PN+ T VAVL AC+ G ++ G+ V+ Y G
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS----WNTMINGLAMHGN 328
+ ++ ++DM + G ++ A + LD + W M+ MH N
Sbjct: 346 VEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRN 396
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/355 (39%), Positives = 213/355 (60%), Gaps = 9/355 (2%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D + TLL+ Y+ +GD+ S K+F+EMP R+V SWN LI G R S+A+E +K+M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGNMFVGNALIDMYAKCGV 297
EG + ++ T+VA L ACS LG + G+ + H Y+ N+ V NA IDMY+KCG
Sbjct: 203 TEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGF 256
Query: 298 IESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
++ A VF ++ +++WNTMI G A+HG AL +FD+++++ +PD V+++ L+
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC H GLV G F +M + ++HYGC+ DLL RAG L +A + M M PD
Sbjct: 317 ACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
V+W SLLGA + +VE+AE+A + + E+ N +FV+LSN+Y GRW+DV R++ M
Sbjct: 376 VLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDM 435
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+K+PG S IE ++ EFY+ D+ H + IY + + +R GYV
Sbjct: 436 ESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQ 490
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 161/340 (47%), Gaps = 14/340 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVV------VLFAEMNRAAAAPLNHFT 54
+ A ++F +P+P T WNA+ G++ SH + +L + +A ++ T
Sbjct: 53 LSFAVQIFRYIPKPLTNDWNAIIRGFA-GSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
+++C++A +Q+HC +RG +S LCT L++ YS G + AYK+F EMP
Sbjct: 112 CSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP 171
Query: 115 ERNVVVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
R+V W A+I+ +S +R+ R V + GD+
Sbjct: 172 VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN 231
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSD 229
+F N +V+ N ++ Y+ G V +VFE+ +++V +WN +I G+A +G
Sbjct: 232 IFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHR 291
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
ALE F ++ G + P+D + +A L AC G ++ G V G + NM ++
Sbjct: 292 ALEIFDKLEDNG-IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVV 350
Query: 290 DMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGN 328
D+ ++ G + A D+ + D + W +++ ++ +
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSD 390
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG---------DVV 244
GD+ ++F +P+ WN +I G+A + S A ++ ML + D +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
FTL A C+R +H G + + L+D Y+K G + SA +
Sbjct: 111 TCSFTLKA----CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + RD+ SWN +I GL ++A+ L+ +M+ + VT V L AC+H+G V
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
++G F + I+ D+ + G +D+A + + V W +++
Sbjct: 227 KEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 425 ACRTHKNVEIAELAFQHL 442
H A F L
Sbjct: 282 GFAVHGEAHRALEIFDKL 299
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 270/536 (50%), Gaps = 20/536 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +FD+ E + +WN++ +GY + + + L A+M+R L + L V++
Sbjct: 199 LDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL-NLTTYALGSVLK 257
Query: 61 SCS---KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+C G + +G +HC AK G +++ + TAL++MY+ GS+ +A K+F MP +N
Sbjct: 258 ACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Query: 118 VVVWTAMISAYISCGDVGS-------------GRRLLDLAPER-DVVMWSIVISGYIESG 163
VV + AMIS ++ ++ RR L+ +P VV+ + + +E G
Sbjct: 318 VVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
+ A + + + + + L+ YA G + F ++++ SW +I + +
Sbjct: 378 RQIHALICKNNFQSDEFIG-SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
N + A + F+Q L + P ++T+ ++ AC+ AL G+ + YA G
Sbjct: 437 NEQLESAFDLFRQ-LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTS 495
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
V + I MYAK G + A VF + D+ +++ MI+ LA HG+ +AL++F+ MK
Sbjct: 496 VKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG 555
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+P+ F+G+L AC H GLV G YFQ M + Y I P +H+ C+ DLLGR G L A
Sbjct: 556 IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDA 615
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+ + + V W +LL +CR +K+ I + + L+ELEP+ ++V+L NIY D
Sbjct: 616 ENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDS 675
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
G ++ MRD G +K P S I + F D HP ++ IY L +
Sbjct: 676 GVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/540 (25%), Positives = 239/540 (44%), Gaps = 64/540 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR++FD+MPE N ++N++ +GY+ + + LF E R A L+ FT +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEA-REANLKLDKFTYAGALG 156
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C + + GE +H + G FL LI+MYS G + A +F ER+ V
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE--RD----------VVMWSIVIS---GYIESGDM 165
W ++IS Y+ VG+ L+L + RD V+ + I+ G+IE G
Sbjct: 217 WNSLISGYVR---VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
+ M D++ LL+ YA +G + K+F MP +NV ++N +I G+ +
Sbjct: 274 IHCYTAKLGM-EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 226 RFSD--ALEAFKQM--LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
+D + EAFK + + P+ T VL ACS L+ G+ +H ++ +
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
F+G+ALI++YA G E + F ++DI SW +MI+ + A LF Q+ +
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGF----LYFQSMVDHYSII---------------- 381
S +P+ T ++SAC + G +S +D ++ +
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 382 ----------PQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRT 428
P + Y M L + G ++A++ M ++P+ + +L AC
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC-C 571
Query: 429 HKNVEIAELAFQHLIELEPK---NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
H + L + ++ + + N +F L ++ GR D L ++ +GF+ P
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILS---SGFQDHP 628
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 19/320 (5%)
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
I+ ++ +K+G+V G+ H K +L L+ MY +G A ++F MPER
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY---------IESGDMVS 167
N++ + ++IS Y G L A E ++ + +G ++ G+++
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ + + ++ V N L++ Y+ G + +F+ ER+ SWN LI GY R G
Sbjct: 172 GLVVVNGL-SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACS---RLGALDMGKWVHVYAESIGYKGNMFV 284
+ L +M +G + + L +VL AC G ++ G +H Y +G + ++ V
Sbjct: 231 EEPLNLLAKMHRDG-LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD-----ALSLFDQM 339
AL+DMYAK G ++ A+ +F+ + ++++++N MI+G D A LF M
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
Query: 340 KNSREQPDGVTFVGILSACT 359
+ +P TF +L AC+
Sbjct: 350 QRRGLEPSPSTFSVVLKACS 369
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y ++G ++F+ MPERN+ S+N LI GY + G + A+E F + E ++ + FT
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFT 150
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
L C LD+G+ +H G +F+ N LIDMY+KCG ++ A+ +F+ D
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT---HMGLVRD 366
RD +SWN++I+G G + L+L +M +L AC + G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 367 GF---LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
G Y + + I+ + + D+ + G L +A+ MP + V + +++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMI 325
Query: 424 GACRTHKNV--EIAELAFQHLIE-----LEPKNPANF 453
+ E + AF+ ++ LEP +P+ F
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEP-SPSTF 361
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
++ G++ +GK H + +++ N L++MY KC + A +F+ + R+IIS+N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
++I+G G A+ LF + + + + D T+ G L C + G L +V
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL-LHGLVVV 176
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ Q+ + D+ + G LDQA+S + E D V W SL+
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLI 221
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 257/469 (54%), Gaps = 13/469 (2%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +F+ + N +N M GYS+++ +F ++ RA L+ F+ ++SC
Sbjct: 77 YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL-RAKGLTLDRFSFITTLKSC 135
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVVVW 121
S+ V GE +H +A + GF + L ALI Y G + DA KVF EMP+ + V +
Sbjct: 136 SRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTF 195
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMV---SARELFDK 174
+ +++ Y+ L + + +VV+ + ++ + GD+ SA L K
Sbjct: 196 STLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIK 255
Query: 175 MP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ + D+ L+ Y +G + S ++F+ ++V +WN +I YA+ G + +
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+QM E + PN T V +L +C+ A +G+ V E + +G AL+DMYA
Sbjct: 316 LRQMKYE-KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYA 374
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK--NSREQPDGVTF 351
K G++E AV++FN + +D+ SW MI+G HG +A++LF++M+ N + +P+ +TF
Sbjct: 375 KVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITF 434
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +L+AC+H GLV +G F+ MV+ YS P++EHYGC+ DLLGRAG L++A +R +P
Sbjct: 435 LVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLP 494
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
+ D+ W +LL ACR + N ++ E L E+ +PA+ ++L+ +
Sbjct: 495 ITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTH 543
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 38/285 (13%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
++D + + LL +++ D+ +FE + N++ +N +I GY+ + A F Q
Sbjct: 57 DKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQ 115
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+ +G + + F+ + L +CSR + +G+ +H A G+ + NALI Y CG
Sbjct: 116 LRAKG-LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCG 174
Query: 297 VIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
I A VF+ + + D ++++T++NG A AL LF M+ S + T + L
Sbjct: 175 KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 356 SA----------------CTHMGLVRDGFLYFQSMVDHY---------------SIIPQI 384
SA C +GL D L +++ Y +I +
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLDLHL-ITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGAC 426
+ CM D + GLL++ V +R+M M+P++ + LL +C
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC 338
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 265/502 (52%), Gaps = 63/502 (12%)
Query: 49 PLNHF-TLPIV--VRSCSKA----GAVRE---------GEQVHCVAAKRGFKWNSFLCTA 92
P NH+ T P+ V S S A GA++E G+++H K GF+ + +
Sbjct: 15 PSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIK 74
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVG-----------SGR--- 138
L+ ++ G + A +VF E+P+ + + MIS Y+ G V SG
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 139 ------------------------------RLLDLAPERDVVMWSIVISGYIESGDMVSA 168
R++ E D V+ + ++ Y++SG + SA
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R +F+ M + +V+ ++++GY N G V E++F +++ +N ++ G++R+G +
Sbjct: 195 RTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 229 D-ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+++ + M G PN T +V+ ACS L + ++G+ VH G ++ +G++
Sbjct: 255 KRSVDMYISMQRAG-FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSS 313
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+DMYAKCG I A VF+ + +++ SW +MI+G +GN +AL LF +MK R +P+
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN 373
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+G LSAC+H GLV G+ F+SM YS+ P++EHY C+ DL+GRAG L++A F
Sbjct: 374 YVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFA 433
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP-KNPANFVMLSNIYKDLGRW 466
R MP PD+ IW +LL +C H NVE+A +A L +L K P ++ LSN+Y +W
Sbjct: 434 RAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKW 493
Query: 467 QDVARLKIAMRDTGFRKLPGCS 488
+V++++ M+ K G S
Sbjct: 494 DNVSKIREVMKRRRISKTIGRS 515
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 49/375 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR+VFD++P+P + +N M +GY +++++L M+ + + +TL +V++
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKA-DGYTLSMVLK 143
Query: 61 SCSKAGAV-----REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+ + G+ VH K + + L TAL++ Y G + A VF M +
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG-------DMVSA 168
NVV T+MIS Y++ G V + + +D+V+++ ++ G+ SG DM +
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 169 RELFDKMPNRDVMS---------------------------------WNTLLNGYANSGD 195
+ PN + ++LL+ YA G
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ +VF++M E+NV+SW +I GY +NG +ALE F +M E + PN T + L
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGALS 382
Query: 256 ACSRLGALDMGKWV-HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDI 313
ACS G +D G + K M ++D+ + G + A + + +R D
Sbjct: 383 ACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDS 442
Query: 314 ISWNTMINGLAMHGN 328
W +++ +HGN
Sbjct: 443 DIWAALLSSCNLHGN 457
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 151/505 (29%), Positives = 272/505 (53%), Gaps = 23/505 (4%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HARK+FD++ + + +W AM + +S H D ++LF EM+R N FT V++SC
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKA-NQFTYGSVLKSC 123
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G ++EG Q+H K N + +AL+ +Y+ G + +A F M ER++V W
Sbjct: 124 KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWN 183
Query: 123 AMISAYIS--CGDVGSG--RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN- 177
AMI Y + C D + +L + D + ++ I +V E+ ++
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI----VVKCLEIVSELHGL 239
Query: 178 -------RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR-NGRFSD 229
R +L+N Y G + + K+ E +R++ S LI G+++ N SD
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVGNAL 288
A + FK M + ++ + ++L C+ + ++ +G+ +H +A +S + ++ +GN+L
Sbjct: 300 AFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMYAK G IE AV F + +D+ SW ++I G HGN A+ L+++M++ R +P+
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
VTF+ +LSAC+H G G+ + +M++ + I + EH C+ D+L R+G L++A + +R
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 409 KMP--MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+ + W + L ACR H NV+++++A L+ +EP+ P N++ L+++Y G W
Sbjct: 479 SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAW 538
Query: 467 QDVARLKIAMRDTG-FRKLPGCSVI 490
+ + M+++G K PG S++
Sbjct: 539 DNALNTRKLMKESGSCNKAPGYSLV 563
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 24/346 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR FD M E + +WNAM +GY+ LF M P + FT ++R
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP-DCFTFGSLLR 222
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ + ++H +A K GF +S L +L+ Y GS+ +A+K+ +R+++
Sbjct: 223 ASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLS 282
Query: 121 WTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVIS-----GYIESGDMVSARE 170
TA+I+ + + S + ++ + + D V+ S ++ + G +
Sbjct: 283 CTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
L DV N+L++ YA SG++ FEEM E++V SW LI GY R+G F A
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA 402
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI---GYKGNMFVGNA 287
++ + +M E + PND T +++L ACS G ++G W +Y I G + +
Sbjct: 403 IDLYNRMEHE-RIKPNDVTFLSLLSACSHTGQTELG-W-KIYDTMINKHGIEAREEHLSC 459
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIIS-----WNTMINGLAMHGN 328
+IDM A+ G +E A + + I+S W ++ HGN
Sbjct: 460 IIDMLARSGYLEEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGN 503
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 184/440 (41%), Gaps = 76/440 (17%)
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++ CS ++ +H + GF N L LI++Y +G V A K+F + +R+V
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 119 VVWTAMISAYISCG--------------------------------DVGSGRRLLDL--A 144
V WTAMIS + CG D+G + + + +
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 145 PER-----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGY-ANSGDVGS 198
E+ ++++ S ++S Y G M AR FD M RD++SWN +++GY AN+ S
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTS 198
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
F F+ ML EG P+ FT ++L A
Sbjct: 199 F--------------------------------SLFQLMLTEGK-KPDCFTFGSLLRASI 225
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+ L++ +H A +G+ + + +L++ Y KCG + +A + +RD++S
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTA 285
Query: 319 MINGLAMHGN-TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
+I G + N T+DA +F M + + D V +L CT + V G +
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAEL 437
I + + D+ ++G ++ AV +M E D WTSL+ H N E A +
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKA-I 403
Query: 438 AFQHLIELEPKNPANFVMLS 457
+ +E E P + LS
Sbjct: 404 DLYNRMEHERIKPNDVTFLS 423
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 259/497 (52%), Gaps = 24/497 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F + + + +W+AM Y H + + LF +M R P N TL V++ C+
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP-NAVTLTSVLQGCA 412
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A R G+ +HC A K + TA+I MY+ G A K F +P ++ V + A
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS--AR------ELFDKM 175
+ Y GD + V S + G +++ S AR ++
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + + L+N + + + +F++ E++ SWN+++ GY +G+ +A+ F
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+QM VE PN T V ++ A + L AL +G VH G+ VGN+L+DMYAK
Sbjct: 593 RQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG+IES+ F + + I+SWNTM++ A HG + A+SLF M+ + +PD V+F+ +
Sbjct: 652 CGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSV 711
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC H GLV +G F+ M + + I ++EHY CM DLLG+AGL +AV +R+M ++
Sbjct: 712 LSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKT 771
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+W +LL + R H N+ ++ A L++LEP NP+++ + + LG +V+R+K
Sbjct: 772 SVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNNVSRIK- 826
Query: 475 AMRDTGFRKLPGCSVIE 491
K+P CS IE
Sbjct: 827 --------KVPACSWIE 835
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 224/508 (44%), Gaps = 21/508 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFDKM + TWN M +G + ++LF +M R+ ++H +L ++ + S
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVS 212
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K +H + K+GF + + LI+MY + A VF E+ ++ W
Sbjct: 213 KLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMPNR- 178
M++AY G L DL DV M + + +++ GD+V + D +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 179 ---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
DV +L++ Y+ G++ E++F + +R+V SW+ +I Y + G+ +A+ F+
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M+ + PN TL +VL C+ + A +GK +H YA + + A+I MYAKC
Sbjct: 391 DMM-RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G A+ F L +D +++N + G G+ A ++ MK PD T VG+L
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 356 SACTHMGLVRDGFLYFQSMVDH-YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
C G + ++ H + + H + ++ + L A+ K E
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHL-IELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
V W ++ H E A F+ + +E N FV + +L + +
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVH 627
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYS 501
++ GF CS +S+V+ Y+
Sbjct: 628 SSLIQCGF-----CSQTPVGNSLVDMYA 650
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 208/429 (48%), Gaps = 17/429 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R +FD + +P WN+M GY+ HR+ + F M+ + ++ +++C+
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ ++G ++H + A+ G + + ++ TAL+EMY + A +VF +M ++VV W
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 124 MISAYISCGDVGSGRRLLDLAPERD-------VVMWSIVIS-GYIESGDMVSARELFDKM 175
M+S G S LL R V +++++ + +E D+ R L +
Sbjct: 172 MVSGLAQNG--CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDV--CRCLHGLV 227
Query: 176 PNRD-VMSWNT-LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ + ++++ L++ Y N D+ + E VFEE+ ++ SW ++ YA NG F + LE
Sbjct: 228 IKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F ++ DV N + L A + +G L G +H YA G G++ V +L+ MY+
Sbjct: 288 F-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYS 346
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG +E A +F ++ RD++SW+ MI G +A+SLF M +P+ VT
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L C + R G I ++E + + + G A+ ++P++
Sbjct: 407 VLQGCAGVAASRLG-KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 414 PDAVIWTSL 422
DAV + +L
Sbjct: 466 -DAVAFNAL 473
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+N Y+ +F+ + + V WN +I GY R G +AL F M E +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 244 VPNDFTLVAVLLACSRLGALDMGKW--VHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
P+ ++ L AC+ G++D K +H +G + ++++G AL++MY K + SA
Sbjct: 97 DPDKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA---- 357
VF+ + +D+++WNTM++GLA +G ++ AL LF M++ D V+ ++ A
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 358 -------CTHMGLVRDGFLY-FQS-MVDHY 378
C H +++ GF++ F S ++D Y
Sbjct: 215 EKSDVCRCLHGLVIKKGFIFAFSSGLIDMY 244
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 213/532 (40%), Gaps = 81/532 (15%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
P+N+ L +++R C R QVH G K ++ LI YS +
Sbjct: 2 PINYTNLLLMLRECKN---FRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRV 54
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER-----DVVMWSIVISGYIESG 163
+F + + VV+W +MI Y G E D ++ + S
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 164 DMVSARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
D + D + DV L+ Y + D+ S +VF++M ++V +WN ++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
G A+NG S AL F M V + +L ++ A S+L D+ + +H + K
Sbjct: 175 GLAQNGCSSAALLLFHDMR-SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL---VIKK 230
Query: 280 GNMFV-GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
G +F + LIDMY C + +A VF + R+D SW TM+ A +G + L LFD
Sbjct: 231 GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDL 290
Query: 339 MKNSREQPDGV---------TFVGIL--SACTHMGLVRDGFL----YFQSMVDHYSIIPQ 383
M+N + + V +VG L H V+ G + S++ YS +
Sbjct: 291 MRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE 350
Query: 384 IE---------------HYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGA 425
+E + M +AG D+A+S R M ++P+AV TS+L
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG 410
Query: 426 C------RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
C R K++ A + IE E + + ++Y GR+ +
Sbjct: 411 CAGVAASRLGKSIHC--YAIKADIESELETATAVI---SMYAKCGRFSPALK-------- 457
Query: 480 GFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
F +LP V F +L + + + +A + ++LHG P+
Sbjct: 458 AFERLP-------IKDAVAFNALAQGYTQIGDANKAF-DVYKNMKLHGVCPD 501
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 263/576 (45%), Gaps = 73/576 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF +MP + +WN++ + D + L M ++ +N+ T + +C
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVTFTSALAACF 356
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+G +H + G +N + AL+ MY GEM E
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK----------IGEMSE-------- 398
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS- 182
RR+L P RDVV W+ +I GY E D A F M V S
Sbjct: 399 -------------SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 183 ---------------------------------------WNTLLNGYANSGDVGSFEKVF 203
N+L+ YA GD+ S + +F
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ RN+ +WN ++ A +G + L+ +M G V + F+ L A ++L L
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVL 564
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+ G+ +H A +G++ + F+ NA DMY+KCG I V + R + SWN +I+ L
Sbjct: 565 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
HG + + F +M +P VTFV +L+AC+H GLV G Y+ + + + P
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 684
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
IEH C+ DLLGR+G L +A +F+ KMPM+P+ ++W SLL +C+ H N++ A ++L
Sbjct: 685 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 744
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD 503
+LEP++ + +V+ SN++ GRW+DV ++ M +K CS ++ D V F D
Sbjct: 745 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 804
Query: 504 ERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQGT 539
HP+T IY L + L++ GYV + Q T
Sbjct: 805 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 840
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 232/522 (44%), Gaps = 111/522 (21%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +FD+M E +T +WN++ Y+ + +F+ M R +N T+ ++
Sbjct: 196 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR-FHDEVNSTTVSTLLSVL 254
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G +H + K GF +C L+ MY+ G +A VF +MP ++++ W
Sbjct: 255 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 314
Query: 123 AMISAYIS-----------CGDVGSGRRL--------------LDLAPERDVVMWSIVIS 157
++++++++ C + SG+ + D + ++ +V+S
Sbjct: 315 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 374
Query: 158 G--------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
G Y + G+M +R + +MP RDV++WN L+ GYA
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE----------- 423
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG-A 262
+E P++ AL AF+ M VEG V N T+V+VL AC G
Sbjct: 424 DEDPDK--------------------ALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDL 462
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L+ GK +H Y S G++ + V N+LI MYAKCG + S+ D+FN LD R+II+WN M+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG--------------- 367
A HG+ + L L +M++ D +F LSA + ++ +G
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 368 FLYFQSMVDHYS----------IIP-----QIEHYGCMADLLGRAGLLDQAVSFVR---K 409
F + D YS ++P + + + LGR G ++ + +
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 642
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE----LEP 447
M ++P V + SLL AC +H + LA+ +I LEP
Sbjct: 643 MGIKPGHVTFVSLLTAC-SHGGLVDKGLAYYDMIARDFGLEP 683
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 211/446 (47%), Gaps = 23/446 (5%)
Query: 11 MPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAV-R 69
MP N +WN M +G + + + F +M P + F + +V +C ++G++ R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP-SSFVIASLVTACGRSGSMFR 59
Query: 70 EGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI 129
EG QVH AK G + ++ TA++ +Y G V + KVF EMP+RNVV WT+++ Y
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 130 SCG------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
G D+ G R + + + S+VIS D R++ ++ + S
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSM--SLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 184 ----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
N+L++ + G+V +F++M ER+ SWN + YA+NG ++ F M
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKW---VHVYAESIGYKGNMFVGNALIDMYAKCG 296
D V + T V+ LL S LG +D KW +H +G+ + V N L+ MYA G
Sbjct: 238 FHDEVNS--TTVSTLL--SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
A VF + +D+ISWN+++ G + DAL L M +S + + VTF L+
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC G + +V QI + + G+ G + ++ + +MP D
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDV 411
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHL 442
V W +L+G ++ + A AFQ +
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTM 437
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 169/363 (46%), Gaps = 10/363 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+RKVF++MP+ N +W ++ GYS +V+ ++ M R N ++ +V+ SC
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCG 154
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G Q+ K G + + +LI M + G+V A +F +M ER+ + W +
Sbjct: 155 LLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 214
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE-------LFDKMP 176
+ +AY G + R+ L + S +S + V ++ L KM
Sbjct: 215 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 177 NRDVMS-WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
V+ NTLL YA +G VF++MP +++ SWN L+ + +GR DAL
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M+ G V N T + L AC + G+ +H G N +GNAL+ MY K
Sbjct: 335 SMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + + V + RRD+++WN +I G A + AL+ F M+ + +T V +L
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 356 SAC 358
SAC
Sbjct: 454 SAC 456
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +R+V +MP + WNA+ GY+ E + F M R N+ T+ V+
Sbjct: 396 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLS 454
Query: 61 SCSKAGAVRE-GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C G + E G+ +H GF+ + + +LI MY+ G + + +F + RN++
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELF 172
W AM++A G G +L L + D +S +S + + ++L
Sbjct: 515 TWNAMLAAN---AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Query: 173 DKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
D +N + Y+ G++G K+ R++ SWN+LI R+G F
Sbjct: 572 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 631
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNA 287
+ F +ML G + P T V++L ACS G +D G + + A G + +
Sbjct: 632 EVCATFHEMLEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 690
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
+ID+ + G + A + + + + + W +++ +HGN
Sbjct: 691 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 732
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 263/576 (45%), Gaps = 73/576 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF +MP + +WN++ + D + L M ++ +N+ T + +C
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVTFTSALAACF 373
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+G +H + G +N + AL+ MY GEM E
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK----------IGEMSE-------- 415
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS- 182
RR+L P RDVV W+ +I GY E D A F M V S
Sbjct: 416 -------------SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 183 ---------------------------------------WNTLLNGYANSGDVGSFEKVF 203
N+L+ YA GD+ S + +F
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ RN+ +WN ++ A +G + L+ +M G V + F+ L A ++L L
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVL 581
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+ G+ +H A +G++ + F+ NA DMY+KCG I V + R + SWN +I+ L
Sbjct: 582 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
HG + + F +M +P VTFV +L+AC+H GLV G Y+ + + + P
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 701
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
IEH C+ DLLGR+G L +A +F+ KMPM+P+ ++W SLL +C+ H N++ A ++L
Sbjct: 702 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 761
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD 503
+LEP++ + +V+ SN++ GRW+DV ++ M +K CS ++ D V F D
Sbjct: 762 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 821
Query: 504 ERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQGT 539
HP+T IY L + L++ GYV + Q T
Sbjct: 822 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 857
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 216/453 (47%), Gaps = 23/453 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD MP N +WN M +G + + + F +M P + F + +V +C
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP-SSFVIASLVTACG 69
Query: 64 KAGAV-REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++G++ REG QVH AK G + ++ TA++ +Y G V + KVF EMP+RNVV WT
Sbjct: 70 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 123 AMISAYISCG------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+++ Y G D+ G R + + + S+VIS D R++ ++
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM--SLVISSCGLLKDESLGRQIIGQVV 187
Query: 177 NRDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ S N+L++ + G+V +F++M ER+ SWN + YA+NG ++
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW---VHVYAESIGYKGNMFVGNALI 289
F M D V + T V+ LL S LG +D KW +H +G+ + V N L+
Sbjct: 248 IFSLMRRFHDEVNS--TTVSTLL--SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
MYA G A VF + +D+ISWN+++ G + DAL L M +S + + V
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF L+AC G + +V QI + + G+ G + ++ + +
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQ 422
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
MP D V W +L+G ++ + A AFQ +
Sbjct: 423 MP-RRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 231/522 (44%), Gaps = 111/522 (21%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +FD+M E +T +WN++ Y+ + +F+ M R +N T+ ++
Sbjct: 213 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR-FHDEVNSTTVSTLLSVL 271
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G +H + K GF +C L+ MY+ G +A VF +MP ++++ W
Sbjct: 272 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331
Query: 123 AMISAYIS-----------CGDVGSGRRL--------------LDLAPERDVVMWSIVIS 157
++++++++ C + SG+ + D + ++ +V+S
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 391
Query: 158 G--------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
G Y + G+M +R + +MP RDV++WN L+ GYA D
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-------- 443
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG-A 262
P++ AL AF+ M VEG V N T+V+VL AC G
Sbjct: 444 ---PDK--------------------ALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDL 479
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L+ GK +H Y S G++ + V N+LI MYAKCG + S+ D+FN LD R+II+WN M+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG--------------- 367
A HG+ + L L +M++ D +F LSA + ++ +G
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 368 FLYFQSMVDHYS----------IIP-----QIEHYGCMADLLGRAGLLDQAVSFVR---K 409
F + D YS ++P + + + LGR G ++ + +
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE----LEP 447
M ++P V + SLL AC +H + LA+ +I LEP
Sbjct: 660 MGIKPGHVTFVSLLTAC-SHGGLVDKGLAYYDMIARDFGLEP 700
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +R+V +MP + WNA+ GY+ E + F M R N+ T+ V+
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLS 471
Query: 61 SCSKAGAVRE-GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C G + E G+ +H GF+ + + +LI MY+ G + + +F + RN++
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELF 172
W AM++A G G +L L + D +S +S + + ++L
Sbjct: 532 TWNAMLAAN---AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Query: 173 DKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
D +N + Y+ G++G K+ R++ SWN+LI R+G F
Sbjct: 589 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNA 287
+ F +ML G + P T V++L ACS G +D G + + A G + +
Sbjct: 649 EVCATFHEMLEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 707
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
+ID+ + G + A + + + + + W +++ +HGN
Sbjct: 708 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 749
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 157/353 (44%), Gaps = 40/353 (11%)
Query: 96 MYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG----RRLLDLAPERDVVM 151
MY+ G V A +F MP RN V W M+S + G G R++ DL + +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 152 WSIVISGYIESGDMVSARELFDKMPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEM 206
+ +++ SG M + DV +L+ Y G V KVFEEM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
P+RNV SW L+ GY+ G + ++ +K M EG V N+ ++ V+ +C L +G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSCGLLKDESLG 179
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
+ + G + + V N+LI M G ++ A +F+ + RD ISWN++ A +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHM----------GLVRDGFLYFQSMVD 376
G+ ++ +F M+ ++ + T +LS H+ GLV + F S+V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDSVV- 296
Query: 377 HYSIIPQIEHYGCMADLLGR----AGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
C+ + L R AG +A ++MP + D + W SL+ +
Sbjct: 297 ------------CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 255/499 (51%), Gaps = 38/499 (7%)
Query: 58 VVRSCSKAGAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++ +C A ++ G ++ + + N L + LI ++S + A K+F ++ +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 117 NVV---VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG---------- 163
+++ VW AM Y G +P ++++ ++ +IE G
Sbjct: 197 SLLTEKVWAAMAIGYSRNG-----------SPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 164 -----DMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
D+ R + ++ R D + +N LL Y SG KVF+ M ERNV +W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF-TLVAVLLACSRLGALDMGKWVHVYA 273
N LI ++ R + F++M + +++ + TL +L ACSR+ AL GK +H
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKM--QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
K ++ + N+L+DMY KCG +E + VF+ + +D+ SWN M+N A++GN + +
Sbjct: 364 LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+LF+ M S PDG+TFV +LS C+ GL G F+ M + + P +EHY C+ D+
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
LGRAG + +AV + MP +P A IW SLL +CR H NV + E+A + L LEP NP N+
Sbjct: 484 LGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNY 543
Query: 454 VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIY 513
VM+SNIY D W +V +++ M+ G +K GCS ++ D + F + Y
Sbjct: 544 VMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEY 603
Query: 514 RAL-RGLTMLLRLHGYVPN 531
+ + L + GY PN
Sbjct: 604 KKVWTELQEAIEKSGYSPN 622
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 27/346 (7%)
Query: 4 ARKVFDKMPEPNTAT---WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
ARK+FD + + + T W AM GYS S RD ++++ +M + P N F++ + ++
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGN-FSISVALK 244
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C +R G +H KR K + + L+++Y G DA KVF M ERNVV
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDV-VMWSIVIS--------GYIESGDMVSAREL 171
W ++IS V L E + W+ + + + +G + A+ L
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
K DV N+L++ Y G+V +VF+ M +++ SWN+++ YA NG + +
Sbjct: 365 KSK-EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA---- 287
F+ M +E V P+ T VA+L CS G + G + ++ K V A
Sbjct: 424 NLFEWM-IESGVAPDGITFVALLSGCSDTGLTEYG--LSLFER---MKTEFRVSPALEHY 477
Query: 288 --LIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNTA 330
L+D+ + G I+ AV V + + S W +++N +HGN +
Sbjct: 478 ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
++R+VFD M + A+WN M N Y++ + +V+ LF M + AP + T ++ C
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP-DGITFVALLSGC 448
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFL--CTALIEMYSAKGSVGDAYKVFGEMPER-NVV 119
S G G + K F+ + L L+++ G + +A KV MP + +
Sbjct: 449 SDTGLTEYGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 507
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
+W +++++ G+V G ++A+ELF P+ +
Sbjct: 508 IWGSLLNSCRLHGNVSVGE---------------------------IAAKELFVLEPH-N 539
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
++ + N YA++ + +K+ E M +R V
Sbjct: 540 PGNYVMVSNIYADAKMWDNVDKIREMMKQRGV 571
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 269/522 (51%), Gaps = 20/522 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FD + + WN M G + D ++ F M + P FT IV+ CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDP-TQFTYSIVLNGCS 311
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K G+ G+ +H + L AL++MY + G + +A+ VFG + N+V W +
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 124 MISAYISCGDVGSG-------RRLLDLA-PERDVVMWSIVISGYIESGDMVSARELFDKM 175
+IS C + G G RRLL ++ P D +S IS E V + L ++
Sbjct: 372 IISG---CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 176 PN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R V TLL+ Y + + S +KVF+ M ER+V W +I G++R G A+
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F +M E + + F+L +V+ ACS + L G+ H A G+ M V AL+DM
Sbjct: 489 QFFIEMYREKNR-SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y K G E+A +F+ D+ WN+M+ + HG ALS F+Q+ + PD VT+
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +L+AC+H G G + M + I +HY CM +L+ +AGL+D+A+ + + P
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 412 M-EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
A +W +LL AC +N++I A + +++L+P++ A ++LSN+Y GRW+DVA
Sbjct: 667 PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVA 726
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVE-FYSLDERHPETES 511
++ +R K PG S IE N++ + F S D+ +PE S
Sbjct: 727 EMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVS 768
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 211/451 (46%), Gaps = 12/451 (2%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVVRS 61
ARKVFDKMP N ++NA+++ YS L M P N T +V+
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP-NSSTFTSLVQV 208
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C+ V G ++ K G+ N + T+++ MYS+ G + A ++F + R+ V W
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW 268
Query: 122 TAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
MI + + G R +L + +SIV++G + G + + ++
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIV 328
Query: 178 RDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
D ++ N LL+ Y + GD+ VF + N+ SWN +I G + NG A+
Sbjct: 329 SDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLM 388
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
++++L P+++T A + A + GK +H +GY+ ++FVG L+ MY
Sbjct: 389 YRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYF 448
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
K ESA VF+ + RD++ W MI G + GN+ A+ F +M + + DG +
Sbjct: 449 KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSS 508
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
++ AC+ M ++R G + F + + G + D+ G+ G + A + + +
Sbjct: 509 VIGACSDMAMLRQGEV-FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSLASN 566
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
PD W S+LGA H VE A F+ ++E
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 241/576 (41%), Gaps = 119/576 (20%)
Query: 3 HARKVFDKMPEPNTATW---NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV- 58
ARKVFDKMP+ N T +A+F S+ S ++ PLN +V
Sbjct: 40 QARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVE 99
Query: 59 -VRSCSKAGAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
R C ++ Q+H + G + + LI MY GS+ A KVF +MP
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 115 ERNVVVWTAMISAYISCGDVGS-------------------------------------- 136
RNVV + A+ SAY D S
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 137 --GRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG 194
+++ L +VV+ + V+ Y GD+ SAR +FD + NRD ++WNT++
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI------- 272
Query: 195 DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
VGS +N + D L F+ ML+ G V P FT VL
Sbjct: 273 -VGSL-----------------------KNDKIEDGLMFFRNMLMSG-VDPTQFTYSIVL 307
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
CS+LG+ +GK +H ++ + NAL+DMY CG + A VF + +++
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 315 SWNTMINGLAMHGNTADALSLFDQ-MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
SWN++I+G + +G A+ ++ + ++ S +PD TF +SA G L
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKL---- 423
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLD--------QAVSFVRKMPMEPDAVIWTSLLGA 425
+ Q+ G + LL ++ V + E D V+WT ++
Sbjct: 424 ------LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 426 CRTHKNVEIAELAFQHLIEL-EPKNPANFVMLSNIYKDLGRWQDVARLK-------IAMR 477
H + +ELA Q IE+ KN ++ LS++ +G D+A L+ +A+R
Sbjct: 478 ---HSRLGNSELAVQFFIEMYREKNRSDGFSLSSV---IGACSDMAMLRQGEVFHCLAIR 531
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIY 513
TGF C + C ++V+ Y + ++ E+I+
Sbjct: 532 -TGF----DCVMSVCG-ALVDMYGKNGKYETAETIF 561
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 11/313 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A VF ++ PN +WN++ +G S ++++ + R + + +T +
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ ++ G+ +H K G++ + F+ T L+ MY A KVF M ER+VV+
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVL 470
Query: 121 WTAMISAYISCGDVGSGRR-LLDLAPER---DVVMWSIVISGYIESGDMVSARELFDKMP 176
WT MI + G+ + +++ E+ D S VI G M+ E+F +
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI-GACSDMAMLRQGEVFHCLA 529
Query: 177 NRD----VMS-WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R VMS L++ Y +G + E +F ++ WN ++G Y+++G AL
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F+Q+L E +P+ T +++L ACS G+ GK++ + G K + ++++
Sbjct: 590 SFFEQIL-ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNL 648
Query: 292 YAKCGVIESAVDV 304
+K G+++ A+++
Sbjct: 649 VSKAGLVDEALEL 661
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 15/187 (8%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L++ Y + KVF++MP+RN+ + L G A S Q++ G
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVT---LFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 244 VPNDF--------TLVAVLLACSRLGALDMGKWVHVYAESIGYKG---NMFVGNALIDMY 292
F ++V + C + L + +H + G + + N LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD-ALSLFDQMKNSREQPDGVTF 351
+CG +E A VF+ + R+++S+N + + + + + A A L M +P+ TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 352 VGILSAC 358
++ C
Sbjct: 203 TSLVQVC 209
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 256/494 (51%), Gaps = 17/494 (3%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
F ++ + + +W ++ + + + +F EM P + + ++ K
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP-DGVVISCLINELGKMML 346
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVVVWTAMIS 126
V +G+ H + F +S +C +L+ MY + A K+F + E N W M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 127 AY------ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDKMP 176
Y + C ++ R++ +L E D + VIS G ++ + L
Sbjct: 407 GYGKMKCHVKCIELF--RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+ + N+L++ Y GD+ ++F E + NV +WN +I Y + A+ F +
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+ E + P+ TLV +L+AC G+L+ G+ +H Y ++ N+ + ALIDMYAKCG
Sbjct: 524 MVSE-NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+E + ++F+ +++D + WN MI+G MHG+ A++LFDQM+ S +P G TF+ +LS
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
ACTH GLV G F M Y + P ++HY C+ DLL R+G L++A S V MP PD
Sbjct: 643 ACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
VIW +LL +C TH E+ + + +P+N ++ML+N+Y G+W++ R + M
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 477 RDTGFRKLPGCSVI 490
R++G K G SV+
Sbjct: 762 RESGVGKRAGHSVV 775
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 217/471 (46%), Gaps = 31/471 (6%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAA---APLNHFTLPIVVRSCS 63
VFD+MP+ + W A+ +G+ + +M+ A + P N TL ++CS
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP-NPRTLECGFQACS 241
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA++EG +H A K G + F+ +++ YS G+ +AY F E+ + ++ WT+
Sbjct: 242 NLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTS 301
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI-ESGDM--VSARELFDKMPNRDV 180
+I++ GD+ + + + +VIS I E G M V + F R
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361
Query: 181 MSW-----NTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAF 234
S N+LL+ Y + EK+F + E N +WN ++ GY + +E F
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+++ G + + + +V+ +CS +GA+ +GK +H Y + V N+LID+Y K
Sbjct: 422 RKIQNLG-IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G + A +F C ++I+WN MI + A++LFD+M + +P +T V +
Sbjct: 481 MGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH------YGCMADLLGRAGLLDQAVSFVR 408
L AC + G + G M+ Y I + EH + D+ + G L+++
Sbjct: 540 LMACVNTGSLERG-----QMIHRY--ITETEHEMNLSLSAALIDMYAKCGHLEKSRELF- 591
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLS 457
+ DAV W ++ H +VE A F + E ++P P +LS
Sbjct: 592 DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 161/355 (45%), Gaps = 14/355 (3%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTAL 93
++VV +++ ++A+ ++ I V C ++ ++ + + + G N F+ + L
Sbjct: 9 NLVVTLRKLSSSSASYVDRH---ISVILCDQSLSLESLRKHNALIITGGLSENIFVASKL 65
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR----RLLDLAPERDV 149
I Y++ G + +VF + R++ +W ++I A+ S GD +L D
Sbjct: 66 ISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH 125
Query: 150 VMWSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
+V+S + G V L +R+ + + Y+ G + VF+
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV--PNDFTLVAVLLACSRLGA 262
EMP+R+V +W +I G+ +NG L +M G V PN TL ACS LGA
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L G+ +H +A G + FV +++ Y+K G A F L D+ SW ++I
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
LA G+ ++ +F +M+N PDGV +++ M LV G + ++ H
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R++FD + + WN M +GY + + LF +M + P T ++ +C+
Sbjct: 587 SRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP-TFLALLSACT 645
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVWT 122
AG V +G+++ + K N + L+++ S G++ +A MP + V+W
Sbjct: 646 HAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWG 705
Query: 123 AMISAYISCGDVGSGRRLLDLAPERD 148
++S+ ++ G+ G R+ + A D
Sbjct: 706 TLLSSCMTHGEFEMGIRMAERAVASD 731
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 210/352 (59%), Gaps = 4/352 (1%)
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
L E V + + ++ Y+ G+M+ A ++FD+MP R+ ++WN ++ G N GD
Sbjct: 152 LGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
E+MP R V SW +I GYAR + +A+ F +M+ + PN+ T++A+L A LG
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 263 LDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTM 319
L M VH Y G+ ++ V N+LID YAKCG I+SA F + R++++SW TM
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL-YFQSMVDHY 378
I+ A+HG +A+S+F M+ +P+ VT + +L+AC+H GL + FL +F +MV+ Y
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
I P ++HYGC+ D+L R G L++A ++P+E AV+W LLGAC + + E+AE
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
+ L+ELE + ++V++SNI+ GR+ D R + M G KLPG S +
Sbjct: 452 TRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 153/342 (44%), Gaps = 58/342 (16%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNR--------AAAAPLNHFTLPIVVRSCS--KAGAV 68
+N + YSL E+ L+ ++ R + P + FT ++++ S + ++
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 69 REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAY 128
G +H + K GF+ + ++ TAL+ MY G++ DA+KVF EMPERN V W MI+
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 129 ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-------PNR--- 178
+ GD L+ P R VV W+ +I GY A LF +M PN
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 179 -------------------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
D+ N+L++ YA G + S K F E+P
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 208 --ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
+N+ SW +I +A +G +A+ FK M G + PN T+++VL ACS G L
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG-LKPNRVTMISVLNACSH-GGLAE 377
Query: 266 GKWVHVYAESIG-YKGNMFVGN--ALIDMYAKCGVIESAVDV 304
+++ + + YK V + L+DM + G +E A +
Sbjct: 378 EEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 51/268 (19%)
Query: 1 MGHARKVFDKMPEPNTATWNAMF-------------------------------NGYSLT 29
M A KVFD+MPE N TWN M +GY+
Sbjct: 174 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 233
Query: 30 ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGF-KWNSF 88
+ ++ ++LF+ M A N T+ ++ + G ++ VH KRGF +
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVVWTAMISAYISCG------DVGSGRRL 140
+ +LI+ Y+ G + A+K F E+P +N+V WT MISA+ G +
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 353
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSAR--ELFDKMPNR-----DVMSWNTLLNGYANS 193
L L P R V M S++ G + E F+ M N DV + L++
Sbjct: 354 LGLKPNR-VTMISVL--NACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 194 GDVGSFEKVFEEMP-ERNVYSWNVLIGG 220
G + EK+ E+P E W +L+G
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 246 NDFTLVAVLLACS--RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+ FT + +L A S R +L +G +H +G++ +++V AL+ MY G + A
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ + R+ ++WN MI GL G+ AL ++M N V++ I+ +
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR----TVVSWTTIIDGYARVDK 235
Query: 364 VRDGFLYFQSMVDHYSIIP 382
++ L F MV +I P
Sbjct: 236 PKEAILLFSRMVACDAIKP 254
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 265/485 (54%), Gaps = 18/485 (3%)
Query: 15 NTATWNAMFNGYSLTESHRD-VVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
+ T+N + +G L RD +++F +M A+ P + T V+ SCS A G Q
Sbjct: 256 DQVTFNVVIDG--LAGFKRDESLLVFRKMLEASLRPTD-LTFVSVMGSCSCAAM---GHQ 309
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAY----- 128
VH +A K G++ + + A + MYS+ G A+KVF + E+++V W MIS+Y
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 129 -ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL 187
S V ++ + P+ + S ++ +MV A + + ++ +S N L+
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS-NALI 428
Query: 188 NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML-VEGDVVPN 246
+ Y+ +G + + +FE +N+ SWN +I G+ NG + LE F +L E ++P+
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
+TL +L C +L +G H Y G +GNALI+MY++CG I+++++VFN
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 307 CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS-REQPDGVTFVGILSACTHMGLVR 365
+ +D++SWN++I+ + HG +A++ + M++ + PD TF +LSAC+H GLV
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVE 608
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR--KMPMEPDAVIWTSLL 423
+G F SMV+ + +I ++H+ C+ DLLGRAG LD+A S V+ + + +W +L
Sbjct: 609 EGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALF 668
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
AC H ++++ ++ + L+E E +P+ +V LSNIY G W++ + A+ G K
Sbjct: 669 SACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Query: 484 LPGCS 488
GCS
Sbjct: 729 QRGCS 733
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 198/445 (44%), Gaps = 51/445 (11%)
Query: 20 NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
N G + + +R+ + LFA+++R + +++ + + + G QVHC A
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRR 139
+ G +S + L+ +Y G++ K F E+ E +V WT ++SA GD+
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 140 LLDLAPER-DVVMWSIVISGYIESGDMVSARELF----------DKMPNRDVMSW----- 183
+ D PER DV +W+ +I+G ESG ++ ELF DK ++S
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 184 -----------------------NTLLNGYANSGDVGSFEKVFEE--MPERNVYSWNVLI 218
N L+ Y N V VFEE + R+ ++NV+I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G A R ++L F++ML E + P D T V+V+ +CS MG VH A GY
Sbjct: 265 DGLAGFKR-DESLLVFRKML-EASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGY 319
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V NA + MY+ +A VF L+ +D+++WNTMI+ A+S++ +
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M +PD TF +L+ L D Q+ + + + +IE + + G
Sbjct: 380 MHIIGVKPDEFTFGSLLAT----SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLL 423
+++A + + + + + W +++
Sbjct: 436 QIEKA-DLLFERSLRKNLISWNAII 459
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 22/343 (6%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G A KVF+ + E + TWN M + Y+ + + + ++ M+ P + FT ++ +
Sbjct: 340 GAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP-DEFTFGSLLAT 398
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ E V K G + ALI YS G + A +F +N++ W
Sbjct: 399 SLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISW 455
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVM------WSIVISGYIESGDMVSARE----L 171
A+IS + G G E +V + S ++S + + ++ + +
Sbjct: 456 NAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ + N L+N Y+ G + + +VF +M E++V SWN LI Y+R+G +A+
Sbjct: 516 LRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAV 575
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG---NMFVGNAL 288
+K M EG V+P+ T AVL ACS G ++ G + ++ + + G N+ + L
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG--LEIFNSMVEFHGVIRNVDHFSCL 633
Query: 289 IDMYAKCGVIESAVDVFNCLDR---RDIISWNTMINGLAMHGN 328
+D+ + G ++ A + ++ + W + + A HG+
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGD 676
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 21/302 (6%)
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYS 213
++S Y G++ S ++ FD++ DV SW TLL+ GD+ +VF++MPER +V
Sbjct: 98 LLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI 157
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN +I G +G ++E F++M G V + F +L C G+LD GK VH
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGFATILSMCD-YGSLDFGKQVHSLV 215
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMINGLAMHGNTAD 331
G+ V NALI MY C V+ A VF D RD +++N +I+GLA +
Sbjct: 216 IKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-E 274
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACT--HMGLVRDGFLYFQSMVDHYSIIPQ--IEHY 387
+L +F +M + +P +TFV ++ +C+ MG G L ++ + Y+++ + Y
Sbjct: 275 SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHG-LAIKTGYEKYTLVSNATMTMY 333
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ--HLIEL 445
D G A + +++ E D V W +++ + K + A ++ H+I +
Sbjct: 334 SSFED-FGAAHKVFESLE-------EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 446 EP 447
+P
Sbjct: 386 KP 387
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+VF++M E + +WN++ + YS + V + M + T V+ +CS A
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 66 GAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDA---YKVFGEMPERNVVVW 121
G V EG ++ + + G N + L+++ G + +A K+ + V VW
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERD 148
A+ SA + GD+ G+ + L E++
Sbjct: 665 WALFSACAAHGDLKLGKMVAKLLMEKE 691
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 250/498 (50%), Gaps = 72/498 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTE-SHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ +A VF + P+T +N + +L E S F EM R + P H T P V
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFH-TFPFVF 122
Query: 60 RSCS--KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++C+ K G + + +HC A + G + F LI +YS + A ++F E
Sbjct: 123 KACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE----- 177
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
P+RDVV ++++I G +++ ++V ARELFD MP
Sbjct: 178 --------------------------NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPL 211
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
RD++SWN+L++GYA K+F+EM V +G
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEM---------VALG------------------ 244
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ P++ +V+ L AC++ G GK +H Y + + F+ L+D YAKCG
Sbjct: 245 -----LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
I++A+++F + + +WN MI GLAMHGN + F +M +S +PDGVTF+ +L
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---- 413
C+H GLV + F M Y + +++HYGCMADLLGRAGL+++A + +MP +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
+ W+ LLG CR H N+EIAE A + L P++ + ++ +Y + RW++V +++
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 474 -IAMRDTGFRKLPGCSVI 490
I RD +K G S +
Sbjct: 480 EIIDRDKKVKKNVGFSKV 497
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 276/553 (49%), Gaps = 26/553 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR+VFD M E + TWN++ ++ V ++ M P + +TL V +
Sbjct: 115 IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP-DEYTLSSVFK 173
Query: 61 SCSKAGAVREGEQVHCVAAKRGFK-WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ S +E ++ H +A G + N F+ +AL++MY G +A V + E++VV
Sbjct: 174 AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVV 233
Query: 120 VWTAMISAYISCGDVGSGRR-----LLDLAPERDVVMWSIVIS---------GYIESGDM 165
+ TA+I Y G+ + L++ + S++IS G + G M
Sbjct: 234 LITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM 293
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
V + F+ + S +LL Y V +VF+ + N SW LI G +NG
Sbjct: 294 VKSG--FESA----LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG 347
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
R AL F++M+ + + PN FTL + L CS L + G+ +H G+ + + G
Sbjct: 348 REEMALIEFRKMMRDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG 406
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
+ LID+Y KCG + A VF+ L D+IS NTMI A +G +AL LF++M N Q
Sbjct: 407 SGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQ 466
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P+ VT + +L AC + LV +G F S I+ +HY CM DLLGRAG L++A
Sbjct: 467 PNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEM 525
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
++ + PD V+W +LL AC+ H+ VE+AE + ++E+EP + +++SN+Y G+
Sbjct: 526 LTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGK 584
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDE-RHPETESIYRALRGLTMLLR 524
W V +K M+D +K P S +E N F + D HP +E I L L +
Sbjct: 585 WNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSK 644
Query: 525 LHGYVPNLVDVAQ 537
GYV + V Q
Sbjct: 645 DLGYVEDKSCVFQ 657
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 147/312 (47%), Gaps = 11/312 (3%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + A +VF M ER++V W ++I+ I + L +V+ +S
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 161 ES-GDMVSARE--------LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
++ D+ +E + + +V + L++ Y G + V + + E++V
Sbjct: 173 KAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDV 232
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
LI GY++ G ++A++AF+ MLVE V PN++T +VL++C L + GK +H
Sbjct: 233 VLITALIVGYSQKGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHG 291
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
G++ + +L+ MY +C +++ ++ VF C++ + +SW ++I+GL +G
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL F +M +P+ T L C+++ + +G +V Y +
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLI 410
Query: 392 DLLGRAGLLDQA 403
DL G+ G D A
Sbjct: 411 DLYGKCGCSDMA 422
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 5/278 (1%)
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+S + L++ GD+ +VF+ M ER++ +WN LI ++ R +A+E ++ +++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR-LMIT 158
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALIDMYAKCGVIE 299
+V+P+++TL +V A S L + H A +G + N+FVG+AL+DMY K G
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
A V + ++ +D++ +I G + G +A+ F M + QP+ T+ +L +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
++ + +G L MV + + + R L+D ++ V K P+ V W
Sbjct: 279 NLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLR-VFKCIEYPNQVSW 336
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
TSL+ + E+A + F+ ++ K P +F + S
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIK-PNSFTLSS 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 25/260 (9%)
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F+ + + D + +L C ++ K + + G+ + G+ L+D
Sbjct: 52 FRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASL 110
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG I+ A VF+ + R I++WN++I L H + +A+ ++ M + PD T
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF--VRKMP 411
+ A + + L ++ ++I +E ++++ + L+D V F R+
Sbjct: 171 VFKAFSDLSLEKEA-----QRSHGLAVILGLE----VSNVFVGSALVDMYVKFGKTREAK 221
Query: 412 M------EPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ E D V+ T+L+ G + ++ E + AFQ ++ +E P + S + G
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVK-AFQSML-VEKVQPNEYTYAS-VLISCG 278
Query: 465 RWQDVARLKIA---MRDTGF 481
+D+ K+ M +GF
Sbjct: 279 NLKDIGNGKLIHGLMVKSGF 298
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 238/457 (52%), Gaps = 23/457 (5%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
NH L ++ SK +++ +Q+H G +++ + L+ + S+ + A +
Sbjct: 9 NHRCLNLI----SKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSIL 63
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDL------------APERDVVMWSIVISG 158
++P +V ++ +IS+ +S + L P SG
Sbjct: 64 RQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASG 123
Query: 159 Y----IESGDMVSAREL-FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+ G + A L F + N D L+ YAN G + +FE + E ++ +
Sbjct: 124 FDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLAT 183
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN L+ YA N D+ E + + V PN+ +LVA++ +C+ LG G W HVY
Sbjct: 184 WNTLLAAYA-NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYV 242
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
N FVG +LID+Y+KCG + A VF+ + +RD+ +N MI GLA+HG + +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
L+ + + PD TFV +SAC+H GLV +G F SM Y I P++EHYGC+ DL
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDL 362
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
LGR+G L++A ++KMP++P+A +W S LG+ +TH + E E+A +HL+ LE +N N+
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNY 422
Query: 454 VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
V+LSNIY + RW DV + + M+D K PG S +
Sbjct: 423 VLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTE---SHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
AR +F+++ EP+ ATWN + Y+ +E S +V++LF M P N +L +++
Sbjct: 169 ARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRP-NELSLVALIK 224
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ G G H K N F+ T+LI++YS G + A KVF EM +R+V
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSC 284
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+ AMI G G + L+ D + + IS SG + ++F+ M
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDA 230
V + L++ SG + E+ ++MP + N W +G +G F
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
Query: 231 LEAFKQML 238
A K +L
Sbjct: 405 EIALKHLL 412
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 159/347 (45%), Gaps = 21/347 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNG----YSLTESHRDVVVLFAEM--NRAAAAPLNHFT 54
+ +A + ++P P+ +N + + ++ T++H L+ ++ +R+ N FT
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHL-AFSLYDQILSSRSNFVRPNEFT 114
Query: 55 LPIVVRSCS-KAGAVREGEQVHCVAAK--RGFKWNSFLCTALIEMYSAKGSVGDAYKVFG 111
P + ++ A R G +H K + F+ AL+ Y+ G + +A +F
Sbjct: 115 YPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE 174
Query: 112 EMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVS 167
+ E ++ W +++AY + ++ S +L L V + + I+S G+ V
Sbjct: 175 RIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVR 234
Query: 168 A--RELFDKMPNRDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
++ N + + +L++ Y+ G + KVF+EM +R+V +N +I G A
Sbjct: 235 GVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAV 294
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI-GYKGNM 282
+G + +E +K ++ +G +VP+ T V + ACS G +D G + +++ G + +
Sbjct: 295 HGFGQEGIELYKSLISQG-LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
L+D+ + G +E A + + + + W + + HG+
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 262/566 (46%), Gaps = 83/566 (14%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA-----AAAPLNHFTLPIVVR 60
+VF+ + +PN ++ A+ G + + V +F M + N ++
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 61 SCSKAGAV---REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
C + G+Q+HC+A + GF + L +L+E+Y+ + A +F EMPE N
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 118 VVVWTAMISAY-------------------------ISC----------GDVGSGRRLLD 142
VV W MI + ++C GDV +GRR+
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS 374
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL--------------- 187
P+ V W+ ++SGY A F +M +++ T L
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEG 434
Query: 188 ---------------NGYANSGDVGSF---------EKVFEE-MPERNVYSWNVLIGGYA 222
N + SG + + E +F++ + E ++ WN +I G+
Sbjct: 435 GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 494
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
N + AL F++M + PN+ + VL +CSRL +L G+ H GY +
Sbjct: 495 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS 554
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
FV AL DMY KCG I+SA F+ + R++ + WN MI+G +G +A+ L+ +M +S
Sbjct: 555 FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISS 614
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
E+PDG+TFV +L+AC+H GLV G SM + I P+++HY C+ D LGRAG L+
Sbjct: 615 GEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLED 674
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
A P + +V+W LL +CR H +V +A + L+ L+P++ A +V+LSN Y
Sbjct: 675 AEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSS 734
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCS 488
L +W D A L+ M K PG S
Sbjct: 735 LRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/598 (24%), Positives = 248/598 (41%), Gaps = 127/598 (21%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A +VFD MPE + +WN M + +V++ M P + FTL V+
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP-SRFTLASVLS 146
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGD-AYKVFGEMPERNVV 119
+CSK G + H VA K G N F+ AL+ MY+ G + D +VF + + N V
Sbjct: 147 ACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEV 206
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG--------------------- 158
+TA+I V ++ L E+ V + S+ +S
Sbjct: 207 SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNE 266
Query: 159 ---------------------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYA 191
Y ++ DM A +F +MP +V+SWN ++ G+
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 192 N-----------------------------------SGDVGSFEKVFEEMPERNVYSWNV 216
SGDV + ++F +P+ +V +WN
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNA 386
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
++ GY+ + +A+ F+QM + ++ P+ TL +L +C+RL L+ GK +H
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQ-NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 445
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSL 335
N + + LI +Y++C +E + +F +C++ DI WN+MI+G + AL L
Sbjct: 446 EISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALIL 505
Query: 336 FDQMKNSREQ-PDGVTFVGILSACTHM----------------GLVRDGFLYFQSMVDHY 378
F +M + P+ +F +LS+C+ + G V D F+ ++ D Y
Sbjct: 506 FRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE-TALTDMY 564
Query: 379 SIIPQIEHYGCMADLL---------------GRAGLLDQAVSFVRKM---PMEPDAVIWT 420
+I+ D + G G D+AV RKM +PD + +
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 421 SLLGACRTHKNVEIA-EL--AFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
S+L AC VE E+ + Q + +EP+ +++ + + GR +D +L A
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPE-LDHYICIVDCLGRAGRLEDAEKLAEA 681
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 56/407 (13%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G+ +H + G K +++LC L+++Y G A KVF EM R+V W A ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVSARELFDK-MPNR------ 178
GD+G + D PERDVV W+ +IS G+ E +V R + D +P+R
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 179 ---------------------------DVMSWNTLLNGYANSGDVGSFE-KVFEEMPERN 210
++ N LL+ YA G + + +VFE + + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV-----PNDFTLVAVLLACSRLGAL-- 263
S+ +IGG AR + +A++ F+ M +G V N ++ A C L +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 264 -DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
++GK +H A +G+ G++ + N+L+++YAK + A +F + +++SWN MI G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
+ ++ +M++S QP+ VT + +L AC G V G F S+ P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----P 379
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC 426
+ + M ++A+S R+M ++PD + +L +C
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 172/361 (47%), Gaps = 46/361 (12%)
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
++ + + D + + ++ YIE GD AR++FD+M RDV SWN L GD+G
Sbjct: 32 IVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEA 91
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+VF+ MPER+V SWN +I R G AL +K+M+ +G +P+ FTL +VL ACS+
Sbjct: 92 CEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDG-FLPSRFTLASVLSACSK 150
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG-VIESAVDVFNCLDRRDIISWNT 318
+ G H A G N+FVGNAL+ MYAKCG +++ V VF L + + +S+
Sbjct: 151 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 210
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS------AC-------------- 358
+I GLA +A+ +F M Q D V ILS C
Sbjct: 211 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 270
Query: 359 THMGLVRDGF---LYF-QSMVDHYSI-------------IPQIE--HYGCMADLLGRAGL 399
H +R GF L+ S+++ Y+ +P++ + M G+
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 330
Query: 400 LDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVML 456
D++V F+ +M +P+ V S+LGAC +VE F + +P A ML
Sbjct: 331 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP--QPSVSAWNAML 388
Query: 457 S 457
S
Sbjct: 389 S 389
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 251 VAVLLACSRLGALDM-GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+A LL C R + GK +H + +G K + ++ N L+D+Y +CG + A VF+ +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
RD+ SWN + G+ +A +FD M + D V++ ++S G +
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMP----ERDVVSWNNMISVLVRKGFEEKALV 124
Query: 370 YFQSMV 375
++ MV
Sbjct: 125 VYKRMV 130
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+ FD + NT WN M +GY + V L+ +M + P + T V+ +CS
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKP-DGITFVSVLTACS 631
Query: 64 KAGAVREG-------EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-E 115
+G V G +++H + + + ++C +++ G + DA K+ P +
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEP----ELDHYIC--IVDCLGRAGRLEDAEKLAEATPYK 685
Query: 116 RNVVVWTAMISAYISCGDVGSGRR----LLDLAPERDV--VMWSIVISGYIESGDMVSAR 169
+ V+W ++S+ GDV RR L+ L P+ V+ S S + D + +
Sbjct: 686 SSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQ 745
Query: 170 ELFDK--MPNRDVMSWNTLLNGYANSGDVG 197
L +K + SW T Y N D G
Sbjct: 746 GLMNKNRVHKTPGQSWTT----YGNDLDSG 771
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 256/556 (46%), Gaps = 72/556 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A+ +FD+M + + +WN M +GY+ + +++ L M P + T +
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP-DQQTFGASLS 253
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ G +HC K GF + L TALI MY
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY----------------------- 290
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-- 178
+ CG + R+L+ P +DVV W+++ISG + G A +F +M
Sbjct: 291 --------LKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 179 -------------------------------------DVMSWNTLLNGYANSGDVGSFEK 201
D + N+L+ YA G +
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+FE M ER++ SWN +I GYA+N AL F++M + + FT+V++L ACS G
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
AL +GK +H + V AL+DMY+KCG +E+A F+ + +D++SW +I
Sbjct: 463 ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIA 522
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
G HG AL ++ + +S +P+ V F+ +LS+C+H G+V+ G F SMV + +
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P EH C+ DLL RA ++ A F ++ P + +L ACR + E+ ++ +
Sbjct: 583 PNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICED 642
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
+IEL+P + ++V L + + + RW DV+ MR G +KLPG S IE N F+
Sbjct: 643 MIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFM 702
Query: 502 LDERHP-ETESIYRAL 516
H +T S+ + L
Sbjct: 703 NHTSHSDDTVSLLKLL 718
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 26/495 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HARKVF++M E + W AM YS + L EM P L ++
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML-- 154
Query: 61 SCSKAGAVREGEQVHCV---AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
V E Q+ C+ A GF + + +++ +Y VGDA +F +M +R+
Sbjct: 155 -----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 118 VVVWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGY---IESGDMVSA 168
+V W MIS Y S G++ +LL L P++ S+ +SG +E G M+
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
++ + D+ L+ Y G + +V E +P ++V W V+I G R GR
Sbjct: 270 -QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
AL F +ML G + ++ + +V+ +C++LG+ D+G VH Y GY + N+L
Sbjct: 329 KALIVFSEMLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL 387
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSREQPD 347
I MYAKCG ++ ++ +F ++ RD++SWN +I+G A + + AL LF++MK + +Q D
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
T V +L AC+ G + G L +V I P + D+ + G L+ A
Sbjct: 448 SFTVVSLLQACSSAGALPVGKL-IHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGR 465
+ + D V W L+ H +IA + + +EP + +LS+ +
Sbjct: 507 DSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565
Query: 466 WQDVARLKIAMRDTG 480
Q + +RD G
Sbjct: 566 QQGLKIFSSMVRDFG 580
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 208/439 (47%), Gaps = 21/439 (4%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
+T +N+ N S H+ V+ F+ M P + FT P ++++C+ + G +
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLP-DTFTFPSLLKACASLQRLSFGLSI 68
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H GF + ++ ++L+ +Y+ G + A KVF EM ER+VV WTAMI Y G V
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 135 GSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSAREL-----FDKMPNRDVMSWNT 185
G L++ + + V ++SG +E + + FD D+ N+
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDC----DIAVMNS 184
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+LN Y VG + +F++M +R++ SWN +I GYA G S+ L+ +M +G + P
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG-LRP 243
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ T A L + L+MG+ +H G+ +M + ALI MY KCG E++ V
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ +D++ W MI+GL G AL +F +M S ++++C +G
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 366 DGFLYFQSMVDH-YSI-IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
G ++ H Y++ P + + + + G LD+++ +M E D V W +++
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNS---LITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Query: 424 GACRTHKNVEIAELAFQHL 442
+ ++ A L F+ +
Sbjct: 420 SGYAQNVDLCKALLLFEEM 438
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
++L+N YA G + KVFEEM ER+V W +IG Y+R G +A +M +G +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG-I 143
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P TL+ +L + L + +H +A G+ ++ V N+++++Y KC + A D
Sbjct: 144 KPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F+ +++RD++SWNTMI+G A GN ++ L L +M+ +PD TF LS M
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 364 VRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ G L+ Q + + + ++ + + + G + + + +P D V WT +
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIP-NKDVVCWTVM 317
Query: 423 LGACRTHKNVEIAELAFQHLIE 444
+ E A + F +++
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQ 339
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 246/490 (50%), Gaps = 46/490 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR+VFD++ P+ +WN + Y + + VV+F +M PLNH T+ V+
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH-TVSSVML 271
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS++ A+ G+ +H +A K ++ + T++ +MY + A +VF + +++
Sbjct: 272 ACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
WT+ +S Y G R L DL PER++V W+ ++ GY+ + + A + M
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Query: 177 -----------------------------------NRDVMSWNTLLNGYANSGDVGSFEK 201
+ +V+ N LL+ Y G + S
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 202 VFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
F +M E R+ SWN L+ G AR GR AL F+ M VE P+ +TL +L C+ +
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK--PSKYTLATLLAGCANI 509
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
AL++GK +H + GYK ++ + A++DMY+KC + A++VF RD+I WN++I
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSII 569
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
G +G + + LF ++N +PD VTF+GIL AC G V GF YF SM Y I
Sbjct: 570 RGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHI 629
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
PQ+EHY CM +L + G L Q F+ MP +P + T + AC+ ++ ++ A +
Sbjct: 630 SPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Query: 441 HLIE---LEP 447
L+ L+P
Sbjct: 690 RLMNDHYLQP 699
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 234/499 (46%), Gaps = 58/499 (11%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++F++MPE + +WNA+ + +V +F MNR + V++SC
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRA-TETSFAGVLKSCG 173
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+R Q+HC K G+ N L T+++++Y + DA +VF E+ + V W
Sbjct: 174 LILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNV 233
Query: 124 MISAYISCG---------------------------DVGSGRRL------------LDLA 144
++ Y+ G + R L + L+
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
D V+ + V Y++ + SAR +FD+ ++D+ SW + ++GYA SG ++F+
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
MPERN+ SWN ++GGY + +AL+ M E + + N TLV +L CS + +
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN-VTLVWILNVCSGISDVQ 412
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGL 323
MGK H + GY N+ V NAL+DMY KCG ++SA F + RD +SWN ++ G+
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-----HMGLVRDGFLYFQSMVDHY 378
A G + ALS F+ M+ +P T +L+ C ++G GFL + D Y
Sbjct: 473 ARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFL----IRDGY 527
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAEL 437
I I G M D+ + D A+ V K D ++W S++ G CR ++ E+ EL
Sbjct: 528 KIDVVIR--GAMVDMYSKCRCFDYAIE-VFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 438 AFQHLIELEPKNPANFVML 456
L+E E P + L
Sbjct: 585 FM--LLENEGVKPDHVTFL 601
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 206/470 (43%), Gaps = 64/470 (13%)
Query: 33 RDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTA 92
+ V VLFA + P++++ + RSCS V + +V FL
Sbjct: 47 KAVSVLFA-----SPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNR 101
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMW 152
IE Y G V DA ++F EMPER+ W A+I+A G R+ V
Sbjct: 102 AIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRAT 161
Query: 153 SIVISGYIESGDMVSARELFDKMP----------NRDVMSWNTLLNGYANSGDVGSFEKV 202
+G ++S ++ L ++ N D+ + ++++ Y + +V
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET--SIVDVYGKCRVMSDARRV 219
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+E+ + SWNV++ Y G +A+ F +ML E +V P + T+ +V+LACSR A
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVRPLNHTVSSVMLACSRSLA 278
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L++GK +H A + + V ++ DMY KC +ESA VF+ +D+ SW + ++G
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 323 LAMHGNTADALSLFD-------------------------------QMKNSREQPDGVTF 351
AM G T +A LFD M+ E D VT
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 352 VGILSACT-----HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
V IL+ C+ MG GF+Y D I+ + D+ G+ G L A +
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHGY-DTNVIVAN-----ALLDMYGKCGTLQSANIW 452
Query: 407 VRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
R+M D V W +LL G R ++ + L+F +++E K P+ + +
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQ--ALSFFEGMQVEAK-PSKYTL 499
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 262/517 (50%), Gaps = 48/517 (9%)
Query: 18 TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV 77
TW AM +G + +F +M A P N T+ V +CS + +G +VH +
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVP-NAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 78 AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG 137
A K GF + + +L++MYS CG +
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYS-------------------------------KCGKLEDA 406
Query: 138 RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNGYANS 193
R++ D +DV W+ +I+GY ++G A ELF +M + + +++WNT+++GY +
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 194 GDVGSFEKVFEEMP-----ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
GD G +F+ M +RN +WN++I GY +NG+ +ALE F++M +PN
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF-SRFMPNSV 525
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
T++++L AC+ L M + +H V NAL D YAK G IE + +F +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 309 DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF 368
+ +DII+WN++I G +HG+ AL+LF+QMK P+ T I+ A MG V +G
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 369 LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRT 428
F S+ + Y IIP +EH M L GRA L++A+ F+++M ++ + IW S L CR
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 429 HKNVEIAELAFQHLIELEPKNPANFVMLSNIY---KDLGRWQDVARLKIAMRDTGFRKLP 485
H ++++A A ++L LEP+N A ++S IY LGR + + + RD +K
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPL 762
Query: 486 GCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
G S IE + + F + D+ T+ +Y + ++ L
Sbjct: 763 GQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRL 799
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 44/437 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARKVFD M E N TW+AM YS R+V LF M + P + F P +++
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP-DDFLFPKILQ 189
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ G V G+ +H V K G M S + V
Sbjct: 190 GCANCGDVEAGKVIHSVVIKLG-------------MSSC------------------LRV 218
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
++++ Y CG++ + ERDV+ W+ V+ Y ++G A EL +M +
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 181 ----MSWNTLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLIGGYARNGRFSDALE 232
++WN L+ GY G + + ++M +V++W +I G NG AL+
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M + G VVPN T+++ + ACS L ++ G VH A +G+ ++ VGN+L+DMY
Sbjct: 339 MFRKMFLAG-VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG +E A VF+ + +D+ +WN+MI G G A LF +M+++ +P+ +T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
++S G + FQ M + + + + G D+A+ RKM
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 413 E---PDAVIWTSLLGAC 426
P++V SLL AC
Sbjct: 518 SRFMPNSVTILSLLPAC 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 106/275 (38%), Gaps = 42/275 (15%)
Query: 2 GHARKVFDKMP-----EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
G A +F +M + NTATWN + GY + + LF +M + P N T+
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP-NSVTIL 528
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++ +C+ + ++H +R + AL + Y+ G + + +F M +
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+++ W ++I Y+ G G L + + + P
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT-------------------------P 623
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDAL 231
NR +S L +G G+V +KVF + + + ++ Y R R +AL
Sbjct: 624 NRGTLSSIILAHGLM--GNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+ ++M ++ + + L C G +DM
Sbjct: 682 QFIQEMNIQSETP----IWESFLTGCRIHGDIDMA 712
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 232/428 (54%), Gaps = 9/428 (2%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G+QVH K G + + ++L +YS GS+ ++YK+F +P ++ W +MIS +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 131 CG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDKMPNRDVMS 182
G +G +LD D + V++ + +E+ ++ +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+ L+N Y+ G + +V++ +PE + S + LI GY+++G D F+ M++ G
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ + F + ++L A + +G VH Y IG VG++L+ MY+K G I+
Sbjct: 649 TM-DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
F+ ++ D+I+W +I A HG +AL +++ MK +PD VTFVG+LSAC+H G
Sbjct: 708 KAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGG 767
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
LV + + + SMV Y I P+ HY CM D LGR+G L +A SF+ M ++PDA++W +L
Sbjct: 768 LVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL 827
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L AC+ H VE+ ++A + IELEP + ++ LSNI ++G W +V + M+ TG +
Sbjct: 828 LAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQ 887
Query: 483 KLPGCSVI 490
K PG S +
Sbjct: 888 KEPGWSSV 895
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 221/496 (44%), Gaps = 54/496 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF ++P P+ +W M +GY+ + + +F EM R + +N+ T+ V+
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVIS 359
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE---RN 117
+C + V E QVH K GF +S + ALI MYS G + + +VF ++ + +N
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 118 VVVWTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSAREL 171
+V MI+++ G RL L + V + + + G V L
Sbjct: 420 IV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL 477
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ D+ ++L Y+ G + K+F+ +P ++ W +I G+ G +A+
Sbjct: 478 KSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F +ML +G P++ TL AVL CS +L GK +H Y G M +G+AL++M
Sbjct: 537 GLFSEMLDDG-TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG ++ A V++ L D +S +++I+G + HG D LF M S D
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 352 VGILSAC----------------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA---- 391
IL A T +GL + + S++ YS I+ C A
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG-SSLLTMYSKFGSIDD-CCKAFSQI 713
Query: 392 ---DLL------------GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
DL+ G+A Q + +++ +PD V + +L AC VE +
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 437 LAFQHLIE---LEPKN 449
+++ +EP+N
Sbjct: 774 FHLNSMVKDYGIEPEN 789
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 199/440 (45%), Gaps = 33/440 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A K+FD +P+P+ + N M +GY + + F++M+ N + V+
Sbjct: 100 MADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA-NEISYGSVIS 158
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS A E V C K G+ + + +ALI+++S DAYKVF + NV
Sbjct: 159 ACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYC 218
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISG-----YIESGDMVSA 168
W +I+ + + G+ + DL E D +S V++ + G +V A
Sbjct: 219 WNTIIAGALRNQNYGA---VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQA 275
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R + K DV +++ YA G + +VF +P +V SW V++ GY ++
Sbjct: 276 RVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
ALE FK+M G V N+ T+ +V+ AC R + VH + G+ + V AL
Sbjct: 334 SALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 289 IDMYAKCGVIESAVDVFNCLD---RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
I MY+K G I+ + VF LD R++I+ N MI + A+ LF +M +
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 346 PDGVTFVGILSA--CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
D + +LS C ++G G+ +V ++ + L + G L+++
Sbjct: 451 TDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEES 504
Query: 404 VSFVRKMPMEPDAVIWTSLL 423
+ +P + +A W S++
Sbjct: 505 YKLFQGIPFKDNAC-WASMI 523
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 183/427 (42%), Gaps = 61/427 (14%)
Query: 85 WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLA 144
++ FL +L+ YS GS+ DA K+F +P+ +VV MIS Y RL + +
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGY-------KQHRLFEES 134
Query: 145 PERDVVMWSIVI-SGYIESGDMVSARELFDKMPNRDVMSWNTLLNGY-----ANSGDVGS 198
M + + I G ++SA +++ +T+ GY S +
Sbjct: 135 LRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDV 194
Query: 199 FEK---------VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
F K VF + NVY WN +I G RN + + F +M V G P+ +T
Sbjct: 195 FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV-GFQKPDSYT 253
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+VL AC+ L L GK V G + ++FV A++D+YAKCG + A++VF+ +
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
++SW M++G + AL +F +M++S + + T ++SAC +V
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV----- 367
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
C A Q ++V K D+ + +L+
Sbjct: 368 -------------------CEA---------SQVHAWVFKSGFYLDSSVAAALISMYSKS 399
Query: 430 KNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR--KLPGC 487
+++++E F+ L +++ +N N ++ S + + RL M G R + C
Sbjct: 400 GDIDLSEQVFEDLDDIQRQNIVNVMITS--FSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 488 SVIECND 494
S++ D
Sbjct: 458 SLLSVLD 464
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 278/541 (51%), Gaps = 22/541 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHR-DVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
AR+VFD+M + +WN++ +G S + + VV+F +M R L+H + V+ +C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTC 286
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ Q+H + KRG++ + L+ YS G + VF +M ERNVV WT
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 123 AMISAYISCG-DVGSGRRLLDLAPERDV---VMWSIVISGYIESGDMVSA---RELFDKM 175
MIS+ + R + P ++ ++ + I+ G + + F
Sbjct: 347 TMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSE 406
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
P+ N+ + YA + +K FE++ R + SWN +I G+A+NG +AL+ F
Sbjct: 407 PSVG----NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF- 461
Query: 236 QMLVEGDVVPNDFTLVAVL--LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+ + +PN++T +VL +A + ++ G+ H + +G V +AL+DMYA
Sbjct: 462 -LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYA 520
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
K G I+ + VFN + +++ W ++I+ + HG+ ++LF +M PD VTF+
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L+AC G+V G+ F M++ Y++ P EHY CM D+LGRAG L +A + ++P
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG 640
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
P + S+LG+CR H NV++ + +E++P+ ++V + NIY + W A ++
Sbjct: 641 PGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIR 700
Query: 474 IAMRDTGFRKLPGCSVIECND-----SVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
AMR K G S I+ D ++ F S D+ HP+++ IYR + + + + L G
Sbjct: 701 KAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGK 760
Query: 529 V 529
V
Sbjct: 761 V 761
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 201/460 (43%), Gaps = 46/460 (10%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F+ + +P+ +WN + +G+ + + VV ++A + FT + C +
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQIALNFVVRM----KSAGVVFDAFTYSTALSFCVGSE 188
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
G Q+ K G + + + + I MYS GS A +VF EM ++++ W +++S
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 127 AYISCGDVGSG-----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
G G R ++ E D V ++ VI+ D+ AR++ R
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 182 SW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
S N L++ Y+ G + + + VF +M ERNV SW +I DA+ F M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNM 363
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+G V PN+ T V ++ A + G +H G+ VGN+ I +YAK
Sbjct: 364 RFDG-VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+E A F + R+IISWN MI+G A +G + +AL +F + P+ TF +L+A
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNA 481
Query: 358 CT-------------HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
H L++ G + P + + D+ + G +D++
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLGL----------NSCPVVS--SALLDMYAKRGNIDESE 529
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+M + + +WTS++ A +H + E F +I+
Sbjct: 530 KVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 185/383 (48%), Gaps = 35/383 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRD-----VVVLFAEMNRAA--AAPLNHFTLP 56
A K+FD + N T +S++ES R + +F E + ++ TL
Sbjct: 27 AHKLFDGSSQRNATTSI----NHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC 82
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC--TALIEMYSAKGSVGDAYKVFGEMP 114
+ +++C G ++ G Q+H + GF SF+C A++ MY G +A +F +
Sbjct: 83 LALKACR--GDLKRGCQIHGFSTTSGF--TSFVCVSNAVMGMYRKAGRFDNALCIFENLV 138
Query: 115 ERNVVVWTAMISAY----ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+ +VV W ++S + I+ V R+ D +S +S + S + +
Sbjct: 139 DPDVVSWNTILSGFDDNQIALNFV---VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 171 LFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
L + D++ N+ + Y+ SG +VF+EM +++ SWN L+ G ++ G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 227 FS-DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
F +A+ F+ M+ EG V + + +V+ C L + + +H GY+ + VG
Sbjct: 256 FGFEAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
N L+ Y+KCGV+E+ VF+ + R+++SW TMI+ N DA+S+F M+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVY 369
Query: 346 PDGVTFVGILSACTHMGLVRDGF 368
P+ VTFVG+++A +++G
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGL 392
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 275/533 (51%), Gaps = 53/533 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KV D+MPE A+ NA +G RD +F + R + + +N T+ V+ C
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDA-RVSGSGMNSVTVASVLGGC- 142
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G + G Q+HC+A K GF+ ++ T+L+ MYS G A ++F ++P ++VV + A
Sbjct: 143 --GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 124 MISAYISCG------------------------------------DVGSGRRLLDLAPER 147
IS + G ++ GR+L L ++
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 148 DVVMWSIV----ISGYIESGDMVSARELFDKMPN-RDVMSWNTLLNGYANSGD----VGS 198
+ ++V I Y + SA +F ++ + R+++SWN++++G +G V
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVEL 320
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
FEK+ E + + +WN LI G+++ G+ +A + F++ML +VP+ L ++L ACS
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSACS 379
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR--DIISW 316
+ L GK +H + + ++FV +LIDMY KCG+ A +F+ + + D + W
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N MI+G HG A+ +F+ ++ + +P TF +LSAC+H G V G F+ M +
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
Y P EH GCM DLLGR+G L +A + +M +V +SLLG+CR H + + E
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGE 558
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSV 489
A L ELEP+NPA FV+LS+IY L RW+DV ++ + KLPG S+
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 175/351 (49%), Gaps = 12/351 (3%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N FT P +++SC+K G V +G +H K GF + F TAL+ MY V DA KV
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS------GYIESGD 164
EMPER + A +S + G R+ A M S+ ++ G IE G
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ + +V +L++ Y+ G+ ++FE++P ++V ++N I G N
Sbjct: 150 QLHCLAMKSGF-EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G + F M PND T V + AC+ L L G+ +H ++ V
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 285 GNALIDMYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
G ALIDMY+KC +SA VF L D R++ISWN++I+G+ ++G A+ LF+++ +
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+PD T+ ++S + +G V + F +F+ M+ ++P ++ C+ LL
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLS-VVMVPSLK---CLTSLL 375
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN FT +L +C++LG + G+ +H G+ ++F AL+ MY K + A+ V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC------ 358
+ + R I S N ++GL +G DA +F + S + VT +L C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 359 --THMGLVRDGF---LYF-QSMVDHYS----------IIPQIEHYGCMADLLGRAGLLDQ 402
H ++ GF +Y S+V YS + ++ H + +GL++
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 403 AV--------SFVRKMPM-EPDAVIWTSLLGACRTHKNVE 433
V + +RK EP+ V + + + AC + N++
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ 248
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 275/537 (51%), Gaps = 12/537 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +V + E + W ++ +G+ ++ V F EM P N+FT ++
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP-NNFTYSAILS 333
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMY-SAKGSVGDAYKVFGEMPERNVV 119
CS ++ G+Q+H K GF+ ++ + AL++MY S +A +VFG M NVV
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVV 393
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARE-------L 171
WT +I + G V LL +R+V + +SG + + + R L
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ + +++ N+L++ YA+S V V M R+ ++ L+ + G+ AL
Sbjct: 454 LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
M +G + + +L + A + LGAL+ GK +H Y+ G+ G V N+L+DM
Sbjct: 514 SVINYMYGDG-IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDM 572
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG +E A VF + D++SWN +++GLA +G + ALS F++M+ +PD VTF
Sbjct: 573 YSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTF 632
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +LSAC++ L G YFQ M Y+I PQ+EHY + +LGRAG L++A V M
Sbjct: 633 LILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH 692
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
++P+A+I+ +LL ACR N+ + E + L P +PA +++L+++Y + G+ + +
Sbjct: 693 LKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQK 752
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD-ERHPETESIYRALRGLTMLLRLHG 527
+ M + K G S +E V F S D R +T IY + + ++ G
Sbjct: 753 TRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG 809
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 207/430 (48%), Gaps = 14/430 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FD+M W M + ++ ++ + LF EM + P N FT VVRSC
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHP-NEFTFSSVVRSC 134
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + G +VH K GF+ NS + ++L ++YS G +A ++F + + + WT
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 123 AMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGY--IESGDMVSARELFDK 174
MIS+ + + + P + + S + +E G + + +
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRG 254
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+P +V+ +L++ Y+ + +V E++V+ W ++ G+ RN R +A+ F
Sbjct: 255 IP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M G + PN+FT A+L CS + +LD GK +H +G++ + VGNAL+DMY K
Sbjct: 314 LEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 295 CGVIE-SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
C E A VF + +++SW T+I GL HG D L +M +P+ VT G
Sbjct: 373 CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+ + VR L + + + ++ + D + +D A + +R M
Sbjct: 433 VLRACSKLRHVRR-VLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-R 490
Query: 414 PDAVIWTSLL 423
D + +TSL+
Sbjct: 491 RDNITYTSLV 500
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 12/314 (3%)
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F + N D+ N LL+ Y + + + K+F+EM R V++W V+I + ++ F+ AL
Sbjct: 52 FGLLENLDL--CNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASAL 109
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F++M+ G PN+FT +V+ +C+ L + G VH G++GN VG++L D+
Sbjct: 110 SLFEEMMASG-THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG + A ++F+ L D ISW MI+ L +AL + +M + P+ TF
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
V +L A + +GL ++ +V I + + D + ++ AV V
Sbjct: 229 VKLLGASSFLGLEFGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVR-VLNSS 285
Query: 412 MEPDAVIWTSLL-GACRTHKNVE-IAELAFQHLIELEPKNPANFVMLSNIYK----DLGR 465
E D +WTS++ G R + E + + L+P N +LS D G+
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 466 WQDVARLKIAMRDT 479
+K+ D+
Sbjct: 346 QIHSQTIKVGFEDS 359
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 190/461 (41%), Gaps = 87/461 (18%)
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
I + S ++ + R G +HC K G N LC L+ +Y K G
Sbjct: 28 IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLY---------LKTDG----- 73
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
+W A R+L D R V W+++IS + +S + SA LF++M
Sbjct: 74 ---IWNA--------------RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 176 -----PN--------------RDV-------------------MSWNTLLNGYANSGDVG 197
PN RD+ + ++L + Y+ G
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
++F + + SW ++I ++ +AL+ + +M V+ V PN+FT V +L A
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGAS 235
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
S LG L+ GK +H G N+ + +L+D Y++ +E AV V N +D+ W
Sbjct: 236 SFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWT 294
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
++++G + +A+ F +M++ QP+ T+ ILS C+ VR L F +
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS---AVRS--LDFGKQIHS 349
Query: 378 YSIIPQIEHY----GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
+I E + D+ + + S V + P+ V WT+L+ H V+
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 434 IAELAFQHLI--ELEPKNPANFVMLSNIYKDLGRWQDVARL 472
++ E+EP N V LS + + + + V R+
Sbjct: 410 DCFGLLMEMVKREVEP----NVVTLSGVLRACSKLRHVRRV 446
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 241/474 (50%), Gaps = 24/474 (5%)
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
+H + K GF ++F L+ Y + A K+F EM E NVV WT++IS Y D
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY---ND 107
Query: 134 VGSGRRLLDL---------APERDVVMWSI--VISGYIES--GDMVSARELFDKMPNRDV 180
+G + L + P + S+ S ES G + AR + R++
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGL-RRNI 166
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSDALEAFKQM- 237
+ ++L++ Y DV + +VF+ M RNV SW +I YA+N R +A+E F+
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFN 226
Query: 238 -LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+ D N F L +V+ ACS LG L GK H GY+ N V +L+DMYAKCG
Sbjct: 227 AALTSDR-ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
+ A +F + +IS+ +MI A HG A+ LFD+M R P+ VT +G+L
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM--EP 414
AC+H GLV +G Y M + Y ++P HY C+ D+LGR G +D+A + + + E
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
A++W +LL A R H VEI A + LI+ + + ++ LSN Y G W+D L++
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
M+ +G K CS IE DSV F++ D E+ I R L+ L ++ G+
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGH 519
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 25/344 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+M EPN +W ++ +GY+ ++ + +F +M+ P N +T V ++CS
Sbjct: 83 ARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS 142
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVVW 121
R G+ +H G + N + ++L++MY V A +VF M RNVV W
Sbjct: 143 ALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSW 202
Query: 122 TAMISAYISCGDVGSGRRLLDL---------APERDVVMWSIVIS-----GYIESGDMVS 167
T+MI+AY G ++L + + M + VIS G ++ G +
Sbjct: 203 TSMITAY---AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ V++ +LL+ YA G + EK+F + +V S+ +I A++G
Sbjct: 260 GLVTRGGYESNTVVA-TSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLG 318
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
A++ F +M V G + PN TL+ VL ACS G ++ G +++ + AE G +
Sbjct: 319 EAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT 377
Query: 287 ALIDMYAKCGVIESAVDVFNCLD---RRDIISWNTMINGLAMHG 327
++DM + G ++ A ++ ++ + + W +++ +HG
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 15/270 (5%)
Query: 4 ARKVFDKMPE--PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAP-LNHFTLPIVVR 60
AR+VFD M N +W +M Y+ + + LF N A + N F L V+
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVIS 244
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS G ++ G+ H + + G++ N+ + T+L++MY+ GS+ A K+F + +V+
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS 304
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDV---VMWSIVISGYIESG-DMVS-AR 169
+T+MI A G + +L D + P V+ + SG + G + +S
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMA 364
Query: 170 ELFDKMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
E + +P+ R +L + + K E E+ W L+ +GR
Sbjct: 365 EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
EA K+++ V + + ++ A S
Sbjct: 425 IVSEASKRLIQSNQQVTSAYIALSNAYAVS 454
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/565 (26%), Positives = 276/565 (48%), Gaps = 46/565 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F +M + +WN + GY+ LF + + T+ ++ C+
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 64 KAGAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + G+++H + + ++ + ALI Y+ G AY F M ++++ W
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 123 AMISAY-----------------------------------ISCGDVGSGRRLLD----- 142
A++ A+ I+ +G + +
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 143 --LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-DVMSWNTLLNGYANSGDVGSF 199
L E + + + ++ Y + G++ A ++F + R ++S+N+LL+GY NSG
Sbjct: 462 GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDA 521
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+ +F EM ++ +W++++ YA + ++A+ F+++ G + PN T++ +L C++
Sbjct: 522 QMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG-MRPNTVTIMNLLPVCAQ 580
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
L +L + + H Y G G++ + L+D+YAKCG ++ A VF RRD++ + M
Sbjct: 581 LASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAM 639
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
+ G A+HG +AL ++ M S +PD V +L+AC H GL++DG + S+ +
Sbjct: 640 VAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHG 699
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ P +E Y C DL+ R G LD A SFV +MP+EP+A IW +LL AC T+ +++
Sbjct: 700 MKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVA 759
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
HL++ E + N V++SN+Y +W+ V L+ M+ +K GCS +E + F
Sbjct: 760 NHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVF 819
Query: 500 YSLDERHPETESIYRALRGLTMLLR 524
S D HP +SI+ + L + ++
Sbjct: 820 VSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 15/338 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +K+F +M + WN + G S++ R+ + F M+ A + T IV+
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSV-GDAYKVFGEMPERNVV 119
C + G G+ +H K G + ++ + AL+ MY+ G + DAY F + +++VV
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 120 VWTAMISAYISCGDVGSGRRLLDL------APERDVVMWSIVISGYIESGDMV-SARELF 172
W A+I+ + + R L P + + + ++ S R++
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 173 DKMPNRD-----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ R V N+L++ Y G + +F M +++ SWNV+I GYA N +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGN 286
A + F ++ +GDV P+ T++++L C++L L GK +H Y Y + VGN
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
ALI YA+ G +A F+ + +DIISWN +++ A
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 219/505 (43%), Gaps = 64/505 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A FD + + + +WNA+ G+S D F M + P N+ T+ V+ C+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP-NYATIANVLPVCA 235
Query: 64 ---KAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
K A R G Q+H +R + + F+C +L+ Y G + +A +F M +++V
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 120 VWTAMISAYIS-CGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDK 174
W +I+ Y S C + + +L + DV S+ I + + D+ S +E+
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ D N L++ YA GD + F M +++ SWN ++ +A + +
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY---KGNMFVGN 286
L +L E + + T++++L C + + K VH Y+ G + +GN
Sbjct: 416 FLNLLHHLLNEA-ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN 474
Query: 287 ALIDMYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNS--- 342
AL+D YAKCG +E A +F L +RR ++S+N++++G G+ DA LF +M +
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534
Query: 343 ----------------------RE------QPDGVTFVGILSACTHMG---LVRD--GFL 369
RE +P+ VT + +L C + LVR G++
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ D I G + D+ + G L A S V + D V++T+++ H
Sbjct: 595 IRGGLGD-------IRLKGTLLDVYAKCGSLKHAYS-VFQSDARRDLVMFTAMVAGYAVH 646
Query: 430 KNVEIAELAFQHLIELEPKNPANFV 454
+ A + + H+ E K F+
Sbjct: 647 GRGKEALMIYSHMTESNIKPDHVFI 671
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 175/389 (44%), Gaps = 16/389 (4%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
+H VV++C+ + G +H K G S + +++ MY+ + D K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 111 GEMPERNVVVWTAMISAY-ISCG-DVGSGRRLLDLA--PERDVVMWSIVISGYIESGDMV 166
+M + VVW +++ +SCG + + + A P+ V ++IV+ + GD
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 167 SARELFDKMPN----RDVMSWNTLLNGYANSGDV-GSFEKVFEEMPERNVYSWNVLIGGY 221
+ + + + +D + N L++ YA G + F+ + +++V SWN +I G+
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG---ALDMGKWVHVYAESIGY 278
+ N +DA +F ML E PN T+ VL C+ + A G+ +H Y +
Sbjct: 200 SENNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 279 -KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+ ++FV N+L+ Y + G IE A +F + +D++SWN +I G A + A LF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 338 QMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+ + + PD VT + IL C + + G ++ H ++ + R
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G A M + D + W ++L A
Sbjct: 379 FGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 8/279 (2%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN-GRFSDALEAFKQMLVEGD 242
++LN YA + +K+F +M + WN+++ G + + GR + + FK M +
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADE 117
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI-ESA 301
P+ T VL C RLG GK +H Y G + + VGNAL+ MYAK G I A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
F+ + +D++SWN +I G + + ADA F M +P+ T +L C M
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 362 G---LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
R G +V + + + R G +++A S +M D V
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVS 296
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
W ++ ++ A F +L+ +P + ++S
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
V+ AC+ + L G+ +H +G+ V ++++MYAKC ++ +F +D D
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYF 371
+ WN ++ GL++ + + F M + E +P VTF +L C +G +G
Sbjct: 87 PVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG---- 141
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---------MEPDAVIWTSL 422
+SM H II G D L L+ F P + D V W ++
Sbjct: 142 KSM--HSYIIKA----GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+ + + A +F +++ EP P N+ ++N+
Sbjct: 196 IAGFSENNMMADAFRSFCLMLK-EPTEP-NYATIANV 230
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 196/342 (57%), Gaps = 7/342 (2%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
DV N L++ Y KVF+EM ERNV SWN ++ NG+ + E F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM- 205
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+ P++ T+V +L AC G L +GK VH + N +G AL+DMYAK G +
Sbjct: 206 IGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGL 263
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVGILSA 357
E A VF + +++ +W+ MI GLA +G +AL LF +M K S +P+ VTF+G+L A
Sbjct: 264 EYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+H GLV DG+ YF M + I P + HYG M D+LGRAG L++A F++KMP EPDAV
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 418 IWTSLLGACRTHKNVE---IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+W +LL AC H + + I E + LIELEPK N V+++N + + W + A ++
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRR 443
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
M++T +K+ G S +E S F+S + E SIY L
Sbjct: 444 VMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 166/342 (48%), Gaps = 15/342 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR + + +TWN + GYS ++S + + +++EM R P N T P +++
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKP-NKLTFPFLLK 121
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ + G Q+ K GF ++ ++ LI +Y DA KVF EM ERNVV
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 121 WTAMISAYISCGDVG---------SGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL 171
W ++++A + G + G+R E +V+ G + G +V ++ +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRF--CPDETTMVVLLSACGGNLSLGKLVHSQVM 239
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ + L++ YA SG + VFE M ++NV++W+ +I G A+ G +AL
Sbjct: 240 VREL-ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALID 290
+ F +M+ E V PN T + VL ACS G +D G K+ H + K M A++D
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 291 MYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTAD 331
+ + G + A D + D + W T+++ ++H + D
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDD 400
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
+WN+L GY+ + +++ + +M G + PN T +L AC+ L G+ + V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G+ +++VGN LI +Y C A VF+ + R+++SWN+++ L +G
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC--- 389
F +M R PD T V +LSAC G L +V ++ ++E C
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSAC-------GGNLSLGKLVHSQVMVRELE-LNCRLG 250
Query: 390 --MADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
+ D+ ++G L+ A +M D +WT
Sbjct: 251 TALVDMYAKSGGLEYARLVFERM---VDKNVWT 280
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 252/525 (48%), Gaps = 49/525 (9%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
WN + Y + ++ V ++ M + + FT P V+++C+ G VH
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
+ N ++C ALI MY G V A ++F M ER+ V W A+I+ Y S +G
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 139 RLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV-------------- 180
+LLD E +V W+ + G +E+G+ + A M N +V
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 181 -----MSW----------------------NTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+ W N+L+ Y+ D+ VF+++ ++ +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN +I G+A N R + K+ML+ G PN TL ++L +R+G L GK H Y
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 274 -ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
YK + + N+L+DMYAK G I +A VF+ + +RD +++ ++I+G G A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
L+ F M S +PD VT V +LSAC+H LVR+G F M + I ++EHY CM D
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH-LIELEPKNPA 451
L RAG LD+A +P EP + + +LL AC H N I E A L+E +P++
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
++++L+++Y G W + +K + D G +K +++E + +
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 212/517 (41%), Gaps = 94/517 (18%)
Query: 8 FDKMPEPNTATWNA---------MFNGYSLTESHRDVVVLFAEMNRAAAAPLNH----FT 54
+ ++P P + T +FN + SH + F + +H ++
Sbjct: 26 WKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYS 85
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
++ +C G+Q+H G +++S L L+ YSA + +A +
Sbjct: 86 SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSE 145
Query: 115 ERNVVVWTAMISAYI--------------------------------SCG---DVGSGRR 139
+ + W +I +YI +C D GR
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 140 L---LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
+ ++++ R ++ + + +IS Y G + AR LFD+M RD +SWN ++N Y +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 196 VGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
+G K+ + M E ++ +WN + GG G + AL M +V ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMI 324
Query: 252 AVLLACSRLGALDMGKWVH-VYAESIGYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD 309
L ACS +GAL GK H + S + ++ V N+LI MY++C + A VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV----- 364
+ +WN++I+G A + + + L +M S P+ +T IL +G +
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 365 -----------RDGFLYFQSMVDHYSIIPQI---------------EHYGCMADLLGRAG 398
+D + + S+VD Y+ +I Y + D GR G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 399 LLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNV 432
+ A+++ + M ++PD V ++L AC +H N+
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 48/373 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM------------NRAAAAPL- 50
AR++FD+M E + +WNA+ N Y+ E + L M N A L
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 51 --NHF-TLPIVV------------------RSCSKAGAVREGEQVHCVAAKR-GFKWN-S 87
N+ L VV ++CS GA++ G+ HC+ + F +
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS--AYISCGDVGSG--RRLLDL 143
+ +LI MYS + A+ VF ++ ++ W ++IS AY + S + +L
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 144 APERDVVMWSIVISGYIESGDMVSARELFDKMPNRD-----VMSWNTLLNGYANSGDVGS 198
+ + + ++ + G++ +E + R ++ WN+L++ YA SG++ +
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 477
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++VF+ M +R+ ++ LI GY R G+ AL FK M G + P+ T+VAVL ACS
Sbjct: 478 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG-IKPDHVTMVAVLSACS 536
Query: 259 RLGALDMGKWVHVYAESI-GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW- 316
+ G W+ E + G + + + ++D+Y + G ++ A D+F+ + +
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC 596
Query: 317 NTMINGLAMHGNT 329
T++ +HGNT
Sbjct: 597 ATLLKACLIHGNT 609
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA VF ++ + +TWN++ +G++ E + L EM + P NH TL ++
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP-NHITLASILP 431
Query: 61 SCSKAGAVREGEQVHCVAAKR-GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++ G ++ G++ HC +R +K L +L++MY+ G + A +VF M +R+ V
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDV-------VMWSIVISGYIESGDMVSARELF 172
+T++I Y G +G G L + D V V+S S + LF
Sbjct: 492 TYTSLIDGY---GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
KM E VF YS ++ Y R G A +
Sbjct: 549 TKM------------------------EHVFGIRLRLEHYS--CMVDLYCRAGYLDKARD 582
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW------VHVYAESIGYKGNMFVGN 286
F + E P+ +L AC G ++G+W + E +G+
Sbjct: 583 IFHTIPYE----PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHY------M 632
Query: 287 ALIDMYAKCGVIESAVDV 304
L DMYA G V V
Sbjct: 633 LLADMYAVTGSWSKLVTV 650
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 252/525 (48%), Gaps = 49/525 (9%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
WN + Y + ++ V ++ M + + FT P V+++C+ G VH
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
+ N ++C ALI MY G V A ++F M ER+ V W A+I+ Y S +G
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 139 RLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV-------------- 180
+LLD E +V W+ + G +E+G+ + A M N +V
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 181 -----MSW----------------------NTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+ W N+L+ Y+ D+ VF+++ ++ +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN +I G+A N R + K+ML+ G PN TL ++L +R+G L GK H Y
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 274 -ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
YK + + N+L+DMYAK G I +A VF+ + +RD +++ ++I+G G A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
L+ F M S +PD VT V +LSAC+H LVR+G F M + I ++EHY CM D
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH-LIELEPKNPA 451
L RAG LD+A +P EP + + +LL AC H N I E A L+E +P++
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
++++L+++Y G W + +K + D G +K +++E + +
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 212/517 (41%), Gaps = 94/517 (18%)
Query: 8 FDKMPEPNTATWNA---------MFNGYSLTESHRDVVVLFAEMNRAAAAPLNH----FT 54
+ ++P P + T +FN + SH + F + +H ++
Sbjct: 26 WKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYS 85
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
++ +C G+Q+H G +++S L L+ YSA + +A +
Sbjct: 86 SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSE 145
Query: 115 ERNVVVWTAMISAYI--------------------------------SCG---DVGSGRR 139
+ + W +I +YI +C D GR
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 140 L---LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
+ ++++ R ++ + + +IS Y G + AR LFD+M RD +SWN ++N Y +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 196 VGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
+G K+ + M E ++ +WN + GG G + AL M +V ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMI 324
Query: 252 AVLLACSRLGALDMGKWVH-VYAESIGYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD 309
L ACS +GAL GK H + S + ++ V N+LI MY++C + A VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV----- 364
+ +WN++I+G A + + + L +M S P+ +T IL +G +
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 365 -----------RDGFLYFQSMVDHYSIIPQI---------------EHYGCMADLLGRAG 398
+D + + S+VD Y+ +I Y + D GR G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 399 LLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNV 432
+ A+++ + M ++PD V ++L AC +H N+
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 48/373 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM------------NRAAAAPL- 50
AR++FD+M E + +WNA+ N Y+ E + L M N A L
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 51 --NHF-TLPIVV------------------RSCSKAGAVREGEQVHCVAAKR-GFKWN-S 87
N+ L VV ++CS GA++ G+ HC+ + F +
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS--AYISCGDVGSG--RRLLDL 143
+ +LI MYS + A+ VF ++ ++ W ++IS AY + S + +L
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 144 APERDVVMWSIVISGYIESGDMVSARELFDKMPNRD-----VMSWNTLLNGYANSGDVGS 198
+ + + ++ + G++ +E + R ++ WN+L++ YA SG++ +
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 477
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++VF+ M +R+ ++ LI GY R G+ AL FK M G + P+ T+VAVL ACS
Sbjct: 478 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG-IKPDHVTMVAVLSACS 536
Query: 259 RLGALDMGKWVHVYAESI-GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW- 316
+ G W+ E + G + + + ++D+Y + G ++ A D+F+ + +
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC 596
Query: 317 NTMINGLAMHGNT 329
T++ +HGNT
Sbjct: 597 ATLLKACLIHGNT 609
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA VF ++ + +TWN++ +G++ E + L EM + P NH TL ++
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP-NHITLASILP 431
Query: 61 SCSKAGAVREGEQVHCVAAKR-GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++ G ++ G++ HC +R +K L +L++MY+ G + A +VF M +R+ V
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDV-------VMWSIVISGYIESGDMVSARELF 172
+T++I Y G +G G L + D V V+S S + LF
Sbjct: 492 TYTSLIDGY---GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
KM E VF YS ++ Y R G A +
Sbjct: 549 TKM------------------------EHVFGIRLRLEHYS--CMVDLYCRAGYLDKARD 582
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW------VHVYAESIGYKGNMFVGN 286
F + E P+ +L AC G ++G+W + E +G+
Sbjct: 583 IFHTIPYE----PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHY------M 632
Query: 287 ALIDMYAKCGVIESAVDV 304
L DMYA G V V
Sbjct: 633 LLADMYAVTGSWSKLVTV 650
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 257/495 (51%), Gaps = 13/495 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD PE + WN++ Y+ V+ LF+++ R+ P N FT + R S
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDN-FTYACLARGFS 117
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ + +H +A G ++ +A+++ YS G + +A K+F +P+ ++ +W
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 124 MISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSAREL--FDKMPN 177
MI Y CG G L +L R + + SG I+ ++ A + F N
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 178 RDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D S+ L+N Y+ + S VF + E ++ + + LI GY+R G +AL F
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 236 QMLVEGDVVPNDFTLVAVLL-ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++ + G D LVA++L +C+ L GK VH Y +G + ++ V +ALIDMY+K
Sbjct: 298 ELRMSGK--KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG+++ A+ +F + ++I+S+N++I GL +HG + A F ++ PD +TF +
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L C H GL+ G F+ M + I PQ EHY M L+G AG L++A FV +
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPI 475
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIEL-EPKNPANFVMLSNIYKDLGRWQDVARLK 473
D+ I +LL C H+N +AE+ +++ + E + VMLSN+Y GRW +V RL+
Sbjct: 476 DSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
Query: 474 IAMRDTGFRKLPGCS 488
+ ++ KLPG S
Sbjct: 536 DGISESYGGKLPGIS 550
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 11/382 (2%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC 131
+++H K + + T L Y+ + A K+F PER+V +W ++I AY
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 132 GDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFD----KMPNRDVMSW 183
+ L D ++ + G+ ES D R + D +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+ ++ Y+ +G + K+F +P+ ++ WNV+I GY G + + F M G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH- 203
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN +T+VA+ L + VH + I + +VG AL++MY++C I SA
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VFN + D+++ +++I G + GN +AL LF +++ S ++PD V +L +C +
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
G S V + I+ + D+ + GLL A+S +P E + V + SL+
Sbjct: 324 SVSG-KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLI 381
Query: 424 GACRTHKNVEIAELAFQHLIEL 445
H A F ++E+
Sbjct: 382 LGLGLHGFASTAFEKFTEILEM 403
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 259/492 (52%), Gaps = 36/492 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MP+P+ +WN++ +GY + ++ + LF E++R+ P N F+ + +C+
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP-NEFSFTAALAACA 167
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G +H K G + KG NVVV
Sbjct: 168 RLHLSPLGACIHSKLVKLGLE---------------KG---------------NVVVGNC 197
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
+I Y CG + + E+D V W+ +++ +G + F +MPN D +++
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTY 257
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L++ + SGD + +V +MP N SWN ++ GY + + +A E F +M G V
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG-V 316
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
++++L VL A + L + G +H A +G + V +ALIDMY+KCG+++ A
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAEL 376
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR-EQPDGVTFVGILSACTHMG 362
+F + R+++I WN MI+G A +G++ +A+ LF+Q+K R +PD TF+ +L+ C+H
Sbjct: 377 MFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436
Query: 363 LVRDGFL-YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
+ + L YF+ M++ Y I P +EH + +G+ G + QA +++ D V W +
Sbjct: 437 VPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496
Query: 422 LLGACRTHKNVEIAELAFQHLIEL--EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
LLGAC K+++ A+ +IEL K+ ++++SN+Y RW++V +++ MR++
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556
Query: 480 GFRKLPGCSVIE 491
G K G S I+
Sbjct: 557 GVLKEVGSSWID 568
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
SW+ ++ AR G L A +++ +G+ P+ LV +L G + + + +H Y
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEK-PDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G+ N + N+L+ Y +E A VF+ + D+ISWN++++G G +
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
+ LF ++ S P+ +F L+AC + L G +V + C+ D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ G+ G +D AV + M E D V W +++ +C + +E+ F +
Sbjct: 201 MYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 27/311 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +V MP PN+++WN + GY +E + F +M+ ++ + ++L IV+ +
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH-SSGVRFDEYSLSIVLAAV 330
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ V G +H A K G + +ALI+MYS G + A +F MP +N++VW
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 123 AMISAYISCGDVGSGRRLLD-------LAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
MIS Y GD +L + L P+R + + + + E M F+ M
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV-PMEVMLGYFEMM 449
Query: 176 PNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSD 229
N V +L+ G+V ++V +E + +W L+G +
Sbjct: 450 INEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKA 509
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL-----DMGKWVHVYAESIGYKGNMFV 284
A +M+ GD +++ + + S L A ++G+ + ES K V
Sbjct: 510 AKTVAAKMIELGDADKDEYLYIVM----SNLYAYHERWREVGQIRKIMRESGVLKE---V 562
Query: 285 GNALIDMYAKC 295
G++ ID KC
Sbjct: 563 GSSWIDSRTKC 573
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 184/301 (61%), Gaps = 3/301 (0%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y +G+ + KVF+E PER + SWN +IGG GR ++A+E F M G + P+DFT
Sbjct: 162 YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG-LEPDDFT 220
Query: 250 LVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
+V+V +C LG L + +H V K ++ + N+LIDMY KCG ++ A +F
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ +R+++SW++MI G A +GNT +AL F QM+ +P+ +TFVG+LSAC H GLV +G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
YF M + + P + HYGC+ DLL R G L +A V +MPM+P+ ++W L+G C
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 428 THKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGC 487
+VE+AE +++ELEP N +V+L+N+Y G W+DV R++ M+ K+P
Sbjct: 401 KFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAY 460
Query: 488 S 488
S
Sbjct: 461 S 461
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 162/354 (45%), Gaps = 20/354 (5%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P WN + Y ES D + ++ M R+ P + ++LPIV+++ + G++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLP-DRYSLPIVIKAAVQIHDFTLGKE 138
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
+H VA + GF + F + I +Y G +A KVF E PER + W A+I G
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 134 VGSGRRLL------DLAPERDVVMWSIVIS-GYIESGDMVSARELFDKM------PNRDV 180
+ L P+ D M S+ S G + GD+ A +L + D+
Sbjct: 199 ANEAVEMFVDMKRSGLEPD-DFTMVSVTASCGGL--GDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
M N+L++ Y G + +FEEM +RNV SW+ +I GYA NG +ALE F+QM E
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR-E 314
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
V PN T V VL AC G ++ GK + + + + ++D+ ++ G ++
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 300 SAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
A V + + +++ W ++ G G+ A + M DGV V
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVV 428
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 16/307 (5%)
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
+ WN ++ Y R+ DA++ + M V V+P+ ++L V+ A ++ +GK +H
Sbjct: 83 FLWNNIMRSYIRHESPLDAIQVYLGM-VRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
A +G+ G+ F + I +Y K G E+A VF+ R + SWN +I GL G +
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF----LYFQSMVDHYSIIPQIEHY 387
A+ +F MK S +PD T V + ++C +G + F Q+ + S I +
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML--- 258
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+ D+ G+ G +D A +M + + V W+S++ + N A F+ + E
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEM-RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 448 K-NPANFV-MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
+ N FV +LS G + + AM + F PG S C +V+ S D +
Sbjct: 318 RPNKITFVGVLSACVH--GGLVEEGKTYFAMMKSEFELEPGLSHYGC---IVDLLSRDGQ 372
Query: 506 HPETESI 512
E + +
Sbjct: 373 LKEAKKV 379
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 13/235 (5%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARKVFD+ PE +WNA+ G + + V +F +M R+ P + FT+ V SC
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP-DDFTMVSVTASC 228
Query: 63 SKAGAVREGEQVH-CV-AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
G + Q+H CV AK K + + +LI+MY G + A +F EM +RNVV
Sbjct: 229 GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS 288
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W++MI Y + G+ R++ + + + + V+S + G + + F M
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 177 NR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNG 225
+ + + +++ + G + +KV EEMP + NV W L+GG + G
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +F++M + N +W++M GY+ + + + F +M P N T V+
Sbjct: 271 MDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP-NKITFVGVLS 329
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCT--ALIEMYSAKGSVGDAYKVFGEMPER-N 117
+C G V EG + + K F+ L ++++ S G + +A KV EMP + N
Sbjct: 330 ACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPN 388
Query: 118 VVVWTAMISAYISCGDV 134
V+VW ++ GDV
Sbjct: 389 VMVWGCLMGGCEKFGDV 405
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 224/410 (54%), Gaps = 12/410 (2%)
Query: 93 LIEMYSAKGSVGDAYKVFGEM----PERNVVVWTAMISAYISCGDVGSGRRLLDLAPER- 147
LI Y G + +F M + N + + ++I A S V G L A +R
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 148 ---DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
D + + + Y E GD+ S+R++FD + N V++ N+LL+ +G++ + F+
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV--EGDVVPNDFTLVAVLLACSRL-- 260
MP +V SW +I G+++ G + AL F +M+ + PN+ T V+VL +C+
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
G + +GK +H Y S +G AL+DMY K G +E A+ +F+ + + + +WN +I
Sbjct: 237 GGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAII 296
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+ LA +G AL +F+ MK+S P+G+T + IL+AC LV G F S+ Y I
Sbjct: 297 SALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
IP EHYGC+ DL+GRAGLL A +F++ +P EPDA + +LLGAC+ H+N E+ +
Sbjct: 357 IPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGK 416
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
LI L+P++ +V LS W + +++ AM + G RK+P SV+
Sbjct: 417 QLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 46/292 (15%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
+N + Y T ++ + LF M + P N+ T P ++++ + +V G +H A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQP-NNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
KRGF W+ F+ T+ + Y G + + K+F ++ VV +++ A G++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM---------PNRD---------- 179
P DVV W+ VI+G+ + G A +F +M PN
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 180 ----------------VMSWNTL---------LNGYANSGDVGSFEKVFEEMPERNVYSW 214
VMS + L+ Y +GD+ +F+++ ++ V +W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
N +I A NGR ALE F +M+ V PN TL+A+L AC+R +D+G
Sbjct: 293 NAIISALASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM---NRAAAAPLNHFTLPI 57
M +A + F +MP + +W + NG+S H +++F EM RA P N T
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITP-NEATFVS 226
Query: 58 VVRSCSK--AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
V+ SC+ G +R G+Q+H + + L TAL++MY G + A +F ++ +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE 161
+ V W A+ISA S +GR P++ + M+ ++ S Y+
Sbjct: 287 KKVCAWNAIISALAS-----NGR------PKQALEMFEMMKSSYVH 321
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 242/499 (48%), Gaps = 15/499 (3%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
RKVFD+M +T ++ ++ N + + L EM P + ++
Sbjct: 102 RKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRM 161
Query: 65 AGAVREGEQVHC-VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + H V + + L TAL++MY A+ VF +M +N V WTA
Sbjct: 162 GSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTA 221
Query: 124 MISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVSAREL----FD 173
MIS ++ + G L +L P R ++ + + G + +E+ F
Sbjct: 222 MISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL-VKEIHGFSFR 280
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ D + Y G+V +FE R+V W+ +I GYA G S+ +
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
QM EG + N TL+A++ AC+ L VH G+ ++ +GNALIDMYA
Sbjct: 341 LNQMRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYA 399
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG + +A +VF L +D++SW++MIN +HG+ ++AL +F M + D + F+
Sbjct: 400 KCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
ILSAC H GLV + F + Y + +EHY C +LLGR G +D A MPM+
Sbjct: 460 ILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 414 PDAVIWTSLLGACRTHKNVEIA-ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
P A IW+SLL AC TH +++A ++ L++ EP NPAN+V+LS I+ + G + +
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEV 578
Query: 473 KIAMRDTGFRKLPGCSVIE 491
+ M+ K G S IE
Sbjct: 579 RRVMQRRKLNKCYGFSKIE 597
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 33/416 (7%)
Query: 51 NHFT--LPIVVRSCS-KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAY 107
N FT LP V+++C+ + G Q+HC+ K G ++ + +LI MY+
Sbjct: 43 NGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVR 102
Query: 108 KVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIE 161
KVF EM R+ V + ++I++ G + +L+ P+ ++V + + +
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 162 SGD----MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
S M A L D+ V+ L++ Y D + VF++M +N SW +
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG-ALDMGKWVHVYAESI 276
I G N + ++ F+ M E ++ PN TL++VL AC L + K +H ++
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRH 281
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G + + A + MY +CG + + +F RD++ W++MI+G A G+ ++ ++L
Sbjct: 282 GCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLL 341
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+QM+ + + VT + I+SACT+ L L F S V QI G M+ +L
Sbjct: 342 NQMRKEGIEANSVTLLAIVSACTNSTL-----LSFASTVH-----SQILKCGFMSHILLG 391
Query: 397 AGLLDQ-----AVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
L+D ++S R++ E D V W+S++ A H + A F+ +I+
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R +F+ + W++M +GY+ T +V+ L +M R N TL +V +C+
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM-RKEGIEANSVTLLAIVSACT 364
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + VH K GF + L ALI+MY+ GS+ A +VF E+ E+++V W++
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSS 424
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
MI+AY G G G L+ + G I+ G V D M++
Sbjct: 425 MINAY---GLHGHGSEALE------------IFKGMIKGGHEV------------DDMAF 457
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA-------RNGRFSDALEAFKQ 236
+L+ ++G V + +F + + Y V + YA R G+ DA E
Sbjct: 458 LAILSACNHAGLVEEAQTIFTQAGK---YHMPVTLEHYACYINLLGRFGKIDDAFEVTIN 514
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
M ++ P+ ++L AC G LD+
Sbjct: 515 MPMK----PSARIWSSLLSACETHGRLDVA 540
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 12/246 (4%)
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFT--LVAVLLACS-RLGALDMGKWVHVYAE 274
+ G + + +AL +K L + N FT L +V+ AC+ + +G +H
Sbjct: 17 LKGLVSDQFYDEALRLYK--LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCL 74
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
G + V N+LI MYAK + VF+ + RD +S+ ++IN G +A+
Sbjct: 75 KAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMK 134
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
L +M P +L+ CT MG F ++V + +++ ++ L
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV---LVDERMQESVLLSTAL 191
Query: 395 GRAGLL--DQAVSFVRKMPME-PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
L D A +F ME + V WT+++ C ++N E+ F+ + + E P
Sbjct: 192 VDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM-QRENLRPN 250
Query: 452 NFVMLS 457
+LS
Sbjct: 251 RVTLLS 256
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 190/349 (54%), Gaps = 1/349 (0%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
LL YA SGD+ + +F + R++ WN +I GY + G + L + M + +VP
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR-QNRIVP 207
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ +T +V ACS L L+ GK H K N+ V +AL+DMY KC VF
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ L R++I+W ++I+G HG ++ L F++MK +P+ VTF+ +L+AC H GLV
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G+ +F SM Y I P+ +HY M D LGRAG L +A FV K P + +W SLLGA
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
CR H NV++ ELA +EL+P N N+V+ +N Y G + ++++ M + G +K P
Sbjct: 388 CRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Query: 486 GCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVD 534
G S IE V F D H +E IY+ + +T Y P+ +D
Sbjct: 448 GYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDGLD 496
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 19/289 (6%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T ++++ C + +G+++H GF N +L L+ +Y+ G + A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRL-LDLAPERDV--------VMWSIVISGYIESGD 164
R+++ W AMIS Y+ G G + D+ R V V + +E G
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
A + + +++ + L++ Y +VF+++ RNV +W LI GY +
Sbjct: 230 RAHA-VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY----KG 280
G+ S+ L+ F++M EG PN T + VL AC+ G +D G W H Y+ Y +G
Sbjct: 289 GKVSEVLKCFEKMKEEG-CRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEG 346
Query: 281 NMFVGNALIDMYAKCGVIESAVD-VFNCLDRRDIISWNTMINGLAMHGN 328
+ A++D + G ++ A + V + W +++ +HGN
Sbjct: 347 QHYA--AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+ D +P WNAM +GY ++ + ++ +M + P + +T V R+CS
Sbjct: 170 KIRDLIP------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVP-DQYTFASVFRACSAL 222
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G++ H V KR K N + +AL++MY S D ++VF ++ RNV+ WT++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 126 SAYISCGDV 134
S Y G V
Sbjct: 283 SGYGYHGKV 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+ +R + + G GR +A+ +L + T +L C +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAV----GLLWSSGLQVEPETYAVLLQECKQRKE 123
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
GK +H +G+ N ++ L+ +YA G +++A +F L RD+I WN MI+G
Sbjct: 124 YTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISG 183
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G + L ++ M+ +R PD TF + AC+ + + G M+ I
Sbjct: 184 YVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKS 242
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
I + D+ + ++ + + WTSL+ H V F+ +
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFEKM 301
Query: 443 IELEPK-NPANFVML 456
E + NP F+++
Sbjct: 302 KEEGCRPNPVTFLVV 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
GH +VFD++ N TW ++ +GY +V+ F +M P N T +V+ +
Sbjct: 263 GH--RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRP-NPVTFLVVLTA 319
Query: 62 CSKAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVV 119
C+ G V +G E + + G + A+++ G + +AY+ + P + +
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVM-------WSIVISGYIESGDMVSARELF 172
VW +++ A G+V +LL+LA + + + + + +GY G +A ++
Sbjct: 380 VWGSLLGACRIHGNV----KLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVR 435
Query: 173 DKMPNRDV 180
KM N V
Sbjct: 436 RKMENAGV 443
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 271/543 (49%), Gaps = 34/543 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+M E + +W+ + Y ++ + LF EM A + T+ V+++C+
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 64 KAGAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G VH + +RGF + F+C +LI+MYS V A++VF E RN+V W
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK-MPNRDV- 180
++++ ++ + L + V + + + ++ + F++ +P + +
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS------LLRVCKFFEQPLPCKSIH 351
Query: 181 ------------MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
++ ++L++ Y + V V + M ++V S + +I G A GR
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN-MFVGNA 287
+A+ F M PN T++++L ACS L KW H A N + VG +
Sbjct: 412 EAISIFCHM----RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
++D YAKCG IE A F+ + ++IISW +I+ A++G AL+LFD+MK P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMV--DHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
VT++ LSAC H GLV+ G + F+SMV DH P ++HY C+ D+L RAG +D AV
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK---PSLQHYSCIVDMLSRAGEIDTAVE 584
Query: 406 FVRKMP--MEPDAVIWTSLLGACRTH-KNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
++ +P ++ A W ++L CR K + I ++ELEP + +++ S+ +
Sbjct: 585 LIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAA 644
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
W+DVA ++ +++ R + G S++ + F + D+ + ++ L
Sbjct: 645 EKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRC 704
Query: 523 LRL 525
++L
Sbjct: 705 MKL 707
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 216/516 (41%), Gaps = 114/516 (22%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
FD M ++ +WN + G + + F+++ P N TL +V+ +C
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP-NTSTLVLVIHACRSLWF 142
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+GE++H + GF S + +++ MY+ S+
Sbjct: 143 --DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL------------------------ 176
Query: 128 YISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR--------- 178
S R+L D ERDV+ WS+VI Y++S + V +LF +M +
Sbjct: 177 --------SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 179 --------------------------------DVMSWNTLLNGYANSGDVGSFEKVFEEM 206
DV N+L++ Y+ DV S +VF+E
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET 288
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
RN+ SWN ++ G+ N R+ +ALE F M+ E V ++ T+V++L C
Sbjct: 289 TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K +H GY+ N ++LID Y C +++ A V + + +D++S +TMI+GLA
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACT----------------HMGLVRDGFLY 370
G + +A+S+F M R+ P+ +T + +L+AC+ L +
Sbjct: 408 GRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRA---------------GLLDQAVSFVRKMPME-- 413
S+VD Y+ IE D + GL D+A++ +M +
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 414 -PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
P+AV + + L AC V+ + F+ ++E + K
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 181 MSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+SW N++ + Y GD+ S + F+ M R+ SWNV++ G G + L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+ V G PN TLV V+ AC L D G+ +H Y G+ G V N+++ MYA
Sbjct: 118 LRVWG-FEPNTSTLVLVIHACRSLW-FD-GEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVGIL 355
+ SA +F+ + RD+ISW+ +I L LF +M ++ +PD VT +L
Sbjct: 175 SL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 356 SACT-----------HMGLVRDGF-----LYFQSMVDHYS 379
ACT H +R GF S++D YS
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYS 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 56/293 (19%)
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
+G++ + + + ++ G + F V AC++L W +F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS------W-------------LF 62
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
GN++ D Y KCG + S + F+C++ RD +SWN ++ GL +G + L F +++
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 344 EQPDGVTFVGILSAC---------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM---A 391
+P+ T V ++ AC H ++R GF S+ SI+ CM +
Sbjct: 123 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSV--QNSIL-------CMYADS 173
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
D L L D+ E D + W+ ++ + K + F+ ++ E K
Sbjct: 174 DSLSARKLFDEM--------SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVH-EAKTEP 224
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGF---RKLPGCSVIECNDSVVEFYS 501
+ V ++++ K +D+ + GF R V CN S+++ YS
Sbjct: 225 DCVTVTSVLKACTVMEDI---DVGRSVHGFSIRRGFDLADVFVCN-SLIDMYS 273
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 218/426 (51%), Gaps = 48/426 (11%)
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+R+CS ++ Q+H K + L LI + S+ G A VF ++ +
Sbjct: 27 LRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 119 VVWTAMI------------------------------------SAYISCGDVGSGRRLLD 142
W MI A ++ + G ++
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 143 LAPE----RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
LA + DV + ++ Y + G S R++FDKMP R ++SW T+L G ++ + S
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
E VF +MP RNV SW +I Y +N R +A + F++M V+ DV PN+FT+V +L A +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQAST 262
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+LG+L MG+WVH YA G+ + F+G ALIDMY+KCG ++ A VF+ + + + +WN+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 319 MINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
MI L +HG +ALSLF++M+ +PD +TFVG+LSAC + G V+DG YF M+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAEL 437
Y I P EH CM LL +A +++A + V M +PD + S G T E E
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNET 439
Query: 438 AFQHLI 443
QH I
Sbjct: 440 PSQHQI 445
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 48/351 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A VF+++ P+T TWN M S+ R+ ++LF M + + + FT P V+++C
Sbjct: 70 YASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKAC 129
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ ++R G QVH +A K GF + F L+++Y G KVF +MP R++V WT
Sbjct: 130 LASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWT 189
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
M+ +S + S + + P R+VV W+ +I+ Y+++ A +LF +M P
Sbjct: 190 TMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 177 NR---------------------------------DVMSWNTLLNGYANSGDVGSFEKVF 203
N D L++ Y+ G + KVF
Sbjct: 250 NEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF 309
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ M +++ +WN +I +G +AL F++M E V P+ T V VL AC+ G +
Sbjct: 310 DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 264 DMG-----KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
G + + VY S + N +I + + +E A ++ +D
Sbjct: 370 KDGLRYFTRMIQVYGISPIREHNA----CMIQLLEQALEVEKASNLVESMD 416
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 67/315 (21%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF ++ + ++WN++I + N + +AL F M++ + FT V+ AC
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
++ +G VH A G+ ++F N L+D+Y KCG +S VF+ + R I+SW TM+
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 322 GLAMHGNTADALSLFDQM----------------KNSRE---------------QPDGVT 350
GL + A +F+QM KN R +P+ T
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 351 FVGILSACTHMG----------------LVRDGFLYFQSMVDHYSIIPQIEH-------- 386
V +L A T +G V D FL +++D YS ++
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG-TALIDMYSKCGSLQDARKVFDVM 312
Query: 387 -------YGCMADLLGRAGLLDQAVSFVRKM----PMEPDAVIWTSLLGACRTHKNVEIA 435
+ M LG G ++A+S +M +EPDA+ + +L AC NV+
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Query: 436 ELAFQHLIELEPKNP 450
F +I++ +P
Sbjct: 373 LRYFTRMIQVYGISP 387
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 171/626 (27%), Positives = 276/626 (44%), Gaps = 109/626 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGY----------SLTES---HRDVVV------------- 37
AR VFD+M E N +WNA+ Y L ES RD++
Sbjct: 42 ARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDG 101
Query: 38 -------LFAEMNRAAAAPL--NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF 88
+F EM+R + + FT+ +V+ +K V GEQ+H V K G F
Sbjct: 102 CESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKF 161
Query: 89 LCTALIEMYSA---------------------------------KGSVGDAYKVFGEMPE 115
++LI MYS +G + A VF PE
Sbjct: 162 AVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE 221
Query: 116 RN-VVVWTAMISAYISCG----------------------------DVGSGRRLLDLAPE 146
N + W +I+ Y G +V S + L + E
Sbjct: 222 LNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
Query: 147 -----------RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
+ + S ++ Y + G+M A ++ S ++++ GY++ G
Sbjct: 282 VHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGK 341
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ +++F+ + E+N+ W + GY + LE + + P+ +V+VL
Sbjct: 342 MVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLG 401
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
ACS ++ GK +H ++ G + + A +DMY+KCG +E A +F+ RD +
Sbjct: 402 ACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM 461
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
+N MI G A HG+ A + F+ M +PD +TF+ +LSAC H GLV +G YF+SM+
Sbjct: 462 YNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMI 521
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM-PMEPDAVIWTSLLGACRTHKNVEI 434
+ Y+I P+ HY CM DL G+A LD+A+ + + +E DAVI + L AC +KN E+
Sbjct: 522 EAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTEL 581
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+ + L+ +E N + ++ ++N Y GRW ++ R++ MR GCS +
Sbjct: 582 VKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDK 641
Query: 495 SVVEFYSLDERHPETESIYRALRGLT 520
F S D H ETE+IY L +T
Sbjct: 642 QFHMFTSSDISHYETEAIYAMLHFVT 667
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 56/316 (17%)
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+++G H + K G + L+ +YS G + +A VF EM ERNV W A+I+A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 128 YISCGDVGSGRRLLDLAP-ERDVVMWSIVISGYIES-GDMVSARELFDKMPNRDVMSWNT 185
Y+ +V R L + ERD++ ++ ++SG+ ++ G A E+F +M ++
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE------ 117
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
D+ + M + + NV G E +LV+
Sbjct: 118 -------KDDIWIDDFTVTTMVKLSAKLTNVFYG------------EQLHGVLVK---TG 155
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG--NMFVG-----------NALIDMY 292
ND T AV +H+Y++ +K N+F G NA+I Y
Sbjct: 156 NDGTKFAV------------SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 293 AKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
+ G I+ A+ VF + D ISWNT+I G A +G +AL + M+ + + D +F
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 352 VGILSACTHMGLVRDG 367
+L+ + + ++ G
Sbjct: 264 GAVLNVLSSLKSLKIG 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 59/275 (21%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAA----PLNHFTLP 56
M A+++FD + E N W AMF GY L D V+ E+ RA A + +
Sbjct: 342 MVEAKRLFDSLSEKNLVVWTAMFLGY-LNLRQPDSVL---ELARAFIANETNTPDSLVMV 397
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
V+ +CS + G+++H + + G + L TA ++MYS G+V A ++F ER
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+ V++ AM I+G G + + F+ M
Sbjct: 458 DTVMYNAM-------------------------------IAGCAHHGHEAKSFQHFEDMT 486
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEM-------PERNVYSWNVLIGGYARNG 225
D +++ LL+ + G V EK F+ M PE Y+ +I Y +
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYT--CMIDLYGKAY 544
Query: 226 RFSDALEAFKQMLVEG-DVVPNDFTLVAVLL-ACS 258
R A+E L+EG D V D ++ L ACS
Sbjct: 545 RLDKAIE-----LMEGIDQVEKDAVILGAFLNACS 574
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 237/470 (50%), Gaps = 48/470 (10%)
Query: 92 ALIEMYSAKGSVGDAYKVFGEM------PERNVVVWTAMISAYISCGDVGSGRRLLDLAP 145
AL+E S+ +V+G M PE+ ++ ++ ++ CG + RRL D P
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM--NRILLMHVKCGMIIDARRLFDEIP 185
Query: 146 ERDVVMWSIVISGYIESGDMVSARELF----DKMPNRDVMSWNTLLNG------------ 189
ER++ + +ISG++ G+ V A ELF +++ + + ++ +L
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 190 -----------------------YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
Y+ GD+ FE MPE+ +WN +I GYA +G
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+AL M G V + FTL ++ ++L L++ K H G++ +
Sbjct: 306 SEEALCLLYDMRDSG-VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL+D Y+K G +++A VF+ L R++IISWN ++ G A HG DA+ LF++M + P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ VTF+ +LSAC + GL G+ F SM + + I P+ HY CM +LLGR GLLD+A++F
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+R+ P++ +W +LL ACR +N+E+ + + L + P+ N+V++ N+Y +G+
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+ A + + G +P C+ +E D F S D E++ R +
Sbjct: 545 AEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 74/366 (20%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FD++PE N ++ ++ +G+ ++ + LF M + H T +++R+ +
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH-TFAVMLRASA 235
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G++ G+Q+H A K G N+F+ LI+MYS G + DA F MPE+ V W
Sbjct: 236 GLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNN 295
Query: 124 MISAYISCG----------------------------DVGSGRRLLDLAP---------- 145
+I+ Y G + + L+L
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG 355
Query: 146 -ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
E ++V + ++ Y + G + +AR +FDK+P ++++SWN L+ GYAN
Sbjct: 356 FESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN------------ 403
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
+GR +DA++ F++M + +V PN T +AVL AC+ G +
Sbjct: 404 -------------------HGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSE 443
Query: 265 MGKWVHV-YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMING 322
G + + +E G K +I++ + G+++ A+ + ++ W ++N
Sbjct: 444 QGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Query: 323 LAMHGN 328
M N
Sbjct: 504 CRMQEN 509
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFDK+P N +WNA+ GY+ D V LF +M A AP NH T V+ +C+
Sbjct: 379 ARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP-NHVTFLAVLSACA 437
Query: 64 KAGAVREGEQVHCVAAK-RGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV-VW 121
+G +G ++ ++ G K + +IE+ G + +A P + V +W
Sbjct: 438 YSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMW 497
Query: 122 TAMISAYISCGDVGSGR----RLLDLAPER---DVVMWSI 154
A+++A ++ GR +L + PE+ VVM+++
Sbjct: 498 AALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNM 537
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 198/324 (61%), Gaps = 5/324 (1%)
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGY--ARN 224
AR+LFD++P R+ + WN +++ Y + G V +++E M N S+N +I G +
Sbjct: 102 ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTED 161
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G + A+E +++M +E PN TL+A++ ACS +GA + K +H YA + + +
Sbjct: 162 GSYR-AIEFYRKM-IEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQL 219
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
+ L++ Y +CG I VF+ ++ RD+++W+++I+ A+HG+ AL F +M+ ++
Sbjct: 220 KSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
PD + F+ +L AC+H GL + +YF+ M Y + +HY C+ D+L R G ++A
Sbjct: 280 TPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAY 339
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
++ MP +P A W +LLGACR + +E+AE+A + L+ +EP+NPAN+V+L IY +G
Sbjct: 340 KVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVG 399
Query: 465 RWQDVARLKIAMRDTGFRKLPGCS 488
R ++ RL++ M+++G + PG S
Sbjct: 400 RQEEAERLRLKMKESGVKVSPGSS 423
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 54/359 (15%)
Query: 18 TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV 77
+ + Y+ +H + LF +M+ + A PL+ + ++SC+ A G VH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 78 AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG 137
+ K F N F+ AL++MY SV A K+F E+P+RN VVW AMIS Y CG V
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 138 RRL---LDLAPERDVVMWSIVISGYIESGD-MVSARELFDKM------PN---------- 177
L +D+ P ++ +I G + + D A E + KM PN
Sbjct: 134 VELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 178 ----------RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
+++ S+ + L+ Y G + + VF+ M +R+V +W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+ LI YA +G AL+ F++M + V P+D + VL ACS G D VY +
Sbjct: 252 SSLISAYALHGDAESALKTFQEMEL-AKVTPDDIAFLNVLKACSHAGLADEAL---VYFK 307
Query: 275 SI----GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII-SWNTMINGLAMHGN 328
+ G + + + L+D+ ++ G E A V + + +W ++ +G
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM----NRAAAAPL------ 50
+ HARK+FD++P+ N WNAM + Y+ ++ V L+ M N ++ +
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 51 ----------------------NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF 88
N TL +V +CS GA R +++H A + + +
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRR------LLD 142
L + L+E Y GS+ VF M +R+VV W+++ISAY GD S + L
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKM-------PNRDVMSWNTLLNGYANSGD 195
+ P D + + V+ +G A F +M ++D ++ L++ + G
Sbjct: 279 VTP--DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD--HYSCLVDVLSRVGR 334
Query: 196 VGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
KV + MPE+ +W L+G G A A +++L+ P ++ L+
Sbjct: 335 FEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLL 391
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 250/486 (51%), Gaps = 24/486 (4%)
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER---- 116
S ++ + +G Q+H K G + LI YS D+ + F + P++
Sbjct: 24 SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83
Query: 117 ----------NVVVWTAM-ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
N + W ++ + G++ +L A + ++ I + M
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
+ + DV ++L++ YA G++ K+F+EMP+RNV +W+ ++ GYA+ G
Sbjct: 144 KTGYDA-------DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+AL FK+ L E V ND++ +V+ C+ L++G+ +H + + + FVG
Sbjct: 197 ENEEALWLFKEALFENLAV-NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
++L+ +Y+KCGV E A VFN + +++ WN M+ A H +T + LF +MK S +
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P+ +TF+ +L+AC+H GLV +G YF M + I P +HY + D+LGRAG L +A+
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
+ MP++P +W +LL +C HKN E+A A + EL P + + LSN Y GR
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
++D A+ + +RD G +K G S +E + V F + + RH +++ IY L L +
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494
Query: 526 HGYVPN 531
GY+ +
Sbjct: 495 AGYIAD 500
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R+ F+ P+ ++ TW+++ + ++ E + +M P +H LP +SC+
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDH-VLPSATKSCA 127
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G VHC++ K G+ + F+ ++L++MY+ G + A K+F EMP+RNVV W+
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSG 187
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVM----WSIVISGYIESGDMVSARELF----DKM 175
M+ Y G+ L A ++ + +S VIS S + R++
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ ++L++ Y+ G +VF E+P +N+ WN ++ YA++ +E FK
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFK 307
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M + G + PN T + VL ACS G +D G++ + + +L+DM +
Sbjct: 308 RMKLSG-MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRA 366
Query: 296 GVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNT 329
G ++ A++V + S W ++ +H NT
Sbjct: 367 GRLQEALEVITNMPIDPTESVWGALLTSCTVHKNT 401
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FD+MP+ N TW+ M GY+ + + + LF E A +N ++ V+ C
Sbjct: 169 YARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA-VNDYSFSSVISVC 227
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + + G Q+H ++ K F +SF+ ++L+ +YS G AY+VF E+P +N+ +W
Sbjct: 228 ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN 287
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
AM+ A Y + ELF +M P
Sbjct: 288 AMLKA-------------------------------YAQHSHTQKVIELFKRMKLSGMKP 316
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLIGGYARNGRFSDALE 232
N +++ +LN +++G V F++M E + + L+ R GR +ALE
Sbjct: 317 N--FITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACS 258
M ++ P + A+L +C+
Sbjct: 375 VITNMPID----PTESVWGALLTSCT 396
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 227/435 (52%), Gaps = 18/435 (4%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ +C A+ G +VH + + N + + L+ +Y++ G A++VF M +R+
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 118 V--VVWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVSA- 168
W ++IS Y G L + P+R + G I S + A
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 169 -RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
R+L + DV N L+ YA GD+ VF+ +P ++ SWN ++ GY +G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+AL+ F+ ++V+ + P+ + +VL +R+ + G+ +H + G + + V NA
Sbjct: 278 HEALDIFR-LMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LI +Y+K G + A +F+ + RD +SWN +I+ H ++ L F+QM + +PD
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPD 390
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS-F 406
G+TFV +LS C + G+V DG F M Y I P++EHY CM +L GRAG++++A S
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
V++M +E +W +LL AC H N +I E+A Q L ELEP N NF +L IY R
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRA 510
Query: 467 QDVARLKIAMRDTGF 481
+DV R++ M D G
Sbjct: 511 EDVERVRQMMVDRGL 525
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 170/341 (49%), Gaps = 25/341 (7%)
Query: 4 ARKVFDKMPEPNTA--TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A +VFD+M + +++ WN++ +GY+ + D + L+ +M P + FT P V+++
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKP-DRFTFPRVLKA 204
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C G+V+ GE +H K GF ++ ++ AL+ MY+ G + A VF +P ++ V W
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW 264
Query: 122 TAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
+M++ Y+ G + R ++ E D V S V++ + R+L +
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWVIR 321
Query: 178 RDVMSW-----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
R M W N L+ Y+ G +G +F++M ER+ SWN +I +++N S+ L+
Sbjct: 322 RG-MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLK 377
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
F+QM + P+ T V+VL C+ G ++ G + + ++ G M ++++
Sbjct: 378 YFEQMH-RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 436
Query: 292 YAKCGVIESAVDVF---NCLDRRDIISWNTMINGLAMHGNT 329
Y + G++E A + L+ + W ++ +HGNT
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTV-WGALLYACYLHGNT 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
++L C L A+D G VH + N+ + + L+ +YA CG E A +VF+ +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 310 RRDI--ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC--------- 358
+RD +WN++I+G A G DA++L+ QM +PD TF +L AC
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 359 --THMGLVRDGFLY----FQSMVDHYS-------------IIPQIEHYGCMADLLG--RA 397
H LV++GF Y ++V Y+ +IP ++ + L G
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 398 GLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKN 431
GLL +A+ R M +EPD V +S+L + K+
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A +FD+M E +T +WNA+ + +S + + + F +M+RA A P + T V+
Sbjct: 344 LGQACFIFDQMLERDTVSWNAIISAHS---KNSNGLKYFEQMHRANAKP-DGITFVSVLS 399
Query: 61 SCSKAGAVREGEQVHCVAAKR---GFKWNSFLCTALIEMYSAKGSVGDAYK-VFGEMP-E 115
C+ G V +GE++ + +K K + C ++ +Y G + +AY + EM E
Sbjct: 400 LCANTGMVEDGERLFSLMSKEYGIDPKMEHYAC--MVNLYGRAGMMEEAYSMIVQEMGLE 457
Query: 116 RNVVVWTAMISAYISCG--DVG--SGRRLLDLAPERD 148
VW A++ A G D+G + +RL +L P+ +
Sbjct: 458 AGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNE 494
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 189/322 (58%), Gaps = 15/322 (4%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR-----NGRFSDALEAFKQML 238
TLL+ YA +GD+ KVF+EMPER +WN +IGGY N A+ F++
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 239 VEGD-VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY--KGNMFVGNALIDMYAKC 295
G V P D T+V VL A S+ G L++G VH Y E +G+ + ++F+G AL+DMY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + +A VF + +++ +W +M GLA++G + +L ++M S +P+ +TF +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SA H+GLV +G F+SM + + P IEHYGC+ DLLG+AG + +A F+ MP++PD
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA-------NFVMLSNIYKDLGRWQD 468
A++ SL AC + + E + L+E+E ++ ++V LSN+ G+W +
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 469 VARLKIAMRDTGFRKLPGCSVI 490
V +L+ M++ + PG S +
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 148/349 (42%), Gaps = 33/349 (9%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVV---RSC 62
VF + P+ +N + D + +FA ++++ LN T V+
Sbjct: 66 VFPRFGHPDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ + A+R G VH + K GF + S L T L+ Y+ G + A KVF EMPER V W
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTW 181
Query: 122 TAMISAYISCGD------------------VGSGRRLLDLAPERDVVMWSIVISGYIESG 163
AMI Y S D GSG R D V+ +I +G +E G
Sbjct: 182 NAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTT--MVCVLSAISQTGLLEIG 239
Query: 164 DMVSAR-ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
+V E P DV L++ Y+ G + + VFE M +NV++W + G A
Sbjct: 240 SLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLA 299
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGN 281
NGR ++ +M E + PN+ T ++L A +G ++ G + G
Sbjct: 300 LNGRGNETPNLLNRM-AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPV 358
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNT 329
+ ++D+ K G I+ A + + D I ++ N +++G T
Sbjct: 359 IEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRD--------VVVLFAEMNRAAAA--PLNH 52
+ARKVFD+MPE + TWNAM GY SH+D +VLF + + P +
Sbjct: 165 YARKVFDEMPERTSVTWNAMIGGYC---SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT 221
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGF--KWNSFLCTALIEMYSAKGSVGDAYKVF 110
T+ V+ + S+ G + G VH K GF + + F+ TAL++MYS G + +A+ VF
Sbjct: 222 -TMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF 280
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMV 166
M +NV WT+M + G LL+ E + + ++ ++S Y G +
Sbjct: 281 ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE 340
Query: 167 SARELFDKMPNR 178
ELF M R
Sbjct: 341 EGIELFKSMKTR 352
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 224/416 (53%), Gaps = 14/416 (3%)
Query: 86 NSFLCTALIEMYSAKGSV-GDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRL-LDL 143
N L + L+ YS + + VF MP RN+ W +I + G L L +
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 144 APERDV---------VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG 194
E V ++ + S +SGD++ L + +S + L+ Y + G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVS-SALVIMYVDMG 183
Query: 195 DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
+ K+F++MP R+ + + GGY + G L F++M G + + +V++L
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL-DSVVMVSLL 242
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
+AC +LGAL GK VH + + +GNA+ DMY KC +++ A VF + RRD+I
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
SW+++I G + G+ + LFD+M +P+ VTF+G+LSAC H GLV +LYF+ M
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
Y+I+P+++HY +AD + RAGLL++A F+ MP++PD + ++L C+ + NVE+
Sbjct: 363 -QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVI 490
E + LI+L+P+ + +V L+ +Y GR+ + L+ M++ K+PGCS I
Sbjct: 422 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 175/418 (41%), Gaps = 57/418 (13%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF MP N +WN + +S + + LF M R + + FTLP+++R+CS +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ G+ +H + K GF + F+ +AL+ MY G + A K+F +MP R+ V++TAM
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW--- 183
Y+ G+ +L LA R++ + + +++ +L + V W
Sbjct: 209 GYVQQGEA-----MLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 184 ----------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
N + + Y + VF M R+V SW+ LI GY +G + +
Sbjct: 264 RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +ML EG + PN T + VL AC+ G L W++ L+ Y
Sbjct: 324 FDEMLKEG-IEPNAVTFLGVLSACAH-GGLVEKSWLYF---------------RLMQEYN 366
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
++ V +C+ R ++ +A + M +PD
Sbjct: 367 IVPELKHYASVADCMSRAGLLE---------------EAEKFLEDMP---VKPDEAVMGA 408
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIP-QIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+LS C G V G + ++ + P + +Y +A L AG D+A S + M
Sbjct: 409 VLSGCKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 45/284 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HARK+FD MP ++ + AMF GY + +F EM + A L+ + ++ +C
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA-LDSVVMVSLLMAC 245
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ GA++ G+ VH +R L A+ +MY + A+ VF M R+V+ W+
Sbjct: 246 GQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWS 305
Query: 123 AMISAYISCGDVGSGRRLLD-----------------------------------LAPER 147
++I Y GDV +L D L E
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEY 365
Query: 148 DVV----MWSIVISGYIESGDMVSARELFDKMPNR-DVMSWNTLLNGYANSGDVGSFEKV 202
++V ++ V +G + A + + MP + D +L+G G+V E+V
Sbjct: 366 NIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERV 425
Query: 203 FEEMPE---RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
E+ + R + L G Y+ GRF +A E+ +Q + E +
Sbjct: 426 ARELIQLKPRKASYYVTLAGLYSAAGRFDEA-ESLRQWMKEKQI 468
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/591 (25%), Positives = 257/591 (43%), Gaps = 102/591 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF+++ + + NA+ NG++ + + +M + T+ + C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
REG VH + + + + ++I+MY G A +F R++V W
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWN 464
Query: 123 AMISAY----------------------------------ISC----------------- 131
+MISA+ SC
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ 524
Query: 132 --GDVGSG-RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR---------- 178
GD+ S RL ++ RD+ W+ VISG SG + + F M
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 179 ------------------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
D NTL+ Y D+ S KVF + +
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
N+ SWN +I ++N + + F+ + +E PN+ T V +L A ++LG+ G
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQ 700
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
H + G++ N FV AL+DMY+ CG++E+ + VF I +WN++I+ HG
Sbjct: 701 AHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGM 760
Query: 329 TADALSLFDQMK-NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
A+ LF ++ NS +P+ +F+ +LSAC+H G + +G Y++ M + + + P EH
Sbjct: 761 GEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHR 820
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+ D+LGRAG L +A F+ + A +W +LL AC H + ++ + + L E+EP
Sbjct: 821 VWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEP 880
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE--CNDSV 496
N + ++ L+N Y LG W++ RL+ + D +KLPG SVI+ C D+V
Sbjct: 881 DNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVRCLDTV 931
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 200/449 (44%), Gaps = 38/449 (8%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+FD++ E + WN+M + + V LF EM + TL + + S
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EFDSTTLLLAASALSSLH 202
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
R+ +HC+A + G +S LC AL+ +Y+ ++ A VF M R++V W +++
Sbjct: 203 LSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT 262
Query: 127 AYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
++ G + + + E D V +S VIS ++ L + P
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
V N++++ Y+ GD + E VFEE+ R+V S N ++ G+A NG F +A Q
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF-VGNALIDMYAKC 295
M + P+ T+V++ C L G+ VH Y + + V N++IDMY KC
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVG 353
G+ A +F RD++SWN+MI+ + +G T A +LF ++ + S + T +
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR--KMP 411
IL++C D ++ +S+ C LG D +F+R M
Sbjct: 503 ILTSCDS----SDSLIFGKSV-------------HCWLQKLG-----DLTSAFLRLETMS 540
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
D W S++ C + + + AFQ
Sbjct: 541 ETRDLTSWNSVISGCASSGHHLESLRAFQ 569
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 160/352 (45%), Gaps = 44/352 (12%)
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
+++ + +++ Y G++ S L D E+DV++W+ +I+ ++G ++A LF +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 176 PNR---------------------------------------DVMSWNTLLNGYANSGDV 196
++ D N L+N YA ++
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
S E VF M R++ SWN ++ NG +L+ FK M G + T V+ A
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE-ADTVTFSCVISA 298
Query: 257 CSRLGALDMGKWVHVYAESIGY--KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
CS + L +G+ +H GY + ++ VGN++I MY+KCG E+A VF L RD+I
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKN-SREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
S N ++NG A +G +A + +QM++ + QPD T V I S C + R+G
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
V +E + D+ G+ GL QA + K D V W S++ A
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 159 YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
Y G + A++LF ++P RD++SWN+++ G +GDV + K+F+EMP++N+ SWN++I
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
Y ++ F++M+ G N+ TLV +L AC R L G+ VH
Sbjct: 223 SAYLGANNPGVSISLFREMVRAG-FQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
++ + ALIDMY KC + A +F+ L R+ ++WN MI +HG L LF+
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEA 341
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M N +PD VTFVG+L C GLV G Y+ MVD + I P H CMA+L AG
Sbjct: 342 MINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAG 401
Query: 399 LLDQAVSFVRKMPME---PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
++A ++ +P E P++ W +LL + R N + E + LIE +P N + +
Sbjct: 402 FPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHL 461
Query: 456 LSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
L NIY GRW+DV R++ +++ ++PGC +++ + V
Sbjct: 462 LMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 46/353 (13%)
Query: 20 NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
N +F Y ++ S + + + ++ R P + +T ++ K V G+ H A
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVP-DSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRR 139
K G + +L+ MY+ G++ A K+F E+P+R++V W ++I+ + GDV + +
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----------------------- 176
L D P+++++ W+I+IS Y+ + + + LF +M
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 177 ----------------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGG 220
N V+ L++ Y +VG ++F+ + RN +WNV+I
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYK 279
+ +GR LE F+ M + G + P++ T V VL C+R G + G+ + + + K
Sbjct: 326 HCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGN 328
N + ++Y+ G E A + L D+ W +++ GN
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+MP+ N +WN M + Y + + LF EM RA N TL +++ +C
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG-NESTLVLLLNACG 261
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ ++EG VH + + + TALI+MY VG A ++F + RN V W
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 124 MISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
MI A+ G G L + L P D V + V+ G +G + + + M +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRP--DEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 178 RDVMSWN-----TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL- 231
+ N + N Y+++G E+ + +P+ +V + + RF+
Sbjct: 380 EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 232 --EAFKQMLVEGD 242
E+ + L+E D
Sbjct: 440 LGESIAKSLIETD 452
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 182 SWNT-LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
SW LL + GD ++ + + +Y N + Y + AL + +L
Sbjct: 55 SWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRF 112
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
G VP+ +T V+++ + +D GK H A G + V N+L+ MY CG ++
Sbjct: 113 G-FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDL 171
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
A +F + +RDI+SWN++I G+ +G+ A LFD+M +
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 196/330 (59%), Gaps = 19/330 (5%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+L+ Y++ GDV +VF+E PE+ N+ W +I Y N +A+E FK+M E +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM--EAE 161
Query: 243 VVPNDFTLVAVLL-ACSRLGALDMGKWVHVYAESIGYKG----NMFVGNALIDMYAKCGV 297
+ D +V V L AC+ LGA+ MG+ +Y+ SI K ++ + N+L++MY K G
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGE--EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ------PDGVTF 351
E A +F+ R+D+ ++ +MI G A++G ++L LF +MK + P+ VTF
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+G+L AC+H GLV +G +F+SM+ Y++ P+ H+GCM DL R+G L A F+ +MP
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP 339
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
++P+ VIW +LLGAC H NVE+ E + + EL+ + ++V LSNIY G W + ++
Sbjct: 340 IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK 399
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
++ +R R++PG S IE + EF S
Sbjct: 400 MRDRVRK---RRMPGKSWIELGSIINEFVS 426
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 161/311 (51%), Gaps = 23/311 (7%)
Query: 39 FAEMNRAAAAPLNHFTL--PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEM 96
F R + + ++ F++ I V S KA ++ +G Q+H + K GF + T+L+
Sbjct: 51 FRHRFRQSPSFVDSFSVLFAIKVSSAQKASSL-DGRQIHALVRKLGFNAVIQIQTSLVGF 109
Query: 97 YSAKGSVGDAYKVFGEMPER-NVVVWTAMISAYI----SCGDVGSGRRLLDLAPERDVVM 151
YS+ G V A +VF E PE+ N+V+WTAMISAY S + +R+ E D V+
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 152 WSIVISGYIESGDMVSARELFDKMPNR------DVMSWNTLLNGYANSGDVGSFEKVFEE 205
++ +S + G + E++ + R D+ N+LLN Y SG+ K+F+E
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-----EGDVVPNDFTLVAVLLACSRL 260
++V ++ +I GYA NG+ ++LE FK+M + + PND T + VL+ACS
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 261 GALDMGKWVHVYAESIGY--KGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWN 317
G ++ GK H + + Y K ++D++ + G ++ A + N + + + + W
Sbjct: 290 GLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 318 TMINGLAMHGN 328
T++ ++HGN
Sbjct: 349 TLLGACSLHGN 359
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 36/277 (12%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+AR+VFD+ PE N W AM + Y+ E+ + + LF M A L+ + + + +
Sbjct: 118 YARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME-AEKIELDGVIVTVALSA 176
Query: 62 CSKAGAVREGEQVH--CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
C+ GAV+ GE+++ + KR + L +L+ MY G A K+F E ++V
Sbjct: 177 CADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVT 236
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
+T+MI Y G L D +S D V PN D
Sbjct: 237 TYTSMIFGYALNGQAQESLELFKKMKTID------------QSQDTVIT-------PN-D 276
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEM------PERNVYSWNVLIGGYARNGRFSDALEA 233
V ++ +L ++SG V ++ F+ M R + + ++ + R+G DA E
Sbjct: 277 V-TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAH-FGCMVDLFCRSGHLKDAHEF 334
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
QM ++ PN +L ACS G +++G+ V
Sbjct: 335 INQMPIK----PNTVIWRTLLGACSLHGNVELGEEVQ 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G + F+ +++ S N + Y +G AL F+ + + F+++
Sbjct: 12 GVINKFDSFLLHFHTKSLKS-NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFA 70
Query: 254 LLACS--RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN-CLDR 310
+ S + +LD G+ +H +G+ + + +L+ Y+ G ++ A VF+ ++
Sbjct: 71 IKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK 129
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG-FL 369
++I+ W MI+ + N+ +A+ LF +M+ + + DGV LSAC +G V+ G +
Sbjct: 130 QNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEI 189
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
Y +S+ + + + ++ ++G ++A + M D +TS++
Sbjct: 190 YSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMI 242
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-----NRAAAAPLNHFTLPIV 58
ARK+FD+ + T+ +M GY+L ++ + LF +M ++ N T V
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFK-----WN------SFLCTALIEMYSAKGSVGDAY 107
+ +CS +G V EG KR FK +N F C +++++ G + DA+
Sbjct: 283 LMACSHSGLVEEG--------KRHFKSMIMDYNLKPREAHFGC--MVDLFCRSGHLKDAH 332
Query: 108 KVFGEMPER-NVVVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIES 162
+ +MP + N V+W ++ A G+V G RR+ +L +RD V + +S S
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL--DRDHVGDYVALSNIYAS 390
Query: 163 GDM------VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
M + R +MP + + +++N + + D + + E+ E
Sbjct: 391 KGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISE 442
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 151/514 (29%), Positives = 256/514 (49%), Gaps = 26/514 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +FD+MPE + +WN M +G H + +F +M R P FT I+
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRP-TEFTFSILA- 143
Query: 61 SCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
S VR GEQ+H A G ++N + ++++MY G A VF M +R+VV
Sbjct: 144 --SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 120 VWTAMISAYISCGDVGSGR---------RLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
W +I +SC D G+ R +++ P+ V S+V+S + ++ ++
Sbjct: 202 SWNCLI---LSCSDSGNKEVALDQFWLMREMEIQPDEYTV--SMVVSICSDLRELSKGKQ 256
Query: 171 LFDKMPNRDVMSWNTLLNG----YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+S + +L ++ + K+F E+ + + N +IG Y+ +
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
DAL F + + V P+ FT +VL + + + LD G VH +G+ + V
Sbjct: 317 GEDALRLFILAMTQS-VRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQ 345
+L++MY K G ++ A+ VF D +D+I WNT+I GLA + ++L++F+Q+ N +
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
PD VT +GIL AC + G V +G F SM + + P EHY C+ +LL R G++++A
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
K+P EP + IW +L A + +AE + ++E EPK+ +++L IY+ R
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
W++ +L+ AM + + G S I SV F
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 180/421 (42%), Gaps = 43/421 (10%)
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
VH + GF ++ +++Y GSV +A ++F ++P++N + W + G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGYIES------------------------------- 162
+ + L D PERDVV W+ +ISG +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 163 ------GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
G+ + + + +++ WN++++ Y G VF M +R+V SWN
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC 205
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
LI + +G AL+ F ++ E ++ P+++T+ V+ CS L L GK +
Sbjct: 206 LILSCSDSGNKEVALDQF-WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKM 264
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G+ N V A IDM++KC ++ +V +F L++ D + N+MI + H DAL LF
Sbjct: 265 GFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF 324
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+PD TF +LS+ + L D S+V + ++ +
Sbjct: 325 ILAMTQSVRPDKFTFSSVLSSMNAVML--DHGADVHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 397 AGLLDQAVSFVRKMPMEPDAVIW-TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
G +D A+ K + D + W T ++G R + VE + F L+ + P +
Sbjct: 383 TGSVDLAMGVFAKTDGK-DLIFWNTVIMGLARNSRAVESLAI-FNQLLMNQSLKPDRVTL 440
Query: 456 L 456
+
Sbjct: 441 M 441
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 42/234 (17%)
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+ K VH G+ + GN + +Y K G + +A+ +F+ + ++ I+WN + GL
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+G +AL LFD+M + D V++ ++S G G F M + I P
Sbjct: 82 KNGYLNNALDLFDEMP----ERDVVSWNTMISGLVSCGFHEYGIRVFFDM-QRWEIRPTE 136
Query: 385 EHYGCMA---------------------------------DLLGRAGLLDQAVSFVRKMP 411
+ +A D+ R G+ D A+S M
Sbjct: 137 FTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV--MLSNIYKDL 463
+ D V W L+ +C N E+A F + E+E + P + M+ +I DL
Sbjct: 197 -DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ-PDEYTVSMVVSICSDL 248
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 258/509 (50%), Gaps = 36/509 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA +FD++P+ + ++ N+ + + + + D + LF +++RA+ +H P V+ +C
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTP-VLGAC 94
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S G QVH + K+G + + TALI+MYS G + D+ +VF + E+++V W
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES---------GDMVSARELFD 173
A++S ++ G + V + +S +++ G V A +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV-- 212
Query: 174 KMPNRDVMSWNT-LLNGYANSGDVGSFEKVFEEMPERNVYS----WNVLIGGYARNGRFS 228
+ RD++ T +++ Y++ G + KV+ + NV++ N LI G RN +
Sbjct: 213 -VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSLISGCIRNRNYK 268
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+A L+ PN L + L CS L +GK +H A G+ + + N L
Sbjct: 269 EAF------LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQP 346
+DMY KCG I A +F + + ++SW +MI+ A++G+ AL +F +M + S P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ VTF+ ++SAC H GLV++G F M + Y ++P EHY C D+L +AG ++
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 407 VRKMPMEPD-----AVIWTSLLGACRTHKNVEIAELAFQHLI-ELEPKNPANFVMLSNIY 460
V +M ME D IW ++L AC + ++ E + L+ E P+N + +V++SN Y
Sbjct: 443 VERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLPGCSV 489
+G+W V L+ +++ G K G S+
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F ++ N V S N +L + +F+E+P+R++ S N + + R+G +D L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 232 EAFKQM-LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
F Q+ D+ + FT VL ACS L + G+ VH G + ALID
Sbjct: 70 ALFLQIHRASPDLSSHTFT--PVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALID 127
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY+K G + +V VF ++ +D++SWN +++G +G +AL +F M R + T
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
++ C + +++ G +V + + M GL+++A+ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG--TAMISFYSSVGLINEAMKVYNSL 245
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAEL 437
+ D V+ SL+ C ++N + A L
Sbjct: 246 NVHTDEVMLNSLISGCIRNRNYKEAFL 272
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 237/526 (45%), Gaps = 80/526 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+M + N A N + + T + + ++ M A N T ++R CS
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK-NGLTYCYMIRGCS 224
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V EG+Q+H + K G WN N+ V
Sbjct: 225 HDRLVYEGKQLHSLVVKSG--WNI----------------------------SNIFVANV 254
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------- 176
++ Y +CGD+ R + PE+DV+ W+ ++S + G ++ + +LF KM
Sbjct: 255 LVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPS 314
Query: 177 -------------NRDVMS--------------------WNTLLNGYANSGDVGSFEKVF 203
N D+ S + L++ Y + + ++
Sbjct: 315 IRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLY 374
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL--LACSRLG 261
+ +P N+ N L+ G D +E F M+ EG + ++ TL VL L+ S
Sbjct: 375 QSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI-DEVTLSTVLKALSLSLPE 433
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+L VH A GY ++ V +LID Y K G E + VF+ LD +I ++IN
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
G A +G D + + +M PD VT + +LS C+H GLV +G L F S+ Y I
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P + Y CM DLLGRAGL+++A + + + D V W+SLL +CR H+N I A +
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQ------DVARLKIAMRDTGF 481
L+ LEP+N A ++ +S Y ++G ++ ++A + MR+ G+
Sbjct: 614 LMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGY 659
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 212/487 (43%), Gaps = 53/487 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + FD+M + T+N + +G S + L+AEM + T P V+ CS
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRE-SASTFPSVLSVCS 123
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
REG QVHC GF N F+ +AL+ +Y+ V A K+F EM +RN+ V
Sbjct: 124 DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNL 183
Query: 124 MISAYISCGDVGSGRRLLDL-------APERDVVMWSIVISGYIESGDMVSARELFDKMP 176
++ + G +RL ++ ++ + + +I G + ++L +
Sbjct: 184 LLRCFC---QTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 177 N-----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ N L++ Y+ GD+ + F +PE++V SWN ++ A G D+L
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSL 300
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALID 290
+ F +M G P+ ++ L CSR + GK +H Y +G+ ++ V +ALID
Sbjct: 301 DLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALID 359
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY KC IE++ ++ L ++ N+++ L G T D + +F M + D VT
Sbjct: 360 MYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 351 FVGILSA-----------CT--HMGLVRDGF----LYFQSMVDHYSIIPQIE-------- 385
+L A CT H ++ G+ S++D Y+ Q E
Sbjct: 420 LSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDE 479
Query: 386 ----HYGCMADLL---GRAGLLDQAVSFVR---KMPMEPDAVIWTSLLGACRTHKNVEIA 435
+ C+ ++ R G+ V +R +M + PD V S+L C VE
Sbjct: 480 LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEG 539
Query: 436 ELAFQHL 442
EL F L
Sbjct: 540 ELIFDSL 546
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
++ P+ V + N ++ SG++ S + F+EM R+V ++N+LI G +R G A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+E + +M+ G + + T +VL CS G VH S+G+ NMFV +AL+
Sbjct: 97 IELYAEMVSCG-LRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
+YA +++ A+ +F+ + R++ N ++ G + ++ +M+ +G+T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+ ++ C+H LV +G +V I I + D G L ++ +
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 411 PMEPDAVIWTSLLGACRTHKNV 432
P E D + W S++ C + +V
Sbjct: 276 P-EKDVISWNSIVSVCADYGSV 296
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 226/489 (46%), Gaps = 104/489 (21%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ R +FD + PN N+MF +S + DV+ L+ + +R P + F+ P+V++S
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP-DAFSFPVVIKSA 116
Query: 63 SKAGAVREG------------------------EQVHC-------VAAKRGFKWNSFLC- 90
+ G + + E V ++ ++G WN +
Sbjct: 117 GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 91 -------------------------TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
T +I ++ + +A K F MPE++VV W AM+
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 126 SAYISCGDVGSGRRL----LDLAPERDVVMWSIVISG----------------------- 158
S Y G RL L L + W IVIS
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 159 ------------YIESGDMVSARELFDKM-PNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
+ + D+ SAR +F+++ R++++WN +++GY GD+ S ++F+
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
MP+RNV SWN LI GYA NG+ + A+E F+ M+ GD P++ T+++VL AC + L++
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
G + Y K N +LI MYA+ G + A VF+ + RD++S+NT+ A
Sbjct: 417 GDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAA 476
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
+G+ + L+L +MK+ +PD VT+ +L+AC GL+++G F+S+ + P +
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLAD 531
Query: 386 HYGCMADLL 394
HY CM DLL
Sbjct: 532 HYACM-DLL 539
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 133/342 (38%), Gaps = 83/342 (24%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N +++ Y V S KVF+++ +R WNV+I GY + G +A + F M+ E DV
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF-DMMPENDV 198
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
V W +I +AK +E+A
Sbjct: 199 V----------------------SWT-----------------VMITGFAKVKDLENARK 219
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG- 362
F+ + + ++SWN M++G A +G T DAL LF+ M +P+ T+V ++SAC+
Sbjct: 220 YFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 363 --------------LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG------------- 395
VR +++D ++ I+ + + LG
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 396 ---RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPAN 452
R G + A MP + + V W SL+ + +A F+ +I+ P
Sbjct: 340 GYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 453 FVMLSNIYKDLGRWQD----------VARLKIAMRDTGFRKL 484
M+S + G D + + +I + D+G+R L
Sbjct: 399 VTMIS-VLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSL 439
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR++FD MP+ N +WN++ GY+ + F +M + + T+ V+
Sbjct: 347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + G+ + K K N +LI MY+ G++ +A +VF EM ER+VV
Sbjct: 407 ACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS 466
Query: 121 WTAMISAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+ + +A+ + GD LL D E D V ++ V++ +G + + +F +
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Query: 177 N 177
N
Sbjct: 527 N 527
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 215/460 (46%), Gaps = 41/460 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F + +WNA+ + +E+ + LF M +P N T V+ S
Sbjct: 269 AERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP-NQGTYVSVLGVSS 327
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G Q+H + K G + L ALI+ Y+ G++ D+ F + ++N+V W A
Sbjct: 328 LVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNA 387
Query: 124 MISAYIS-----CGDVGSGRRLLDLAP------------------------------ERD 148
++S Y + C + + P + D
Sbjct: 388 LLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDND 447
Query: 149 VVMWSIVISGYIESGDMVSARELFDKMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
V+ S++ S Y ++ M A L D V+ N + Y+ G K+ +
Sbjct: 448 YVLSSLMRS-YAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
+ + SWN+ I +R+ + +E FK ML + ++ P+ +T V++L CS+L L +G
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 268 WVHVYAESIGYK-GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
+H + + FV N LIDMY KCG I S + VF +++I+W +I+ L +H
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G +AL F + + +PD V+F+ IL+AC H G+V++G FQ M D Y + P+++H
Sbjct: 626 GYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDH 684
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
Y C DLL R G L +A +R+MP DA +W + L C
Sbjct: 685 YRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 221/482 (45%), Gaps = 52/482 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MPE N ++N + GYS +F+EM P N T+ ++ SC+
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLP-NQSTVSGLL-SCA 125
Query: 64 KAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
VR G Q+H ++ K G F ++F+ T L+ +Y + A +VF +MP +++ W
Sbjct: 126 SLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWN 184
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
M+S G + R L+ + + V+ G D+ +++L +
Sbjct: 185 HMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKK 244
Query: 179 ----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
++ N+L++ Y G+ E++F++ ++ SWN +I A++ AL+ F
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
M G PN T V+VL S + L G+ +H G + + +GNALID YAK
Sbjct: 305 VSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E + F+ + ++I+ WN +++G A + + LSLF QM +P TF
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 355 LSACT-------HMGLVRDGF----LYFQSMVDHY--------------------SIIPQ 383
L +C H +VR G+ S++ Y S++P
Sbjct: 423 LKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP- 481
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC-RTHKNVEIAELAFQHL 442
+A + R G ++V + + +PD V W + AC R+ + E+ EL F+H+
Sbjct: 482 ---LNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVIEL-FKHM 536
Query: 443 IE 444
++
Sbjct: 537 LQ 538
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 8/287 (2%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVG------SGRRLL 141
++C +I +Y G V A KVF +MPERN V + +I Y GDV S R
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 142 DLAPERDVVMWSIVISGY-IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
P + V + + + +G + L + D LL Y + E
Sbjct: 110 GYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+VFE+MP +++ +WN ++ G + + F++++ G + + + + VL S +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL-TESSFLGVLKGVSCV 228
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
LD+ K +H A G + V N+LI Y KCG A +F DI+SWN +I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
A N AL LF M P+ T+V +L + + L+ G
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+ + +P+T +WN S ++ H +V+ LF M ++ P + +T ++ CSK
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP-DKYTFVSILSLCSKL 558
Query: 66 GAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+ G +H + K F ++F+C LI+MY GS+ KVF E E+N++ WTA+
Sbjct: 559 CDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTAL 618
Query: 125 ISAYISCGDVGSGRRLLD-------LAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
IS G G G+ L+ L + D V + +++ G + LF KM +
Sbjct: 619 ISCL---GIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD 675
Query: 178 RDVM----SWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYAR 223
V + ++ A +G + E + EMP + W + G R
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG--YKGNMFVGNALIDMYAKCGVI 298
GD+ ++ +V++L C + + K +H + ++ ++V N +I +Y K G +
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV 65
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
A VF+ + R+ +S+NT+I G + +G+ A +F +M+ P+ T G+LS C
Sbjct: 66 SLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-C 124
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYG-CMADLLGRAGLLDQAVSFVRKMPME 413
+ VR G + Y + G C+ L GR LL+ A MP +
Sbjct: 125 ASLD-VRAG-TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 192/368 (52%), Gaps = 10/368 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + FD M E + +W A+ + S + +F M P N FT+ ++++CS
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP-NEFTVCSILKACS 295
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ A+R G QVH + KR K + F+ T+L++MY+ G + D KVF M RN V WT+
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMPN-- 177
+I+A+ G L + R ++ ++ + + + G ++ +EL ++
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
++V +TL+ Y G+ V +++P R+V SW +I G + G S+AL+ K
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M+ EG V PN FT + L AC+ +L +G+ +H A+ N+FVG+ALI MYAKC
Sbjct: 476 EMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKC 534
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + A VF+ + ++++SW MI G A +G +AL L +M+ + D F IL
Sbjct: 535 GFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594
Query: 356 SACTHMGL 363
S C + L
Sbjct: 595 STCGDIEL 602
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 197/470 (41%), Gaps = 80/470 (17%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARKVFD MPE NT TW AM +GY + LF + + N ++ C
Sbjct: 135 YARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLC 194
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S+ G QVH K G VG N++V +
Sbjct: 195 SRRAEFELGRQVHGNMVKVG--------------------VG------------NLIVES 222
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF---------- 172
+++ Y CG++ S R D+ E+DV+ W+ VIS G + A +F
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 173 -----------------------------DKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
+M DV +L++ YA G++ KVF
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ M RN +W +I +AR G +A+ F+ ++ ++ N+ T+V++L AC +GAL
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFR-IMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+GK +H + N+++G+ L+ +Y KCG A +V L RD++SW MI+G
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
+ G+ ++AL +M +P+ T+ L AC + + G S+ +
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALSN 520
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL------GACR 427
+ + + + G + +A MP E + V W +++ G CR
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCR 569
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 45/371 (12%)
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG-------------------- 163
+IS+ + GD+ R++ D PE++ V W+ +I GY++ G
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 164 ---------DMVSARELFD----------KMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
++ S R F+ K+ +++ ++L+ YA G++ S + F+
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
M E++V SW +I +R G A+ F ML +PN+FT+ ++L ACS AL
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW-FLPNEFTVCSILKACSEEKALR 301
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
G+ VH K ++FVG +L+DMYAKCG I VF+ + R+ ++W ++I A
Sbjct: 302 FGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA 361
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
G +A+SLF MK + +T V IL AC +G + G ++ + SI +
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNV 420
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ L + G A + ++++P D V WT+++ C + + A + +I+
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 445 --LEPKNPANF 453
+EP NP +
Sbjct: 480 EGVEP-NPFTY 489
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 3/242 (1%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L++ GD+ KVF+ MPE+N +W +I GY + G +A F+ + G
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
N+ V +L CSR ++G+ VH +G GN+ V ++L+ YA+CG + SA+
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALR 239
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
F+ ++ +D+ISW +I+ + G+ A+ +F M N P+ T IL AC+
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+R G S+V I + + D+ + G + M + V WTS++
Sbjct: 300 LRFG-RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSII 357
Query: 424 GA 425
A
Sbjct: 358 AA 359
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 210/408 (51%), Gaps = 20/408 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLT--ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A+KVFD+ N +WNA+ G ++ + ++DV+ F EM R LN ++L V +S
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM-RELGVDLNVYSLSNVFKS 223
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ A A+R+G + H +A K G + FL T+L++MY G VG A +VF E+ ER++VVW
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 122 TAMISAYISCGD----VGSGRRLLD---LAPERDVVMWSIVISGYIES---GDMVSAREL 171
AMI+ +G R ++ + P ++ + + G +++ G V A L
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
K + L++ Y GD+ S +VF +RN SW L+ GYA NGRF AL
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ M EG P+ T+ VL C+ L A+ GK +H YA + N+ + +L+ M
Sbjct: 404 RSIVWMQQEG-FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVM 462
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCGV E + +F+ L++R++ +W MI+ + + + +F M S+ +PD VT
Sbjct: 463 YSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTM 522
Query: 352 VGILSACTHMGLVRDGF-LYFQSMVDHYSIIP-----QIEHYGCMADL 393
+L+ C+ + ++ G L+ + + IP I+ YG DL
Sbjct: 523 GRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDL 570
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 18/416 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR+VFD++ E + W AM G + + + + LF M N L ++
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 61 SCSKAGAVREGEQVHC-VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
A++ G++VH V + + F+ + LI++Y G + +VF +RN +
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARE----- 170
WTA++S Y + G R + + DVV + V+ E + +E
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 171 ---LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
LF +PN +++ +L+ Y+ G ++F+ + +RNV +W +I Y N
Sbjct: 445 LKNLF--LPNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+E F+ ML+ P+ T+ VL CS L AL +GK +H + ++ FV
Sbjct: 501 RAGIEVFRLMLLSKHR-PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR 559
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+I MY KCG + SA F+ + + ++W +I + DA++ F+QM + P+
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPN 619
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
TF +LS C+ G V + + +F M+ Y++ P EHY + +LL R G +++A
Sbjct: 620 TFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 26/360 (7%)
Query: 32 HRDVVVLFAEMNRAAAA------------PLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
HRD+ + FA N A P+N T ++ +C + ++ G+QVH
Sbjct: 80 HRDIQI-FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIR 138
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD------ 133
G + N FL T L+ MY+A GSV DA KVF E NV W A++ + G
Sbjct: 139 INGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDV 198
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGY-----IESGDMVSARELFDKMPNRDVMSWNTLLN 188
+ + + +L + +V S V + + G A + + + N V +L++
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVD 257
Query: 189 GYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
Y G VG +VF+E+ ER++ W +I G A N R +AL F+ M+ E + PN
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 249 TLVAVLLACSRLGALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
L +L + AL +GK VH + +S Y FV + LID+Y KCG + S VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+R+ ISW +++G A +G AL M+ +PD VT +L C + ++ G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 218/490 (44%), Gaps = 33/490 (6%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
M A V++ M E P T+N M + V ++ EM R + T
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIE-FSEVTYN 277
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
I++ SK G + E + H + GF + LIE Y +G DA+ V EM
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 117 NVVVWTAMISAYISC----GDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
+ T+ + YI G + R LL DVV ++ ++ GYI+ G V A LF
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 173 DKMPNRD----VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARN 224
D + D ++++NTL++G SG++ +++ EEM + +V ++ L+ G+ +N
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG---YKGN 281
G S A E + +ML +G + P+ + + RLG D K ++ E + + +
Sbjct: 458 GNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGELRLG--DSDKAFRLHEEMVATDHHAPD 514
Query: 282 MFVGNALIDMYAKCGVIESAVD----VFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+ + N ID K G + A++ +F D +++ T+I G +G A +L+D
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+M R P +T+ ++ G + F Y M + P + + + + +A
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKA 633
Query: 398 GLLDQAVSFVRKMPME---PDAVIWTSLLGA-CRTHKNVEIAELAFQHL-IELEPKNPAN 452
G +D+A ++ KM E P+ +T L+ C K E+ +L + L E+EP +
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 453 FVMLSNIYKD 462
+ ++ KD
Sbjct: 694 RALFKHLEKD 703
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 180/435 (41%), Gaps = 45/435 (10%)
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVG 135
++GF + C ++++ + A V+ M E V+ + M+ + GD+
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 136 SGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNRDV----MSWNTLL 187
++ R++ V ++I+I+G+ ++G M AR M S+N L+
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 188 NGYANSGDVGSFEKVFEEMPERNVY----SWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
GY G V +EM +Y ++N+ I GR DA E M DV
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-AAPDV 374
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG-----NMFVGNALIDMYAKCGVI 298
V + TL+ G + MGK+V + ++ N LID + G +
Sbjct: 375 VSYN-TLMH--------GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 299 ESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
E A + + + D+I++ T++ G +GN + A ++D+M +PDG +
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 355 LSACTHMGLVRDGFLYFQSMV--DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM-- 410
+G F + MV DH++ P + Y D L + G L +A+ F RK+
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 411 -PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI--ELEPKNPANFVMLSNIYKDLGRWQ 467
+ PD V +T+++ + ++A + ++ L P FV++ + GR +
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG-HAKAGRLE 602
Query: 468 DVARLKIAMRDTGFR 482
+ M+ G R
Sbjct: 603 QAFQYSTEMKKRGVR 617
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 16/312 (5%)
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
+ ++G+ AL +L + V + L+ + C L K VH +
Sbjct: 228 AFCKHGKVKKALYTI-DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
++ + L++MY+ CG+ A VF + +++ +W +I A +G DA+ +F +
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
K PDG F GI AC +G V +G L+F+SM Y I P IE Y + ++ G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
LD+A+ FV +MPMEP+ +W +L+ R H N+E+ + + + L+P
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR---------- 456
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVI--ECNDSVVEFYSLDERHPETESIYRALR 517
L + + + D L S I S+ EF + D PE + +++ LR
Sbjct: 457 ---LNKQSREGFIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLR 513
Query: 518 GLTMLLRLHGYV 529
L M + GYV
Sbjct: 514 NLKMHMVEVGYV 525
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ S + LL Y+N G VFE+M E+N+ +W ++I +A+NG DA++ F +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCG 296
EG+ +P+ + AC LG +D G +H + S Y + + +L++MYA G
Sbjct: 348 EEGN-IPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPG 405
Query: 297 VIESAVDVFNCLDRR-DIISWNTMINGLAMHGN------TADALSLFDQMKNSREQPDG 348
++ A++ + ++ W T++N +HGN A+ + D + +++ +G
Sbjct: 406 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 146/316 (46%), Gaps = 33/316 (10%)
Query: 223 RNGRFSDALEAFKQMLVEGDVV--PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
R G+ A+E K EG VV P F + + C AL K VH + S
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQL---CGDAQALQEAKVVHEFITSSVGIS 214
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
++ N++I+MY+ CG +E A+ VFN + R++ +W +I A +G DA+ F + K
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+PDG F I AC +G + +G L+F+SM Y IIP +EHY + +L G L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE------LEPKNPANFV 454
D+A+ FV MEP+ +W +L+ R H ++ + + Q ++E L ++ A V
Sbjct: 335 DEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRC-QDMVEQLDASRLNKESKAGLV 391
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+ + D+ + K+ G N + + D PE +Y
Sbjct: 392 PV--------KSSDLVKEKLQRMAKG-----------PNYGIRYMAAGDISRPENRELYM 432
Query: 515 ALRGLTMLLRLHGYVP 530
AL+ L + GYVP
Sbjct: 433 ALKSLKEHMIEIGYVP 448
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ ++N+++ Y+ G V VF MPERN+ +W +I +A+NG+ DA++ F +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMG--KWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
EG+ P+ + AC LG ++ G + +Y E G M +L+ M A+ G
Sbjct: 275 QEGN-KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKE-YGIIPCMEHYVSLVKMLAEPG 332
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
++ A+ ++ ++ W T++N +HG+ L L D+ ++ EQ D
Sbjct: 333 YLDEALRFVESME-PNVDLWETLMNLSRVHGD----LILGDRCQDMVEQLD 378
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 39/319 (12%)
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G + +A+E + +G + + L+ + C + AL+ + VH ++ ++
Sbjct: 97 QGNWREAVEVLDYLENKGYAM-DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT-----MINGLAMHGNTADALSLFDQ 338
NA+I+MY+ C ++ A+ VF ++ WN+ M+ +G +A+ LF +
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFE-----EMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTR 210
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
K +P+G F + S CT G V++G L FQ+M Y I+P +EHY + +L +G
Sbjct: 211 FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSN 458
LD+A++FV +MPMEP +W +L+ R H +VE+ + + + +L
Sbjct: 271 HLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL------------- 317
Query: 459 IYKDLGRWQDVARLK-IAMRDTGF-RKLPGCSVIECNDSVVEFYS----LDERHPETESI 512
D R V+ +A + + F +K P S FYS +D HP+ I
Sbjct: 318 ---DATRLDKVSSAGLVATKASDFVKKEPS------TRSEPYFYSTFRPVDSSHPQMNII 368
Query: 513 YRALRGLTMLLRLHGYVPN 531
Y L L L+ GYVP+
Sbjct: 369 YETLMSLRSQLKEMGYVPD 387
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 122/221 (55%), Gaps = 5/221 (2%)
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+ DA+E L++ +P+ V + +C+ L +L+ K VH + ++G+ + N
Sbjct: 221 YKDAIE-----LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+I M+ +C I A VF+ + +D+ SW+ M+ + +G DAL LF++M +P
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ TF+ + AC +G + + FL+F SM + + I P+ EHY + +LG+ G L +A +
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+R +P EP A W ++ R H ++++ + + +++++P
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N +++ + + ++VF+ M ++++ SW++++ Y+ NG DAL F++M G +
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-L 333
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYA----ESIGYKGNMFVGNALIDMYAKCGVIE 299
PN+ T + V LAC+ +G ++ ++H + I K ++G ++ + KCG +
Sbjct: 334 KPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLG--VLGVLGKCGHLV 390
Query: 300 SAVDVFNCLDRRDIIS-WNTMINGLAMHGN 328
A L W M N +HG+
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHGD 420
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 53/432 (12%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+PNT T+N + +G L + V L M P + FT VV K G +
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP-DLFTYGTVVNGLCKRGDIDLAL 240
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ K + + + T +I+ +V DA +F EM + NVV + ++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 129 ISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+ G RLL ER +VV +S +I +++ G +V A +L+D+M R D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
++++L+NG+ + + +FE M + NV ++N LI G+ + R + +E F++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G +V N T ++ + G DM + + S G
Sbjct: 421 MSQRG-LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---------------- 463
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
DII+++ +++GL +G AL +F+ ++ S+ +PD T+ ++
Sbjct: 464 ---------------DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME--- 413
G V DG+ F S+ + P + Y M R GL ++A + R+M +
Sbjct: 509 GMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 414 PDAVIWTSLLGA 425
P++ + +L+ A
Sbjct: 568 PNSGTYNTLIRA 579
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 163/387 (42%), Gaps = 65/387 (16%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNR-------------- 178
+++ L E D+V S +++GY + A L D+M PN
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 179 -------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWN 215
D+ ++ T++NG GD+ + ++M E +V +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW---VHVY 272
+I +DAL F +M +G + PN T + L+ C + G+W +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNS-LIRC----LCNYGRWSDASRLL 313
Query: 273 AESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMH 326
++ I K N+ +ALID + K G + A +++ + +R DI +++++ING MH
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
+A +F+ M + P+ VT+ ++ V +G F+ M ++
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVT 432
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGACRTHKNVEIAELAFQHL- 442
Y + L +AG D A +KM + PD + ++ LL + +E A + F++L
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 443 -IELEPKNPANFVMLSNIYKDLGRWQD 468
++EP +M+ + K G+ +D
Sbjct: 493 KSKMEPDIYTYNIMIEGMCK-AGKVED 518
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
R S NVL+ + + DA++ F +M V+ +P+ +L A +++ D+
Sbjct: 48 REKLSRNVLL-----DLKLDDAVDLFGEM-VQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 101
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLA 324
+ +++ +++ N LI+ + + + A+ V + + DI++ ++++NG
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
++A++L DQM QP+ VTF ++ + MV P +
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDL 220
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
YG + + L + G +D A+S ++KM +E D VI+T+++ A +KNV A F
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 442 LIE--LEPKNPANFVMLSNIYKDLGRWQDVARL 472
+ + P N + L + GRW D +RL
Sbjct: 281 MDNKGIRP-NVVTYNSLIRCLCNYGRWSDASRL 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 133/327 (40%), Gaps = 54/327 (16%)
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLI 218
G+MV +R P ++ +N LL+ A + E M ++YS+N+LI
Sbjct: 69 GEMVQSR------PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CS------------------- 258
+ R + AL +M+ G P+ TL ++L C
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 259 -----RLGALDMGKWVHVYAESI----------GYKGNMFVGNALIDMYAKCGVIESAVD 303
L G ++H A G + ++F +++ K G I+ A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 304 VFNCLDR----RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
+ +++ D++ + T+I+ L + N DAL+LF +M N +P+ VT+ ++
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDA 416
+ G D M++ I P + + + D + G L +A +M ++PD
Sbjct: 302 NYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLI 443
++SL+ H ++ A+ F+ +I
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMI 387
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 212/487 (43%), Gaps = 52/487 (10%)
Query: 2 GHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
G A +V +M E P+ +N++ G S + + EM P N FT
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP-NAFTYGA 527
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+ +A ++ + G N LCT LI Y KG V +A + M ++
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 118 VV----VWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVS 167
++ +T +++ V + +AP DV + ++I+G+ + G+M
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP--DVFSYGVLINGFSKLGNMQK 645
Query: 168 ARELFDKM------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVL 217
A +FD+M PN V+ +N LL G+ SG++ +++ +EM + N ++ +
Sbjct: 646 ASSIFDEMVEEGLTPN--VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI- 276
I GY ++G ++A F +M ++G +VP+ F ++ C RL D+ + + ++ +
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKG-LVPDSFVYTTLVDGCCRLN--DVERAITIFGTNKK 760
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--------DRRDIISWNTMINGLAMHGN 328
G + NALI+ K G E +V N L + + +++N MI+ L GN
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
A LF QM+N+ P +T+ +L+ MG + F F + I P Y
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-AAGIEPDHIMYS 879
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAV---------IWTSLLGACRTHKNVEIAELAF 439
+ + + G+ +A+ V +M +AV +LL +E+AE
Sbjct: 880 VIINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 440 QHLIELE 446
++++ L+
Sbjct: 939 ENMVRLQ 945
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 180/403 (44%), Gaps = 62/403 (15%)
Query: 92 ALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVM 151
+LIE Y + +V Y++ EM +RN+V IS Y
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIV-----ISPYT---------------------- 419
Query: 152 WSIVISGYIESGDMVSARELFDKM------PNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
+ V+ G SGD+ A + +M PN V+ + TL+ + + G +V +E
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN--VVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 206 MPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL---LACS 258
M E+ +++ +N LI G ++ R +A +F +VE + PN FT A + + S
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEA-RSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII---- 314
+ D K+V E G N + LI+ Y K G + A + + + I+
Sbjct: 537 EFASAD--KYVKEMREC-GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
++ ++NGL + DA +F +M+ PD ++ +++ + +G ++ F M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLL-GACRTHK 430
V+ + P + Y + R+G +++A + +M + P+AV + +++ G C++
Sbjct: 654 VEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG- 711
Query: 431 NVEIAELAFQHLIELEPKN--PANFVMLSNIYKDLGRWQDVAR 471
++AE AF+ E++ K P +FV + + R DV R
Sbjct: 712 --DLAE-AFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLNDVER 750
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 217/478 (45%), Gaps = 38/478 (7%)
Query: 1 MGHARKVFDKMPEP----NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ AR+VFD M + N T+N + NGY L D + + M ++ T
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++++ SK G + + +++ K G N L+ Y GS+ +A+++ M +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 117 NVV----VWTAMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSA 168
NV+ + +I+ + G + G L+D L + DVV ++ +I G E G + A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 169 RELFDKMPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIG 219
R+L ++M N V ++ N L + + +E+ + ++ +++ LI
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
Y + G S ALE ++M +G + N TL +L A + LD + A G+
Sbjct: 425 AYLKVGDLSGALEMMREMGQKG-IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII----SWNTMINGLAMHGNTADALSL 335
+ LI + + +E A+++++ + + I ++N++I GL HG T A+
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC--MADL 393
FD++ S PD TF I+ G V F ++ + H S P ++Y C + +
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH-SFKP--DNYTCNILLNG 600
Query: 394 LGRAGLLDQAVSFVRKM--PMEPDAVIWTSLLGA-CRTHKNVEIAELAFQHLIELEPK 448
L + G+ ++A++F + E D V + +++ A C+ K E A+ L E+E K
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKE----AYDLLSEMEEK 654
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 26/307 (8%)
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDVMSWNTLLNG---YA 191
L L+P ++ I +S Y+ G A ++F KM PN +++ NTLL G Y
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPN--LLTCNTLLIGLVRYP 180
Query: 192 NSGDVGSFEKVFEEMPE----RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND 247
+S + S +VF++M + NV ++NVL+ GY G+ DAL ++M+ E V P++
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
T +L A S+ G L K + + + G N N L+ Y K G ++ A +
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 308 LDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+ + D+ ++N +INGL G+ + L L D MK+ + QPD VT+ ++ C +GL
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 364 VRDGFLYFQSMVDHYSIIPQIEH-----YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+ + M + Q+ H + C + R + + V PD V
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEE--KREAVTRKVKELVDMHGFSPDIVT 418
Query: 419 WTSLLGA 425
+ +L+ A
Sbjct: 419 YHTLIKA 425
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+ T+N + NG S R+ + L M P + T ++ C + G E +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP-DVVTYNTLIDGCFELGLSLEARK 366
Query: 74 VHCVAAKRGFKWNS--------FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ G K N +LC + + V + + G P ++V + +I
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKE-EKREAVTRKVKELVDMHGFSP--DIVTYHTLI 423
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMPNR--- 178
AY+ GD+ ++ ++ + M +I ++ +++ + A L + R
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 179 -DVMSWNTLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLIGGYARNGRFSDALEA 233
D +++ TL+ G+ V ++++EM + V ++N LIGG +G+ A+E
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI--GYKGNMFVGNALIDM 291
F + L E ++P+D T +++L + G ++ K Y ESI +K + + N L++
Sbjct: 544 FDE-LAESGLLPDDSTFNSIILGYCKEGRVE--KAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 292 YAKCGVIESAVDVFNCL--DRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
K G+ E A++ FN L +R D +++NTMI+ +A L +M+ +PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 349 VTFVGILSACTHMGLVRDGFL 369
T+ +S L+ DG L
Sbjct: 661 FTYNSFISL-----LMEDGKL 676
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 65/465 (13%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+V +K P+ T+N + + YS + L M +P +T V+ K
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP-GVYTYNTVINGLCKH 318
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV----VW 121
G ++V + G +S +L+ KG V + KVF +M R+VV +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 122 TAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPN 177
++M+S + G++ + E D V+++I+I GY G + A L ++M
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 178 R----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSD 229
+ DV+++NT+L+G +G +K+F EM ER + Y+ +LI G+ + G +
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+E F++M K + + + Y N L+
Sbjct: 499 AMELFQKM-----------------------------KEKRIRLDVVTY-------NTLL 522
Query: 290 DMYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
D + K G I++A +++ + ++I IS++ ++N L G+ A+A ++D+M + +
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P + ++ G DG + + M+ +P Y + R + +A
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 406 FVRKMPME-----PDAVIWTSLL-GACRTHKNVEIAELAFQHLIE 444
V+KM E PD + S+L G CR ++ E AE+ + +IE
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE-AEVVLRKMIE 685
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 186/433 (42%), Gaps = 32/433 (7%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N +++R+ +A +RE + + +GF + C ALI G V A+ V+
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 111 GEMPER----NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIES 162
E+ NV M++A G + L E+ D+V ++ +IS Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 163 GDMVSARELFDKMPNRD----VMSWNTLLNGYANSGDVGSFEKVFEEM------PERNVY 212
G M A EL + MP + V ++NT++NG G ++VF EM P+ Y
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
L+ + G + + F M DVVP+ +++ +R G LD
Sbjct: 344 --RSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGN 328
+ G + + LI Y + G+I A+++ N + ++ D++++NT+++GL
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
+A LF++M PD T ++ +G +++ FQ M + I + Y
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK-RIRLDVVTYN 519
Query: 389 CMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
+ D G+ G +D A M + P + ++ L+ A + + +AE AF+ E+
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH--LAE-AFRVWDEM 576
Query: 446 EPKNPANFVMLSN 458
KN VM+ N
Sbjct: 577 ISKNIKPTVMICN 589
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 176/443 (39%), Gaps = 98/443 (22%)
Query: 1 MGHARKVFDKMP----EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
M A ++ + MP P T+N + NG + +FAEM R+ +P +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 57 IVVRSCSKAGAVREGEQVH-------------CVAA----------------------KR 81
+++ +C K G V E E+V C ++ +
Sbjct: 346 LLMEACKK-GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 82 GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVGSG 137
G ++ + T LI+ Y KG + A + EM ++ +VV + ++ +G
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 138 RRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNG 189
+L + ER D +I+I G+ + G++ +A ELF KM + DV+++NTLL+G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 190 YANSGDVGSFE-----------------------------------KVFEEMPERNVYS- 213
+ GD+ + + +V++EM +N+
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 214 ---WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD--MGKW 268
N +I GY R+G SD ++M+ EG VP+ + ++ R + G
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEG-FVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLA 324
+ E G ++F N+++ + + ++ A V + R D ++ MING
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 325 MHGNTADALSLFDQMKNSREQPD 347
N +A + D+M PD
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPD 726
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 149/365 (40%), Gaps = 71/365 (19%)
Query: 83 FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV----VWTAMISAYISCGDVGSGR 138
FK S +A+I + G + DA M R+ V + ++ S + +CG S
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS-- 166
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSG 194
++ ++I Y+++ + A E F + ++ + + N L+ G
Sbjct: 167 ------------VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 195 DVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTL 250
V V++E+ NVY+ N+++ ++G+ Q+ +G
Sbjct: 215 WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG--------- 265
Query: 251 VAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
VY + + Y N LI Y+ G++E A ++ N +
Sbjct: 266 --------------------VYPDIVTY-------NTLISAYSSKGLMEEAFELMNAMPG 298
Query: 311 RD----IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
+ + ++NT+INGL HG A +F +M S PD T+ +L G V +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF---VRKMPMEPDAVIWTSLL 423
F M ++P + + M L R+G LD+A+ + V++ + PD VI+T L+
Sbjct: 359 TEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 424 -GACR 427
G CR
Sbjct: 418 QGYCR 422
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 198/452 (43%), Gaps = 65/452 (14%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A ++ D+M E P T NA+ NG L D V+L M P N T
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP-NEVTYG 216
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-- 114
V++ K+G ++ +R K ++ + +I+ GS+ +A+ +F EM
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 115 --ERNVVVWTAMISAYISCGDVGSGRRLL-DLAPER---DVVMWSIVISGYIESGDMVSA 168
+ +++++T +I + G G +LL D+ + DVV +S +I +++ G + A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
EL +M R D +++ +L++G+ + + + M + N+ ++N+LI G
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + D LE F++M + G V A+++ Y
Sbjct: 397 YCKANLIDDGLELFRKMSLRG-----------------------------VVADTVTY-- 425
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLF 336
N LI + + G +E A ++F + R DI+S+ +++GL +G AL +F
Sbjct: 426 -----NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
++++ S+ + D + I+ + V D + F S+ + P ++ Y M L +
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCK 539
Query: 397 AGLLDQAVSFVRKMPME---PDAVIWTSLLGA 425
G L +A RKM + P+ + L+ A
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 136/348 (39%), Gaps = 73/348 (20%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
+++ L E D V +S +I+G G + A EL D+M
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV---------------------- 169
Query: 199 FEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
EM + + + N L+ G NG+ SDA+ +M VE PN+ T VL
Sbjct: 170 ------EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVM 222
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD----RRDI 313
+ G + + E K + + +ID K G +++A ++FN ++ + DI
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG------ 367
I + T+I G G D L M + PD V F ++ G +R+
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 368 ---------FLYFQSMVDHYSIIPQIEHYGCMADLL-------------------GRAGL 399
+ + S++D + Q++ M DL+ +A L
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 400 LDQAVSFVRKMPME---PDAVIWTSLL-GACRTHKNVEIAELAFQHLI 443
+D + RKM + D V + +L+ G C K +E+A+ FQ ++
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVAKELFQEMV 449
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 48/297 (16%)
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
V F+++ P + ++ L AR ++ L+ KQM ++G + N +TL ++
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG-IAHNLYTLSIMIN 115
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
C R L + +GY+ D ++
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEP-------------------------------DTVT 144
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
++T+INGL + G ++AL L D+M +P +T +++ G V D L MV
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLL-GACRTHKN 431
+ P YG + ++ ++G A+ +RKM ++ DAV ++ ++ G C+
Sbjct: 205 ET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS- 262
Query: 432 VEIAELAFQHLIELEPKN-PANFVMLSNIYKDL---GRWQDVARLKIAMRDTGFRKL 484
+ AF E+E K A+ ++ + + + GRW D A+L +RD RK+
Sbjct: 263 ---LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL---LRDMIKRKI 313
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 26/360 (7%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIVVRSCSKAGAVRE 70
+PN T+ + NG D+ + F +N+ AA + N V+ S K +
Sbjct: 222 QPNLVTYGVVVNGLC---KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMIS 126
+ +G + N ++LI DA ++ +M ER NVV + A+I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 127 AYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRD--- 179
A++ G + +L D +R D+ +S +I+G+ + A+ +F+ M ++D
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 180 -VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAF 234
V+++NTL+NG+ + + ++F EM +R N ++ LI G+ + +A F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
KQM+ +G V PN T +L + G L+ V Y + + ++ N +I+ K
Sbjct: 459 KQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 295 CGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
G +E D+F L + D+I +NTMI+G G +A +LF +M+ PD T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 181/427 (42%), Gaps = 54/427 (12%)
Query: 4 ARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A + D+M E P+T T+ + +G L + V L M + P N T +VV
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGVVV 232
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
K G + + + N + + +I+ DA +F EM +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 117 -NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSAREL 171
NV+ ++++IS + RLL ER +VV ++ +I +++ G +V A +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 172 FDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYAR 223
+D+M R D+ ++++L+NG+ + + +FE M + NV ++N LI G+ +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
R + +E F++M G +V N T ++ + D + V S G N
Sbjct: 413 AKRIDEGVELFREMSQRG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN-- 469
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
I+++NT+++GL +G A+ +F+ ++ S+
Sbjct: 470 -----------------------------IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+P T+ ++ G V DG+ F S+ + P + Y M R GL ++A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 404 VSFVRKM 410
+ RKM
Sbjct: 560 DALFRKM 566
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 190/449 (42%), Gaps = 74/449 (16%)
Query: 83 FKWNSFLCT-ALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL 141
F++N L A ++ + S+G+ + G N+ + +I+ + + LL
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLG--ISHNLYTYNILINCFCRRSQISLALALL 143
Query: 142 ----DLAPERDVVMWSIVISGY----------------IESG---DMVS----------- 167
L E +V S +++GY +E G D ++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 168 -----ARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSW 214
A L D+M R +++++ ++NG GD+ + +M E NV +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW---VHV 271
+ +I + DAL F +M +G V PN T + L++C + +W +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKG-VRPNVIT-YSSLISC----LCNYERWSDASRL 317
Query: 272 YAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAM 325
++ I K N+ NALID + K G + A +++ + +R DI +++++ING M
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
H +A +F+ M + P+ VT+ +++ + +G F+ M ++
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM-SQRGLVGNTV 436
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLL-GACRTHKNVEIAELAFQH 441
Y + +A D A ++M + P+ + + +LL G C+ K +E A + F++
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK-LEKAMVVFEY 495
Query: 442 L--IELEPKNPANFVMLSNIYKDLGRWQD 468
L ++EP +M+ + K G+ +D
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCK-AGKVED 523
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIVVRSCSKAGAVRE 70
+P+ T+ + NG D+ + +N+ AA + N ++ S K V
Sbjct: 220 QPDLVTYGTVVNGLC---KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMIS 126
+ +G + N +LI G DA ++ M E+ NVV + A+I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 127 AYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRD--- 179
A+ G + +L + +R D + ++++I+G+ + A+++F M ++D
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 180 -VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAF 234
+ ++NTL+NG+ V ++F EM +R N ++ +I G+ + G A F
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 235 KQMLVEGDVVPNDFTLVAVLL--ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
KQM+ + VP D ++LL CS G LD + Y + + N+F+ N +I+
Sbjct: 457 KQMV--SNRVPTDIMTYSILLHGLCS-YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 293 AKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
K G + A D+F L + D++++NTMI+GL +A LF +MK P+ T+
Sbjct: 514 CKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 352 VGILSA 357
++ A
Sbjct: 574 NTLIRA 579
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/492 (20%), Positives = 209/492 (42%), Gaps = 63/492 (12%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
EP+ T +++ NGY ++ D V L +M
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQM------------------------------ 179
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ G+K ++F T LI +A + +M +R ++V + +++
Sbjct: 180 ------VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 129 ISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
GD+ LL+ + +VV+++ +I + + A +LF +M + +V
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
+++N+L+N N G ++ M E+ NV ++N LI + + G+ +A E +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA-EKLHE 352
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+++ + P+ T ++ LD K + + S N+ N LI+ + KC
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+E V++F + +R + +++ T+I G G+ A +F QM ++R D +T+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L G + + F+ + + I Y M + + +AG + +A + +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIE---LEPKNPANFVMLSNIYKDLGRWQDV 469
+PD V + +++ + + ++ A+ F+ + E L N ++ +N+ +D R
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL-RDCDRAASA 590
Query: 470 ARLKIAMRDTGF 481
+K MR +GF
Sbjct: 591 ELIK-EMRSSGF 601
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 26/359 (7%)
Query: 103 VGDAYKVFGEM----PERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSI 154
V DA +FG+M P ++V + ++SA + G ++ L D+ +SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 155 VISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER- 209
I+ + + A + KM D+++ ++LLNGY +S + + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 210 ---NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+ +++ LI G + + S+A+ QM+ G P+ T V+ + G +D+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMING 322
+ E+ K N+ + N +ID K +E AVD+F ++ R +++++N++IN
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
L +G +DA L M + P+ VTF ++ A G + + + M+ SI P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDP 361
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL-GACRTHKNVEIAEL 437
Y + + LD+A + M + P+ + +L+ G C+ + + EL
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 176/458 (38%), Gaps = 61/458 (13%)
Query: 12 PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREG 71
P P+ +N + + + ++V+ E + + +T I + + +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKF-ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISA 127
V K G++ + ++L+ Y + DA + +M E + +T +I
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 128 YISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMP----NRD 179
L+D +R D+V + V++G + GD+ A L +KM +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFK 235
V+ +NT+++ V +F EM + NV ++N LI GR+SDA
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
ML E + PN T NALID + K
Sbjct: 318 NML-EKKINPNVVTF-----------------------------------NALIDAFFKE 341
Query: 296 GVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
G + A + + +R D I++N +ING MH +A +F M + P+ T+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM- 410
+++ V DG F+ M ++ Y + +AG D A ++M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 411 --PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
+ D + ++ LL ++ ++ A + F++L + E
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 53/289 (18%)
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
V F + + P ++ +N L+ A+ +F + +QM G + +D ++ +
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG--ISHDLYTYSIFI 125
Query: 256 AC-SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL----DR 310
C R L + V +GY+ ++ ++L++ Y I AV + + + +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
D ++ T+I+GL +H ++A++L DQM QPD VT
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT-------------------- 225
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACR 427
YG + + L + G +D A++ + KM ++ + VI+ +++ +
Sbjct: 226 ----------------YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 428 THKNVEIAELAFQHLIELEPK----NPANFVMLSNIYKDLGRWQDVARL 472
+++VE+A F E+E K N + L N + GRW D +RL
Sbjct: 270 KYRHVEVAVDLFT---EMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 185/412 (44%), Gaps = 44/412 (10%)
Query: 90 CTALIEMYSAKGSVGDAYKVF------GEMPERNVVVWTAMISAYISCGDVGSGRRLLD- 142
CT LI + G A K+ G +P+ V+ + MIS Y G++ + +LD
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPD--VITYNVMISGYCKAGEINNALSVLDR 197
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNGYANSGDVGS 198
++ DVV ++ ++ +SG + A E+ D+M RD V+++ L+ VG
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 199 FEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
K+ +EM +R +V ++NVL+ G + GR +A++ M G PN T +L
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIIL 316
Query: 255 LA-CSRLGALDMGKWVHVYAESI-------GYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
+ CS G+W+ AE + G+ ++ N LI+ + G++ A+D+
Sbjct: 317 RSMCS------TGRWMD--AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 307 CLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+ + + +S+N +++G A+ ++M + PD VT+ +L+A G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIW 419
V D + P + Y + D L +AG +A+ + +M ++PD + +
Sbjct: 429 KVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+SL+G V+ A + F H E P N V ++I L + + R
Sbjct: 488 SSLVGGLSREGKVDEA-IKFFHEFERMGIRP-NAVTFNSIMLGLCKSRQTDR 537
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 186/433 (42%), Gaps = 64/433 (14%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+ T+N M +GY ++ + ++R + +P + T ++RS +G +++ +
Sbjct: 170 PDVITYNVMISGYC---KAGEINNALSVLDRMSVSP-DVVTYNTILRSLCDSGKLKQAME 225
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYI 129
V +R + T LIE VG A K+ EM +R +VV + +++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 130 SCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVM 181
G + + L+ P + +V+ +I++ +G + A +L M + V+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQM 237
++N L+N G +G + E+MP+ N S+N L+ G+ + + A+E ++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ G Y + + Y N ++ K G
Sbjct: 406 VSRG-----------------------------CYPDIVTY-------NTMLTALCKDGK 429
Query: 298 IESAVDVFNCLDRRD----IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+E AV++ N L + +I++NT+I+GLA G T A+ L D+M+ +PD +T+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM--- 410
++ + G V + +F + I P + + L ++ D+A+ F+ M
Sbjct: 490 LVGGLSREGKVDEAIKFFHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 411 PMEPDAVIWTSLL 423
+P+ +T L+
Sbjct: 549 GCKPNETSYTILI 561
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 152/328 (46%), Gaps = 26/328 (7%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+GHA K+ D+M + P+ T+N + NG + + +M + P N T
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP-NVITHN 313
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
I++RS G + E++ ++GF + LI KG +G A + +MP+
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 117 ----NVVVWTAMISAYISCGDVGSGR------RLLDLAPERDVVMWSIVISGYIESGDMV 166
N + + ++ + C + R R++ D+V ++ +++ + G +
Sbjct: 374 GCQPNSLSYNPLLHGF--CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 167 SARELFDKMPNRD----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLI 218
A E+ +++ ++ ++++NT+++G A +G G K+ +EM +++ +++ L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
GG +R G+ +A++ F + G + PN T +++L + D V+ + G
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFN 306
K N LI+ A G+ + A+++ N
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 25/268 (9%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAF 234
D++ TL+ G+ G K+ E + +V ++NV+I GY + G ++AL
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLG----ALDMGKWVHVYAESIGYKGNMFVGNALID 290
+M V DVV + T++ L +L LD Y + I Y LI+
Sbjct: 196 DRMSVSPDVVTYN-TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY-------TILIE 247
Query: 291 MYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+ + A+ + + + R D++++N ++NG+ G +A+ + M +S QP
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ +T IL + G D M+ P + + + + L R GLL +A+
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 407 VRKMPM---EPDAVIWTSLL-GACRTHK 430
+ KMP +P+++ + LL G C+ K
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
N + TL +GY+NS G + V +V S N L R G + + +
Sbjct: 69 NGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL-RQMVRTGELEEGFKFLEN 127
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+ G+V P+ ++ RLG + E G ++ N +I Y K G
Sbjct: 128 MVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
I +A+ V LDR D++++NT++ L G A+ + D+M PD +T+
Sbjct: 187 EINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP- 411
++ A V M D P + Y + + + + G LD+A+ F+ MP
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDR-GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 412 --MEPDAVIWTSLLGA-CRTHK 430
+P+ + +L + C T +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGR 324
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 200/447 (44%), Gaps = 67/447 (14%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A ++ D+M E P+ T N + NG L+ + ++L +M P N T
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP-NAVTYG 232
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
V+ K+G ++ +R K ++ + +I+ GS+ +A+ +F EM +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLL-DLAPER---DVVMWSIVISGYIESGDMVSA 168
N++ + +I + + G G +LL D+ + +VV +S++I +++ G + A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
EL +M +R D +++ +L++G+ + ++ + M + N+ ++N+LI G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + R D LE F++M + G V A+++ Y
Sbjct: 413 YCKANRIDDGLELFRKMSLRG-----------------------------VVADTVTY-- 441
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLF 336
N LI + + G + A ++F + R +I+++ +++GL +G + AL +F
Sbjct: 442 -----NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
++++ S+ + D + I+ + V D + F S+ + P ++ Y M L +
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCK 555
Query: 397 AGLLDQAVSFVRKMPME---PDAVIWT 420
G L +A RKM + PD WT
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDG--WT 580
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 188/450 (41%), Gaps = 27/450 (6%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R + P P ++ +F+ + T+ + V+ L +M A N +TL I++ +
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCR 135
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVV 120
+ K G++ N+ + LI +G V +A ++ M E +++
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMP 176
+++ G L+D E + V + V++ +SG A EL KM
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 177 NR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFS 228
R D + ++ +++G G + + +F EM + N+ ++N+LIGG+ GR+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
D + + M ++ + PN T ++ + + G L + +H G + +L
Sbjct: 316 DGAKLLRDM-IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 289 IDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
ID + K ++ A + + + + +I ++N +ING D L LF +M
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
D VT+ ++ +G + FQ MV + P I Y + D L G ++A+
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 405 SF---VRKMPMEPDAVIWTSLL-GACRTHK 430
+ K ME D I+ ++ G C K
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 145/345 (42%), Gaps = 57/345 (16%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
N T+N + G+ D L +M + P N T +++ S K G +RE E++
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP-NVVTFSVLIDSFVKEGKLREAEEL 355
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYIS 130
H RG ++ T+LI+ + + + A ++ M + N+ + +I+ Y
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 131 CGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMS 182
+ G L R D V ++ +I G+ E G + A+ELF +M +R ++++
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERN-------------------------------- 210
+ LL+G ++G+ ++FE++ +
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 211 -------VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
V ++N++IGG + G S+A F++M +G P+ +T ++ A LG
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH-APDGWTYNILIRA--HLGDG 592
Query: 264 DMGKWVHVYAE--SIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
D K V + E G+ + +IDM + + +S +D+ +
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 72/320 (22%)
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
F + P V ++ L A+ ++ L KQM ++G + N +TL ++
Sbjct: 76 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG-IAHNLYTLSIMINCFC 134
Query: 259 RLGAL-----DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL----D 309
R L MGK + +GY+ N + LI+ G + A+++ + +
Sbjct: 135 RCRKLCLAFSAMGKII-----KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
+ D+I+ NT++NGL + G A+A+ L D+M QP+ VT
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT------------------- 230
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC 426
YG + +++ ++G A+ +RKM ++ DAV ++ ++
Sbjct: 231 -----------------YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 427 RTHKNVEIAELAFQHLIELEPKNPANFVMLSNI----YKDLGRWQDVARLKIAMRDTGFR 482
H +++ AF E+E K ++ NI + + GRW D A+L +RD R
Sbjct: 274 CKHGSLDN---AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL---LRDMIKR 327
Query: 483 KLPGCSVIECNDSVVEFYSL 502
K+ N +VV F L
Sbjct: 328 KI--------NPNVVTFSVL 339
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 217/506 (42%), Gaps = 45/506 (8%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+ A +++ G + + L + +P N F ++ S K E E
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP-NLFVYNALIDSLCKGRKFHEAEL 388
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYI 129
+ K G + N + LI+M+ +G + A GEM + +V + ++I+ +
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 130 SCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVM 181
GD+ + +++ E VV ++ ++ GY G + A L+ +M + +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLIGGYARNGRFSDALEAFKQM 237
++ TLL+G +G + K+F EM E NV ++NV+I GY G S A E K+M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG----NALIDMYA 293
+G +VP+ ++ ++ G K V+ + + +KGN + L+ +
Sbjct: 569 TEKG-IVPDTYSYRPLIHGLCLTGQASEAK---VFVDGL-HKGNCELNEICYTGLLHGFC 623
Query: 294 KCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+ G +E A+ V + +R D++ + +I+G H + L +M + +PD V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
+ ++ A + G ++ F + M++ +P Y + + L +AG +++A K
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 410 M-PME--PDAVIWTSLL-----GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYK 461
M P+ P+ V + L G K VE+ + L+ N A + ML +
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL----ANTATYNMLIRGFC 798
Query: 462 DLGRWQDVARLKIAMRDTGFRKLPGC 487
GR ++ + L M G P C
Sbjct: 799 RQGRIEEASELITRMIGDGVS--PDC 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 177/422 (41%), Gaps = 29/422 (6%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G ++ +K EP T+ ++ GY + L+ EM AP + +T ++
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP-SIYTFTTLLSG 516
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV-- 119
+AG +R+ ++ A+ K N +IE Y +G + A++ EM E+ +V
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 120 --VWTAMISAYISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFD 173
+ +I G + +D E + + ++ ++ G+ G + A +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 174 KMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV----LIGGYARNG 225
+M R D++ + L++G D F + +EM +R + +V +I ++ G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
F +A + M+ EG VPN+ T AV+ + G ++ + + + + N
Sbjct: 697 DFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 286 NALIDMYAKCGV-IESAVDVFNCLDR---RDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+D+ K V ++ AV++ N + + + ++N +I G G +A L +M
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ------IEHYGCMADLLG 395
PD +T+ +++ V+ + SM + I P + H C+A +G
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK-GIRPDRVAYNTLIHGCCVAGEMG 874
Query: 396 RA 397
+A
Sbjct: 875 KA 876
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 38/334 (11%)
Query: 142 DLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDVMSWNTLLNGYANSGD 195
DL P DVV + ++ G + + E+ D+M P+ +S +L+ G G
Sbjct: 292 DLKP--DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS--SLVEGLRKRGK 347
Query: 196 VGS----FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
+ ++V + N++ +N LI + +F +A F +M G + PND T
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG-LRPNDVTYS 406
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA----VDVFNC 307
++ R G LD G K +++ N+LI+ + K G I +A ++ N
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
++++ +++ G G AL L+ +M P TF +LS GL+RD
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL- 423
F M + +++ P Y M + G + +A F+++M + PD + L+
Sbjct: 527 VKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 424 GACRT-------------HK-NVEIAELAFQHLI 443
G C T HK N E+ E+ + L+
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 119/278 (42%), Gaps = 11/278 (3%)
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
+++LI Y R+ R D + FK M+ + ++P TL A+L + + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNT 329
S+G + ++++ +I + + A ++ ++ +I+ +N +I+GL
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
+A+ + + +PD VT+ ++ + G M+ P
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML-CLRFSPSEAAVSS 337
Query: 390 MADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHL--IE 444
+ + L + G +++A++ V+++ + P+ ++ +L+ + + AEL F + I
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L P N + +L +++ G+ M DTG +
Sbjct: 398 LRP-NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 186/432 (43%), Gaps = 27/432 (6%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
PN+ + + + S + + L EM P + T V+ K + E +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP-DAETFNDVILGLCKFDRINEAAK 308
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
+ RGF + L+ G V A +F +P+ +V++ +I +++ G
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 134 VGSGRRLLD-------LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMS 182
+ + +L + P DV ++ +I GY + G + A E+ M N+ +V S
Sbjct: 369 LDDAKAVLSDMVTSYGIVP--DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+ L++G+ G + V EM + N +N LI + + R +A+E F++M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+G P+ +T +++ + + W+ S G N N LI+ + + G I
Sbjct: 487 RKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 299 ESAVDVFNCL----DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
+ A + N + D I++N++I GL G A SLF++M P ++ +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME- 413
++ G+V + + + MV S P I + + + L RAG ++ ++ RK+ E
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 414 --PDAVIWTSLL 423
PD V + +L+
Sbjct: 665 IPPDTVTFNTLM 676
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 69/413 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ +F ++P+P +N + +G+ D + ++M + + T ++
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNVV 119
K G V +V +G K N + T L++ + G + +AY V EM + N V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKM 175
+ +ISA+ + + P + DV ++ +ISG E ++ A L M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 176 PNRDVM----SWNTLLNGYANSGDVGSFEKVFEEM----PERNVYSWNVLIGGYARNGRF 227
+ V+ ++NTL+N + G++ K+ EM + ++N LI G R G
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
A F++ML +G N ++C N
Sbjct: 581 DKARSLFEKMLRDGHAPSN--------ISC----------------------------NI 604
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
LI+ + G++E AV+ + R DI+++N++INGL G D L++F +++
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH-------------YSIIPQ 383
PD VTF ++S G V D L ++ SIIPQ
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 164/376 (43%), Gaps = 22/376 (5%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVGSGRRLLD- 142
F +++ + A + A + +M + N V++ +I + C V +LL+
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 143 ---LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGD 195
+ D ++ VI G + + A ++ ++M R D +++ L+NG G
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
V + + +F +P+ + +N LI G+ +GR DA M+ +VP+ T +++
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD----RR 311
+ G + + V + G K N++ L+D + K G I+ A +V N + +
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF 371
+ + +N +I+ +A+ +F +M +PD TF ++S + ++
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP---DAVIWTSLL-GACR 427
+ M+ ++ Y + + R G + +A V +M + D + + SL+ G CR
Sbjct: 518 RDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 428 THKNVEIAELAFQHLI 443
+ V+ A F+ ++
Sbjct: 577 AGE-VDKARSLFEKML 591
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 185/425 (43%), Gaps = 34/425 (8%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
L++ + I++ K G V + + GF + + T+LI ++ G +A V
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 110 FGEMPER---------NVV--VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG 158
F +M E NV+ V+ M + + + + +AP D ++ +I+
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP--DAYTYNTLITC 288
Query: 159 YIESGDMVSARELFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERN 210
A ++F++M + D +++N LL+ Y S KV EM +
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
+ ++N LI YAR+G +A+E QM +G P+ FT +L R G ++ +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN----CLDRRDIISWNTMINGLAMH 326
+ G K N+ NA I MY G + +F+ C DI++WNT++ +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G ++ +F +MK + P+ TF ++SA + G ++ M+D + P +
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLST 526
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNV----EIAELAF 439
Y + L R G+ +Q+ + +M +P+ + + SLL A K + +AE +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 440 QHLIE 444
+IE
Sbjct: 587 SGVIE 591
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 193/449 (42%), Gaps = 31/449 (6%)
Query: 3 HARKVFDKMPE----PNTATWNAMFNGY-SLTESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
A VF KM E P T+N + N + + + L +M AP + +T
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-DAYTYNT 284
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--- 114
++ C + +E QV GF ++ AL+++Y +A KV EM
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 115 -ERNVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSAR 169
++V + ++ISAY G + L + E+ DV ++ ++SG+ +G + SA
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 170 ELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGY 221
+F++M N ++ ++N + Y N G K+F+E+ ++ +WN L+ +
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
+NG S+ FK+M G VP T ++ A SR G+ + V+ G +
Sbjct: 465 GQNGMDSEVSGVFKEMKRAG-FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFD 337
+ N ++ A+ G+ E + V ++ + + +++ ++++ A SL +
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
++ + +P V ++ C+ L+ + F + + P I M + GR
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRR 642
Query: 398 GLLDQA---VSFVRKMPMEPDAVIWTSLL 423
++ +A + ++++ P + SL+
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 178/469 (37%), Gaps = 66/469 (14%)
Query: 3 HARKVFDKMP----EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
A KV ++M P+ T+N++ + Y+ + + L +M P + FT +
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP-DVFTYTTL 390
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP---- 114
+ +AG V + G K N A I+MY +G + K+F E+
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 115 ERNVVVWTAMISAYISCG------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA 168
++V W +++ + G V + PER+ ++ +IS Y G A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET--FNTLISAYSRCGSFEQA 508
Query: 169 ----RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLIGG 220
R + D D+ ++NT+L A G EKV EM + N ++ L+
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
YA NG+ + + + + G + P L ++L CS+ L + + G+
Sbjct: 569 YA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRR----------------------------- 311
++ N+++ +Y + ++ A V + + R
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 312 ----------DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
DIIS+NT+I + DA +F +M+NS PD +T+ + +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+ + + M+ H P Y + D + D+A FV +
Sbjct: 748 SMFEEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 194/452 (42%), Gaps = 65/452 (14%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A ++ D+M E P T N + NG L D VVL M P N T
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP-NEVTYG 232
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-- 114
V+ K+G ++ +R K ++ + +I+ GS+ +A+ +F EM
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 115 --ERNVVVWTAMISAYISCGDVGSGRRLL-DLAPER---DVVMWSIVISGYIESGDMVSA 168
+ +++ + +I + + G G +LL D+ + +VV +S++I +++ G + A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
+L +M R + +++N+L++G+ + ++ + M + ++ ++N+LI G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + R D LE F++M + G V A ++ Y
Sbjct: 413 YCKANRIDDGLELFREMSLRG-----------------------------VIANTVTY-- 441
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLF 336
N L+ + + G +E A +F + R DI+S+ +++GL +G AL +F
Sbjct: 442 -----NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+++ S+ + D ++ I+ + V D + F S+ + Y M L R
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCR 555
Query: 397 AGLLDQAVSFVRKMPME---PDAVIWTSLLGA 425
L +A RKM E PD + + L+ A
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 14/313 (4%)
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
RD +S L G V F + + P V +N L A+ ++ L KQM
Sbjct: 57 RDKLSSG--LVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 238 LVEGDVVPNDFTLVAVLLAC-SRLGALDMGKWVHVYAESIGYKGNMFVGNALID-MYAKC 295
+G + + +++++ C R L +GY+ + + N L++ + +C
Sbjct: 115 ESKG--IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 296 GVIESAVDVFNCLD---RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
V E+ V ++ + +I+ NT++NGL ++G +DA+ L D+M + QP+ VT+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L+ G + M + +I Y + D L + G LD A + +M +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 413 ---EPDAVIWTSLLGA-CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
+ D + + +L+G C + + A+L + N F +L + + G+ ++
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 469 VARLKIAMRDTGF 481
+L M G
Sbjct: 352 ADQLLKEMMQRGI 364
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 185/436 (42%), Gaps = 61/436 (13%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P++ T+N + +G + V L M P + T IVV K G +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP-DLVTYGIVVNGLCKRGDIDLAL 241
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ + + + +I+ +V DA +F EM + NVV + ++I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 129 ISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+ G RLL ER +VV +S +I +++ G +V A +L+D+M R D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
++++L+NG+ + + +FE M + NV ++N LI G+ + R + +E F++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G V GN LI + +
Sbjct: 422 MSQRGLV------------------------------------GNTVTYTTLIHGFFQAR 445
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
++A VF + DI++++ +++GL +G AL +F+ ++ S+ +PD T+
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
++ G V DG+ F S+ + P + Y M R GL ++A + R+M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 413 E---PDAVIWTSLLGA 425
E PD+ + +L+ A
Sbjct: 565 EGPLPDSGTYNTLIRA 580
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 21/294 (7%)
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLI 218
GDMV +R P ++ ++ LL+ A + E+M N+Y++++LI
Sbjct: 70 GDMVKSR------PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLGALDMGKWVHVYAESIG 277
+ R + S AL +M+ G P+ TL ++L C D V E +G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-MG 181
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADAL 333
Y+ + F N LI + AV + + + + D++++ ++NGL G+ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
SL +M+ + +P V + I+ A + V D F M D+ I P + Y +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRC 300
Query: 394 LGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
L G A + M + P+ V +++L+ A + AE + +I+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 186/424 (43%), Gaps = 28/424 (6%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P+ +T+N + R +++ +M P + T V++ + G +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGDLDGAL 244
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN-----VVVWTAMISA 127
++ + G W++ ++ + +G V DA EM ++ + +++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 128 YISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRD---- 179
G V ++D+ + DV ++ VISG + G++ A E+ D+M RD
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGY--ARNGRFSDALEA 233
+++NTL++ V ++ + + +V ++N LI G RN R A+E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMEL 422
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++M +G P++FT ++ + G LD + E G ++ N LID +
Sbjct: 423 FEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 294 KCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
K A ++F+ ++ R+ +++NT+I+GL DA L DQM ++PD
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T+ +L+ G ++ Q+M + P I YG + L +AG ++ A +R
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 410 MPME 413
+ M+
Sbjct: 601 IQMK 604
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 178/445 (40%), Gaps = 59/445 (13%)
Query: 20 NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
N + +G+ D + EM+ + +T +V KAG V+ ++ V
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVG 135
+ G+ + + ++I G V +A +V +M R N V + +IS V
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 136 SGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKM------PN-------- 177
L + + DV ++ +I G + + A ELF++M P+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 178 -------------------------RDVMSWNTLLNGYANSGDVGSFEKVFEEMP----E 208
R V+++NTL++G+ + E++F+EM
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
RN ++N LI G ++ R DA + QM++EG P+ +T ++L R G +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLA 324
+ S G + ++ LI K G +E A + + + I ++N +I GL
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 325 MHGNTADALSLFDQMKNSREQ-PDGVTFVGILSA-CTHMGLVRDGFLYFQSMVDHYSIIP 382
T +A++LF +M E PD V++ + C G +R+ + +++ +P
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK-GFVP 680
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFV 407
+ +A+ L + + V V
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLV 705
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 17/259 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR + K P+ T+N++ G LT +HR + LF EM P + FT +++ S
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-DEFTYNMLIDSLC 446
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNVV 119
G + E + G + LI+ + +A ++F EM RN V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 120 VWTAMISAYISCGDVGSGRRLLDL----APERDVVMWSIVISGYIESGDMVSARELFDKM 175
+ +I V +L+D + D ++ +++ + GD+ A ++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 176 PNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLIGGYARNGRF 227
+ D++++ TL++G +G V K+ + + + +++N +I G R +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 228 SDALEAFKQMLVEGDVVPN 246
++A+ F++ML + + P+
Sbjct: 627 TEAINLFREMLEQNEAPPD 645
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 16/277 (5%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAF 234
D +N +LN + + E +M + +V ++NVLI R + A+
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+ M G +VP++ T V+ G LD + G + N ++ + K
Sbjct: 213 EDMPSYG-LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 295 CGVIESAVDVFNCLDRRD-----IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
G +E A++ + +D ++NT++NGL G+ A+ + D M PD
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T+ ++S +G V++ M+ P Y + L + +++A R
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 410 MPME---PDAVIWTSLL-GACRTHKNVEIAELAFQHL 442
+ + PD + SL+ G C T +N +A F+ +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLT-RNHRVAMELFEEM 426
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 196/436 (44%), Gaps = 27/436 (6%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A + D+M E P+ T + + NG L + +VL M P P
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++ R C K+G + +R K + + +I+ GS DA +F EM +
Sbjct: 216 VLNRLC-KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSA 168
+VV ++++I + G G ++L R DVV +S +I +++ G ++ A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGG 220
+EL+++M R D +++N+L++G+ + ++F+ M E ++ ++++LI
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + R D + F+++ +G ++PN T ++L + G L+ K + S G
Sbjct: 395 YCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII----SWNTMINGLAMHGNTADALSLF 336
++ L+D G + A+++F + + + +N +I+G+ DA SLF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+ + +PD VT+ ++ G + + + F+ M + + + LG
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 397 AGLLDQAVSFVRKMPM 412
+GL+ +V + +M +
Sbjct: 574 SGLI-SSVELIEEMKV 588
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 194/439 (44%), Gaps = 48/439 (10%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPI-VVRSCSKAGAVREGEQV--HCVAAK-RGFKWNSFL 89
D + LF M ++ P PI R CS ++ + V C + G + + +
Sbjct: 53 DAIDLFESMIQSRPLPT-----PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 90 CTALIEMYSAKGSVGDAYKVFGEM----PERNVVVWTAMISAYISCGDVGSG----RRLL 141
T +I Y K + A+ V G E + + ++ +++ + G V R++
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 142 DLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNGYANSGDVG 197
++ D+V S +I+G G + A L D+M D +++ +LN SG+
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 198 SFEKVFEEMPERN----VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
+F +M ERN V ++++I ++G F DAL F +M ++G + D +
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSS 285
Query: 254 LLACSRLGALDMGKW---VHVYAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCL 308
L+ G + GKW + E IG ++ +ALID++ K G + A +++N +
Sbjct: 286 LIG----GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 309 DRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
R D I++N++I+G +A +FD M + +PD VT+ ++++ V
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTS 421
DG F+ + +IP Y + ++G L+ A ++M + P V +
Sbjct: 402 DDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 422 LL-GAC---RTHKNVEIAE 436
LL G C +K +EI E
Sbjct: 461 LLDGLCDNGELNKALEIFE 479
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 122/268 (45%), Gaps = 26/268 (9%)
Query: 223 RNG----RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
RNG + +DA++ F+ M ++ +P + A +R D+ E G
Sbjct: 43 RNGIVDIKVNDAIDLFESM-IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-------DIISWNTMINGLAMHGNTAD 331
+ +M+ +I+ Y + + + F+ L R D I+++T++NG + G ++
Sbjct: 102 EHDMYTMTIMINCYCR---KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
A++L D+M +++PD VT +++ G V + + MV+ Y P YG +
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPVL 217
Query: 392 DLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
+ L ++G A+ RKM ++ V ++ ++ + + + A F E+E K
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN---EMEMK 274
Query: 449 N-PANFVMLSNIYKDL---GRWQDVARL 472
A+ V S++ L G+W D A++
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKM 302
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 186/432 (43%), Gaps = 53/432 (12%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+PNT T+N + +G L + + L M P + T +VV K G
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP-DLVTYGVVVNGLCKRGDTDLAF 241
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ + + + +I+ + DA +F EM + NVV ++++IS
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 129 ISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDV---- 180
+ G RLL ER DV +S +I +++ G +V A +L+D+M R +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
+++++L+NG+ + +++FE M + +V ++N LI G+ + R + +E F++
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G +V N T ++ + G DM + + S G N
Sbjct: 422 MSQRG-LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN--------------- 465
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
I+++NT+++GL +G A+ +F+ ++ S+ +P T+ ++
Sbjct: 466 ----------------IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME--- 413
G V DG+ F ++ + P + Y M R G ++A + ++M +
Sbjct: 510 GMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 414 PDAVIWTSLLGA 425
P++ + +L+ A
Sbjct: 569 PNSGCYNTLIRA 580
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 191/461 (41%), Gaps = 65/461 (14%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTAL 93
DVV+ E + P NH+T I++ + + V K G++ N ++L
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 157
Query: 94 IEMYSAKGSVGDAYKVFGEM----PERNVVVWTAMISAYISCGDVGSGRRLLDLAPER-- 147
+ Y + +A + +M + N V + +I L+D +
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 148 --DVVMWSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNGYANSGDVGSFEK 201
D+V + +V++G + GD A L +KM V+ +NT+++G +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 202 VFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+F+EM + NV +++ LI GR+SDA M +E + P+ FT
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTF------- 329
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DI 313
+ALID + K G + A +++ + +R I
Sbjct: 330 ----------------------------SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
++++++ING MH +A +F+ M + PD VT+ ++ V +G F+
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL-GACRTH 429
M ++ Y + L +AG D A ++M + P+ + + +LL G C+
Sbjct: 422 M-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 430 KNVEIAELAFQHL--IELEPKNPANFVMLSNIYKDLGRWQD 468
K +E A + F++L ++EP +M+ + K G+ +D
Sbjct: 481 K-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK-AGKVED 519
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 193/448 (43%), Gaps = 57/448 (12%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A + D+M E P+T T+ + +G L + V L +M + P + T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP-DLVTYG 227
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
VV K G + + K + + + +I+ + DA +F EM +
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSA 168
+V ++++IS + G RLL ER +VV +S +I +++ G +V A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
+L+D+M R D+ ++++L+NG+ + + +FE M + NV +++ LI G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
+ + R + +E F++M G +V N T ++ + D + V S+G
Sbjct: 408 FCKAKRVEEGMELFREMSQRG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
N I+++N +++GL +G A A+ +F+ ++
Sbjct: 467 N-------------------------------ILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
S +PD T+ ++ G V DG+ F ++ + P + Y M R G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 401 DQAVSFVRKMPME---PDAVIWTSLLGA 425
++A S ++KM + P++ + +L+ A
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 54/406 (13%)
Query: 103 VGDAYKVFGEM----PERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSI 154
V DA +FG+M P ++V + ++SA + G ++ L D+ +SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 155 VISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER- 209
I+ + + A + KM D+++ ++LLNGY +S + + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 210 ---NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+ +++ LI G + + S+A+ QM+ G P+ T V+ + G +D+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
+ E G IE+ D++ +NT+I+GL +
Sbjct: 243 LSLLKKMEK--------------------GKIEA-----------DVVIYNTIIDGLCKY 271
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
+ DAL+LF +M N +PD T+ ++S + G D M++ I P +
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVT 330
Query: 387 YGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+ + D + G L +A +M ++PD ++SL+ H ++ A+ F+ +I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSV 489
+ N V S + K + + V R+ R L G +V
Sbjct: 391 SKDC--FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 158/382 (41%), Gaps = 96/382 (25%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNR-------------- 178
+++ L E D+V S +++GY S + A L D+M P+
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 179 -------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWN 215
D++++ T++NG GD+ + ++M E +V +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW---VHVY 272
+I G + DAL F +M +G + P+ FT + L++C + G+W +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFT-YSSLISC----LCNYGRWSDASRLL 316
Query: 273 AESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMH 326
++ I K N+ +ALID + K G + A +++ + +R DI +++++ING MH
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM---------VDH 377
+A +F+ M + P+ VT+ ++ V +G F+ M V +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 378 YSII-------------------------PQIEHYGCMADLLGRAGLLDQAV---SFVRK 409
++I P I Y + D L + G L +A+ ++++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 410 MPMEPDAVIWTSLL-GACRTHK 430
MEPD + ++ G C+ K
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGK 518
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 3 HARKVFDKMP----EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
A K++D+M +P+ T++++ NG+ + + + +F M P N T +
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYSTL 404
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP---- 114
++ KA V EG ++ ++RG N+ T LI + +A VF +M
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARE 170
N++ + ++ G + + + E D+ ++I+I G ++G + E
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 171 LFDKMPNR----DVMSWNTLLNGYANSGDVGS----FEKVFEEMPERNVYSWNVLIGGYA 222
LF + + +V+++NT+++G+ G +K+ E+ P N ++N LI
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 223 RNGRFSDALEAFKQM 237
R+G + E K+M
Sbjct: 585 RDGDREASAELIKEM 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 186/448 (41%), Gaps = 57/448 (12%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A + D+M E P+T T+ + +G L + V L M + P N T
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYG 154
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
+VV K G + + + + + +I+ V DA +F EM +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSA 168
NVV ++++IS S G +LL E+ + V ++ +I +++ G V A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY----SWNVLIGG 220
+L D M R D+ ++N+L+NG+ + +++FE M ++ + ++N LI G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
+ ++ R D E F++M G +V + T ++ G D + V S G
Sbjct: 335 FCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
DI++++ +++GL +G AL +FD M+
Sbjct: 394 -------------------------------DIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
S + D + ++ G V DG+ F S+ + P + Y M L LL
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 401 DQAVSFVRKMPME---PDAVIWTSLLGA 425
+A + ++KM + PD+ + +L+ A
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 172/426 (40%), Gaps = 69/426 (16%)
Query: 83 FKWNSFLCT-ALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL 141
F++N L A ++ + S+G+ + G N+ + +I+ + + LL
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLG--ISHNLYTYNILINCFCRRSQISLALALL 68
Query: 142 ----DLAPERDVVMWSIVISGY----------------IESG---DMVS----------- 167
L E +V S +++GY +E G D ++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 168 -----ARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSW 214
A L D+M R +++++ ++NG GD+ + +M E +V +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW---VHV 271
N +I + DAL FK+M +G + PN T + L++C G+W +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVT-YSSLISC----LCSYGRWSDASQL 242
Query: 272 YAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAM 325
++ I K N+ NALID + K G A + + + +R DI ++N++ING M
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
H A +F+ M + PD T+ ++ V DG F+ M H ++
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTV 361
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGACRTHKNVEIAELAFQHL 442
Y + L G D A ++M + PD + ++ LL + +E A F ++
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 443 IELEPK 448
+ E K
Sbjct: 422 QKSEIK 427
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 183/424 (43%), Gaps = 82/424 (19%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P T +NA+ GY T +D + +EM + +P H T +++ + AG
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH-TYSLLIDAYVNAGRWESAR 394
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM------PER---NVVVWTA 123
V + NSF+ + L+ + +G ++V EM P+R NVV+ T
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 124 MISAYISCGD--VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
+C D + + R+L E D V W+ +I + + G + A E+F+ M R +
Sbjct: 455 ---GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 182 ----SWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEA 233
++N ++N Y + +++ +M + NV + L+ Y ++GRF+DA+E
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
++M +S+G K + + NALI+ YA
Sbjct: 572 LEEM------------------------------------KSVGLKPSSTMYNALINAYA 595
Query: 294 KCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+ G+ E AV+ F + + +++ N++IN A+A ++ MK + +PD V
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH----YGCMADLLGRAGLLDQAVS 405
T+ ++ A L+R VD + +P + GC D R+ +L A+
Sbjct: 656 TYTTLMKA-----LIR---------VDKFQKVPVVYEEMIMSGCKPDRKARS-MLRSALR 700
Query: 406 FVRK 409
++++
Sbjct: 701 YMKQ 704
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 22/350 (6%)
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPN----RDVMSWNTLLNGYANSGDVGS------F 199
+ ++ +I + D+ A L KM D ++++ ++ S + S +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+++ + E +V N +I G+A++G S AL+ G + TLV+++ A +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG-LSAKTATLVSIISALAD 316
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIIS 315
G + + G K NAL+ Y K G ++ A + + +++R D +
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
++ +I+ G A + +M+ QP+ F +L+ G + F + M
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM- 435
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNV 432
+ P + Y + D G+ LD A++ +M +EPD V W +L+ H
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 433 EIAELAFQHLIELEPKNP--ANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+AE F+ + E P + ++ N Y D RW D+ RL M+ G
Sbjct: 496 IVAEEMFEAM-ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 141/350 (40%), Gaps = 62/350 (17%)
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNT-----LLNGYANSGDVGSFE 200
E DV + + +I G+ +SGD A +L M +S T +++ A+SG E
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 201 KVFEEMPERNVY----SWNVLIGGYARNGRFSDALEAFKQM------------------- 237
+FEE+ + + ++N L+ GY + G DA +M
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 238 ---------------LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-----ESIG 277
+ GDV PN F +L G D G+W + +SIG
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLL-----AGFRDRGEWQKTFQVLKEMKSIG 439
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADAL 333
K + N +ID + K ++ A+ F+ + D ++WNT+I+ HG A
Sbjct: 440 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+F+ M+ P T+ ++++ D M I+P + + + D+
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTHTTLVDV 558
Query: 394 LGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
G++G + A+ + +M ++P + ++ +L+ A E A AF+
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 165/336 (49%), Gaps = 22/336 (6%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
N +N + N + + D +F E+ + + P + ++ K G + EG ++
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQP-TVVSFNTLINGYCKVGNLDEGFRL 297
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYIS 130
K + + F +ALI + + A+ +F EM +R N V++T +I +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 131 CGDVG----SGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMS 182
G++ S +++L + D+V+++ +++G+ ++GD+V+AR + D M R D ++
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLIGGYARNGRFSDALEAFKQML 238
+ TL++G+ GDV + ++ +EM + + ++ L+ G + GR DA A ++ML
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G + P+D T ++ A + G G + +S G+ ++ N L++ K G +
Sbjct: 478 RAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 299 ESAVDVFNCLDR----RDIISWNTMINGLAMHGNTA 330
++A + + + D I++NT++ G H N++
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS 572
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 167/364 (45%), Gaps = 26/364 (7%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFG-------EMPERNVVVWTAMISAYISCGDV-GSGRR 139
FL AL+ Y+ G + DA + F ++P R + G + G
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNGYANSGD 195
+LD +V +++I+++ + + G++ A+++FD++ R V+S+NTL+NGY G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 196 VGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
+ ++ +M + +V++++ LI + + A F +M G ++PND
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG-LIPNDVIFT 349
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
++ SR G +D+ K + S G + ++ + N L++ + K G + +A ++ + + RR
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 312 ----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
D I++ T+I+G G+ AL + +M + + D V F ++ G V D
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL- 423
+ M+ I P Y M D + G +++M + P V + LL
Sbjct: 470 ERALREML-RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 424 GACR 427
G C+
Sbjct: 529 GLCK 532
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 163/373 (43%), Gaps = 60/373 (16%)
Query: 82 GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN----VVVWTAMISAYISCGDVGSG 137
GF N ++ L+ + +G++ DA KVF E+ +R+ VV + +I+ Y G++ G
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 138 RRL---LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS----WNTLLNG 189
RL ++ + R DV +S +I+ + M A LFD+M R ++ + TL++G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 190 YANSGDVG----SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
++ +G++ S++K+ + + ++ +N L+ G+ +NG A M+ G
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG---- 410
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ + I Y LID + + G +E+A+++
Sbjct: 411 -------------------------LRPDKITY-------TTLIDGFCRGGDVETALEIR 438
Query: 306 NCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
+D+ D + ++ ++ G+ G DA +M + +PD VT+ ++ A
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVI 418
G + GF + M +P + Y + + L + G + A + M + PD +
Sbjct: 499 GDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 419 WTSLLGACRTHKN 431
+ +LL H N
Sbjct: 558 YNTLLEGHHRHAN 570
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 22/308 (7%)
Query: 226 RFSDALEAFKQMLVEGDVVPNDF-TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
+ +ALE + +G +V DF L+ + C + AL+ + VH + +
Sbjct: 92 KIREALEVIDILEDKGYIV--DFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSY--- 146
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
+ +I+MY+ C + A++VFN + +R+ +W TMI LA +G A+ +F +
Sbjct: 147 -HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGN 205
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+PD F + AC +G + +G L+F+SM Y ++ +E Y + ++L G LD+A+
Sbjct: 206 KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
FV +M +EP +W +L+ C +E+ + F LI + + + SN
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGYLELGD-RFAELI--KKLDASRMSKESNAGLVAA 322
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVI--ECNDSVVEFYSLDERHPETESIYRALRGLTML 522
+ D A K+ ++L C +I + + EF + D H T S +R+L+ +
Sbjct: 323 KASDSAMEKL-------KELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLD 375
Query: 523 LRLHGYVP 530
+ G+VP
Sbjct: 376 I---GFVP 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+ G +E+ + AR + D + D S++T++ Y+ VF EMP+RN +W
Sbjct: 121 LCGEVEA--LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I A+NG A++ F + + EG+ P+ AV AC +G ++ G ++ ES
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGN-KPDKEIFKAVFFACVSIGDINEGL---LHFES 234
Query: 276 IGYKGNMFVGNA----LIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHG--- 327
+ M + +I+M A CG ++ A+D + + W T++N + G
Sbjct: 235 MYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
Query: 328 ---NTADALSLFDQMKNSREQPDGV 349
A+ + D + S+E G+
Sbjct: 295 LGDRFAELIKKLDASRMSKESNAGL 319
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 161/374 (43%), Gaps = 57/374 (15%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
EP+ T ++ NG+ D V L +M P + ++ S K V +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP-DIVAYNAIIDSLCKTKRVNDAF 210
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
++G + N TAL+ DA ++ +M ++ NV+ ++A++ A+
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 129 ISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+ G V + L + ++ + D+V +S +I+G + A ++FD M ++ DV
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
+S+NTL+NG+ + V K+F EM +R N ++N LI G+ + G A E F Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M DF G +++ N L+ G
Sbjct: 391 M---------DF---------------------------FGISPDIWTYNILLGGLCDNG 414
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+E A+ +F + +R DI+++ T+I G+ G +A SLF + +PD VT+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 353 GILSACTHMGLVRD 366
++S GL+ +
Sbjct: 475 TMMSGLCTKGLLHE 488
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 171/374 (45%), Gaps = 39/374 (10%)
Query: 103 VGDAYKVFGEM----PERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSI 154
+ DA +F +M P ++V + ++SA + + G+++ L D+ ++I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 155 VISGYIESGDMVSARELFDKM------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
VI+ + + A + KM P+R ++ +L+NG+ V + ++M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDR--VTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 209 ----RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
++ ++N +I + R +DA + FK++ +G + PN T A++ G +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVN-----GLCN 237
Query: 265 MGKW---VHVYAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIIS 315
+W + ++ I K N+ +AL+D + K G + A ++F + R DI++
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
++++INGL +H +A +FD M + D V++ +++ V DG F+ M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM- 356
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNV 432
++ Y + +AG +D+A F +M + PD + LLG + +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 433 EIAELAFQHLIELE 446
E A + F+ + + E
Sbjct: 417 EKALVIFEDMQKRE 430
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 32/360 (8%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
EP+ T+ ++ NGY D + LF ++ P N T ++R K +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP-NVVTYTTLIRCLCKNRHLNHAV 208
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
++ G + N AL+ G GDA + +M +R NV+ +TA+I A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 129 ISCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNR 178
+ G + + L + ++ DV + +I+G G + AR++F M PN
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAF 234
+ + TL++G+ S V K+F EM ++ N ++ VLI GY GR A E F
Sbjct: 329 VI--YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 235 KQMLVEGDVVPNDFTLVAVLL---ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
QM P D VLL C+ G ++ + Y N+ +I
Sbjct: 387 NQM--SSRRAPPDIRTYNVLLDGLCCN--GKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 292 YAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
K G +E A D+F L + ++I++ TMI+G G +A SLF +MK P+
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R + + EPN T+ A+ + + + L+ M + + P + FT ++
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP-DVFTYGSLINGLCM 305
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVV 120
G + E Q+ + + G N + T LI + V D K+F EM ++ N +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMP 176
+T +I Y G + + + R D+ +++++ G +G + A +F+ M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 177 NRD----VMSWNTLLNGYANSGDVGS----FEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R+ ++++ ++ G G V F +F + + NV ++ +I G+ R G
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 229 DALEAFKQMLVEGDVVPND 247
+A FK+M +G +PN+
Sbjct: 486 EADSLFKKMKEDG-FLPNE 503
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 165/371 (44%), Gaps = 28/371 (7%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDVMSWNTLLNGYAN 192
+++ L E D+V ++ +++GY + A LFD++ PN V+++ TL+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN--VVTYTTLIRCLCK 200
Query: 193 SGDVGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
+ + ++F +M NV ++N L+ G GR+ DA + M+ + + PN
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM-KRRIEPNVI 259
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
T A++ A ++G L K ++ + ++F +LI+ G+++ A +F +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 309 DRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
+R + + + T+I+G D + +F +M + +T+ ++ +G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV---SFVRKMPMEPDAVIWTS 421
F M + P I Y + D L G +++A+ ++RK M+ + V +T
Sbjct: 380 DVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 422 LL-GACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
++ G C+ K VE A F L ++P M+S + G + L M++
Sbjct: 439 IIQGMCKLGK-VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR-GLIHEADSLFKKMKE 496
Query: 479 TGFRKLPGCSV 489
GF LP SV
Sbjct: 497 DGF--LPNESV 505
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 33/431 (7%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKR---GFKWNSFLC 90
D LF EM + P ++ R + +R E V + K G + +
Sbjct: 54 DAFALFFEMVHSQPLP----SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSF 109
Query: 91 TALIEMYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISAYISCGDVGSGRRLLDL--- 143
T LI + + A V G+M E ++V + +++ + +G L+ L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 144 -APERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGS 198
E +VV+++ +I G ++G++ A EL ++M + DV+++NTLL G SG
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 199 FEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
++ +M +R +V ++ LI + + G +A E +K+M ++ V PN+ T +++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSII 288
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD----R 310
G L K S G N+ N LI + K +++ + +F +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
DI ++NT+I+G G AL +F M + R PD +T +L G + +
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWT-SLLGAC 426
F M + I I Y M L +A +++A ++P+E PDA +T +LG C
Sbjct: 409 FDDMRESEKYIG-IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 427 RTHKNVEIAEL 437
+ E EL
Sbjct: 468 KNGPRREADEL 478
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 157 SGYIESGDMVSARELFDKM----PNRDVMSWNTLLNGYANSGDVGSFEKV--FEEMPE-- 208
+G++ S A LF +M P ++ + LL AN + +E V F + E
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATAN---LRRYETVIYFSQKMELY 100
Query: 209 ---RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL---LACSRLGA 262
++YS+ +LI + R R S AL +M+ G P+ T ++L +R+G
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIG- 158
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNT 318
D V + +S GY+ N+ V N LID K G + A+++ N ++++ D++++NT
Sbjct: 159 -DAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
++ GL G +DA + M PD VTF ++ G + + ++ M+
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS- 275
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL-GACR 427
S+ P Y + + L G L A M + P+ V + +L+ G C+
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 71/397 (17%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
++ + + G V +++ A G+ + +ALI Y G +A VF M E
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 117 ---NVVVWTAMISAYISCGDVG----SGRRLLD------LAPERDVVMWSIVISGYIESG 163
N+V + A+I A CG G + D + P+R + ++ +++ G
Sbjct: 299 LRPNLVTYNAVIDA---CGKGGMEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGG 353
Query: 164 DMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWN 215
+AR LFD+M NR DV S+NTLL+ G + ++ +MP + NV S++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I G+A+ GRF +AL F +M +++ + +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEM-----------------------------RYLGIALDR 444
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTAD 331
+ Y N L+ +Y K G E A+D+ + ++D++++N ++ G G +
Sbjct: 445 VSY-------NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
+F +MK P+ +T+ ++ + GL ++ F+ + + Y +
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALI 556
Query: 392 DLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGA 425
D L + GL+ AVS + +M E P+ V + S++ A
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 171/421 (40%), Gaps = 54/421 (12%)
Query: 3 HARKVFDKMPE----PNTATWNAMFN--GYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
A VF+ M E PN T+NA+ + G E + V F EM R P + T
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME-FKQVAKFFDEMQRNGVQP-DRITFN 343
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++ CS+ G + R + + F L++ G + A+++ +MP +
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSA 168
NVV ++ +I + G L L D V ++ ++S Y + G A
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 169 RELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
++ +M + +DV+++N LL GY G +KVF EM N+ +++ LI G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI--GY 278
Y++ G + +A+E F++ G + D L + L+ L +G V + E G
Sbjct: 524 YSKGGLYKEAMEIFREFKSAG--LRADVVLYSALIDALCKNGL-VGSAVSLIDEMTKEGI 580
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNC---------------LDRRDIISWNTMINGL 323
N+ N++ID + + ++ + D N + +I +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTE 640
Query: 324 AMHGNTADA----------LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
+ + T D L +F +M +P+ VTF IL+AC+ D + +
Sbjct: 641 SNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Query: 374 M 374
+
Sbjct: 701 L 701
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-- 309
A++ R G + + K + A + GY ++ +ALI Y + G+ E A+ VFN +
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 310 --RRDIISWNTMINGLAMHG-NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
R +++++N +I+ G FD+M+ + QPD +TF +L+ C+ GL
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLL 423
F M + I + Y + D + + G +D A + +MP++ P+ V +++++
Sbjct: 358 ARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 424 GACRTHKNVEIAELAFQHLIELE-PKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
+ A F + L + ++ L +IY +GR ++ + M G +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 483 K 483
K
Sbjct: 477 K 477
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 208/508 (40%), Gaps = 79/508 (15%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
V D P PN T+ + NG+ LF M + P + ++ KAG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP-DLIAYSTLIDGYFKAG 335
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM----PERNVVVWT 122
+ G ++ A +G K + + ++ I++Y G + A V+ M NVV +T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 123 AMISAYISCGDV----GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
+I G + G ++L E +V +S +I G+ + G++ S L++ M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 179 ----DVMSWNTLLNGYANSG---DVGSFE-KVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
DV+ + L++G + G F K+ + NV +N LI G+ R RF +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK----------- 279
L+ F+ M + G + P+ T V+ R+ ++ H+ +IG +
Sbjct: 516 LKVFRLMGIYG-IKPDVATFTTVM----RVSIMEDAFCKHM-KPTIGLQLFDLMQRNKIS 569
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMING------------- 322
++ V N +I + KC IE A FN L DI+++NTMI G
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 323 ----------------------LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
L + + A+ +F M +P+ VT+ ++ +
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK---MPMEPDAV 417
+ F F+ M + I P I Y + D L + G +D+A + + + PD V
Sbjct: 690 SVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 418 IWTSLL-GACRTHKNVEIAELAFQHLIE 444
+ L+ G C+ + VE A L ++H++
Sbjct: 749 AYAILIRGYCKVGRLVE-AALLYEHMLR 775
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 180 VMSWNTLLNGYA-NSGDVGS--FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
++S N +L G + + +V S V + P NV ++ LI G+ + G A + FK
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G + P+ ++ + G L MG + A G K ++ V ++ ID+Y K G
Sbjct: 312 MEQRG-IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+ +A V+ + + +++++ +I GL G +A ++ Q+ +P VT+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM-- 410
++ G +R GF ++ M+ P + YG + D L + GL+ A+ F KM
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 411 -PMEPDAVIWTSLL-GACRTHK 430
+ + V++ SL+ G CR ++
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNR 511
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 158/374 (42%), Gaps = 32/374 (8%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G ++ + EP+ T++++ +G+ + R L+ +M + P + ++V
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP-DVVIYGVLVDG 470
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF------GEMPE 115
SK G + + + + N + +LI+ + +A KVF G P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 116 ----RNVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVS 167
V+ + M A+ G +L DL D+ + ++VI + +
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 168 ARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIG 219
A + F+ + D++++NT++ GY + + E++FE + N + +LI
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE--SIG 277
+N A+ F M +G PN T ++ S+ ++D+ ++ E G
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSK-PNAVTYGCLMDWFSK--SVDIEGSFKLFEEMQEKG 707
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFN-CLDRR---DIISWNTMINGLAMHGNTADAL 333
++ + +ID K G ++ A ++F+ +D + D++++ +I G G +A
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 334 SLFDQMKNSREQPD 347
L++ M + +PD
Sbjct: 768 LLYEHMLRNGVKPD 781
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 186/432 (43%), Gaps = 65/432 (15%)
Query: 17 ATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHC 76
A ++ M +GY++ + +V+F + FT +V C
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECG------FTPTVVTYGC-------------- 489
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCG 132
LI +Y+ G + A +V M E N+ ++ MI+ ++
Sbjct: 490 ----------------LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 133 DVGSGRRLL-DLAPE---RDVVMWSIVISGYIESGDMVSARELFDKMPN----RDVMSWN 184
D + + D+ E DV++++ +IS + G+M A + +M ++
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 185 TLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+++GYA SGD+ +VF+ M V+++N LI G + A+E +M +
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA--ESIGYKGNMFVGNALIDMYAKCGVI 298
G V N+ T ++ + +G D GK + ++ G ++F AL+ K G +
Sbjct: 654 G-VSANEHTYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 299 ESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
+SA+ V + R+I +N +I+G A G+ +A L QMK +PD T+
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF---VRKMP 411
+SAC+ G + + M + + P I+ Y + RA L ++A+S ++ M
Sbjct: 771 ISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Query: 412 MEPDAVIWTSLL 423
++PD ++ LL
Sbjct: 830 IKPDKAVYHCLL 841
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P T T+ + +GY+ + R + +F M R P H T ++ + + + +
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH-TFNGLINGLVEKRQMEKAVE 645
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYI 129
+ G N T +++ Y++ G G A++ F + ++ + A++ A
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 130 SCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNR----DVM 181
G + S + R++ +++I+I G+ GD+ A +L +M D+
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
++ + ++ + +GD+ + EEM + N+ ++ LI G+AR AL +++M
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Query: 238 LVEG 241
G
Sbjct: 826 KAMG 829
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 213/514 (41%), Gaps = 75/514 (14%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
M A ++FD+M P+ T+N + +GY + + M P + T
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP-SLITFN 288
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
+++ KAG V + E V GF ++F + L + YS+ A V+ +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 117 ----NVVVWTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMV 166
N + +++A G + +L L P V+++ +I GY GD+V
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE--VIYNTMIDGYCRKGDLV 406
Query: 167 SARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLI 218
AR + M + D +++N L+ + G++ + EK +M + +V ++N+LI
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDF---TLVAVLLACSRL--------------- 260
GGY R F + K+M G +PN TL+ L S+L
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNG-TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 261 ------------GALDMGKWVHVYAESI-----GYKGNMFVGNALIDMYAKCGVIESAVD 303
G GK + S G + N+ N LID + G + A D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 304 VFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
+ + R+ D+ ++N++I+G GN ++L+++MK S +P T+ ++S CT
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP---DA 416
++G + + S+ P + Y + G +++A + ++M + D
Sbjct: 646 -----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 417 VIWTSL-LGACRTHKNVEIAELAFQ-HLIELEPK 448
+ SL LG + K E+ L + + E+EP+
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 147/334 (44%), Gaps = 22/334 (6%)
Query: 120 VWTAMISAYISCGDVGSGRRLLD-LAPER---DVVMWSIVISGYIESGDMVSARELFDKM 175
++ I A + DVG G L + + +R V +++++I G + M A +LFD+M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 176 PNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRF 227
R ++++NTL++GY +G+ KV E M E ++ ++N L+ G + G
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
DA K+M G VP+ FT + S + V+ A G K N + +
Sbjct: 301 EDAENVLKEMKDLG-FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIIS----WNTMINGLAMHGNTADALSLFDQMKNSR 343
L++ K G IE A ++ + ++ +NTMI+G G+ A + M+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+PD + + ++ +G + + M + P +E Y + GR D+
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 404 VSFVRKMP---MEPDAVIWTSLLGA-CRTHKNVE 433
+++M P+ V + +L+ C+ K +E
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 162/382 (42%), Gaps = 28/382 (7%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
PN +N M +GY + M + P +H ++R + G + E+
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP-DHLAYNCLIRRFCELGEMENAEK 445
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
+G + LI Y K + + EM + + I+C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 134 VGSG--------RRLLDLAPERDVVMWSIVISGYIESGDMVSA----RELFDKMPNRDVM 181
GS R + D V +++++I G G + A +E+ K +++
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQM 237
++NTL++G + +G + E + E+ + +V+++N LI GY G + +++M
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
G + P T ++ C++ G +++ + ++ E + K ++ V N ++ YA G
Sbjct: 626 KRSG-IKPTLKTYHLLISLCTKEG-IELTE--RLFGE-MSLKPDLLVYNGVLHCYAVHGD 680
Query: 298 IESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFV 352
+E A ++ + + I ++N++I G G + SL D+M N+RE +P+ T+
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAREMEPEADTYN 739
Query: 353 GILSACTHMGLVRDGFLYFQSM 374
I+ + +++++ M
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREM 761
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
++++ K E N T+N + +G S+T + L E++R P + FT ++
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP-DVFTYNSLISGYG 610
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVVVWT 122
AG V+ ++ + G K LI + + +G + ++FGEM + +++V+
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYN 669
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
++ Y GD+ +++++ + D ++ +I G ++ G + R L D+M R
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 179 DVM----SWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDA 230
++ ++N ++ G+ D S + EM E+ +V N L+ G R +A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 185/445 (41%), Gaps = 57/445 (12%)
Query: 4 ARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A + D+M E P+T T+ + +G L + V L M + P N T +VV
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGVVV 232
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
K G + + + + +I+ V DA +F EM +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 117 -NVVVWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSAREL 171
NVV ++++IS S G +LL E+ + V ++ +I +++ G V A +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 172 FDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY----SWNVLIGGYAR 223
+D M R D+ ++N+L+NG+ + +++FE M ++ + ++N LI G+ +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
+ R D E F++M G +V + T ++ G D + V S G
Sbjct: 413 SKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP--- 468
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
DI++++ +++GL +G AL +FD M+ S
Sbjct: 469 ----------------------------DIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+ D + ++ G V DG+ F S+ + P + Y M L LL +A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 404 VSFVRKMPME---PDAVIWTSLLGA 425
+ ++KM + P++ + +L+ A
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 164/384 (42%), Gaps = 35/384 (9%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISAYISCGDVGSGRRLLDLAPER- 147
LI + + + A + G+M E ++V +++++ Y + L+D E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 148 ---DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFE 200
D + ++ +I G A L D+M R +++++ ++NG GD
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 201 KVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+ +M E +V +N +I + DAL FK+M +G + PN T + L++
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVT-YSSLIS 303
Query: 257 CSRLGALDMGKWV---HVYAESIGYK--GNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
C G+W + ++ I K N+ NALID + K G A +++ + +R
Sbjct: 304 C----LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 312 ----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
DI ++N+++NG MH A +F+ M + PD VT+ ++ V DG
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSLLG 424
F+ M H ++ Y + L G D A ++M + PD + ++ LL
Sbjct: 420 TELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 425 ACRTHKNVEIAELAFQHLIELEPK 448
+ +E A F ++ + E K
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIK 502
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 119/283 (42%), Gaps = 33/283 (11%)
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
++N L+N + + + +M E ++ + + L+ GY R SDA+ QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI----------GYKGNMFVGNA 287
VE P+ T ++ G ++H A G + N+
Sbjct: 182 -VEMGYRPDTITFTTLI----------HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 288 LIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+++ K G + A+++ N ++ D++ +NT+I+ L + + DAL+LF +M+
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+P+ VT+ ++S G D M++ I P + + + D + G +A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEA 349
Query: 404 VSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
M ++PD + SL+ H ++ A+ F+ ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 210/496 (42%), Gaps = 35/496 (7%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
N N + G V L EM R + P + F+ V+R + + + ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP-DVFSYNTVIRGFCEGKELEKALEL 199
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISAYIS 130
G W+ LI+ + G + +A EM E ++VV+T++I +
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 131 CGDVGSGRRLLDLAPERD----VVMWSIVISGYIESGDMVSARELFDKMPNR----DVMS 182
CG++ G+ L D ER + ++ +I G+ + G + A E+F+ M R +V +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQML 238
+ L++G G ++ M E+ N ++N++I ++G +DA+E +++
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELM 378
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALD-MGKWVHVYAESIGYKG-NMFVGNALIDMYAKCG 296
+ P++ T +L G LD K +++ + Y ++ NALI K
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+ A+D+++ L + D ++ N ++N G+ A+ L+ Q+ +S+ + T+
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 353 GILSACTHMGL--VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
++ G+ V G L + + + P + Y C+ L + G LDQA +M
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSE---LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 411 PME---PDAVIWTSLLGACRTHKNVEIAE--LAFQHLIELEPKNPANFVMLSNIYKDLGR 465
+ PD V + ++ +++ AE L L P + + L N + LG
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP-DLFTYSKLINRFLKLGY 614
Query: 466 WQDVARLKIAMRDTGF 481
+ M D+GF
Sbjct: 615 LDEAISFFDKMVDSGF 630
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 167/388 (43%), Gaps = 28/388 (7%)
Query: 1 MGHARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ + +FD++ E P T+N + G+ ++ +F M P N +T
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP-NVYTYT 321
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++ G +E Q+ + ++ + N+ +I G V DA ++ M +R
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 117 NV----VVWTAMISAYISCGDVGSGRRLLDLA------PERDVVMWSIVISGYIESGDMV 166
+ + ++ + GD+ +LL L + DV+ ++ +I G + +
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 167 SARELFD----KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLI 218
A +++D K+ D ++ N LLN +GDV ++++++ + RN ++ +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ + G + A +M V ++ P+ F +L + + G+LD + +
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRV-SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALS 334
++ N +ID K G I+SA + + R D+ +++ +IN G +A+S
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMG 362
FD+M +S +PD +L C G
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQG 648
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 177/409 (43%), Gaps = 57/409 (13%)
Query: 4 ARKVFDKM----PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A V+D+M P+ T + + N Y + + +V E + LN T ++
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ G V +V + ++RG N T+LI+ Y KG + +A VF + E+ +V
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 120 ----VWTAMISAYISCGDVGSGRR----LLDLAPERDVVMWSIVISGYIESGDMVSAREL 171
++ ++ Y G + R ++++ + + + +I+GY +SG +V A ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 172 FDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYAR 223
F +M + D ++NTL++GY +G V K+ ++M ++ V ++N+L+ GY+R
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD--MGKWVHVYAESIGYKGN 281
G F D L +K ML G V ++ + +L A +LG + M W +V A +
Sbjct: 449 IGAFHDVLSLWKMMLKRG-VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL----- 502
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
D I+ N MI+GL +A + D +
Sbjct: 503 ----------------------------LTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
R +P T+ + +G +++ F + M + I P IE Y +
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM-ERKGIFPTIEMYNTL 582
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 57/326 (17%)
Query: 81 RGFKWNSFLCTA---LIEMYSAKGSVGDAYKVF------GEMPE---------------R 116
R FK SF T ++++Y+ KG V +A VF G +P
Sbjct: 146 RVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 117 NVV---VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD----MVSAR 169
N V V+ MIS +++P DV SIV++ Y SG+ MV A+
Sbjct: 206 NFVALHVYDQMIS--------------FEVSP--DVFTCSIVVNAYCRSGNVDKAMVFAK 249
Query: 170 ELFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE----RNVYSWNVLIGGYARN 224
E + +V+++N+L+NGYA GDV +V M E RNV ++ LI GY +
Sbjct: 250 ETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK 309
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G +A F ++L E +V + ++ R G + VH IG + N +
Sbjct: 310 GLMEEAEHVF-ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 285 GNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMK 340
N+LI+ Y K G + A +F+ ++ + D ++NT+++G G +AL L DQM
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 341 NSREQPDGVTFVGILSACTHMGLVRD 366
P +T+ +L + +G D
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHD 454
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 147/357 (41%), Gaps = 45/357 (12%)
Query: 1 MGHARKVFDKMP----EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
+ A+++ D + +P T+ A+ +GY + ++ + M R P T+
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP----TIE 577
Query: 57 IVVRSCSKAGAVREGEQVHCVAAK---RGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
+ S A R +V + + RG ALI + G + AY EM
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPE-----RDVVMWSIVISGYIESGDMVSA 168
E+ + + + C + + LD E + +V + +++ GY + + A
Sbjct: 638 IEKGITLNVNI------CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 169 RELFDKMPNRDVMSWNTLL--NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
S T L A S + + +K+ +P VY NV I G + G+
Sbjct: 692 -------------SATTCLKTQKIAESVENSTPKKLL--VPNNIVY--NVAIAGLCKAGK 734
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
DA + F +L +P+++T ++ C+ G ++ + G N+ N
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQM 339
ALI K G ++ A + + L ++ I I++NT+I+GL GN A+A+ L ++M
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 179/471 (38%), Gaps = 66/471 (14%)
Query: 3 HARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
A ++F +M + P+ T+N + +GY + + L +M + P T I+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP-TVMTYNIL 442
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-- 116
++ S+ GA + + + KRG + C+ L+E G +A K++ + R
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 117 --NVVVWTAMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARE 170
+ + MIS V + +LD + V + + GY + G++ A
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Query: 171 LFDKMPNRDVMS----WNTLLNG-------------------------YANSG------- 194
+ + M + + +NTL++G A G
Sbjct: 563 VKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC 622
Query: 195 DVGSFEKVFE---EMPERNVYSWNVLIGGYARNGRFS----DALEAFKQMLVEGDVVPND 247
++G +K + EM E+ + + NV I N F D Q +V+ D++
Sbjct: 623 NIGMIDKAYATCFEMIEKGI-TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPG 681
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYK---GNMFVGNALIDMYAKCGVIESAVDV 304
+ + L S L K S K N V N I K G +E A +
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 305 FNCL---DR--RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
F+ L DR D ++ +I+G A+ G+ A +L D+M P+ VT+ ++
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+G V D + I P Y + D L ++G + +A+ KM
Sbjct: 802 KLGNV-DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 149/373 (39%), Gaps = 59/373 (15%)
Query: 72 EQVHCVAAKRGFKWN-SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
+ VH ++ R ++ S+LC + +S G+ +VF E + V+ ++ Y
Sbjct: 109 KMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFS-FSPTVFDMILKVYAE 167
Query: 131 CGDVGSGRRLLDLAPERDVV----MWSIVISGYIESGDMVSARELFDKM----PNRDVMS 182
G V + + D + + ++S + G+ A ++D+M + DV +
Sbjct: 168 KGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFT 227
Query: 183 WNTLLNGYANSGDVGS---FEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
+ ++N Y SG+V F K E E NV ++N LI GYA G
Sbjct: 228 CSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD----------- 276
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
VEG M + + + +E G N+ +LI Y K G+
Sbjct: 277 -VEG-----------------------MTRVLRLMSER-GVSRNVVTYTSLIKGYCKKGL 311
Query: 298 IESAVDVFNCLDRRDIIS----WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+E A VF L + +++ + +++G G DA+ + D M + +
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+++ G + + F M D +S+ P Y + D RAG +D+A+ +M +
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMND-WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430
Query: 414 ---PDAVIWTSLL 423
P + + LL
Sbjct: 431 EVVPTVMTYNILL 443
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 202/474 (42%), Gaps = 42/474 (8%)
Query: 3 HARKVFDKMPE-----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
A VF +M E P ++N + N + + V LFA A AP N T +
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAP-NLQTYNV 154
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
+++ K + K GFK + F + +I + G + DA ++F EM ER
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 117 ---NVVVWTAMISAYISCGDVGSGRRLLDLAPER-----DVVMWSIVISGYIESGDMVSA 168
+V + +I ++ D + L D E +V +I+ISG + G +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 169 RELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGG 220
+++++M +D+ ++++L++G ++G+V E VF E+ ER +V ++N ++GG
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
+ R G+ ++LE ++ M + V N + ++ G +D + + GY
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLF 336
+ I G + A+ V ++ D+ ++ ++I+ L +A +L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFL----YFQSMVDHYSIIPQIEHYGCMAD 392
+M GV + GL+RD L +F + P + Y +
Sbjct: 453 KEM-----SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 393 LLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLL-GACRTHKNVEIAELAFQHL 442
L +AG +A +FV++M +PD ++ LL G CR K EL Q L
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 37/250 (14%)
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV----- 271
+I Y +N AL+ FK+M P + +L A ++ +WV V
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA-----FVEAKQWVKVESLFA 138
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHG 327
Y E+ G N+ N LI M K E A + + + D+ S++T+IN LA G
Sbjct: 139 YFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAG 198
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL----------YFQSMVDH 377
DAL LFD+M PD VT IL DGFL + +++
Sbjct: 199 KLDDALELFDEMSERGVAPD-VTCYNILI---------DGFLKEKDHKTAMELWDRLLED 248
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM---EPDAVIWTSLLGACRTHKNVEI 434
S+ P ++ + M L + G +D + +M E D ++SL+ NV+
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 435 AELAFQHLIE 444
AE F L E
Sbjct: 309 AESVFNELDE 318
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 148/364 (40%), Gaps = 31/364 (8%)
Query: 4 ARKVFDKMPEPNTA----TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A VF+++ E + T+N M G+ ++ + L+ M + +N + I++
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS--VNIVSYNILI 366
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
+ + G + E + + +G+ + I G V A V E+
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 117 -NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIV----ISGYIESGDMVSA--- 168
+V + ++I + L+ + V + S V I G I + A
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 169 -RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYAR 223
RE+ V+S+N L+ G +G G +EM E ++ ++++L+ G R
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL--ACSRLGALDMGKWVHVYAESIGYKGN 281
+ + ALE + Q L G + D + +L+ CS +G LD V E N
Sbjct: 547 DRKIDLALELWHQFLQSG--LETDVMMHNILIHGLCS-VGKLDDAMTVMANMEHRNCTAN 603
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFD 337
+ N L++ + K G A ++ + + DIIS+NT++ GL M + A+ FD
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 338 QMKN 341
+N
Sbjct: 664 DARN 667
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 158/364 (43%), Gaps = 18/364 (4%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
+ T+ + NG + + L ++M P I+ R C K G + + +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYL 318
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYIS 130
++G N F +I+ + + G DA ++ +M ER +V+ + A+ISA +
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 131 CGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
G + +L D R D V ++ +I G+ + A+ +FD M + DV+++NT+
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 187 LNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
++ Y + V ++ E+ R N ++N LI G+ + A + F++M+ G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG- 497
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V P+ T +L L+ + + + N +I K ++ A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 303 DVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
D+F L D+ ++N MI+G +DA LF +MK++ +PD T+ ++ C
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 359 THMG 362
G
Sbjct: 618 LKAG 621
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 183/427 (42%), Gaps = 23/427 (5%)
Query: 4 ARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A +FD+M E P T+N + NG L + L +M ++ T +V
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVTYGTIV 268
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
K G + + + K + + +A+I+ G DA +F EM E+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 117 -NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSAREL 171
NV + MI + S G +RLL ER DV+ ++ +IS ++ G + A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 172 FDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
D+M +R D +++N+++ G+ + +F+ M +V ++N +I Y R R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+ ++ +++ G +V N T ++ + L+ + + S G + N
Sbjct: 449 DEGMQLLREISRRG-LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
L+ + + +E A+++F + D +++N +I+G+ +A LF +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+PD T+ ++S + D + F M D+ P Y + +AG +D++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 404 VSFVRKM 410
+ + +M
Sbjct: 627 IELISEM 633
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 29/269 (10%)
Query: 168 ARELFDKMPNR----DVMSWNTLLNGYAN----SGDVGSFEKVFEEMPERNVYSWNVLIG 219
A L+ KM R ++ S+N L+ + + S + +F K+ + + +V ++N L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
G R S+AL F M+ G + VA+ +G + + + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFL-----EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
G + AL++ G+ D++++ T++NG+ G+T AL+L +M
Sbjct: 240 GRVLEAAALVNKMVGKGL------------HIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
+ + +PD V + I+ G D F M++ I P + Y CM D G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGR 346
Query: 400 LDQAVSFVRKM---PMEPDAVIWTSLLGA 425
A +R M + PD + + +L+ A
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISA 375
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 202/447 (45%), Gaps = 29/447 (6%)
Query: 3 HARKVFDKMPE---PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A KVF++M + PN +T+N + + L M +A P N T+ I+V
Sbjct: 361 EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP-NVRTVNIMV 419
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
K+ + E + + + +LI+ G V DAYKV+ +M +
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 117 -NVVVWTAMISAYISCGDVGSGRR----LLDLAPERDVVMWSIVISGYIESGDMVSAREL 171
N +V+T++I + + G G + +++ D+ + + + ++G+ R +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 172 FDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYAR 223
F+++ R D S++ L++G +G ++F M E+ + ++N++I G+ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G+ + A + ++M +G P T +V+ +++ LD + A+S + N+
Sbjct: 600 CGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQM 339
+ ++LID + K G I+ A + L ++ ++ +WN++++ L +AL F M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
K + P+ VT+ +++ + F+++Q M + P Y M L +AG
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGN 777
Query: 400 LDQAVSFVRKMPME---PDAVIWTSLL 423
+ +A + + PD+ + +++
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 169/417 (40%), Gaps = 63/417 (15%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
PN T N M + ++ + +F EM+ P + T ++ K G V + +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP-DEITFCSLIDGLGKVGRVDDAYK 468
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC-- 131
V+ + NS + T+LI+ + G D +K++ +M +N +++ Y+ C
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 132 --GDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVM 181
G+ GR + + R D +SI+I G I++G ELF M + D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDA---LEAF 234
++N +++G+ G V ++ EEM E V ++ +I G A+ R +A E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K +E +VV +++ ++G +D + G N++ N+L+D K
Sbjct: 649 KSKRIELNVV----IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 295 CGVIESAVDVFN---------------------CLDRR------------------DIIS 315
I A+ F C R+ IS
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+ TMI+GLA GN A+A +LFD+ K + PD + ++ ++ D F F+
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 31/363 (8%)
Query: 38 LFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC--TALIE 95
+ EM+ A P + + +V+ C KA +REG V V R FK+ T LI
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVL-GCVKANKLREGYDV--VQMMRKFKFRPAFSAYTTLIG 176
Query: 96 MYSAKGSVGDAYKVFGEMPE----RNVVVWTAMISAYISCGDVGSGRRLLD----LAPER 147
+SA +F +M E V ++T +I + G V S LLD + +
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVF 203
D+V++++ I + + G + A + F ++ D +++ +++ + + ++F
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 204 EEMPERN-----VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
E + E+N Y++N +I GY G+F +A ++ +G + P+ +L
Sbjct: 297 EHL-EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLR 354
Query: 259 RLGALDMGKWVHVYAE-SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DI 313
++G +D + + V+ E N+ N LIDM + G +++A ++ + + + ++
Sbjct: 355 KMGKVD--EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
+ N M++ L +A ++F++M PD +TF ++ +G V D + ++
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472
Query: 374 MVD 376
M+D
Sbjct: 473 MLD 475
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 158/364 (43%), Gaps = 18/364 (4%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
+ T+ + NG + + L ++M P I+ R C K G + + +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYL 318
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYIS 130
++G N F +I+ + + G DA ++ +M ER +V+ + A+ISA +
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 131 CGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTL 186
G + +L D R D V ++ +I G+ + A+ +FD M + DV+++NT+
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 187 LNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
++ Y + V ++ E+ R N ++N LI G+ + A + F++M+ G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG- 497
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V P+ T +L L+ + + + N +I K ++ A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 303 DVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
D+F L D+ ++N MI+G +DA LF +MK++ +PD T+ ++ C
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 359 THMG 362
G
Sbjct: 618 LKAG 621
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 183/427 (42%), Gaps = 23/427 (5%)
Query: 4 ARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A +FD+M E P T+N + NG L + L +M ++ T +V
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVTYGTIV 268
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--- 116
K G + + + K + + +A+I+ G DA +F EM E+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 117 -NVVVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSAREL 171
NV + MI + S G +RLL ER DV+ ++ +IS ++ G + A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 172 FDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
D+M +R D +++N+++ G+ + +F+ M +V ++N +I Y R R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+ ++ +++ G +V N T ++ + L+ + + S G + N
Sbjct: 449 DEGMQLLREISRRG-LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 288 LIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
L+ + + +E A+++F + D +++N +I+G+ +A LF +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+PD T+ ++S + D + F M D+ P Y + +AG +D++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 404 VSFVRKM 410
+ + +M
Sbjct: 627 IELISEM 633
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 29/269 (10%)
Query: 168 ARELFDKMPNR----DVMSWNTLLNGYAN----SGDVGSFEKVFEEMPERNVYSWNVLIG 219
A L+ KM R ++ S+N L+ + + S + +F K+ + + +V ++N L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
G R S+AL F M+ G + VA+ +G + + + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFL-----EAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
G + AL++ G+ D++++ T++NG+ G+T AL+L +M
Sbjct: 240 GRVLEAAALVNKMVGKGL------------HIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
+ + +PD V + I+ G D F M++ I P + Y CM D G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGR 346
Query: 400 LDQAVSFVRKM---PMEPDAVIWTSLLGA 425
A +R M + PD + + +L+ A
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISA 375
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 215/526 (40%), Gaps = 73/526 (13%)
Query: 19 WNAMFNG---YSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVH 75
+N + N + L + + V + EM P N +T +V K G V E Q
Sbjct: 186 YNTLLNSLARFGLVDEMKQV---YMEMLEDKVCP-NIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 76 CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNVVVWTAMISA---- 127
+ G + F T+LI Y + + A+KVF EMP RN V +T +I
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 128 ---------YISCGD-----------------VGSGRR--LLDLAPERD-------VVMW 152
++ D GS R+ L+L E + + +
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 153 SIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
+++I AREL +M + +V+++N L+NGY G + V E M
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 209 R----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
R N ++N LI GY ++ A+ +ML E V+P+ T +++ R G D
Sbjct: 422 RKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMI 320
+ G + + ++ID K +E A D+F+ L+++ +++ + +I
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+G G +A + ++M + P+ +TF ++ G +++ L + MV +
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-KIGL 598
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGA-CRTHKNVEIAE 436
P + + L + G D A S ++M +PDA +T+ + CR + ++ +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 437 LAFQHLIELEPKNPANFVMLSNI--YKDLGRWQDVARLKIAMRDTG 480
+ + + +P F S I Y DLG+ + MRDTG
Sbjct: 659 MMAK--MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 207/517 (40%), Gaps = 69/517 (13%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+PN T+ + + L +M P N T ++ K G + +
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAV 413
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
V + R N+ LI+ Y K +V A V +M ER +VV + ++I
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 129 ISCGDVGSGRRLLDLAPERDVV----MWSIVISGYIESGDMVSARELFDKMP----NRDV 180
G+ S RLL L +R +V ++ +I +S + A +LFD + N +V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVY----SWNVLIGGYARNGRFSDALEAFKQ 236
+ + L++GY +G V + E+M +N ++N LI G +G+ +A ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 237 MLVEG--DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE-----SIGYKGNMFVGNALI 289
M+ G V D L+ LL G + H Y+ S G K + I
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLK--------DGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 290 DMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
Y + G + A D+ + D+ +++++I G G T A + +M+++ +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL--DQA 403
P TF+ S++ H + + G +L + ++ D
Sbjct: 705 PSQHTFL--------------------SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 404 VSFVRKM---PMEPDAVIWTSL-LGACRTHKNVEIAELAFQHLIELEPKNPANFV---ML 456
V + KM + P+A + L LG C N+ +AE F H+ E +P+ V +L
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 457 SNIYKDLGRWQDVARLKIAMRDTG-FRKLPGCSVIEC 492
S K L + + A++ M G +L C V+ C
Sbjct: 804 SCCCK-LKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 131/354 (37%), Gaps = 32/354 (9%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
K+ K PN+ T+NA+ +G ++ +L +M + P T I++ K
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS-TDTILIHRLLKD 615
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV----VVW 121
G G K ++ T I+ Y +G + DA + +M E V +
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 122 TAMISAYISCGDVGSG-------RRLLDLAPERDVVMWSIVISGYIES--GDMVSARELF 172
+++I Y GD+G +R+ D E + +I +E G +
Sbjct: 676 SSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
M N +M ++T+ V EK+ E N S+ LI G G A +
Sbjct: 733 CAMSN--MMEFDTV---------VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F M + P++ A+L C +L + V +G+ + LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 293 AKCGVIESAVDVFN----CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
K G E VF C D ++W +I+G+ G LF+ M+ +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 175/434 (40%), Gaps = 74/434 (17%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
+K+ D P+ T N + + Y + + F M A P + T I++ SK
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP-DTTTFNIIIYCLSK 163
Query: 65 AGAVREG-EQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNV 118
G + + + + KR + + T+++ +YS KG + + VF M + N+
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V + A++ AY G G+ +L G I+ ++
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVL----------------GDIKQNGIIP----------- 256
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVF----EEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
DV+S+ LLN Y S G ++VF +E + NV ++N LI Y NG ++A+E F
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+QM +G + PN ++ +L ACSR V A+S G N N+ I Y
Sbjct: 317 RQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
+E A+ +L+ M+ + + D VTF +
Sbjct: 376 AAELEKAI-------------------------------ALYQSMRKKKVKADSVTFTIL 404
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM-- 412
+S M + Y + M D SI E Y + + G + +A S +M M
Sbjct: 405 ISGSCRMSKYPEAISYLKEMED-LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 413 -EPDAVIWTSLLGA 425
EPD + +TS+L A
Sbjct: 464 CEPDVIAYTSMLHA 477
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 46/394 (11%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEM--NRAAAAPLNHFTLPIVVRSCSKAGAVREG 71
P+T T+N + S + LF M RA P + T ++ S G +
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP-DVVTFTSIMHLYSVKGEIENC 207
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISA 127
V G K N AL+ Y+ G G A V G++ + +VV +T ++++
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 267
Query: 128 YISCGDVGSGRRL-LDLAPER---DVVMWSIVISGYIESGDMVSARELFDKM------PN 177
Y G + + L + ER +VV ++ +I Y +G + A E+F +M PN
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEA 233
V+S TLL + S + + V R N ++N IG Y A+
Sbjct: 328 --VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF---------V 284
++ M V D +L++ G+ M K Y E+I Y M V
Sbjct: 386 YQSM--RKKKVKADSVTFTILIS----GSCRMSK----YPEAISYLKEMEDLSIPLTKEV 435
Query: 285 GNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMK 340
++++ Y+K G + A +FN + D+I++ +M++ A LF +M+
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+ +PD + ++ A G + F+ M
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 67/326 (20%)
Query: 168 ARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEM------PERNVYSWNVL 217
AR LF +M D +++ L+N + +G + ++M P R+ Y N L
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY--NNL 87
Query: 218 IGGYARNGRFSDALEAFKQM---------------------------------LVEGDVV 244
I +G + +ALE K+M L++G V
Sbjct: 88 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 147
Query: 245 PNDFTLVAVLLAC-SRLG----ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
D T +++ C S+LG ALD+ + + + + ++ +++ +Y+ G IE
Sbjct: 148 RPDTTTFNIIIYCLSKLGQSSQALDL--FNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 300 SAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
+ VF + + +I+S+N ++ A+HG + ALS+ +K + PD V++ +L
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 356 SA---CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP- 411
++ G ++ FL M+ P + Y + D G G L +AV R+M
Sbjct: 266 NSYGRSRQPGKAKEVFL----MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 412 --MEPDAVIWTSLLGAC-RTHKNVEI 434
++P+ V +LL AC R+ K V +
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNV 347
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 175/434 (40%), Gaps = 74/434 (17%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
+K+ D P+ T N + + Y + + F M A P + T I++ SK
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP-DTTTFNIIIYCLSK 295
Query: 65 AGAVREG-EQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ERNV 118
G + + + + KR + + T+++ +YS KG + + VF M + N+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V + A++ AY G G+ +L G I+ ++
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVL----------------GDIKQNGIIP----------- 388
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVF----EEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
DV+S+ LLN Y S G ++VF +E + NV ++N LI Y NG ++A+E F
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+QM +G + PN ++ +L ACSR V A+S G N N+ I Y
Sbjct: 449 RQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
+E A+ +L+ M+ + + D VTF +
Sbjct: 508 AAELEKAI-------------------------------ALYQSMRKKKVKADSVTFTIL 536
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM-- 412
+S M + Y + M D SI E Y + + G + +A S +M M
Sbjct: 537 ISGSCRMSKYPEAISYLKEMED-LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 413 -EPDAVIWTSLLGA 425
EPD + +TS+L A
Sbjct: 596 CEPDVIAYTSMLHA 609
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 46/394 (11%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEM--NRAAAAPLNHFTLPIVVRSCSKAGAVREG 71
P+T T+N + S + LF M RA P + T ++ S G +
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP-DVVTFTSIMHLYSVKGEIENC 339
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISA 127
V G K N AL+ Y+ G G A V G++ + +VV +T ++++
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 128 YISCGDVGSGRRL-LDLAPER---DVVMWSIVISGYIESGDMVSARELFDKM------PN 177
Y G + + L + ER +VV ++ +I Y +G + A E+F +M PN
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEA 233
V+S TLL + S + + V R N ++N IG Y A+
Sbjct: 460 --VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF---------V 284
++ M V D +L++ G+ M K Y E+I Y M V
Sbjct: 518 YQSM--RKKKVKADSVTFTILIS----GSCRMSK----YPEAISYLKEMEDLSIPLTKEV 567
Query: 285 GNALIDMYAKCGVIESAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMK 340
++++ Y+K G + A +FN + D+I++ +M++ A LF +M+
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+ +PD + ++ A G + F+ M
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 67/326 (20%)
Query: 168 ARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEM------PERNVYSWNVL 217
AR LF +M D +++ L+N + +G + ++M P R+ Y N L
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY--NNL 219
Query: 218 IGGYARNGRFSDALEAFKQM---------------------------------LVEGDVV 244
I +G + +ALE K+M L++G V
Sbjct: 220 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 279
Query: 245 PNDFTLVAVLLAC-SRLG----ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
D T +++ C S+LG ALD+ + + + + ++ +++ +Y+ G IE
Sbjct: 280 RPDTTTFNIIIYCLSKLGQSSQALDL--FNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 300 SAVDVFNCLD----RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
+ VF + + +I+S+N ++ A+HG + ALS+ +K + PD V++ +L
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 356 SA---CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP- 411
++ G ++ FL M+ P + Y + D G G L +AV R+M
Sbjct: 398 NSYGRSRQPGKAKEVFL----MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 412 --MEPDAVIWTSLLGAC-RTHKNVEI 434
++P+ V +LL AC R+ K V +
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNV 479
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 181/432 (41%), Gaps = 53/432 (12%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P+T T+ + +G + V L M P + T V+ K G
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP-DLVTYGAVINGLCKRGEPDLAL 225
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ K + + + + +I+ V DA +F EM + +V ++++IS
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 129 ISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+ G RLL ER +VV ++ +I + + G ++ A +LFD+M R ++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERN----VYSWNVLIGGYARNGRFSDALEAFKQ 236
+++N+L+NG+ + +++F M ++ V ++N LI G+ + + D +E F+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G +V N T ++ + D + V S G N
Sbjct: 406 MSRRG-LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN--------------- 449
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
I+++NT+++GL +G A+ +F+ ++ S+ +PD T+ +
Sbjct: 450 ----------------IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME--- 413
G V DG+ F S+ + P + Y M + GL ++A + KM +
Sbjct: 494 GMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 414 PDAVIWTSLLGA 425
PD+ + +L+ A
Sbjct: 553 PDSGTYNTLIRA 564
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 149/377 (39%), Gaps = 81/377 (21%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+ ++ PN T+N++ + ++ + LF EM + + P N T ++
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-NIVTYNSLINGFCMHD 359
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ E +Q+ + + + LI + V D ++F +M R +V T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT---- 415
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDV 180
V ++ +I G+ ++ D +A+ +F +M PN +
Sbjct: 416 -----------------------VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN--I 450
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
M++NTLL+G +G + VFE + E ++Y++N++ G + G+ D + F
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+ ++G V + I Y N +I + K G
Sbjct: 511 LSLKG-----------------------------VKPDVIAY-------NTMISGFCKKG 534
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+ E A +F + D ++NT+I G+ A + L +M++ R D T+
Sbjct: 535 LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY- 593
Query: 353 GILSACTHMGLVRDGFL 369
G+++ H G + GFL
Sbjct: 594 GLVTDMLHDGRLDKGFL 610
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 154/358 (43%), Gaps = 52/358 (14%)
Query: 105 DAYKVFGEM----PERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVI 156
+A +FGEM P ++V ++ ++SA + G ++ L ++ ++I+I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 157 SGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER--- 209
+ + A + KM +++ N+LLNG+ + + + ++M E
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 210 -NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+ ++ L+ G ++ + S+A+ ++M+V+G P+ T AV+ + G D+
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLAL- 225
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
N L M G IE+ D++ ++T+I+ L + +
Sbjct: 226 -----------------NLLNKMEK--GKIEA-----------DVVIYSTVIDSLCKYRH 255
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
DAL+LF +M N +PD T+ ++S + G D M++ I P + +
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFN 314
Query: 389 CMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+ D + G L +A +M ++P+ V + SL+ H ++ A+ F ++
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 3 HARKVFDKMPE----PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
A K+FD+M + PN T+N++ NG+ + + + +F M P + T +
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-DVVTYNTL 386
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-- 116
+ KA V +G ++ ++RG N+ T LI + +A VF +M
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 117 --NVVVWTAMISAYISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARE 170
N++ + ++ G + + + E D+ ++I+ G ++G + +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 171 LFDKMPNR----DVMSWNTLLNGYANSG----DVGSFEKVFEEMPERNVYSWNVLIGGYA 222
LF + + DV+++NT+++G+ G F K+ E+ P + ++N LI +
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 223 RNGRFSDALEAFKQM 237
R+G + + E K+M
Sbjct: 567 RDGDKAASAELIKEM 581
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 167/410 (40%), Gaps = 63/410 (15%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+T+T++ + N +LF EM R + +T I+V S KAG + +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQAR- 538
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE----RNVVVWTAMISAYI 129
KW F EM E NVV +TA+I AY+
Sbjct: 539 ----------KW------------------------FNEMREVGCTPNVVTYTALIHAYL 564
Query: 130 SCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNT 185
V L + ++V +S +I G+ ++G + A ++F++M
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC--------- 615
Query: 186 LLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
G + DV + K +++ ER NV ++ L+ G+ ++ R +A + M +EG
Sbjct: 616 ---GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CE 671
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN A++ ++G LD + V G+ ++ ++LID Y K + A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 305 FNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
+ + +++ + MI+GL G T +A L M+ QP+ VT+ ++
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+G + + M + P Y + D + G LD A + + +M
Sbjct: 792 IGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 22/355 (6%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
EP+ T+ ++ NG+ + D + +F +M P N ++ K+ V
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP-NVVIYNTIIDGLCKSKQVDNAL 206
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY 128
+ K G + +LI + G DA ++ M +R +V + A+I A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 129 ISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+ G V + R D+V +S++I G + A E+F M ++ DV
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQ 236
++++ L+NGY S V K+F EM +R N ++ +LI GY R G+ + A E F++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+ G V PN T +L G ++ + + G ++ N +I K G
Sbjct: 387 MVFCG-VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 297 VIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+ A D++ L+ + DI ++ TM+ GL G +A +LF +MK P+
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
N+ + N+L+ + R + S AL +M+ G P+ T ++L R + ++
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE-PSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAM 325
+GYK N+ + N +ID K +++A+D+ N +++ D++++N++I+GL
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
G +DA + M PD TF ++ AC G V + +++ M+ S+ P I
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIV 292
Query: 386 HYGCMADLLGRAGLLDQA---VSFVRKMPMEPDAVIWTSLL-GACRTHK 430
Y + L LD+A F+ PD V ++ L+ G C++ K
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 145/335 (43%), Gaps = 30/335 (8%)
Query: 117 NVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
N+ +++ + C + +++ L E +V + +++G+ + A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 173 DKM------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYA 222
D+M PN V+ +NT+++G S V + + M + +V ++N LI G
Sbjct: 175 DQMVGMGYKPN--VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
+GR+SDA M + ++ P+ FT A++ AC + G + + Y E I +
Sbjct: 233 SSGRWSDATRMVSCM-TKREIYPDVFTFNALIDACVKEGRVSEAE--EFYEEMIRRSLDP 289
Query: 283 FVGNALIDMYAKC--GVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALSLF 336
+ + +Y C ++ A ++F + + D+++++ +ING + LF
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+M + VT+ ++ G + F+ MV + P I Y + L
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV-FCGVHPNIITYNVLLHGLCD 408
Query: 397 AGLLDQAVSFVRKMP---MEPDAVIWTSLL-GACR 427
G +++A+ + M M+ D V + ++ G C+
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 223 RNG----RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
RNG + D+L+ F M V+ +P+ +L A S++ D+ ++ + +G
Sbjct: 54 RNGIRFMKLDDSLDLFFHM-VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI 112
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR----DIISWNTMINGLAMHGNTADALS 334
N+ N L++ + +C + A+ + + I+++ +++NG DAL
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+FDQM +P+ V + I+ V D L + ++ I P + Y + L
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQV-DNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 395 GRAGLLDQA---VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEP 447
+G A VS + K + PD + +L+ AC V AE ++ +I L+P
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 175/383 (45%), Gaps = 26/383 (6%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+ +++ + NGY V L M R P ++ I+ C + + E E+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC-RICKLAEAEE 337
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN----VVVWTAMISAYI 129
++G ++ + T LI+ + +G + A K F EM R+ V+ +TA+IS +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 130 SCGD-VGSGRRLLDL---APERDVVMWSIVISGYIESGDMVSARELFDKM------PNRD 179
GD V +G+ ++ E D V ++ +I+GY ++G M A + + M PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-- 455
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFK 235
V+++ TL++G GD+ S ++ EM + N++++N ++ G ++G +A++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+ G + + T ++ A + G +D + + G + + N L++ +
Sbjct: 516 EFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 296 GVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
G++E + N + + I ++N+++ + N A +++ M + PDG T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 352 VGILSACTHMGLVRDGFLYFQSM 374
++ +++ + FQ M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEM 657
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 167/384 (43%), Gaps = 25/384 (6%)
Query: 82 GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVGSG 137
G WN +I G + +A+ + M + +V+ ++ +++ Y G++
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 138 RRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNG 189
+L+++ + + ++ +I + A E F +M + D + + TL++G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 190 YANSGDVGSFEKVFEEMPERN----VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+ GD+ + K F EM R+ V ++ +I G+ + G +A + F +M +G + P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEP 419
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ T ++ + G + VH + G N+ LID K G ++SA ++
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 306 NCL----DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
+ + + +I ++N+++NGL GN +A+ L + + + D VT+ ++ A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVI 418
G + + M+ + P I + + + G+L+ + M + P+A
Sbjct: 540 GEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 419 WTSLLGACRTHKNVEIAELAFQHL 442
+ SL+ N++ A ++ +
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDM 622
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
PN T+ + +G L EM + P N FT +V K+G + E +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVK 512
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYI 129
+ G ++ T L++ Y G + A ++ EM + +V + +++ +
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 130 SCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----D 179
G + G +LL+ +AP + ++ ++ Y ++ +A ++ M +R D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFK 235
++ L+ G+ + ++ +F+EM + +V +++VLI G+ + +F +A E F
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 236 QMLVEG 241
QM EG
Sbjct: 691 QMRREG 696
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 175/383 (45%), Gaps = 26/383 (6%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
P+ +++ + NGY V L M R P ++ I+ C + + E E+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC-RICKLAEAEE 337
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN----VVVWTAMISAYI 129
++G ++ + T LI+ + +G + A K F EM R+ V+ +TA+IS +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 130 SCGD-VGSGRRLLDL---APERDVVMWSIVISGYIESGDMVSARELFDKM------PNRD 179
GD V +G+ ++ E D V ++ +I+GY ++G M A + + M PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-- 455
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFK 235
V+++ TL++G GD+ S ++ EM + N++++N ++ G ++G +A++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+ G + + T ++ A + G +D + + G + + N L++ +
Sbjct: 516 EFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 296 GVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
G++E + N + + I ++N+++ + N A +++ M + PDG T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 352 VGILSACTHMGLVRDGFLYFQSM 374
++ +++ + FQ M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEM 657
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 167/384 (43%), Gaps = 25/384 (6%)
Query: 82 GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYISCGDVGSG 137
G WN +I G + +A+ + M + +V+ ++ +++ Y G++
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 138 RRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNG 189
+L+++ + + ++ +I + A E F +M + D + + TL++G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 190 YANSGDVGSFEKVFEEMPERN----VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+ GD+ + K F EM R+ V ++ +I G+ + G +A + F +M +G + P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEP 419
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ T ++ + G + VH + G N+ LID K G ++SA ++
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 306 NCL----DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
+ + + +I ++N+++NGL GN +A+ L + + + D VT+ ++ A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVI 418
G + + M+ + P I + + + G+L+ + M + P+A
Sbjct: 540 GEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 419 WTSLLGACRTHKNVEIAELAFQHL 442
+ SL+ N++ A ++ +
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDM 622
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQ 73
PN T+ + +G L EM + P N FT +V K+G + E +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVK 512
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAYI 129
+ G ++ T L++ Y G + A ++ EM + +V + +++ +
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 130 SCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----D 179
G + G +LL+ +AP + ++ ++ Y ++ +A ++ M +R D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFK 235
++ L+ G+ + ++ +F+EM + +V +++VLI G+ + +F +A E F
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 236 QMLVEG 241
QM EG
Sbjct: 691 QMRREG 696