Miyakogusa Predicted Gene

Lj4g3v0450460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450460.1 Non Chatacterized Hit- tr|I3S222|I3S222_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.71,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF1218,Protein of unknown function DUF1218,CUFF.47219.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) ...   216   6e-57
AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) ...   201   2e-52
AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) ...   186   8e-48
AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) ...   174   3e-44
AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) ...   141   2e-34
AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) ...   117   4e-27
AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) ...    70   5e-13
AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) ...    66   1e-11

>AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:22490430-22491330 REVERSE LENGTH=180
          Length = 180

 Score =  216 bits (550), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 112/164 (68%), Positives = 133/164 (81%)

Query: 1   MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFI 60
           MAS L+L +VF+FD+IAF LAV AEQRR T  + R +    YC YD DIATGLGVGS  +
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRDLSYCVYDKDIATGLGVGSFLV 60

Query: 61  LVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTK 120
           L++ Q++IMV +RCLCCG+A+ PSGSRSWAI LFITTW+ F IA  CLLAGSVRNAYHTK
Sbjct: 61  LLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTK 120

Query: 121 YRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
           YR   G+ +PSC++LRKGVFGAGAAFIVLTGI SELYYV+ S+A
Sbjct: 121 YRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRA 164


>AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:13723903-13724872 FORWARD LENGTH=173
          Length = 173

 Score =  201 bits (511), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 95/170 (55%), Positives = 124/170 (72%), Gaps = 1/170 (0%)

Query: 1   MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGR-EYCQYDSDIATGLGVGSLF 59
           MAS +V A+VF+F++IAF LAV AEQRR+TA ++++ E +  YC YDSD ATG GVG+  
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 60  ILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHT 119
             V+ Q++IM+V+RC CCGK ++P GSR+ A+ LFI +W+ F+IA  CLLAGSV NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 120 KYRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKAIMAPL 169
           KYR +  DN P CQTLRKGVF AGA+F+    I S+ YY  +  A  A L
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASL 170


>AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:19708114-19709128 FORWARD LENGTH=175
          Length = 175

 Score =  186 bits (471), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 119/166 (71%), Gaps = 2/166 (1%)

Query: 1   MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGR-EYCQYDSDIATGLGVGSLF 59
           MAS LV+ +VF+ D+IA  LA+ AEQRR+   ++ + E   E+C+Y SDIAT  G G+  
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 60  ILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHT 119
           +L   QVIIMV +RC CCGKA++P GSR+  I LF+  W+ F+IA  CLLAGS+RNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 120 KYRDLMG-DNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
            YR +   +N PSC+ +RKGVF AGA+F + T I S+ YY+S+S+A
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRA 166


>AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr3:5226489-5227666 REVERSE LENGTH=175
          Length = 175

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 2/166 (1%)

Query: 1   MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGR-EYCQYDSDIATGLGVGSLF 59
           MAS LV+ +VF+ D+IA  LA+ AEQRR+   +  + + + +YC Y +DIAT  G G+  
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 60  ILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHT 119
           +L   QV+IM  +RC CCGK++ P GSR+ AI LF+  W+ F+IA  CLLA S+RNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 120 KYRDLMG-DNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
           +YR +   ++ PSC+ +RKGVF AGAAF + T I S+ YYV +S+A
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166


>AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:4589218-4590362 REVERSE LENGTH=188
          Length = 188

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 113/168 (67%), Gaps = 4/168 (2%)

Query: 2   ASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNA-EGREYCQYDSDIATGLGVGSLFI 60
           AS+LV  +V    ++AF  ++ AE+RR+    +++      +C YDSD+ATG GVG+   
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 61  LVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTK 120
           L+S + ++M VT+C+C G+ + P   R+W+I  FI++W+TF++A +C++AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 121 YRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKAIMAP 168
           Y   +     SC +LRKG+F AGA FIV T + +  YY+ F+K++ +P
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170


>AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:25570322-25571562 FORWARD LENGTH=201
          Length = 201

 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 2/161 (1%)

Query: 6   VLAVVFLFDIIAFALAVVAEQRRNTASLLRNA-EGREYCQYDSDIATGLGVGSLFILVSC 64
           +L VV    ++AF  A  AE+RR+TA  + +  + +  C+Y ++ +T  G+ +  +L+  
Sbjct: 7   ILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVS 66

Query: 65  QVIIMVVTRCLCCGKAMRPSGSRS-WAICLFITTWLTFIIAASCLLAGSVRNAYHTKYRD 123
           Q ++  VT+CLC GK +    S + WAI  F+ +W++F+ A +CLL GS RNAYHTK   
Sbjct: 67  QAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEG 126

Query: 124 LMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
           +      SC  L  GVF AGAAF +++ IA+ LYY++ SKA
Sbjct: 127 IYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKA 167


>AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656519-5657970 FORWARD LENGTH=209
          Length = 209

 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 9/172 (5%)

Query: 9   VVFLFDIIAFALAVVAEQRRNTAS--LLRNAEGREYCQYDSDIATGLGVGSLFILVSCQV 66
           V+FL  +++   A VAE  R   S   +  ++    C Y    A  LG  S   L+  Q+
Sbjct: 11  VLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFTSALFLMMAQI 70

Query: 67  IIMVVTRCLCCGKAMRPSGSRSWAICL--FITTWLTFIIAASCLLAGSVRNAYHTKYRDL 124
           I+ V + C CC K   PS S +W I L  F+ +W TF+IA   LL+G+  N  HT+  + 
Sbjct: 71  IVSVSSGCFCCRKGPAPSRS-NWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTE--ES 127

Query: 125 MGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYY--VSFSKAIMAPLPMLGT 174
           M      C  ++ GVF  GA   ++T     +YY  ++ +K I+A     GT
Sbjct: 128 MNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAATTTQGT 179


>AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656700-5657970 FORWARD LENGTH=175
          Length = 175

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 43  CQYDSDIATGLGVGSLFILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICL--FITTWLT 100
           C Y    A  LG  S   L+  Q+I+ V + C CC K   PS S +W I L  F+ +W T
Sbjct: 13  CTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRS-NWIISLICFVVSWFT 71

Query: 101 FIIAASCLLAGSVRNAYHTKYRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYY-- 158
           F+IA   LL+G+  N  HT+  + M      C  ++ GVF  GA   ++T     +YY  
Sbjct: 72  FVIAFLVLLSGAALNDEHTE--ESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLC 129

Query: 159 VSFSKAIMAPLPMLGT 174
           ++ +K I+A     GT
Sbjct: 130 LTSNKQIVAATTTQGT 145