Miyakogusa Predicted Gene
- Lj4g3v0450200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450200.1 Non Chatacterized Hit- tr|I3T4M7|I3T4M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,58.96,0,LISH,LisH
dimerisation motif; CTLH,CTLH, C-terminal LisH motif; RAN BINDING
PROTEIN 9-RELATED,NULL; ,CUFF.47197.1
(243 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61150.6 | Symbols: | LisH and RanBPM domains containing pro... 251 4e-67
AT1G61150.4 | Symbols: | LisH and RanBPM domains containing pro... 251 4e-67
AT1G61150.2 | Symbols: | LisH and RanBPM domains containing pro... 251 4e-67
AT1G61150.1 | Symbols: | LisH and RanBPM domains containing pro... 250 6e-67
AT1G61150.5 | Symbols: | LisH and RanBPM domains containing pro... 250 8e-67
AT1G61150.7 | Symbols: | LisH and RanBPM domains containing pro... 199 1e-51
AT1G61150.3 | Symbols: | LisH and RanBPM domains containing pro... 199 1e-51
AT1G11110.1 | Symbols: | LisH and RanBPM domains containing pro... 160 9e-40
AT4G09300.1 | Symbols: | LisH and RanBPM domains containing pro... 148 3e-36
AT4G09340.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 72 2e-13
AT1G06060.1 | Symbols: | LisH and RanBPM domains containing pro... 70 2e-12
AT1G35470.2 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 65 4e-11
AT1G35470.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 59 2e-09
AT3G55070.2 | Symbols: | LisH/CRA/RING-U-box domains-containing... 55 4e-08
AT3G55070.1 | Symbols: | LisH/CRA/RING-U-box domains-containing... 54 9e-08
AT5G66810.1 | Symbols: | CONTAINS InterPro DOMAIN/s: CTLH, C-te... 48 8e-06
>AT1G61150.6 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 251 bits (640), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 22 KDLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVAD 81
K + T +W +K+RK+DMN +VM+FL+TEGY EAAEKF E+G + ID+ + D
Sbjct: 5 KKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITD 64
Query: 82 RMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAR 141
RMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKTEEAL++A+
Sbjct: 65 RMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQ 124
Query: 142 EDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRF 201
E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA ILT+Q
Sbjct: 125 EELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSH 184
Query: 202 EQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
E+D +L LLKML W QL E YP + D S G+
Sbjct: 185 EKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 220
>AT1G61150.4 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 251 bits (640), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 22 KDLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVAD 81
K + T +W +K+RK+DMN +VM+FL+TEGY EAAEKF E+G + ID+ + D
Sbjct: 5 KKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITD 64
Query: 82 RMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAR 141
RMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKTEEAL++A+
Sbjct: 65 RMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQ 124
Query: 142 EDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRF 201
E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA ILT+Q
Sbjct: 125 EELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSH 184
Query: 202 EQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
E+D +L LLKML W QL E YP + D S G+
Sbjct: 185 EKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 220
>AT1G61150.2 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 251 bits (640), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 22 KDLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVAD 81
K + T +W +K+RK+DMN +VM+FL+TEGY EAAEKF E+G + ID+ + D
Sbjct: 5 KKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITD 64
Query: 82 RMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAR 141
RMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKTEEAL++A+
Sbjct: 65 RMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQ 124
Query: 142 EDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRF 201
E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA ILT+Q
Sbjct: 125 EELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSH 184
Query: 202 EQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
E+D +L LLKML W QL E YP + D S G+
Sbjct: 185 EKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 220
>AT1G61150.1 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542928-22544355 FORWARD LENGTH=243
Length = 243
Score = 250 bits (639), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 22 KDLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVAD 81
K + T +W +K+RK+DMN +VM+FL+TEGY EAAEKF E+G + ID+ + D
Sbjct: 22 KKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITD 81
Query: 82 RMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAR 141
RMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKTEEAL++A+
Sbjct: 82 RMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQ 141
Query: 142 EDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRF 201
E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA ILT+Q
Sbjct: 142 EELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSH 201
Query: 202 EQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
E+D +L LLKML W QL E YP + D S G+
Sbjct: 202 EKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 237
>AT1G61150.5 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543122-22544355 FORWARD LENGTH=220
Length = 220
Score = 250 bits (638), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 160/214 (74%), Gaps = 2/214 (0%)
Query: 26 TYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAV 85
T +W +K+RK+DMN +VM+FL+TEGY EAAEKF E+G + ID+ + DRMAV
Sbjct: 3 TREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEIDLATITDRMAV 62
Query: 86 KTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLA 145
K A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKTEEAL++A+E+LA
Sbjct: 63 KKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELA 122
Query: 146 PTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRFEQDS 205
P E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA ILT+Q E+D
Sbjct: 123 PRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDP 182
Query: 206 QLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
+L LLKML W QL E YP + D S G+
Sbjct: 183 KLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 214
>AT1G61150.7 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543304-22544355 FORWARD LENGTH=193
Length = 193
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 74 IDIGNVADRMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKT 133
ID+ + DRMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKT
Sbjct: 24 IDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKT 83
Query: 134 EEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNA 193
EEAL++A+E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA
Sbjct: 84 EEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNA 143
Query: 194 VILTNQRFEQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
ILT+Q E+D +L LLKML W QL E YP + D S G+
Sbjct: 144 AILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 187
>AT1G61150.3 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543304-22544355 FORWARD LENGTH=193
Length = 193
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 74 IDIGNVADRMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKT 133
ID+ + DRMAVK A+QNG+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIR GKT
Sbjct: 24 IDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKT 83
Query: 134 EEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNA 193
EEAL++A+E+LAP E+NQ+FLE++EKTVALL F D S CP ELLD+S RLK A++VNA
Sbjct: 84 EEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNA 143
Query: 194 VILTNQRFEQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDFMGSYGR 239
ILT+Q E+D +L LLKML W QL E YP + D S G+
Sbjct: 144 AILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDL--STGK 187
>AT1G11110.1 | Symbols: | LisH and RanBPM domains containing
protein | chr1:3710364-3712108 FORWARD LENGTH=277
Length = 277
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 134/204 (65%), Gaps = 8/204 (3%)
Query: 30 WLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAVKTAL 89
W +IRK+DMN++VM+FL+ EGY EA EKF E+G + + + +++DR+AVK +
Sbjct: 61 WEQYLTTAEIRKEDMNRLVMNFLVVEGYLEAVEKFQKESGTKQ-VGVASISDRLAVKRDI 119
Query: 90 QNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKT-EEALKYAREDLAPTV 148
++GD++ A+EKLN ++PEIL T+ F L Q + IE IR G T +E +A ++L P V
Sbjct: 120 ESGDLEDAVEKLNAINPEILKTN----FSLNQQRFIERIRIGVTIKETFNFAEKELKPLV 175
Query: 149 EKNQSFLEDMEKTVALLGFKDPSNCPYG--ELLDISLRLKFANKVNAVILTNQRFEQDSQ 206
E+N +FLE++EKT+A+L F+D + P ELLD S K A +VNA ILT+Q + +
Sbjct: 176 EQNLAFLEELEKTMAILRFRDLPDIPEAERELLDNSRWFKTAAEVNAAILTSQTGLKCPK 235
Query: 207 LLYLLKMLRWVNIQLAEVTDYPLM 230
LL LLKML W QL E +YP M
Sbjct: 236 LLDLLKMLTWTQNQLDEKVEYPRM 259
>AT4G09300.1 | Symbols: | LisH and RanBPM domains containing
protein | chr4:5899008-5900689 FORWARD LENGTH=224
Length = 224
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 126/206 (61%), Gaps = 6/206 (2%)
Query: 30 WLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAVKTAL 89
W + ++I +DMN++VM+ L+ EGY EAAEKF E+ D+ ++ +R+ V A+
Sbjct: 13 WESKLSDVEILIEDMNRLVMNLLVAEGYREAAEKFKEESITMPEEDLASMNERLEVIKAI 72
Query: 90 QNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVE 149
++ +++ AIEKLN ++PEI+ TS F L Q +IELIR KTEEA+ +A+E LAP E
Sbjct: 73 ESRNLEDAIEKLNALNPEIIKTS----FHLHQQMLIELIREKKTEEAVAFAQEKLAPLAE 128
Query: 150 KNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRFEQDSQLLY 209
+N++ ++EKTV +L + NCP EL S ++ A+ VN I T+Q E+ +L
Sbjct: 129 ENEALQRELEKTVCILVTEGLPNCPSRELFHNSQWIRTASHVNEAIHTSQTGEKGPELER 188
Query: 210 LLKMLRWVNIQLAE--VTDYPLMRDF 233
LLK L W QL E V YP M DF
Sbjct: 189 LLKELIWTQNQLDEKTVYVYPRMNDF 214
>AT4G09340.1 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr4:5925015-5927597 REVERSE
LENGTH=447
Length = 447
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 13 EEIKRTFGVK----DLKTYVKWLNTRRGIKIRKQDMNK-----IVMDFLLTEGYDEAAEK 63
EE+ FG + D K Y ++ I I K + +V ++LL GY+E
Sbjct: 187 EEVTVNFGQEKFAFDFKGYESSERNKQQIAIEKISIPSNMSLGLVKNYLLHYGYEETHHA 246
Query: 64 FHLET--------GIQ-TGIDIGNVA--DRMAVKTALQNGDVQAAIEKLNDMDPEIL-DT 111
L T G Q GID + A +R ++ ++ G++ AA+ KL D P+++ +
Sbjct: 247 LDLATNSTLPPINGAQENGIDDTSYALHERKILRQLIRKGEIDAALAKLRDSYPQLVQND 306
Query: 112 SPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKDPS 171
+ F L + IEL+R G EEA+KY R +LA + +F + +E ALL ++ P
Sbjct: 307 KSEVCFLLHCQKFIELVRIGALEEAVKYGRMELAKFIGLT-TFQDILEDCFALLVYERPE 365
Query: 172 NCPYGELLDISLRLKFANKVNAVILTNQ---RFEQDSQLLYLLKMLRWVNIQLAEVTD 226
G L+ + R A+ VNA IL+ + + + S L LL+ L ++L + D
Sbjct: 366 ESNVGYFLEETQREVVADTVNAAILSTKPKGKNQSHSHLETLLRQLTACCLELRSLND 423
>AT1G06060.1 | Symbols: | LisH and RanBPM domains containing
protein | chr1:1833071-1834516 FORWARD LENGTH=213
Length = 213
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 43 DMNKIVMDFLLTEGYDEAAEKFHLETGI-QTGIDIGNVADRMAVKTALQNGDVQAAIEKL 101
D++ IVM +LL ++E A+ TG+ Q ID N+ R + + A E
Sbjct: 15 DIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHFILERKALKAFELT 74
Query: 102 NDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKT 161
+ ++L+ + L F L +ELI G EALK+ + LAP K + ++E +E
Sbjct: 75 EQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAP-FGKVKKYVEKLEDV 133
Query: 162 VALLGFKDPSNCPYGELLDISLRLKFANKVNAVIL 196
+ALL ++DP P LL R + A+ +N IL
Sbjct: 134 MALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTIL 168
>AT1G35470.2 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr1:13051636-13054922
REVERSE LENGTH=467
Length = 467
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 29/239 (12%)
Query: 13 EEIKRTFGVK----DLKTYVKWLNTRRGIKIRKQDMNK-----IVMDFLLTEGYDEAAEK 63
EE+ FG K D+K Y ++ + I K + +V +LL GY+E +
Sbjct: 208 EEVLVNFGKKKFAFDIKGYEASERNKQQLAIEKISIPPNIGYGLVKTYLLHYGYEETLDA 267
Query: 64 FHLETG---IQTGIDIGNVAD----------RMAVKTALQNGDVQAAIEKLNDMDPEIL- 109
F+L T ID N D R ++ ++NG++ A+ +L + P+I+
Sbjct: 268 FNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQ 327
Query: 110 DTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKD 169
D + F L + IEL+R GK EE + Y R +LA V F + +E ALL ++
Sbjct: 328 DDKSVVCFLLHCQKFIELVRVGKLEEGVNYGRLELAKFVGLT-GFQDIVEDCFALLAYEK 386
Query: 170 PSNCPYGELLDISLRLKFANKVNAVILTNQRFEQDSQL-----LYLLKMLRWVNIQLAE 223
P L+ S R A+ VNA IL+ ++D Q +L K+LR + + E
Sbjct: 387 PEESSVWYFLEDSQRELVADAVNAAILSTNPNKKDVQRSCHLQSHLEKLLRQLTVCCLE 445
>AT1G35470.1 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr1:13051636-13054922
REVERSE LENGTH=465
Length = 465
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 13 EEIKRTFGVK----DLKTYVKWLNTRRGIKIRKQDMNK-----IVMDFLLTEGYDEAAEK 63
EE+ FG K D+K Y ++ + I K + +V +LL GY+E +
Sbjct: 208 EEVLVNFGKKKFAFDIKGYEASERNKQQLAIEKISIPPNIGYGLVKTYLLHYGYEETLDA 267
Query: 64 FHLETG---IQTGIDIGNVAD----------RMAVKTALQNGDVQAAIEKLNDMDPEIL- 109
F+L T ID N D R ++ ++NG++ A+ +L + P+I+
Sbjct: 268 FNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQ 327
Query: 110 DTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKD 169
D + F L + IEL+ GK EE + Y R +LA V F + +E ALL ++
Sbjct: 328 DDKSVVCFLLHCQKFIELV--GKLEEGVNYGRLELAKFVGLT-GFQDIVEDCFALLAYEK 384
Query: 170 PSNCPYGELLDISLRLKFANKVNAVILTNQRFEQDSQL-----LYLLKMLRWVNIQLAE 223
P L+ S R A+ VNA IL+ ++D Q +L K+LR + + E
Sbjct: 385 PEESSVWYFLEDSQRELVADAVNAAILSTNPNKKDVQRSCHLQSHLEKLLRQLTVCCLE 443
>AT3G55070.2 | Symbols: | LisH/CRA/RING-U-box domains-containing
protein | chr3:20408377-20410297 FORWARD LENGTH=323
Length = 323
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 23 DLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADR 82
D++ +W NT+ + +I++D++L Y E A K + I +DI +
Sbjct: 133 DVENITEWNNTK---------LKRILVDYMLRMSYFETATKLSESSNIMDLVDIDIFREA 183
Query: 83 MAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTE---EALKY 139
V AL+N +V +A+ D + + F+L+ + IEL+R E +A++Y
Sbjct: 184 KKVIDALKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKAIQY 243
Query: 140 AREDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELL 179
AR+ LA + +++++ +A L FK + C ++L
Sbjct: 244 ARKHLASW---GTTHMKELQHVLATLAFKSTTECSKYKVL 280
>AT3G55070.1 | Symbols: | LisH/CRA/RING-U-box domains-containing
protein | chr3:20408377-20410887 FORWARD LENGTH=418
Length = 418
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 23 DLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADR 82
D++ +W NT+ + +I++D++L Y E A K + I +DI +
Sbjct: 133 DVENITEWNNTK---------LKRILVDYMLRMSYFETATKLSESSNIMDLVDIDIFREA 183
Query: 83 MAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTE---EALKY 139
V AL+N +V +A+ D + + F+L+ + IEL+R E +A++Y
Sbjct: 184 KKVIDALKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKAIQY 243
Query: 140 AREDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQ 199
AR+ LA + +++++ +A L FK + C ++L LR +L +Q
Sbjct: 244 ARKHLASW---GTTHMKELQHVLATLAFKSTTECSKYKVL-FELR-------QWDVLVDQ 292
Query: 200 RFEQDSQLLYLLKMLRWVNIQL 221
F+Q+ LY + M +NI L
Sbjct: 293 -FKQEFCKLYGMTMEPLLNIYL 313
>AT5G66810.1 | Symbols: | CONTAINS InterPro DOMAIN/s: CTLH,
C-terminal LisH motif (InterPro:IPR006595); BEST
Arabidopsis thaliana protein match is: LisH and RanBPM
domains containing protein (TAIR:AT1G61150.1); Has 333
Blast hits to 242 proteins in 88 species: Archae - 0;
Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152;
Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
| chr5:26672926-26676450 FORWARD LENGTH=750
Length = 750
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 85 VKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDL 144
+++++++GD++ AI+ L P +LD + FRLQ+ + IEL+R G E A+ R +
Sbjct: 120 IRSSIESGDIETAIDILRSHAPFVLDDH-RILFRLQKQKFIELLRKGTHEAAIDCLRTCV 178
Query: 145 APTV 148
AP
Sbjct: 179 APCA 182