Miyakogusa Predicted Gene

Lj4g3v0450030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450030.1 Non Chatacterized Hit- tr|I3SJL2|I3SJL2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.26,0,SECRETORY
CARRIER-ASSOCIATED MEMBRANE PROTEIN,NULL; SECRETORY CARRIER-ASSOCIATED
MEMBRANE PROTEIN (S,CUFF.47209.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61250.1 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   395   e-110
AT1G11180.1 | Symbols:  | Secretory carrier membrane protein (SC...   382   e-106
AT1G11180.2 | Symbols:  | Secretory carrier membrane protein (SC...   375   e-104
AT2G20840.1 | Symbols:  | Secretory carrier membrane protein (SC...   375   e-104
AT1G61250.2 | Symbols: SC3 | secretory carrier 3 | chr1:22586035...   346   1e-95
AT1G03550.1 | Symbols:  | Secretory carrier membrane protein (SC...   335   2e-92
AT1G32050.1 | Symbols:  | SCAMP family protein | chr1:11528616-1...   286   1e-77

>AT1G61250.1 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588664 FORWARD LENGTH=289
          Length = 289

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/291 (67%), Positives = 219/291 (75%), Gaps = 5/291 (1%)

Query: 1   MAGRYDSNPF-DEEEVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDT--S 57
           MA RYD NPF +EEEVNPF+N   VPPA+NSRLSPL PEPV ++YG   TVDIPLD   +
Sbjct: 1   MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFDYG--RTVDIPLDRAGT 58

Query: 58  NDLKNKEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEIPV 117
            DLK KEKELQ+KEAELK                      KNWPPFFP+IHHDIANEIPV
Sbjct: 59  QDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPV 118

Query: 118 HLQRLQYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYR 177
           HLQRLQYV F T LGLV+CL WN+IAVT AWIKGEGV IW LA+IYFI+GVPG YVLWYR
Sbjct: 119 HLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYR 178

Query: 178 PLYRAFRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHAXX 237
           PLYRAFR +SAL FGWFFLFYM+HI FC+ AAVAPP+VFKGKSL GIL AIDVL   A  
Sbjct: 179 PLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIV 238

Query: 238 XXXXXXXXXXXXXETVISIWVLQQVYMYFRGSGKAAEMKREAARGALRAAI 288
                        E+V+SIWV+QQVYMYFRGSGK  +M+REAARGALRAA+
Sbjct: 239 GIFYFIGFAFFCLESVVSIWVIQQVYMYFRGSGKQDQMRREAARGALRAAV 289


>AT1G11180.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=291
          Length = 291

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/293 (65%), Positives = 216/293 (73%), Gaps = 7/293 (2%)

Query: 1   MAGRYDSNPFDEE-EVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDT--- 56
           M GRYD N FDE+ EVNPF+NPG VP A+NSRLSPL PEP    +G+G TVDIPLD    
Sbjct: 1   MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPA--GFGYGRTVDIPLDRPGS 58

Query: 57  -SNDLKNKEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEI 115
            + DLK KEKELQ+KEA+L+                      KNWP FFP+IHHDIANEI
Sbjct: 59  GAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEI 118

Query: 116 PVHLQRLQYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLW 175
            V LQRLQY+AF T LGLV+ L WN+IAVT AWIKGEGV IW LAVIYFISGVPG YVLW
Sbjct: 119 LVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLW 178

Query: 176 YRPLYRAFRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHA 235
           YRPLYRAFR++SA  FGWFFLFYM+HI FC+ AAVAPPIVFKGKSL GIL AIDVL   A
Sbjct: 179 YRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQA 238

Query: 236 XXXXXXXXXXXXXXXETVISIWVLQQVYMYFRGSGKAAEMKREAARGALRAAI 288
                          E+V+SIWV+QQVYMYFRGSGKA +M+R+AARGA+RAAI
Sbjct: 239 LVGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRDAARGAMRAAI 291


>AT1G11180.2 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:3745829-3748307 FORWARD
           LENGTH=304
          Length = 304

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/306 (62%), Positives = 215/306 (70%), Gaps = 20/306 (6%)

Query: 1   MAGRYDSNPFDEE-EVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDTS-- 57
           M GRYD N FDE+ EVNPF+NPG VP A+NSRLSPL PEP    +G+G TVDIPLD    
Sbjct: 1   MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPA--GFGYGRTVDIPLDRPGS 58

Query: 58  ---------------NDLKNKEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPP 102
                           DLK KEKELQ+KEA+L+                      KNWP 
Sbjct: 59  GAQNNSCLNVTLLGIQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPT 118

Query: 103 FFPIIHHDIANEIPVHLQRLQYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVI 162
           FFP+IHHDIANEI V LQRLQY+AF T LGLV+ L WN+IAVT AWIKGEGV IW LAVI
Sbjct: 119 FFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVI 178

Query: 163 YFISGVPGAYVLWYRPLYRAFRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLT 222
           YFISGVPG YVLWYRPLYRAFR++SA  FGWFFLFYM+HI FC+ AAVAPPIVFKGKSL 
Sbjct: 179 YFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLA 238

Query: 223 GILAAIDVLDNHAXXXXXXXXXXXXXXXETVISIWVLQQVYMYFRGSGKAAEMKREAARG 282
           GIL AIDVL   A               E+V+SIWV+QQVYMYFRGSGKA +M+R+AARG
Sbjct: 239 GILPAIDVLSAQALVGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRDAARG 298

Query: 283 ALRAAI 288
           A+RAAI
Sbjct: 299 AMRAAI 304


>AT2G20840.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr2:8971925-8974400 REVERSE
           LENGTH=282
          Length = 282

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/286 (63%), Positives = 212/286 (74%), Gaps = 5/286 (1%)

Query: 3   GRYDSNPFDEEEVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDTSNDLKN 62
            RY S+ FD+ E+NPF+NP  VP AT S+LSPL PEP D     GAT+DIPLD+  DLK 
Sbjct: 2   SRYQSHSFDDGEINPFANPTSVPAAT-SKLSPLPPEPYDR----GATMDIPLDSGKDLKA 56

Query: 63  KEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEIPVHLQRL 122
           KEKEL+ KEAELK                      KNWPPFFP+IHHDI+NEIP+HLQR+
Sbjct: 57  KEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRI 116

Query: 123 QYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYRPLYRA 182
           QYVAFT++LGLVVCL WN++AVT AWIKGEG  IWFLA+IYFISGVPGAYV+WYRPLYRA
Sbjct: 117 QYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRA 176

Query: 183 FRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHAXXXXXXX 242
            R +SALKFGWFF  Y+ HI FC+ AAVAPPI+FKGKSLTGIL AIDVL  +        
Sbjct: 177 MRTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVGIFYF 236

Query: 243 XXXXXXXXETVISIWVLQQVYMYFRGSGKAAEMKREAARGALRAAI 288
                   E+++SIWV+QQVYMYFRGSGKAAEMK+EA R A+ AA+
Sbjct: 237 IGFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQEATRRAMMAAL 282


>AT1G61250.2 | Symbols: SC3 | secretory carrier 3 |
           chr1:22586035-22588519 FORWARD LENGTH=274
          Length = 274

 Score =  346 bits (887), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/263 (66%), Positives = 193/263 (73%), Gaps = 5/263 (1%)

Query: 1   MAGRYDSNPF-DEEEVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDT--S 57
           MA RYD NPF +EEEVNPF+N   VPPA+NSRLSPL PEPV ++YG   TVDIPLD   +
Sbjct: 1   MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFDYG--RTVDIPLDRAGT 58

Query: 58  NDLKNKEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEIPV 117
            DLK KEKELQ+KEAELK                      KNWPPFFP+IHHDIANEIPV
Sbjct: 59  QDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPV 118

Query: 118 HLQRLQYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYR 177
           HLQRLQYV F T LGLV+CL WN+IAVT AWIKGEGV IW LA+IYFI+GVPG YVLWYR
Sbjct: 119 HLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYR 178

Query: 178 PLYRAFRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHAXX 237
           PLYRAFR +SAL FGWFFLFYM+HI FC+ AAVAPP+VFKGKSL GIL AIDVL   A  
Sbjct: 179 PLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIV 238

Query: 238 XXXXXXXXXXXXXETVISIWVLQ 260
                        E+V+SIWV+Q
Sbjct: 239 GIFYFIGFAFFCLESVVSIWVIQ 261


>AT1G03550.1 | Symbols:  | Secretory carrier membrane protein
           (SCAMP) family protein | chr1:885851-887778 REVERSE
           LENGTH=283
          Length = 283

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/286 (60%), Positives = 204/286 (71%), Gaps = 4/286 (1%)

Query: 3   GRYDSNPFDEEEVNPFSNPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDTSNDLKN 62
            R+D NPF +EE+NPF+N   VPPA+NS L PL PEP D     GATVDIPLD+ NDL+ 
Sbjct: 2   ARHDPNPFADEEINPFANHTSVPPASNSYLKPLPPEPYDR----GATVDIPLDSGNDLRA 57

Query: 63  KEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEIPVHLQRL 122
           KE ELQ+KE ELK                      KNWP FFP+IHHDI NEIP+HLQ++
Sbjct: 58  KEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKI 117

Query: 123 QYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYRPLYRA 182
           QYVAFTTLLGLV CL WN++AVT AWIKGEG  IW L++IYF++GVPGAYVLWYRPLYRA
Sbjct: 118 QYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRA 177

Query: 183 FRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHAXXXXXXX 242
            R +SALKFG FF FY+ HI FC  AAVAPP++F+GKSLTG L AI++L  +A       
Sbjct: 178 TRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIELLTTNAAVGIMYF 237

Query: 243 XXXXXXXXETVISIWVLQQVYMYFRGSGKAAEMKREAARGALRAAI 288
                   ET+++IWV+QQVY YFRGSGKAAEMKREA +  L  A+
Sbjct: 238 IGAGFFCIETLLNIWVIQQVYAYFRGSGKAAEMKREATKSTLMRAL 283


>AT1G32050.1 | Symbols:  | SCAMP family protein |
           chr1:11528616-11530974 FORWARD LENGTH=264
          Length = 264

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/272 (53%), Positives = 178/272 (65%), Gaps = 12/272 (4%)

Query: 1   MAGRYDSNPFDEEE--VNPFSNPG-RVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDTS 57
           M   +D NPFDE+E  VNPFS  G RVP A+          PV+Y     ATVDIPLD  
Sbjct: 1   MNRHHDPNPFDEDEEIVNPFSKGGGRVPAAS---------RPVEYGQSLDATVDIPLDNM 51

Query: 58  NDLKNKEKELQSKEAELKXXXXXXXXXXXXXXXXXXXXXXKNWPPFFPIIHHDIANEIPV 117
           ND   K+++L   EAEL+                      KNWPPFFPIIHHDIA EIPV
Sbjct: 52  NDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPV 111

Query: 118 HLQRLQYVAFTTLLGLVVCLTWNVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYR 177
           H Q+LQY+AF + LG+V+CL +NVIA    WIKG GVKI+FLA IY + G P +YVLWYR
Sbjct: 112 HAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKIFFLATIYALIGCPLSYVLWYR 171

Query: 178 PLYRAFRNESALKFGWFFLFYMIHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHAXX 237
           PLYRA R +SALKFGWFF  Y+IHIGFCI+AA+APPI F GKSLTG+LAAIDV+ +    
Sbjct: 172 PLYRAMRTDSALKFGWFFFTYLIHIGFCIVAAIAPPIFFHGKSLTGVLAAIDVISDSLLA 231

Query: 238 XXXXXXXXXXXXXETVISIWVLQQVYMYFRGS 269
                        E+++S+WVLQ++Y+YFRG+
Sbjct: 232 GIFYFIGFGLFCLESLLSLWVLQKIYLYFRGN 263