Miyakogusa Predicted Gene

Lj4g3v0448950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0448950.1 Non Chatacterized Hit- tr|I1J6L0|I1J6L0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20458 PE,86.69,0,no
description,Aldolase-type TIM barrel; no description,NULL; no
description,NAD(P)-binding domain; ,CUFF.47226.1
         (511 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06350.1 | Symbols: EMB3004, MEE32 | dehydroquinate dehydrata...   664   0.0  

>AT3G06350.1 | Symbols: EMB3004, MEE32 | dehydroquinate dehydratase,
           putative / shikimate dehydrogenase, putative |
           chr3:1924536-1927701 REVERSE LENGTH=603
          Length = 603

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/505 (66%), Positives = 394/505 (78%), Gaps = 3/505 (0%)

Query: 3   KSATLICIPIMGETIEKMKIDVQKAKQNGADLVEIRLDHLTTFNPSPDLHTLIQDRLLPV 62
           K+ +LIC P+M ++I+KM I+  KA + GADLVEIRLD L  FNP  DL T+I+   LP 
Sbjct: 91  KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 150

Query: 63  LITYRPTWEGGKYDGDENKRLDALRLAMELGADYIDVELKVAHEFYDSIRGKTFEKTKVI 122
           L TYRP WEGG+Y+GDEN+R D LRLAMELGADYIDVEL+VA EF  SI GK   K KVI
Sbjct: 151 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 210

Query: 123 VSSHNYQLTPSVEDLGNLAARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPFIGLV 182
           VSSHNYQ TPSVEDL  L ARIQ TGADIVKIATTAV+I DVARMF I   +QVP IGLV
Sbjct: 211 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 270

Query: 183 MGDRGLISRVLCAKFGGYLTFGTLESGVVSAPGQPTLKDLLYLYNFRQLGPMTKVYGIIG 242
           MG+RGL+SR+LC+KFGGYLTFGTL+S  VSAPGQPT+KDLL LYNFR++GP TKVYGIIG
Sbjct: 271 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 330

Query: 243 KPVSHSKSPMLFNEVFKSVGLDAVYVYLLVDDLANFLRTYSSTDFAGFSVTIPHKEAALK 302
           KPVSHSKSP++ N+ FKSV  + VYV+LLVD+L +FL+ YSS+DFAGFS TIPHKEAAL+
Sbjct: 331 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 390

Query: 303 CCDEVDPVAKSIGAVNCVIRRPTDGKLIGYNTDYVGSISAIEDGLR---GKHNVSGASSP 359
           CCDEVDP+AKSIGAVN ++RR +DGKL+GYNTD +GSISAIEDGLR      +V  +SSP
Sbjct: 391 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 450

Query: 360 LAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRAREXXXXXXXXXXXXXXXXNFH 419
           LA K  VVI                  +VVIANRTY+RA E                N+H
Sbjct: 451 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 510

Query: 420 PEDGMILANTTSIGMQPKVDETPVSKHALKFYSLVFDAVYTPKMTRLLKEAEEAGATIVT 479
           PEDGM+LANTTS+GMQP V+ETP+SK ALK Y+LVFDAVYTP++TRLL+EAEE+GA  V+
Sbjct: 511 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 570

Query: 480 GLEMFIGQAYGQYENYTGLPAPKEL 504
           G EMF+ QAY Q+E +TGLPAPKEL
Sbjct: 571 GSEMFVRQAYEQFEIFTGLPAPKEL 595