Miyakogusa Predicted Gene

Lj4g3v0435290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0435290.1 Non Chatacterized Hit- tr|I1HIG9|I1HIG9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,29.05,0.0000000000004,seg,NULL; PLAC8,Uncharacterised protein
family Cys-rich; A_thal_Cys_rich: uncharacterized Cys-rich
d,CUFF.47128.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11380.1 | Symbols:  | PLAC8 family protein | chr1:3832695-38...   253   9e-68
AT5G05350.1 | Symbols:  | PLAC8 family protein | chr5:1585757-15...    63   2e-10
AT3G18470.1 | Symbols:  | PLAC8 family protein | chr3:6335000-63...    63   3e-10
AT1G52200.1 | Symbols:  | PLAC8 family protein | chr1:19442271-1...    62   6e-10
AT2G40935.1 | Symbols:  | PLAC8 family protein | chr2:17083199-1...    57   1e-08
AT1G14870.1 | Symbols: PCR2 | PLANT CADMIUM RESISTANCE 2 | chr1:...    56   3e-08
AT3G10980.1 | Symbols:  | PLAC8 family protein | chr3:3438810-34...    55   5e-08
AT5G35525.1 | Symbols:  | PLAC8 family protein | chr5:13707084-1...    52   7e-07
AT1G14880.1 | Symbols: PCR1 | PLANT CADMIUM RESISTANCE 1 | chr1:...    50   2e-06
AT2G45010.1 | Symbols:  | PLAC8 family protein | chr2:18568045-1...    50   2e-06
AT2G45010.2 | Symbols:  | PLAC8 family protein | chr2:18568782-1...    49   3e-06

>AT1G11380.1 | Symbols:  | PLAC8 family protein |
           chr1:3832695-3833921 FORWARD LENGTH=254
          Length = 254

 Score =  253 bits (647), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 150/204 (73%), Gaps = 2/204 (0%)

Query: 79  LLDFDMLCSTVALRAAQGKWGKLQXXXXXXXXXXXXXXXXLRMWEGDLFDCFDHRRIALE 138
           +LDFD+LCSTVAL+  QGKW KL+                LR+WEGD+ DCF+ R + +E
Sbjct: 44  VLDFDLLCSTVALQT-QGKWRKLESSEGEDATEDDYGGGVLRLWEGDVMDCFEDRHLCIE 102

Query: 139 SIFCPCYRFGKNMKRAGFGSCYIQAAVYFLLAIGSLISFIAFGVTRRNCFLYLALTFIVS 198
           S  CPCYRFGKNM R GFGSC++Q AV+ +L  G L + +AF VT+R+CFLYLA+ F++ 
Sbjct: 103 SACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVVAFAVTKRHCFLYLAIAFVLL 162

Query: 199 IGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCCTLCQESRTLEMNNVQDGTWHGRG 258
           IG+YLGF+R  IR+KFNI+G+DS LDD ++H  CP CTL QES+TLEMNNV DG WHGRG
Sbjct: 163 IGSYLGFFRMLIRRKFNIRGTDSFLDDFIHHLVCPFCTLTQESKTLEMNNVHDGIWHGRG 222

Query: 259 DTICIGGFGE-KMRASLYPPPILS 281
           DT+CIGG+ E K    L+ PP+++
Sbjct: 223 DTLCIGGYSEGKAFLELHSPPVIA 246


>AT5G05350.1 | Symbols:  | PLAC8 family protein |
           chr5:1585757-1587337 FORWARD LENGTH=526
          Length = 526

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGSCYIQAAVYFLLAIGSLISFIAFG 181
           W   + D ++   +A  S+FC    FG NM+R GFG+ Y+  A + L  +     F    
Sbjct: 307 WREGVLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFCLAPFFIFNLAA 366

Query: 182 VT-----RRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSD-----SSLDDCVYHFA 231
           +       R+   Y  +   +    Y GF+R ++RK+F + G +      ++ DC     
Sbjct: 367 INIDNEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGRPAIADCTLWLF 426

Query: 232 CPCCTLCQESRT 243
           C  C+L QE RT
Sbjct: 427 CCWCSLAQEVRT 438


>AT3G18470.1 | Symbols:  | PLAC8 family protein |
           chr3:6335000-6335698 REVERSE LENGTH=133
          Length = 133

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 65/163 (39%), Gaps = 44/163 (26%)

Query: 120 RMWEGDLFDCFDHRRIALESIFCPCYRFGK-----NMKRAGFGSCYIQAAVYFLLAIGSL 174
           + W   LF C +    A  + FCPC  FG+     +  R G G C +    Y L+     
Sbjct: 3   KQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGV---FYGLIC---- 55

Query: 175 ISFIAFGVTRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPC 234
                       C + L   F  +       YRT+IR KF +  S +S  DCV HF C C
Sbjct: 56  ------------CVVGLPCLFSCT-------YRTKIRSKFGLPESPTS--DCVTHFFCEC 94

Query: 235 CTLCQESRTLEMNNVQDGTWHGRGDTICIGGFGEKMRASLYPP 277
           C LCQE R L+   +               G+   M+ ++ PP
Sbjct: 95  CALCQEHRELKTRGLDPSI-----------GWSGNMQRTMAPP 126


>AT1G52200.1 | Symbols:  | PLAC8 family protein |
           chr1:19442271-19443407 REVERSE LENGTH=190
          Length = 190

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 28/140 (20%)

Query: 120 RMWEGDLFDCFDHRRIALESIFCPCYRFGK--NMKRAGFGSCYIQAAVYFLLAIGSLISF 177
           R W   LFDC   +  A+ +   PC  FG+   +   G  +C +   +Y L+ + +L S 
Sbjct: 51  RPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLM-MPALCSH 109

Query: 178 IAFGVTRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCCTL 237
              G                        YR ++R+KFN+   ++   DC  H  CPCC+L
Sbjct: 110 WVMGSK----------------------YREKMRRKFNL--VEAPYSDCASHVLCPCCSL 145

Query: 238 CQESRTLEMNNVQDG-TWHG 256
           CQE R L++ N+     W+G
Sbjct: 146 CQEYRELKIRNLDPSLGWNG 165


>AT2G40935.1 | Symbols:  | PLAC8 family protein |
           chr2:17083199-17084216 FORWARD LENGTH=190
          Length = 190

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 120 RMWEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGS----CYIQAAVYFLLAIGSLI 175
           R W   +  CFD  +     +FCPCY FGKN +  G G+    C      + L  + ++ 
Sbjct: 45  RQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGTFAGPCLTHCISWAL--VNTIC 102

Query: 176 SFIAFGVTRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCC 235
            F   G       L L   F   +  Y   YR  +R K+N++  ++   D V HF C  C
Sbjct: 103 CFATNGA-----LLGLPGCF---VSCYACGYRKSLRAKYNLQ--EAPCGDFVTHFFCHLC 152

Query: 236 TLCQESRTL 244
            +CQE R +
Sbjct: 153 AICQEYREI 161


>AT1G14870.1 | Symbols: PCR2 | PLANT CADMIUM RESISTANCE 2 |
           chr1:5128591-5129458 REVERSE LENGTH=152
          Length = 152

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 27/126 (21%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGK--NMKRAGFGSCYIQAAVYFLLAIGSLISFIA 179
           W     DCF   +    + +CPC  FG+   +   G  SC    A+Y L+A+        
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAV-------- 67

Query: 180 FGVTRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCCTLCQ 239
             VT   C              Y  FYR ++R ++NIKG D +  DC+ HF C  C+L Q
Sbjct: 68  --VTGCACI-------------YSCFYRGKMRAQYNIKGDDCT--DCLKHFCCELCSLTQ 110

Query: 240 ESRTLE 245
           + R L+
Sbjct: 111 QYRELK 116


>AT3G10980.1 | Symbols:  | PLAC8 family protein |
           chr3:3438810-3440501 FORWARD LENGTH=563
          Length = 563

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGSCYIQAAVYFLLAIGSLISFIAFG 181
           W G + D +D   +A  S+FC    FG NM+R GFG+ Y+  A + L  +     F    
Sbjct: 336 WSGGILDIWDDISLAYLSLFCTFCVFGWNMERVGFGNMYVHIATFILFCLAPFFIFNLAA 395

Query: 182 V-----TRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSD-----SSLDDCVYHFA 231
           V     T R       +   V    Y GF+R ++RK+F +   +     +++ DC     
Sbjct: 396 VNIDNETVREALGISGILLCVFGLLYGGFWRIQMRKRFKLPSYNFCFGRAAIADCALWLC 455

Query: 232 CPCCTLCQESRT 243
           C  C+L QE RT
Sbjct: 456 CCWCSLAQEVRT 467


>AT5G35525.1 | Symbols:  | PLAC8 family protein |
           chr5:13707084-13707818 FORWARD LENGTH=152
          Length = 152

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 27/126 (21%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGK--NMKRAGFGSCYIQAAVYFLLAIGSLISFIA 179
           W     DCF   +    +  CPC  FG+  ++   G  SC    A+Y LLA         
Sbjct: 16  WSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAA-------- 67

Query: 180 FGVTRRNCFLYLALTFIVSIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCCTLCQ 239
             +T   C              Y   YR +IR ++NI+G   +  DC+ HF C  C L Q
Sbjct: 68  --ITGCGCL-------------YSCIYRGKIRAQYNIRGDGCT--DCLKHFCCELCALTQ 110

Query: 240 ESRTLE 245
           E R L+
Sbjct: 111 EYRELK 116


>AT1G14880.1 | Symbols: PCR1 | PLANT CADMIUM RESISTANCE 1 |
           chr1:5132791-5133663 REVERSE LENGTH=151
          Length = 151

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 25/125 (20%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGSCYIQAAVYFLLAIGSLISFIAFG 181
           W     DCF   R    ++ CPC  FG+  +    GS                 S  A G
Sbjct: 15  WSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGS----------------KSCCAAG 58

Query: 182 VTRRNCFLYLALTFIVSIG-AYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACPCCTLCQE 240
                  LY+ +  I S G  Y  FY  ++R ++NIKG   +  DC+ HF C  C L Q+
Sbjct: 59  A------LYMLIDLITSCGRMYACFYSGKMRAQYNIKGDGCT--DCLKHFCCNLCALTQQ 110

Query: 241 SRTLE 245
            R L+
Sbjct: 111 YRELK 115


>AT2G45010.1 | Symbols:  | PLAC8 family protein |
           chr2:18568045-18569615 FORWARD LENGTH=244
          Length = 244

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGSCYIQAAVYFL------LAIGSLI 175
           W   +F C +        +FCPC  FG+N++       + Q  V         +A+ ++ 
Sbjct: 62  WTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVT 121

Query: 176 SFIAFGVTRRNCFLYLALTFIV--SIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACP 233
           +  +  +  +   +     F      G Y G +R  ++KK+++K  ++  D C+ H    
Sbjct: 122 ALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLK--NAPCDHCMVHCCLH 179

Query: 234 CCTLCQESRTLEMNNVQD 251
            C LCQE R ++ N++ D
Sbjct: 180 WCALCQEHREMK-NHLSD 196


>AT2G45010.2 | Symbols:  | PLAC8 family protein |
           chr2:18568782-18569615 FORWARD LENGTH=198
          Length = 198

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 122 WEGDLFDCFDHRRIALESIFCPCYRFGKNMKRAGFGSCYIQAAVYFL------LAIGSLI 175
           W   +F C +        +FCPC  FG+N++       + Q  V         +A+ ++ 
Sbjct: 16  WTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVT 75

Query: 176 SFIAFGVTRRNCFLYLALTFIV--SIGAYLGFYRTRIRKKFNIKGSDSSLDDCVYHFACP 233
           +  +  +  +   +     F      G Y G +R  ++KK+++K  ++  D C+ H    
Sbjct: 76  ALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLK--NAPCDHCMVHCCLH 133

Query: 234 CCTLCQESRTLEMNNVQD 251
            C LCQE R ++ N++ D
Sbjct: 134 WCALCQEHREMK-NHLSD 150