Miyakogusa Predicted Gene
- Lj4g3v0423210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0423210.1 tr|D7KJV7|D7KJV7_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.27,4e-18,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repe,CUFF.47123.1
(375 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 7e-78
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 171 1e-42
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 3e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 7e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 8e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 2e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 122 4e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 121 6e-28
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 2e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 119 4e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 2e-26
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 2e-26
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 116 2e-26
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 8e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 114 8e-26
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 1e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 110 2e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 108 9e-24
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 105 4e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 9e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 103 2e-22
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 103 3e-22
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 102 3e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 101 1e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 100 1e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 100 1e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 2e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 7e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 9e-20
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 94 2e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 9e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 87 1e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 87 1e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 84 1e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 82 4e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 80 3e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 79 6e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 78 9e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 78 1e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 76 4e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 76 5e-14
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 8e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 74 2e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 73 3e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 73 4e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 72 7e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 72 8e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 72 9e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 1e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 70 2e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 70 2e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 68 9e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 67 2e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 3e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 65 6e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 65 9e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 64 2e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 62 6e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 1e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 61 1e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 2e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 60 2e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 60 2e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 59 4e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 58 1e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 57 1e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 56 5e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 51 1e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 49 7e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 9e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 255/345 (73%)
Query: 29 KSLSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQK 88
KSL+ + E N +++V+KFKKAC+ +RFRT +Y+ TVRRL AK+ V +ILE QK
Sbjct: 42 KSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQK 101
Query: 89 QYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
+Y D SKEGF+AR+I+LYGK+GM + A+++F+EMP R+C R+VLSFNALL+AY SK++
Sbjct: 102 KYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFD 161
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
VVE +F E+PG++S+KPD+VSYNT+IKA C+ AV++L+E+E G+ PD++TFNTL
Sbjct: 162 VVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL 221
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
L Y +G+FE GE++W +M KN++ DIR+YNARLLGLA E K+ E V E++ +
Sbjct: 222 LLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGL 281
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
KPD+FS NA+I+G +NEG +DEA+ W+ EI K PDK TFA L+P +C+ GD ++AI+
Sbjct: 282 KPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIE 341
Query: 329 VVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRY 373
+ KE F+ R VG LQ +VD+LV S EA+EIV++ KTN +
Sbjct: 342 LFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDF 386
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 358 bits (918), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 237/330 (71%)
Query: 44 LVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLI 103
+ +KFKKAC + FR +YE TVRRLA AK+F V +ILE Q +Y + SKEGF AR+I
Sbjct: 54 ITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARII 113
Query: 104 TLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISV 163
LYG+ GM + A+++FDEMPERNC RT LSFNALL A ++SK++ +VE IFKE+PG++S+
Sbjct: 114 NLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSI 173
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+PD+ SYNT+IK C F AV++++E+E G+ PD ITFN LL Y +G+FEEGE+
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+W +M KN+ DIRSYNARLLGLA+E K+ E V +++ ++KPD+F+ A+IKGFV
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+EG LDEA W+ EIEK+ P K F +L+P +C+ GDL++A ++ KEIF R V
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 344 LLQLVVDKLVSESMLSEAKEIVELGKTNRY 373
+LQ VVD LV S EA+EIVEL KTN Y
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 287 bits (735), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 216/337 (64%)
Query: 37 KEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKE 96
K L + V+KFK++C+ + FR G+Y +RRL AK+F + ++L++QK++ D E
Sbjct: 63 KNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSE 122
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
F R++ LYG SGM + A ++FDEMPE NC RTV SFNALL+AY++SK+ + FKE
Sbjct: 123 DFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKE 182
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+P ++ + PDLV+YNT+IKA C+ + +S+ EE+EKNG PDLI+FNTLL+ Y
Sbjct: 183 LPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRE 242
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
F EG+++W M KNLSP+IRSYN+R+ GL KK +A+ + M+ + + PD+ + N
Sbjct: 243 LFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYN 302
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
A+I + + NL+E K + E+++ PD T+ L+P LC+KGDL A++V +E
Sbjct: 303 ALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKH 362
Query: 337 RCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRY 373
+ + + VV++L+ + EA ++V+ GK Y
Sbjct: 363 KLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSY 399
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 160/304 (52%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
+EDTV RLAGA + + D+LEHQK +EGF R+I LYGK+GM K+A F M
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMD 133
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
C R+V SFNA L + + + P + + D VS+N IK+FC+ +
Sbjct: 134 LYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGIL 193
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+ A + EMEK+G++PD++T+ TL+ LY R G LW M K P++ ++N R
Sbjct: 194 DGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVR 253
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ L ++ +A + L M K V+PD + N +IKGF D A++ + +
Sbjct: 254 IQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGY 313
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
P+ + T++ +LC+ G+ A + K+ + +++++ LV + L +AK
Sbjct: 314 KPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKS 373
Query: 364 IVEL 367
I+EL
Sbjct: 374 IMEL 377
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 170/315 (53%), Gaps = 6/315 (1%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILE-HQKQYSDFSKEGFSARLITLYGKSG 110
C +DR + V LA K F V ++L+ + D E F+A I LY ++
Sbjct: 76 CRIDRI-----AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQAN 130
Query: 111 MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
M + ++F ++ + +RTV S NALL A L +K Y+ +R++ E+P ++PDL +Y
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N +IK FC+S S+ S++ EME+ G+ P+ +F ++ G YAE + +E K+ M
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
+ ++ + +YN R+ L KK+ EA L M +KP+ + + +I GF NE + +E
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
AKK F + PD + TL+ +LC+ GD +TA+ + KE +++ +V+
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 351 KLVSESMLSEAKEIV 365
L +S + EAKE++
Sbjct: 371 GLAKDSKVEEAKELI 385
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+YN I++ CK K + A ++L+ M G+ P+ +T++ L+ G E FEE +KL+ M
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
+ PD Y + L A+ +E +K+ P + +++ G + +
Sbjct: 319 VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKV 378
Query: 289 DEAKKWFGEIEK 300
+EAK+ G++++
Sbjct: 379 EEAKELIGQVKE 390
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 132/322 (40%), Gaps = 16/322 (4%)
Query: 54 VDRFRTKTGIYEDTVRRLAGAKQFRGVID---ILEHQKQYSDFSKEGFSARLITLYGKSG 110
+ R R+ T ++ R L + Q R + IL + SKE A L +L
Sbjct: 4 LSRIRSSTSLF----RHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAAL-SLLKSEK 58
Query: 111 MPKRARQMFDEMP-ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
P R ++ +C ++F+A + K + V + G I +PDL S
Sbjct: 59 DPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLD---GFIENRPDLKS 115
Query: 170 YNTVIKA---FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
A + ++ + + ++ + ++EK +S + + N LL ++E ++++
Sbjct: 116 ERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYI 175
Query: 227 QMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M + PD+ +YN + + + EME+K +KP+ S +I GF E
Sbjct: 176 EMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAE 235
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL 345
DE K ++ + +T+ + LC++ K A ++ + + +
Sbjct: 236 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 346 QLVVDKLVSESMLSEAKEIVEL 367
++ +E EAK++ ++
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKI 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+KP+ V+Y+ +I FC FE A + + M G PD + TL+ L G FE
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETAL 347
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
L + KN P + + GLA + K EA E + ++++K
Sbjct: 348 SLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 143/256 (55%), Gaps = 4/256 (1%)
Query: 65 EDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
E TVRRLA ++F + ++E K +E F + LI YG++ M A + F++M +
Sbjct: 71 ELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQ 130
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS-VKPDLVSYNTVIKAFCKSKVF 183
R+ +SFNALL A LHSK + V ++F E+P + + PD +SY +IK++C S
Sbjct: 131 YGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTP 190
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
E A+ ++ +M+ G+ I F T+L LY +G E + LW +M K D +YN R
Sbjct: 191 EKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVR 250
Query: 244 LLGLAVEKKTGEAV-EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ ++ +K++ E V E ++EM +KPD S N ++ + G LDEAKK + +E +
Sbjct: 251 I--MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 303 NDPDKNTFATLVPFLC 318
P+ TF TL+ LC
Sbjct: 309 CAPNAATFRTLIFHLC 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
F+ L +LY K G + A +++EM ++ C ++N + + RV E I E
Sbjct: 211 AFTTILSSLY-KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELI--E 267
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ +KPD +SYN ++ A+C+ + + A + E +E N +P+ TF TL+ L
Sbjct: 268 EMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSR 327
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
+E+G ++ + + PD + ++GL KK +A ++ ++KK
Sbjct: 328 LYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 148/270 (54%), Gaps = 8/270 (2%)
Query: 65 EDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
E TV+RLA +++F + ++E K E F + LI YG++ M A +MF+EM +
Sbjct: 71 ELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDK 130
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI-SVKPDLVSYNTVIKAFCKSKVF 183
RTV+SFNALLAA LHS + V ++F E P ++ PD +SY +IK++C S
Sbjct: 131 LGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKP 190
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
E A+ ++ +ME GV +I F T+L LY G +E E LW +M K D YN R
Sbjct: 191 EKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 244 LLGLAVEKKTGEAV-EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
L+ A K++ E V E ++EM +KPD S N ++ + +G + EAKK + +E+
Sbjct: 251 LMNAA--KESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ-- 306
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
P+ TF TL+ LC G + V K+
Sbjct: 307 --PNAATFRTLIFHLCINGLYDQGLTVFKK 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
F+ L +LY K+G+ A ++ EM + C +N L RV E + E
Sbjct: 211 AFTTILGSLY-KNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELM--E 267
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ +KPD VSYN ++ A+C + A + E +E+ P+ TF TL+ L G
Sbjct: 268 EMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCING 323
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
+++G ++ + + PD ++ GL V+ E + + KK P L +
Sbjct: 324 LYDQGLTVFKKSAIVHKIPDFKTCKHLTEGL-VKNNRMEDARGVARIVKKKFPPRLVT 380
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 3/309 (0%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEH--QKQYSDFSKEGFSARLITLYGKSGMPKRARQMFD 120
I+ V LA K F V +L+ Q Q D E F+ R I LYG++ M R+ Q F
Sbjct: 77 IFSVAVVTLAREKHFVAVSQLLDGFIQNQ-PDPKSESFAVRAIILYGRANMLDRSIQTFR 135
Query: 121 EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS 180
+ + RTV S NALL A L +K Y+ R++ E+P ++PDL +YN +I+ C+S
Sbjct: 136 NLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCES 195
Query: 181 KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
S+ S++ EME+ + P +F ++DG Y E +F+E K+ M + + +Y
Sbjct: 196 GSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATY 255
Query: 241 NARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
N + L KK+ EA + + ++P+ + + +I GF +E NLDEA F +
Sbjct: 256 NIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVC 315
Query: 301 SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSE 360
+ PD + TL+ LC+ GD +TA+ + +E +++ +V+ L S S + E
Sbjct: 316 NGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDE 375
Query: 361 AKEIVELGK 369
AKE++ + K
Sbjct: 376 AKELIAVVK 384
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++P+ V+Y+ +I FC + + A+++ E M NG PD + TL+ L G FE
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
L + KN P + GLA K EA E + +++K
Sbjct: 343 ILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 136/251 (54%), Gaps = 1/251 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++ +M + + +V++FN L+ I +++P + +P+ +SYN ++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNPLL 386
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FCK K + A+ LE M G PD++T+NT+L L +G+ E+ ++ Q+ K S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P + +YN + GLA KTG+A++ L EM KD+KPD + ++++ G EG +DEA K+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F E E+ P+ TF +++ LC+ AID + + N C+ ++++ L
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 355 ESMLSEAKEIV 365
E M EA E++
Sbjct: 567 EGMAKEALELL 577
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 133/261 (50%), Gaps = 7/261 (2%)
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
SG K+A ++ D M +R+C V+++ L+ A ++ E+ + PD+V
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGCTPDVV 275
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+YN ++ CK + A+ L +M +G P++IT N +L + + GR+ + EKL M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
K SP + ++N + L + G A++ L++M + +P+ S N ++ GF E +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL--- 345
D A ++ + PD T+ T++ LC+ G ++ A++++ ++ + C +P+L
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC---SPVLITY 452
Query: 346 QLVVDKLVSESMLSEAKEIVE 366
V+D L +A ++++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLD 473
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 127/249 (51%), Gaps = 8/249 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + + G ++A ++ + + V+++N +++ Y + + + +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR----M 198
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SV PD+V+YNT++++ C S + A+ +L+ M + PD+IT+ L++ +
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL +M + +PD+ +YN + G+ E + EA++FL +M +P++ + N I++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G +A+K ++ + P TF L+ FLC KG L AID+++++ C+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 342 A----PLLQ 346
+ PLL
Sbjct: 379 SLSYNPLLH 387
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y +R L + + + +++L+ Q + LI + A ++ DEM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+R CT V+++N L+ + + ++P +P+++++N ++++ C + +
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRW 325
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
A +L +M + G SP ++TFN L++ L +G + +M P+ SYN
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
L G EKK A+E+L+ M + PD+ + N ++ +G +++A + ++
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
P T+ T++ L + G AI ++ E+
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 40/255 (15%)
Query: 84 LEHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
++ +K +D ++GFS ++T + G+ RA + ++MP+ C LS+N L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 138 LAAYLHSKQY-RVVERIFK------------------------------EVPGEISVK-- 164
L + K+ R +E + + E+ ++S K
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 165 -PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
P L++YNTVI K+ A+ +L+EM + PD IT+++L+ GL EG+ +E K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ + + P+ ++N+ +LGL ++T A++FL M + KP+ S +I+G
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 284 NEGNLDEAKKWFGEI 298
EG EA + E+
Sbjct: 566 YEGMAKEALELLNEL 580
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD++ T+I+ FC+ A +LE +E +G PD+IT+N ++ G G +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M ++SPD+ +YN L L K +A+E L M ++D PD+ + +I+
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
+ + A K E+ PD T+ LV +C++G L AI + ++ ++ C+
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 345 LQLVVDKLVSESMLSEAKEIV 365
+++ + S +A++++
Sbjct: 312 HNIILRSMCSTGRWMDAEKLL 332
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V N ++ ++ E LE M +G PD+I TL+ G G+ + K+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ G PD+ +YN + G K GE L +++ V PD+ + N I++ + G
Sbjct: 163 LEGSGAVPDVITYNVMISGYC---KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L +A + + + + PD T+ L+ C + A+ ++ E+ + C +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 348 VVDKLVSESMLSEA 361
+V+ + E L EA
Sbjct: 280 LVNGICKEGRLDEA 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 91 SDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
+ S +G S LIT K+G +A ++ DEM ++ +++++L+ S
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL--S 495
Query: 145 KQYRVVERI--FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
++ +V E I F E + ++P+ V++N+++ CKS+ + A+ L M G P+
Sbjct: 496 REGKVDEAIKFFHEFE-RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
++ L++GL EG +E +L ++ K L
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 156/311 (50%), Gaps = 7/311 (2%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEH 86
S K + + L E N R F A + +Y +RRL+ + V I+E
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVEL 68
Query: 87 QKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPER-NCTRTVLSFNALLAAYLHSK 145
+ E + +I YGK+ MP +A +F M E C + S+N LL A++ +K
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 146 QYRVVERIFK--EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
Q+ VE +F E G V P+L +YN +IK CK K FE A L+ M K G PD+
Sbjct: 129 QWVKVESLFAYFETAG---VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE- 262
+++T+++ L G+ ++ +L+ +M + ++PD+ YN + G EK A+E
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+E V P++ + N +I G G +D+ K + ++++E + D T+++L+ LC+ G+
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 323 LKTAIDVVKEI 333
+ A V E+
Sbjct: 306 VDKAESVFNEL 316
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 7/278 (2%)
Query: 95 KEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
KEGF + +I K+G A ++FDEM ER V +N L+ +L K ++
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
++ + + SV P++ ++N +I K + + + E M++N DL T+++L
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+ GL G ++ E ++ ++ + S D+ +YN L G K E++E + ME K+
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
++ S N +IKG + G +DEA + + DK T+ + LC G + A+
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 329 VVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
V++E+ ++ + ++D L + L EA +V+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
A +I K + A + EM + NAL+ + + +E+ G
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM-G 491
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ +P +VSYN +I CK+ F A + ++EM +NG PDL T++ LL GL + + +
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+LW Q L D+ +N + GL K +A+ + ME ++ +L + N ++
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+GF G+ + A +G + K PD ++ T++ LC
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ + G K + +++ M +N + ++S+N L+ L + + I++ +P +
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAA 392
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D +Y I C + A+ +++E+E +G D+ + +++D L + R EE L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M + + NA + GL + + GEA FL+EM K +P + S N +I G
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL 345
G EA + E+ ++ PD T++ L+ LC + A+++ + + +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 346 QLVVDKLVSESMLSEAKEIV 365
+++ L S L +A ++
Sbjct: 573 NILIHGLCSVGKLDDAMTVM 592
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D+ +Y ++I CK K E A ++++EM K+GV + N L+ GL + R E
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+MG P + SYN + GL K GEA F++EM + KPDL + + ++ G +
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+D A + + + +S + D L+ LC G L A+ V+ + + C
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I+ K G ++++ M + + + ++++L+ + E +F E+ E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD-ER 319
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME-KNGVSPDLITFNTLLDGLYAEGRFEE 220
D+V+YNT++ FC+ + ++ + ME KN V +++++N L+ GL G+ +E
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDE 377
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+W M K + D +Y + GL V +A+ +QE+E D+++ +II
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
+ L+EA E+ K + + + L+ L L A ++E+ CR
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++ L EA V+ N + P
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K+G A EM E + +++ LL ++ + ++ + +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL-QS 563
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ D++ +N +I C + A++++ ME + +L+T+NTL++G + G
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+WG M L PDI SYN + GL + + A+EF + + P +++ N +++
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Query: 282 FVN 284
VN
Sbjct: 684 VVN 686
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 1/194 (0%)
Query: 121 EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS 180
EM + C TV+S+N L+ + ++ KE+ E KPDL +Y+ ++ C+
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML-ENGWKPDLKTYSILLCGLCRD 547
Query: 181 KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ + A+ + + ++G+ D++ N L+ GL + G+ ++ + M +N + ++ +Y
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 241 NARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
N + G + A M K ++PD+ S N I+KG + A ++F +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667
Query: 301 SENDPDKNTFATLV 314
P T+ LV
Sbjct: 668 HGIFPTVYTWNILV 681
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N +I + A L EM KNG P ++++N L+ GL G+F E +M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
PD+++Y+ L GL ++K A+E + + ++ D+ N +I G + G LD+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
A +E + T+ TL+ + GD
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 125/240 (52%), Gaps = 4/240 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI YG +G+ + + ++F M + + +VL+FN+LL+ L + + +F E+
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD ++NT+I FCK+ + + A + ++ME +PD++T+NT++DGL G+ +
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 222 EKLWGQMGGK--NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ M K ++ P++ SY + G ++++ EAV +M + +KP+ + N +I
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 280 KGFVNEGNLDEAKKWF--GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
KG DE K G + PD TF L+ C+ G L A+ V +E+ N +
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM- 228
+N++I+++ + +F+ +V + + M++ G+SP ++TFN+LL L GR L+ +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
++PD ++N + G EA ++ME PD+ + N II G G +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 289 DEAKKWFGEIEKSEND--PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
A + K D P+ ++ TLV C K ++ A+ V ++ + + A
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 347 LVVDKLVSESMLSEAKEIV 365
++ L E K+I+
Sbjct: 321 TLIKGLSEAHRYDEIKDIL 339
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
+FN L+ A+ + ++F+E+ + + PD SY+ +I+ C F+ A ++ E
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLN-MKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Query: 193 M-------EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
+ K+ P +N + + L A G+ ++ EK++ Q+ + + D SY +
Sbjct: 414 LFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLIT 472
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
G E K A E L M +++ PDL + +I G + G A + +S P
Sbjct: 473 GHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP 532
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
TF +++ L ++ + +V + R R L VV L S + +A IV
Sbjct: 533 VATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIV 592
Query: 366 ELGKTNRY 373
L N Y
Sbjct: 593 RLLYDNGY 600
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 137/266 (51%), Gaps = 2/266 (0%)
Query: 102 LITLYGKSGMP-KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
+I GK GM K+ + FDEM ++FN+LLA + +F E+
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
++ D+ SYNT++ A CK + A +L +M + P++++++T++DG GRF+E
Sbjct: 369 -RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
L+G+M ++ D SYN L ++ EA++ L+EM +K D+ + NA++
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G+ +G DE KK F E+++ P+ T++TL+ + G K A+++ +E + R
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVE 366
L ++D L ++ A +++
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLID 573
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + + G+ + AR +FDEM R + V S+N LL A Q + I ++P +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK- 403
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P++VSY+TVI F K+ F+ A+++ EM G++ D +++NTLL GR EE
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +M + D+ +YNA L G + K E + EM+++ V P+L + + +I G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G EA + F E + + D ++ L+ LC+ G + +A+ ++ E+
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
++ +I+ G+ G A+++F+ TV +F+AL++AY S + +F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKV-FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
E ++P+LV+YN VI A K + F+ +EM++NGV PD ITFN+LL G
Sbjct: 295 K-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+E L+ +M + + D+ SYN L + + A E L +M K + P++ S +
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I GF G DEA FGE+ D+ ++ TL+ + G + A+D+++E+
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K+G A +F EM +S+N LL+ Y + I +E+ +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM-ASV 473
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+K D+V+YN ++ + K ++ + EM++ V P+L+T++TL+DG G ++E
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ + L D+ Y+A + L G AV + EM K+ + P++ + N+II
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 282 FVNEGNLDEAKKW 294
F +D + +
Sbjct: 594 FGRSATMDRSADY 606
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 148/312 (47%), Gaps = 2/312 (0%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDIL-EHQKQYSDF-SKEGFSARLITLYGKSGMPKR 114
F Y + +L+ A+ F V ++ + + Y E L+ YG +G +
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 138
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
+ ++F +P+ R+V S N LL + ++++ +V +FK + P++ + N ++
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 198
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
KA CK ESA +L+E+ G+ P+L+T+ T+L G A G E +++ +M +
Sbjct: 199 KALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY 258
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD +Y + G + EA + +MEK +++P+ + +I+ E EA+
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F E+ + PD + ++ LCE + A + +++ C LL ++ L
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 355 ESMLSEAKEIVE 366
E ++EA+++ +
Sbjct: 379 EGRVTEARKLFD 390
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y K G A + D+M + +++ ++ A K+ +F E+ E
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML-ER 325
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S PD VI A C+ + A + +M KN PD +TL+ L EGR E
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL+ + ++ P + +YN + G+ + + EA +M ++ KP+ F+ N +I+G
Sbjct: 386 RKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
GN+ E + E+ + P+K TF L L + G + A+ +V
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 19/242 (7%)
Query: 59 TKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQM 118
T + D +L + V+D +E + + G R + KSG AR M
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG---EARNM 318
Query: 119 FDEMPERN-------CTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
FDEM ER+ C + + +AL + + + ++ K + PD +
Sbjct: 319 FDEMLERSFMPDSSLCCKVI---DALCEDHKVDEACGLWRKMLKN-----NCMPDNALLS 370
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
T+I CK A + +E EK + P L+T+NTL+ G+ +G E +LW M +
Sbjct: 371 TLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P+ +YN + GL+ E V L+EM + P+ + + +G G ++A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 292 KK 293
K
Sbjct: 490 MK 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL--YA-EGRFEEGEKLW 225
+Y++++ +++ F+ S++ ++ +N P N +D L Y GR+E +++
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE--FLQEMEKKDVKPDLFSLNAIIKGFV 283
++ + +RS N LL + ++ + + V F E + P++F+ N ++K
Sbjct: 144 LRIPDFGVKRSVRSLNT-LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 202
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+ +++ A K EI P+ T+ T++ +GD+++A V++E+ + A
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 344 LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++D SEA +++ + N P
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
++++F +LL + + +F ++ G + KP++V YNT+I CKSK ++A+ +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
L MEK+G+ PD++T+N+L+ GL + GR+ + ++ M + + PD+ ++NA +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
E + EA EF +EM ++ + PD+ + + +I G LDEA++ FG + PD T
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
++ L+ C+ ++ + + E+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEM 352
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A MFD+M V+ +N ++ SKQ + + + + PD+V+YN++I
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLI 228
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C S + A M+ M K + PD+ TFN L+D EGR E E+ + +M ++L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PDI +Y+ + GL + + EA E M K PD+ + + +I G+ ++ K
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F E+ + + T+ L+ C G L A ++ + +
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 81 IDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
+D+ H Q +RL++ K ++++M + + N LL
Sbjct: 66 LDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
+ Q + ++ ++ +P +V++ +++ FC+ A+ M ++M G P
Sbjct: 126 FCRCSQLSLALSFLGKMI-KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
+++ +NT++DGL + + L +M + PD+ +YN+ + GL + +A +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
M K+++ PD+F+ NA+I V EG + EA++++ E+ + DPD T++ L+ LC
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC-- 302
Query: 321 GDLKTAIDVVKEIF 334
+ + +D +E+F
Sbjct: 303 --MYSRLDEAEEMF 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
++ F+ LL+A K+Y VV +++++ + + +L + N ++ FC+ A+S
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQ-MLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
L +M K G P ++TF +LL+G R + ++ QM G P++ YN + GL
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
K+ A++ L MEK + PD+ + N++I G + G +A + + K E PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
F L+ ++G + A + +E+ L++ L S L EA+E+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
++ IY + L +KQ +D+L ++ LI+ SG A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+M M +R V +FNAL+ A + + E ++E+ S+ PD+V+Y+ +I
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYG 300
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
C + A M M G PD++T++ L++G + E G KL+ +M + + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+Y + G K A E + M V P++ + N ++ G + G +++A
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+++K+ D D T+ ++ +C+ G++ A D+
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y KS + ++F EM +R R +++ L+ Y + + V E IF+ +
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV-FC 390
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P++++YN ++ C + E A+ +L +M+KNG+ D++T+N ++ G+ G +
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
++ + + L PDI +Y +LGL + EA ++M++ + P+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KS A + + M + V+++N+L++ S ++ R+ + + PD+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR-EIYPDV 256
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++N +I A K A EEM + + PD++T++ L+ GL R +E E+++G
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PD+ +Y+ + G KK ++ EM ++ V + + +I+G+ G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
L+ A++ F + P+ T+ L+ LC+ G ++ A+ ++ ++
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +MF M + C V++++ L+ Y SK+ ++F E+ + V + V+Y +I
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILI 368
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ +C++ A + M GV P++IT+N LL GL G+ E+ + M +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
DI +YN + G+ + +A + + + + PD+++ ++ G +G EA
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 295 FGEIEKSENDPDK 307
F ++++ P++
Sbjct: 489 FRKMKEDGILPNE 501
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 131/249 (52%), Gaps = 8/249 (3%)
Query: 131 VLSFNALLAAYLHSKQ-YRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
VLS+NA+L A + SK+ E +FKE+ E V P++ +YN +I+ FC + + A+++
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEML-ESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
++ME G P+++T+NTL+DG + ++G KL M K L P++ SYN + GL
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
E + E L EM ++ D + N +IKG+ EGN +A E+ + P T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP---LLQLVVDKLVSESMLSEAKEIVE 366
+ +L+ +C+ G++ A++ + ++ R R P +VD + ++EA ++
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQM---RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 367 LGKTNRYHP 375
N + P
Sbjct: 405 EMNDNGFSP 413
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G +A M EM T +V+++ +L+ + + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR- 374
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P+ +Y T++ F + A +L EM NG SP ++T+N L++G G+ E+
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ M K LSPD+ SY+ L G EA+ +EM +K +KPD + +++I+G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F + EA + E+ + PD+ T+ L+ C +GDL+ A+ + E+
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 342 APLLQLVVDKLVSESMLSEAKEIV 365
++++ L +S EAK ++
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLL 578
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 5/234 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + +G A +FD+M + C V+++N L+ Y + R ++ FK +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC---KLRKIDDGFKLLRSMA 267
Query: 162 --SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++P+L+SYN VI C+ + +L EM + G S D +T+NTL+ G EG F
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ + +M L+P + +Y + + + A+EFL +M + + P+ + ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
GF +G ++EA + E+ + P T+ L+ C G ++ AI V++++
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 131/257 (50%), Gaps = 9/257 (3%)
Query: 86 HQK--QYSDFSKEGFSARLITLYG------KSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
HQ +++ + G + +IT K+G RA + D+M R ++ L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 138 LAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG 197
+ + R+ +E+ + P +V+YN +I C + E A+++LE+M++ G
Sbjct: 387 VDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV 257
+SPD+++++T+L G +E ++ +M K + PD +Y++ + G +++T EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 258 EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ +EM + + PD F+ A+I + EG+L++A + E+ + PD T++ L+ L
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 318 CEKGDLKTAIDVVKEIF 334
++ + A ++ ++F
Sbjct: 566 NKQSRTREAKRLLLKLF 582
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y + + A ++ L+ + E L+ + + G A ++ EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+ + +V+++NAL+ + + + + +++ E + PD+VSY+TV+ FC+S
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+ A+ + EM + G+ PD IT+++L+ G + R +E L+ +M L PD +Y A
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ +E +A++ EM +K V PD+ + + +I G + EAK+ ++ E+
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVK 331
P T+ TL+ C + K+ + ++K
Sbjct: 587 VPSDVTYHTLIEN-CSNIEFKSVVSLIK 613
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 143/295 (48%), Gaps = 22/295 (7%)
Query: 92 DFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
+ + GFS ++T + +G + A + ++M E+ + V+S++ +L+ + S
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
R+ +E+ E +KPD ++Y+++I+ FC+ + + A + EEM + G+ PD T+
Sbjct: 465 DVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
L++ EG E+ +L +M K + PD+ +Y+ + GL + +T EA L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 266 KDVKP---------------DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
++ P + S+ ++IKGF +G + EA + F + + PD +
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
++ C GD++ A + KE+ + + + +V L E ++E ++
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL--------YAEGRFEE- 220
++ V+K++ + + + A+S++ + +G P ++++N +LD +AE F+E
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 221 ---------------------------GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
L+ +M K P++ +YN + G +K
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+ + L+ M K ++P+L S N +I G EG + E E+ + D+ T+ TL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 314 VPFLCEKGDLKTAIDVVKEIF 334
+ C++G+ A+ + E+
Sbjct: 317 IKGYCKEGNFHQALVMHAEML 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 36/317 (11%)
Query: 29 KSLSQDLYKEVNLRKLVDKFKKACDVD------RFRTKTGIYEDTVRRLAGAKQF----- 77
K LS D+ V+ ++ F ++ DVD R + GI DT+ + + F
Sbjct: 444 KGLSPDV---VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 78 -RGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNA 136
+ D+ E + E LI Y G ++A Q+ +EM E+ V++++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 137 LLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN 196
L+ + R +R+ ++ E SV D V+Y+T+I+ C + F+S VS
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSD-VTYHTLIEN-CSNIEFKSVVS-------- 610
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
L+ G +G E ++++ M GKN PD +YN + G +A
Sbjct: 611 -----------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
+EM K ++ A++K EG ++E + +S + LV
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 317 LCEKGDLKTAIDVVKEI 333
+G++ +DV+ E+
Sbjct: 720 NHREGNMDVVLDVLAEM 736
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 68 VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNC 127
V RL A +F+ D++ K + E + YG+ P + ++F +M + +C
Sbjct: 58 VLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC 117
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK-VFESA 186
+ ++ +LA + Q + + +K + EI + P + S N +IKA C++ ++
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ + EM K G PD T+ TL+ GL GR +E +KL+ +M K+ +P + +Y + + G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L K EA+ +L+EM+ K ++P++F+ ++++ G +G +A + F + P+
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
T+ TL+ LC++ ++ A++++ + + A L V+ + S EA ++
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++F EMP+R C ++ L++ + +++F E+ E P +V+Y ++I
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV-EKDCAPTVVTYTSLING 236
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
C SK + A+ LEEM+ G+ P++ T+++L+DGL +GR + +L+ M + P+
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+ +Y + GL E+K EAVE L M + +KPD +I GF EA +
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 297 EIEKSENDPDK-----------------------------------------NTFATLVP 315
E+ P++ T +LV
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 316 FLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
LC+KG+ + A+ +V EI C +L++ + ++++ EA +
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASD 464
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+++ +M + P ++Y L L E + A +F + M + + P + SLN +IK
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 283 V-NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
N+G +D K F E+ K DPD T+ TL+ LC G + A + E+ C
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++ L + EA +E K+ P
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A +++D+M +R+ + ++N+L+ + + +++F+ + +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK- 394
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+V+YNT+IK FCKSK E + EM G+ D +T+ TL+ GL+ +G +
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+K++ QM + PDI +Y+ L GL K +A+E M+K ++K D++ +I+G
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G +D+ F + P+ T+ T++ LC K L+ A ++K++
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 95 KEGFSARLITLYGK--SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
+ G L+T YG +G+ KR A + ++M V+ FN ++ + +
Sbjct: 218 QRGCQPNLVT-YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+FKE+ + ++P++V+Y+++I C + A +L +M + ++P+L+TFN
Sbjct: 277 DDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+D EG+F E EKL+ M +++ PDI +YN+ + G + + +A + + M KD
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
PD+ + N +IKGF +++ + F E+ D T+ TL+ L GD A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
V K++ + +++D L + L +A E+ +
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL Y A + D+M E ++F L+ +LH+K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V + + V + +P+LV+Y V+ CK + A+++L +ME + D++ FNT
Sbjct: 208 EAVALVDRMV--QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++D L ++ L+ +M K + P++ +Y++ + L + +A + L +M +K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ P+L + NA+I FV EG EA+K + ++ K DPD T+ +LV C + +
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC----MHDRL 381
Query: 328 DVVKEIF 334
D K++F
Sbjct: 382 DKAKQMF 388
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 16/316 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C R+ + + D + + F +ID +E +K Y D K +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
T L M R A+QMF+ M ++C V+++N L+ + SK+ +F+E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + D V+Y T+I+ ++A + ++M +GV PD++T++ LLDGL G
Sbjct: 426 MSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E+ +++ M + DI Y + G+ K + + + K VKP++ + N
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
+I G ++ L EA ++++ P+ T+ TL+ GD + ++++E+ +
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Query: 337 RCRVGAPLLQLVVDKL 352
R A + LV + L
Sbjct: 605 RFVGDASTIGLVANML 620
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
++N L+ + Q + + ++ ++ +P +V+ ++++ +C K AV+++++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M + G PD ITF TL+ GL+ + E L +M + P++ +Y + GL
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
T A+ L +ME ++ D+ N II ++D+A F E+E P+ T+++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
L+ LC G A ++ ++ + ++D V E EA+++ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 134/294 (45%), Gaps = 19/294 (6%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFR--------GVIDILEHQKQY 90
V L+D F K +F +Y+D ++R F + D L+ KQ
Sbjct: 331 VTFNALIDAFVKE---GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 91 SDF--SKEGFS-----ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+F SK+ F LI + KS + ++F EM R +++ L+ H
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+++FK++ + V PD+++Y+ ++ C + E A+ + + M+K+ + D+
Sbjct: 448 DGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
+ T+++G+ G+ ++G L+ + K + P++ +YN + GL ++ EA L++M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
++ P+ + N +I+ + +G+ + + E+ D +T + L
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 109/261 (41%), Gaps = 36/261 (13%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F M + +++ FN LL+A K++ VV + +++ + + L +YN +I
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ-RLEIVHGLYTYNILI 127
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G P ++T ++LL+G R + L QM
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD ++ + GL + K EAV + M ++ +P+L + ++ G
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG------------- 234
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
LC++GD A++++ ++ + + ++D L
Sbjct: 235 ----------------------LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 355 ESMLSEAKEIVELGKTNRYHP 375
+ +A + + +T P
Sbjct: 273 YRHVDDALNLFKEMETKGIRP 293
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 71 LAGAKQFRGVIDILEHQKQYSDFSKEGFSARLI-TLYGKSGMPKRARQMFDEMPERNCTR 129
+A K+F VI++ +H Q S + ++ L+ + +S P A +M +
Sbjct: 82 IAKMKKFDVVINLCDHL-QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
+++F +L+ + + + ++ E+ +KPD+V Y T+I + CK+ A+S+
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
++ME G+ PD++ + +L++GL GR+ + + L M + + PD+ ++NA +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
E K +A E EM + + P++F+ ++I GF EG +DEA++ F +E PD
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ +L+ C+ + A+ + E+
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEM 343
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G A +FD+M V+ + +L+ +S ++R + + + + +KPD+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDV 247
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+++N +I AF K F A + EM + ++P++ T+ +L++G EG +E +++
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PD+ +Y + + G KK +A++ EM +K + + + +I+GF G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ A++ F + P+ T+ L+ LC G +K A+ + +++
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 120/231 (51%), Gaps = 4/231 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A ++++EM + + ++ +L+ + ++F + +
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK- 311
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+V+Y ++I FCK K + A+ + EM + G++ + IT+ TL+ G G+
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD---VKPDLFSLNAI 278
++++ M + + P+IR+YN L L K +A+ ++M+K++ V P++++ N +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+ G G L++A F ++ K E D T+ ++ +C+ G +K A+++
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
R ++ +L LHS Q+ +F + E P ++ + ++ K K F+ +
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMV-ESRPLPSIIDFTKLLNVIAKMKKFDVVI 92
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
++ + ++ GVS DL T N L++ + G+M PDI ++ + + G
Sbjct: 93 NLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF 152
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
+ + EA+ + +M + +KPD+ II G+++ A F ++E PD
Sbjct: 153 CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ +LV LC G + A +++ + + + ++D V E +A+E+
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K A ++F EM ++ T +++ L+ + + V + +F +
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR- 381
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK---NGVSPDLITFNTLLDGLYAEGRF 218
V P++ +YN ++ C + + A+ + E+M+K +GV+P++ T+N LL GL G+
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E+ ++ M + + I +Y + G+ K AV + K VKP++ + +
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Query: 279 IKGFVNEGNLDEAKKWF 295
I G EG EA F
Sbjct: 502 ISGLFREGLKHEAHVLF 518
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 14/218 (6%)
Query: 62 GIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKRA 115
G + D V + F + + K + + S++G + IT +G+ G P A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF-----KEVPGEISVKPDLVSY 170
+++F M R + ++N LL ++ + + IF +E+ G V P++ +Y
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG---VAPNIWTY 428
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N ++ C + E A+ + E+M K + +IT+ ++ G+ G+ + L+ +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
K + P++ +Y + GL E EA ++M++ V
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 88/206 (42%), Gaps = 1/206 (0%)
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
+Y +++ S F A+ + M ++ P +I F LL+ + +F+ L
Sbjct: 37 FCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+ +S D+ + N + + A FL +M K +PD+ + ++I GF
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
++EA ++ + PD + T++ LC+ G + A+ + ++ N R +
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 347 LVVDKLVSESMLSEAKEIVELGKTNR 372
+V+ L + +A ++ G T R
Sbjct: 217 SLVNGLCNSGRWRDADSLLR-GMTKR 241
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 155/333 (46%)
Query: 34 DLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDF 93
+L + N KLV+ V + + ++ L A Q R I +LE Y
Sbjct: 162 NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221
Query: 94 SKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI 153
E ++ Y + G A ++ ++M E C+ + +S N ++ + +
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
+E+ + PD ++NT++ CK+ + A+ +++ M + G PD+ T+N+++ GL
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
G +E ++ QM ++ SP+ +YN + L E + EA E + + K + PD+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ N++I+G N A + F E+ +PD+ T+ L+ LC KG L A++++K++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ C ++D + EA+EI +
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEH 86
S+ + KE + ++ ++ + D F + V L A + I+I++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 87 QKQYSDFSKEGFSA------RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
Q EG+ +I+ K G K A ++ D+M R+C+ +++N L++
Sbjct: 321 MLQ------EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
Q + + + + + PD+ ++N++I+ C ++ A+ + EEM G P
Sbjct: 375 LCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
D T+N L+D L ++G+ +E + QM + + +YN + G KT EA E
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
EME V + + N +I G +++A + ++ PDK T+ +L+ C
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 321 GDLKTAIDVVKEIFNTRC 338
GD+K A D+V+ + + C
Sbjct: 554 GDIKKAADIVQAMTSNGC 571
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 7/324 (2%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL-- 105
F A F + +YE+ + RL + F + ILE K S + G S LI +
Sbjct: 70 FNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK--SSRCEMGTSTFLILIES 127
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSF-NALLAAYLHSKQYRVVERIFKEVPGEISVK 164
Y + + + D M + + F N +L + ++VE I +K
Sbjct: 128 YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE-ISHAKMSVWGIK 186
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+ ++N +IKA C++ A+ MLE+M G+ PD TF T++ G EG + ++
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-VKPDLFSLNAIIKGFV 283
QM S S N + G E + +A+ F+QEM +D PD ++ N ++ G
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
G++ A + + + DPD T+ +++ LC+ G++K A++V+ ++ C
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 344 LLQLVVDKLVSESMLSEAKEIVEL 367
++ L E+ + EA E+ +
Sbjct: 367 TYNTLISTLCKENQVEEATELARV 390
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ K + A ++ + + V +FN+L+ ++ +RV +F+E+ +
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK- 429
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+PD +YN +I + C + A++ML++ME +G + +IT+NTL+DG + E
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+++ +M +S + +YN + GL ++ +A + + +M + KPD ++ N+++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F G++ +A + + +PD T+ TL+ LC+ G ++ A +++ I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 17/268 (6%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFK----KACDVDRFRTKTGIYEDTVRRLAGAKQFRGVID 82
+ SL Q L N R ++ F+ K C+ D F Y + L + ++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF-----TYNMLIDSLCSKGKLDEALN 456
Query: 83 ILEHQKQYSDFSKEGFSAR-LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
+L+ Q + S ++ + LI + K+ + A ++FDEM +R +++N L+
Sbjct: 457 MLK-QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
S++ ++ ++ E KPD +YN+++ FC+ + A +++ M NG PD
Sbjct: 516 CKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWG--QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
++T+ TL+ GL GR E KL QM G NL+P +YN + GL ++KT EA+
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP--HAYNPVIQGLFRKRKTTEAINL 632
Query: 260 LQEM-EKKDVKPDLFSLNAIIKGFVNEG 286
+EM E+ + PD S + +G N G
Sbjct: 633 FREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 12/231 (5%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R+F + + P+ Y ++ +S F+ +LE+M+ + TF L++
Sbjct: 68 RLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES 127
Query: 212 LYAEGRFEEGEKL-----WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ-EMEK 265
YA+ FE +++ W + L PD YN R+L L V+ + + VE +M
Sbjct: 128 -YAQ--FELQDEILSVVDW-MIDEFGLKPDTHFYN-RMLNLLVDGNSLKLVEISHAKMSV 182
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+KPD+ + N +IK L A ++ PD+ TF T++ E+GDL
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 326 AIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV-ELGKTNRYHP 375
A+ + +++ C + ++V E + +A + E+ + + P
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR------LITLYGKSGMPKRAR 116
+++ +R A++ R E + ++ +GF+ LI + G + A
Sbjct: 167 VFDLLIRTYVQARKLR------EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++ E+ V + N ++ A + V +V E V PD+V+YNT+I A
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ-EKGVYPDIVTYNTLISA 279
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
+ + E A ++ M G SP + T+NT+++GL G++E ++++ +M LSPD
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+Y + L+ + E + +M +DV PDL ++++ F GNLD+A +F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSES 356
++++ PD + L+ C KG + A+++ E+ C + ++ L
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 357 MLSEAKEI 364
ML EA ++
Sbjct: 460 MLGEADKL 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y + GM A + +EM ++ C V+++N +L K +++F E+ E
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-ER 474
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ PD + +I CK ++A+ + ++M++ + D++T+NTLLDG G +
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++W M K + P SY+ + L + EA EM K++KP + N++IKG
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ GN + + + ++ PD ++ TL+ + ++ A +VK++
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G ++F +M R+ ++ F+++++ + S F V E + PD
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK-EAGLIPDN 410
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V Y +I+ +C+ + A+++ EM + G + D++T+NT+L GL E +KL+ +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + L PD + + G A+E Q+M++K ++ D+ + N ++ GF G+
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+D AK+ + ++ E P +++ LV LC KG L A V E+ +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 11/308 (3%)
Query: 62 GIYEDTV--RRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPK 113
G+Y D V L A +G+++ E + + +GFS + T K G +
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLME--EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 114 RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
RA+++F EM + ++ +LL E++F ++ V PDLV ++++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSM 381
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
+ F +S + A+ +++ G+ PD + + L+ G +G L +M +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
+ D+ +YN L GL K GEA + EM ++ + PD ++L +I G GNL A +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
F ++++ D T+ TL+ + GD+ TA ++ ++ + ++V+ L
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 354 SESMLSEA 361
S+ L+EA
Sbjct: 562 SKGHLAEA 569
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ +GK G A++++ +M + T +S++ L+ A R++ E+ +
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK- 579
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++KP ++ N++IK +C+S S LE+M G PD I++NTL+ G E +
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 222 EKLWGQM----GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
L +M GG L PD+ +YN+ L G + + EA L++M ++ V PD +
Sbjct: 640 FGLVKKMEEEQGG--LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+I GFV++ NL EA + E+ + PD
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 113/235 (48%), Gaps = 3/235 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G + A ++F +M E+ V+++N LL + + I+ ++ +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK- 544
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P +SY+ ++ A C A + +EM + P ++ N+++ G G +G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD--VKPDLFSLNAII 279
E +M + PD SYN + G E+ +A +++ME++ + PD+F+ N+I+
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
GF + + EA+ ++ + +PD++T+ ++ + +L A + E+
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE-ISVKPDLVSYNTVIKAFCKSKVFE 184
NC F+ L+ Y+ +++ R F + + +V D + N +I + + E
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID--ACNALIGSLVRIGWVE 217
Query: 185 SAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
A + +E+ ++GV ++ T N +++ L +G+ E+ Q+ K + PDI +YN +
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
+ + EA E + M K P +++ N +I G G + AK+ F E+ +S
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 305 PDKNTFATLVPFLCEKGDL 323
PD T+ +L+ C+KGD+
Sbjct: 338 PDSTTYRSLLMEACKKGDV 356
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ Y G+ + A ++ + MP + + V ++N ++ +Y + +F E+
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS- 334
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD +Y +++ CK + +M V PDL+ F++++ G ++
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + L PD Y + G + A+ EM ++ D+ + N I+ G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
L EA K F E+ + PD T L+ C+ G+L+ A+++ +++ R R+
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 342 APLLQLVVDKLVSESMLSEAKEI 364
++D + AKEI
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEI 537
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF 98
V L+D F K D+D T I+ D V + +IL YS
Sbjct: 516 VTYNTLLDGFGKVGDID---TAKEIWADMVSK-----------EILPTPISYSI------ 555
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
L+ G A +++DEM +N TV+ N+++ Y S E +++
Sbjct: 556 ---LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME--KNGVSPDLITFNTLLDGLYAEG 216
E V PD +SYNT+I F + + A ++++ME + G+ PD+ T+N++L G +
Sbjct: 613 SEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
+ +E E + +M + ++PD +Y + G + EA EM ++ PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 144/278 (51%), Gaps = 7/278 (2%)
Query: 90 YSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+++ +GF A +IT + +G ++ +M +R + V++F+ L+ +++
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+ R +++ KE+ + + P+ ++YN++I FCK E A+ M++ M G PD++
Sbjct: 346 EGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
TFN L++G R ++G +L+ +M + + + +YN + G K A + QEM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
+ V+PD+ S ++ G + G L++A + FG+IEKS+ + D + ++ +C +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 324 KTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
A D+ + ++ A +++ +L + LS+A
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 136/257 (52%), Gaps = 1/257 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A +F+EM + ++++N L+ + ++ ++ ++ +++ + P++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNV 333
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+++ +I +F K A +L+EM + G++P+ IT+N+L+DG E R EE ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PDI ++N + G + + +E +EM + V + + N +++GF G
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+ AKK F E+ PD ++ L+ LC+ G+L+ A+++ +I ++ + + +
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 348 VVDKLVSESMLSEAKEI 364
++ + + S + +A ++
Sbjct: 514 IIHGMCNASKVDDAWDL 530
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 3/264 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + KSG A ++ +M ERN + ++ ++ +F E+ EI
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM--EI 291
Query: 162 -SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
K D+++YNT+I FC + ++ +L +M K +SP+++TF+ L+D EG+ E
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
++L +M + ++P+ +YN+ + G E + EA++ + M K PD+ + N +I
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G+ +D+ + F E+ + T+ TLV C+ G L+ A + +E+ + R R
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 341 GAPLLQLVVDKLVSESMLSEAKEI 364
++++D L L +A EI
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEI 495
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 35/315 (11%)
Query: 87 QKQYSDFSKEGFSARLITLYGKSGM-PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
++ +S FS S R G G+ A +F +M + TV+ FN L +A +K
Sbjct: 43 ERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK 102
Query: 146 QYRVVERIFKEVPGE----------------------------------ISVKPDLVSYN 171
QY +V + K++ + + +PD V +N
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
T++ C A+ +++ M + G P LIT NTL++GL G+ + L +M
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P+ +Y L + +T A+E L++ME++++K D + II G +G+LD A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 292 KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDK 351
F E+E D T+ TL+ C G +++++ + +++D
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 352 LVSESMLSEAKEIVE 366
V E L EA ++++
Sbjct: 343 FVKEGKLREADQLLK 357
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K + A QM D M + C +++FN L+ Y + + +F+E+
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR- 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V + V+YNT+++ FC+S E A + +EM V PD++++ LLDGL G E+
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++G++ + DI Y + G+ K +A + + K VK D + N +I
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ +L +A F ++ + + PD+ T+ L+ D TA ++++E+ ++
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Query: 342 APLLQLVVDKLVS 354
+++V++ L S
Sbjct: 613 VSTVKMVINMLSS 625
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAY-LHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
A ++ D M E T+++ N L+ L+ K V I + V E +P+ V+Y V
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV--ETGFQPNEVTYGPV 234
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
+ CKS A+ +L +ME+ + D + ++ ++DGL +G + L+ +M K
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
DI +YN + G + + + L++M K+ + P++ + + +I FV EG L EA +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
E+ + P+ T+ +L+ C++ L+ AI +V + + C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 3/243 (1%)
Query: 134 FNALLAAY-LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
FN LL L + +E + + V E+ KP L++ NT++ C + AV +++
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMV--EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M + G P+ +T+ +L+ + G+ +L +M +N+ D Y+ + GL +
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
A EME K K D+ + N +I GF N G D+ K ++ K + P+ TF+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNR 372
L+ ++G L+ A ++KE+ ++D E+ L EA ++V+L +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 373 YHP 375
P
Sbjct: 399 CDP 401
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 5/255 (1%)
Query: 82 DILEHQKQYSDFSKEGFSARLITLY---GKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
D++E K Y LI Y G +G +A + EM E + + + +FN L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
+ ++FKE+ + VKP+++SYN++I C A+SM ++M GV
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
P+LIT+N L++G +E ++G + G+ P R YN + K +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+EME++ + PD+ + N +I G GN++ AKK F ++ S+ PD TF L+ C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT-SKGLPDLVTFHILMEGYC 481
Query: 319 EKGDLKTAIDVVKEI 333
KG+ + A ++KE+
Sbjct: 482 RKGESRKAAMLLKEM 496
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 3/234 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI G A M D+M ++++NAL+ + + + +F V G+
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+V P YN +I A+CK + ++ EEME+ G+ PD+ T+N L+ GL G E
Sbjct: 397 AV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+KL+ Q+ K L PD+ +++ + G + ++ +A L+EM K +KP + N ++KG
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 282 FVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+ EGNL A ++EK + ++ L+ +KG L+ A ++ E+
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
+ LS L+ A L + VE ++KE+ ++P++ ++N VI A CK+ A +
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 190 LEEMEKNGVSPDLITFNTLLDG---LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+E+M+ G SP+++++NTL+DG L G+ + + + +M ++SP++ ++N + G
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ +++ +EM +DVKP++ S N++I G N G + EA ++ + P+
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEI 333
T+ L+ C+ LK A+D+ +
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSV 392
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G + +EM V ++N L+A + +++F ++ +
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK- 465
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PDLV+++ +++ +C+ A +L+EM K G+ P +T+N ++ G EG +
Sbjct: 466 -GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 222 EKLWGQM-GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ QM + L ++ SYN L G + + K +A L EM +K + P+ + + +
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 281 GFVNEG 286
V++G
Sbjct: 585 EMVDQG 590
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 39/329 (11%)
Query: 85 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
EH + S + F+ + L G G ++A ++ M C ++++N L+ + S
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP---- 200
+ +FK+V PD+V+Y ++I +CK+ A S+L++M + G+ P
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 201 -------------------------------DLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
D++TF +L+DG G+ +G +LW +M
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ + P+ +Y+ + L E + +A E L ++ KD+ P F N +I GF G ++
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
EA E+EK + PDK TF L+ C KG + A+ + ++ C + ++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 350 DKLVSESMLSEA---KEIVELGKTNRYHP 375
L+ M EA +I G++N P
Sbjct: 495 SCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G+ A QMF+ M + L++++ + + + V+
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ---SFEVEGCC 171
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+ N+++ K E A+ + +E + D TFN L+ GL G+ E+ +L G
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV-KPDLFSLNAIIKGFVNEG 286
M G PDI +YN + G + +A E ++++ V PD+ + ++I G+ G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ EA ++ + P TF LV + G++ TA ++ ++ + C
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD------------------ 201
+++++ +YN + ++ CK+ + + A M E M+ +GVSP+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 202 ---------------LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ N+LL+ L R E+ KL+ + D +++N + G
Sbjct: 156 FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK-SENDP 305
L K +A+E L M +PD+ + N +I+GF L++A + F +++ S P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
D T+ +++ C+ G ++ A ++ ++ ++VD + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 39/329 (11%)
Query: 85 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
EH + S + F+ + L G G ++A ++ M C ++++N L+ + S
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP---- 200
+ +FK+V PD+V+Y ++I +CK+ A S+L++M + G+ P
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 201 -------------------------------DLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
D++TF +L+DG G+ +G +LW +M
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ + P+ +Y+ + L E + +A E L ++ KD+ P F N +I GF G ++
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
EA E+EK + PDK TF L+ C KG + A+ + ++ C + ++
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 350 DKLVSESMLSEA---KEIVELGKTNRYHP 375
L+ M EA +I G++N P
Sbjct: 495 SCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G+ A QMF+ M + L++++ + + + V+
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ---SFEVEGCC 171
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+ N+++ K E A+ + +E + D TFN L+ GL G+ E+ +L G
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV-KPDLFSLNAIIKGFVNEG 286
M G PDI +YN + G + +A E ++++ V PD+ + ++I G+ G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ EA ++ + P TF LV + G++ TA ++ ++ + C
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD------------------ 201
+++++ +YN + ++ CK+ + + A M E M+ +GVSP+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 202 ---------------LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ N+LL+ L R E+ KL+ + D +++N + G
Sbjct: 156 FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK-SENDP 305
L K +A+E L M +PD+ + N +I+GF L++A + F +++ S P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
D T+ +++ C+ G ++ A ++ ++ ++VD + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 142/289 (49%), Gaps = 14/289 (4%)
Query: 77 FRGVIDI-------LEHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMP 123
F +ID+ LE ++ Y++ G + IT + K A QMFD M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+ C +++++ L+ +Y +K+ R+F+E+ + + P+ ++YNT++ FC+S
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKL 436
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+A + +EM GV P ++T+ LLDGL G + +++ +M ++ I YN
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ G+ K +A + K VKPD+ + N +I G +G+L EA F ++++
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
PD T+ L+ L +++++++E+ + +++V+D L
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 129/254 (50%), Gaps = 1/254 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A +F+EM + V+++++L+ + ++ ++ +E+ G ++ PD+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDV 315
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+++ +I F K A + EM G++PD IT+N+L+DG E E +++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PDI +Y+ + K+ + + +E+ K + P+ + N ++ GF G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+ AK+ F E+ P T+ L+ LC+ G+L A+++ +++ +R +G + +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 348 VVDKLVSESMLSEA 361
++ + + S + +A
Sbjct: 496 IIHGMCNASKVDDA 509
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KSG A +F +M ERN +V+ ++ ++ + + +F E+ + +K D+
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADV 280
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+Y+++I C ++ ML EM + PD++TF+ L+D EG+ E ++L+ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + ++PD +YN+ + G E EA + M K +PD+ + + +I +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP---- 343
+D+ + F EI P+ T+ TLV C+ G L A KE+F G P
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA----KELFQEMVSRGVPPSVV 456
Query: 344 LLQLVVDKLVSESMLSEAKEIVE 366
+++D L L++A EI E
Sbjct: 457 TYGILLDGLCDNGELNKALEIFE 479
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 79 GVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
++D + KQ D + LI G A + D M E +++ +L
Sbjct: 161 ALVDRMVEMKQRPDLVT---VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
S + +F+++ E ++K +V Y+ VI + CK F+ A+S+ EME G+
Sbjct: 218 NRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
D++T+++L+ GL +G++++G K+ +M G+N+ PD+ +++A + E K EA E
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
EM + + PD + N++I GF E L EA + F + +PD T++ L+ C
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 319 EKGDLKTAIDVVKEI 333
+ + + + +EI
Sbjct: 397 KAKRVDDGMRLFREI 411
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 34/284 (11%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK--EVPG------------- 159
A +F+ M + T + FN L +A +KQY +V K E+ G
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 160 -------------------EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
++ +PD ++++T++ FC AV++++ M + P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
DL+T +TL++GL +GR E L +M PD +Y L L + A++
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++ME++++K + + +I +G+ D+A F E+E D T+++L+ LC
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
G +++E+ ++D V E L EAKE+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ +PDLV+ +T+I C A+ +++ M + G PD +T+ +L+ L G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
L+ +M +N+ + Y+ + L + +A+ EME K +K D+ + +++I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G N+G D+ K E+ PD TF+ L+ ++G L A KE++N
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA----KELYNEMIT 343
Query: 340 VG-AP---LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
G AP ++D E+ L EA ++ +L + P
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 39/352 (11%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
FR Y + +LA ++ F V IL + + +E LI YGK+G +A
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 117 QMFDEMPERNCTRTV-----------------------------------LSFNALLAAY 141
+F ++ +C RT+ +SFN L+ +
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
L + ++F E+ E+ V+P +V+YN++I C++ A S+LE+M K + P+
Sbjct: 197 LDKCDWEAACKVFDEML-EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPN 255
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
+TF L+ GL +G + E +KL M + P + +Y + L + EA L
Sbjct: 256 AVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLG 315
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
EM+K+ +KPD+ N ++ E + EA + E++ P+ T+ ++ C
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIE 375
Query: 322 DLKTAIDVVKEIFNTR-CRVGAPLLQLVVDKLVSESMLSEAKEIVE-LGKTN 371
D + ++V+ + +R C A + +V L+ L A ++E +GK N
Sbjct: 376 DFDSGLNVLNAMLASRHCPTPATFVCMVAG-LIKGGNLDHACFVLEVMGKKN 426
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P+ A +F + E S+++L+ S+ + V++I + V +V+ +
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFM 120
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+I+ + K+ + A+ + ++ + + NTL++ L G E+ + +
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
L P+ S+N + G + A + EM + +V+P + + N++I ++ +A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 292 KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDK 351
K ++ K P+ TF L+ LC KG+ A ++ ++ C+ G +++
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 352 LVSESMLSEAKEIVELGKTNRYHP 375
L + EAK ++ K R P
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKP 324
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
S ++ K G A+ +F EM E+ VL++N ++ ++ HS ++ +++ + +
Sbjct: 12 ISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHM 71
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E + PD+V+++ +I AF K + A + +EM + + P IT+N+++DG + R
Sbjct: 72 I-EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
++ +++ M K SPD+ +++ + G K+ +E EM ++ + + +
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I GF G+LD A+ E+ PD TF ++ LC K +L+ A +++++
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 113/225 (50%), Gaps = 2/225 (0%)
Query: 151 ERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
+ +F E+ E + P++++YN +I +FC S + A +L M + ++PD++TF+ L++
Sbjct: 30 QNLFTEMH-EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
E + E E+++ +M ++ P +YN+ + G + + +A L M K P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
D+ + + +I G+ +D + F E+ + + T+ TL+ C+ GDL A D++
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 331 KEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE-LGKTNRYH 374
E+ + ++ L S+ L +A I+E L K+ +H
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHH 253
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 92/175 (52%)
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
G+ +K D+V ++ CK +A ++ EM + G+ P+++T+N ++D GR+
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+ ++L M K ++PDI +++A + E+K EA E +EM + + P + N++
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
I GF + +D+AK+ + PD TF+TL+ C+ + +++ E+
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 66/128 (51%)
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M ++ + D++ ++D L +G + L+ +M K + P++ +YN + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+A + L+ M +K + PD+ + +A+I FV E + EA++ + E+ + P T+ +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 313 LVPFLCEK 320
++ C++
Sbjct: 121 MIDGFCKQ 128
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++ +++ NC TV+++ L+ A + ++ E+ +KPD+ +YNT+I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLKPDMFTYNTII 270
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ CK + + A M+ +E G PD+I++N LL L +G++EEGEKL +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +Y+ + L + K EA+ L+ M++K + PD +S + +I F EG LD A ++
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ PD + T++ LC+ G A+++ ++ C
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 34/291 (11%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY----RVVERIFKE------- 156
K GM RA +M + + C V+S+N LL A L+ ++ +++ ++F E
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 157 -----------------------VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+ E + PD SY+ +I AFC+ + A+ LE M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
+G PD++ +NT+L L G+ ++ +++G++G SP+ SYN L
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
A+ + EM + PD + N++I EG +DEA + ++ E P T+ +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 314 VPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ C+ ++ AI+V++ + CR ++++ + +EA E+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+PD+ +YN +I FCK + A +L+ M SPD +T+N ++ L + G+ + K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ Q+ N P + +Y + +E EA++ + EM + +KPD+F+ N II+G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
EG +D A + +E +PD ++ L+ L +G + ++ ++F+ +C
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 344 LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++ L + + EA +++L K P
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 5/263 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG-EI-SVKPDLVSYNT 172
A ++ DEM R + ++N ++ +V+R F+ V E+ +PD++SYN
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG---MVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
+++A +E ++ +M P+++T++ L+ L +G+ EE L M K
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
L+PD SY+ + E + A+EFL+ M PD+ + N ++ G D+A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
+ FG++ + P+ +++ T+ L GD A+ ++ E+ + ++ L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 353 VSESMLSEAKEIVELGKTNRYHP 375
E M+ EA E++ ++ +HP
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHP 506
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS-KQYRVVERIFKEVPGEISVKPD 166
K+G +A ++F ++ E C+ S+N + +A S + R + I + + + PD
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPD 472
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++YN++I C+ + + A +L +M P ++T+N +L G R E+ +
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
M G P+ +Y + G+ EA+E ++ + D + +S + + F
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE-YSFKRLHRTFPLLN 591
Query: 287 NLDEAKKWFG 296
L + + FG
Sbjct: 592 VLQRSSQTFG 601
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G + E L M K +PD+ + G + +AV ++ +EK +PD+F+
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
NA+I GF +D+A + + + PD T+ ++ LC +G L A+ V+ ++ +
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
C+ ++++ + E + EA ++++
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMD 252
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A++MFD+M R + +++ L++ ++F E+ + PD
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY-PDS 268
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V++N ++ FCK A +L EK+G L +++L+DGL+ R+ + +L+
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M KN+ PDI Y + GL+ K +A++ L M K + PD + NA+IK G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+E + E+ ++E+ PD T L+ +C G ++ A ++ EI + C
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 348 VVDKLVSESMLSEAKEIVE 366
++D L L EA+ ++
Sbjct: 449 LIDGLCKSGELKEARLLLH 467
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 124/298 (41%), Gaps = 35/298 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ Y K GM ++A + F M E +C V ++N +L + + + ++ +
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P+L ++ ++ K A M ++M G+SP+ +T+ L+ GL G ++
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 222 EKLWGQMGGKNLSPD-----------------------------------IRSYNARLLG 246
KL+ +M PD +R Y++ + G
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L ++ +A E M KK++KPD+ +I+G G +++A K + PD
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ ++ LC +G L+ + E+ T A +++ + ++ EA+EI
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 41/301 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV---- 157
LI ++G+ + A ++F E+ + C+ +V +FNAL+ S + + + ++
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 158 PGEISVK----------------------------------PDLVSYNTVIKAFCKSKVF 183
P + ++ PD+VSYN +I FC++
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI 533
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+ A+ +L ++ G+SPD +T+NTL++GL+ GR EE KL+ SP + Y +
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSL 591
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ ++K A + KK D + N I + F EG + A + E++ ++
Sbjct: 592 MTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGETERALRRLIELDTRKD 650
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
+ + + LC+ G A+ V + + V P ++ L L A E
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIE 710
Query: 364 I 364
+
Sbjct: 711 V 711
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
LEE++ GVS D F L+ G E+ + +G+M + PD+ +YN L +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 250 EKKTGE-AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN 308
E+ A EM K + P+L++ ++ G +G +A+K F ++ P++
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 309 TFATLVPFLCEKGDLKTAIDVVKEI 333
T+ L+ LC++G A + E+
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEM 259
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
D QK Y A +I++ GK G A MF+ + E + V S+ +L++
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK-SKVFESAVSMLEEMEKNGV 198
A+ +S +YR +FK++ E KP L++YN ++ F K + S++E+M+ +G+
Sbjct: 217 AFANSGRYREAVNVFKKME-EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
+PD T+NTL+ +E +++ +M S D +YNA L + EA++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
L EM P + + N++I + +G LDEA + ++ + PD T+ TL+
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 319 EKGDLKTAIDVVKEIFNTRCR 339
G +++A+ + +E+ N C+
Sbjct: 396 RAGKVESAMSIFEEMRNAGCK 416
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 14/286 (4%)
Query: 55 DRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLIT------LYGK 108
D F Y + A + ++R +++ + ++ +G LIT ++GK
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE------DGCKPTLITYNVILNVFGK 255
Query: 109 SGMP-KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
G P + + ++M ++N L+ ++ ++F+E+ D
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDK 314
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+YN ++ + KS + A+ +L EM NG SP ++T+N+L+ +G +E +L Q
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PD+ +Y L G K A+ +EM KP++ + NA IK + N G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E K F EI PD T+ TL+ + G V KE+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 82 DIL-EHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSF 134
D+L E ++ +S+ + GFS + TL YG+ M +A + D M ER T ++ ++
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N+L+ + S + E I +E+ + +KPD++SYNTVI A+C++ A + EM
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+G+ PD+IT+NT + A+ FEE + M P+ +YN+ + G +
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 255 EAVEFLQEMEKKD 267
EA F++++ D
Sbjct: 787 EAKLFVEDLRNLD 799
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LIT + + + A Q+F+EM + +++NALL Y S + + ++ E+
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN- 343
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P +V+YN++I A+ + + + A+ + +M + G PD+ T+ TLL G G+ E
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M P+I ++NA + K E ++ E+ + PD+ + N ++
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F G E F E++++ P++ TF TL+ G + A+ V + + +
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V+ L M ++++++ + R P
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + GM +++ ++ EM + C L++ +LL AY + K+ ++ + +EV +
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++P V T++ K + A E+++ G SPD+ T N+++ +
Sbjct: 590 -IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ M + +P + +YN+ + + G++ E L+E+ K +KPD+ S N +I
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ + +A + F E+ S PD T+ T + + AI VV+ + CR
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
+VD + EAK VE
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ Y + GM A ++ ++M E+ V ++ LL+ + + + IF+E+
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNA 413
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
KP++ ++N IK + F + + +E+ G+SPD++T+NTLL G E
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M P+ ++N + + +A+ + M V PDL + N ++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
G ++++K E+E P++ T+ +L+ ++ + +E+++
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 342 APLLQLVVDKLVSESMLSEAK 362
A LL+ +V +L EA+
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAE 614
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 164/335 (48%), Gaps = 7/335 (2%)
Query: 37 KEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKE 96
+E + + ++D F KA F Y + L K+F V IL K + +E
Sbjct: 65 RERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQE 124
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL---LAAYLHSKQYRVVERI 153
L+ + +S + + +MF+ + + R S NA+ L + S + + ++
Sbjct: 125 SLFLNLMRHFSRSDLHDKVMEMFNLI--QVIARVKPSLNAISTCLNLLIDSGEVNLSRKL 182
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS-PDLITFNTLLDGL 212
+ ++P+ +N ++K CK+ A ++EEM+++G+S P+ IT++TL+D L
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 213 YAEGRFEEGEKLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
+A R +E +L+ M K +SPD ++N + G + A + L M+K P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+++ +A++ GF G + EAK+ F E++K+ D + TL+ C G+ A+ ++
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 332 EIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
E+ +RCR +++ L SE EA ++++
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 104/197 (52%), Gaps = 2/197 (1%)
Query: 132 LSFNALL-AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
++++ L+ + HS+ VE +F+++ + + PD V++N +I FC++ E A +L
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVE-LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
+ M+KNG +P++ ++ L++G G+ +E ++ + ++ L D Y +
Sbjct: 292 DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+T EA++ L EM+ + D + N I++G +EG +EA + + +K ++
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 311 ATLVPFLCEKGDLKTAI 327
++ LC G+L+ A+
Sbjct: 412 RIILNALCCNGELEKAV 428
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPER-NCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
+S + L+ S K A ++F++M + + ++FN ++ + + + ++I +
Sbjct: 235 YSTLMDCLFAHS-RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL-D 292
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ P++ +Y+ ++ FCK + A +E++K G+ D + + TL++ G
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+E KL G+M D +YN L GL+ E ++ EA++ L + + V + S
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
I+ G L++A K+ + + P T+ LV LCE G + + V+
Sbjct: 413 IILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI 472
Query: 337 RCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
G VV+ + E L E+++
Sbjct: 473 GLIPGPKSWGAVVESICKERKLVHVFELLD 502
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A ++ D+M +R+ + ++N+L+ + + +++F+ + +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK- 319
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PDL +YNT+IK FCKSK E + EM G+ D +T+ TL+ GL+ +G +
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+K++ QM + PDI +Y+ L GL K +A+E M+K ++K D++ +I+G
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G +D+ F + P+ T+ T++ LC K L+ A ++K++
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 137/279 (49%), Gaps = 9/279 (3%)
Query: 95 KEGFSARLITLYGK--SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
+ G L+T YG +G+ KR A + ++M V+ FN ++ + +
Sbjct: 143 QRGCQPNLVT-YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+FKE+ + ++P++V+Y+++I C + A +L +M + ++P+L+TFN
Sbjct: 202 DDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+D EG+F E EKL M +++ PDI +YN+ + G + + +A + + M KD
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
PDL + N +IKGF +++ + F E+ D T+ TL+ L GD A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
V K++ + +++D L + L +A E+ +
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 114 RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
+A+QMF+ M ++C + ++N L+ + SK+ +F+E+ + D V+Y T+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTL 366
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
I+ ++A + ++M +GV PD++T++ LLDGL G+ E+ +++ M +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
DI Y + G+ K + + + K VKP++ + N +I G ++ L EA
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
++++ PD T+ TL+ GD + ++++E+ + R A + LV + L
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
++ FN LL+A K++ +V + +++ + + +L +YN +I FC+ A+++
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
L +M K G P ++T ++LL+G R + L QM PD ++ + GL +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
K EAV + M ++ +P+L + ++ G G++D A ++E ++ + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
F T++ LC+ + A+++ KE+ R ++ L S S+A +++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
++M + + ++N L+ + Q + + ++ ++ +P +V+ ++++ +C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCH 92
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
K AV+++++M + G PD ITF TL+ GL+ + E L +M + P++ +
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
Y + GL A L +ME ++ D+ N II ++D+A F E+E
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
P+ T+++L+ LC G A ++ ++ + ++D V E
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 360 EAKEI 364
EA+++
Sbjct: 273 EAEKL 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 134/294 (45%), Gaps = 19/294 (6%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFR--------GVIDILEHQKQY 90
V L+D F K +F +++D ++R F + D L+ KQ
Sbjct: 256 VTFNALIDAFVKE---GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 91 SDF--SKEGFS-----ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+F SK+ F LI + KS + ++F EM R +++ L+ H
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+++FK++ + V PD+++Y+ ++ C + E A+ + + M+K+ + D+
Sbjct: 373 DGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
+ T+++G+ G+ ++G L+ + K + P++ +YN + GL ++ EA L++M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
++ PD + N +I+ + +G+ + + E+ D +T + L
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + +N ++ A K K F+ +S+ E+M++ G+S +L T+N L++ + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
G+M P I + ++ L G K+ +AV + +M + +PD + +I G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
EA + + P+ T+ +V LC++GD+ A +++ ++ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 345 LQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
++D L + +A + + +T P
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 142/285 (49%), Gaps = 9/285 (3%)
Query: 54 VDRFRTKTGI--YEDTVRRLAGAKQFRGVIDILEH-QKQYSDFSKEGFSARLITLYGKSG 110
+D F+ K + + + AG ++ + + ++ Q+Q E +I+L G+ G
Sbjct: 96 LDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREG 155
Query: 111 MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
+ + ++FDEMP + +R+V S+ AL+ AY + +Y + + E + P +++Y
Sbjct: 156 LLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE-KISPSILTY 214
Query: 171 NTVIKAFCKSKV-FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
NTVI A + + +E + + EM G+ PD++T+NTLL G +E E ++ M
Sbjct: 215 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ PD+ +Y+ + ++ + + L EM PD+ S N +++ + G++
Sbjct: 275 DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
EA F +++ + P+ NT++ L+ + G D V+++F
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG----RYDDVRQLF 375
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 2/206 (0%)
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
+F EM ++++N LL+A E +F+ + + + PDL +Y+ +++ F
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETF 292
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
K + E +L EM G PD+ ++N LL+ G +E ++ QM +P+
Sbjct: 293 GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
+Y+ L + + + EM+ + PD + N +I+ F G E F +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDL 323
+ + +PD T+ ++ F C KG L
Sbjct: 413 MVEENIEPDMETYEGII-FACGKGGL 437
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y KSG K A +F +M CT +++ LL + S +Y V ++F E+
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS- 381
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD +YN +I+ F + F+ V++ +M + + PD+ T+ ++ G E+
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K+ M ++ P ++Y + EA+ M + P + + ++++
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F G + E++ + S +++TF + + G + A+ ++ +RC
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
L+ V+ ++ E +E E K + P
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I GK G+ + AR++ M + + ++ ++ A+ + Y F + E+
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH-EV 486
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P + ++++++ +F + + + + ++L + +G+ + TFN ++ G+FEE
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
K + M PD R+ A L + + E E +EM+ D+ P +
Sbjct: 547 VKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 42/297 (14%)
Query: 60 KTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMF 119
K G++ED + L Q+ DI+ K Y+ +I +G++ + + A F
Sbjct: 434 KGGLHEDARKIL----QYMTANDIVPSSKAYTG---------VIEAFGQAALYEEALVAF 480
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
+ M E ++ +F++LL ++ + E I + + + + ++N I+A+ +
Sbjct: 481 NTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV-DSGIPRNRDTFNAQIEAYKQ 539
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF-EEGEKLWGQMGGKNLSPDIR 238
FE AV +MEK+ PD T +L +Y+ R +E + + +M ++ P I
Sbjct: 540 GGKFEEAVKTYVDMEKSRCDPDERTLEAVLS-VYSFARLVDECREQFEEMKASDILPSIM 598
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG-FVNEGN---------- 287
Y L ++ + E L+EM V + +IKG + ++ N
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDK 658
Query: 288 ---------------LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
L +A W G+ E++ ++ T L P L K L ++DV
Sbjct: 659 LNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDV 715
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI G+ +A +FDEM R C V ++ L+ + + +++ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD- 365
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P +++YN +I +CK A +L MEK P++ TFN L++GL G+ +
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M LSPDI SYN + GL E A + L M D++PD + AII
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F +G D A + G + + D+ T TL+ +C+ G + A+ +++ + R
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNR 372
L +++D L + E E+ LGK N+
Sbjct: 546 PHSLNVILDMLSKGCKVKE--ELAMLGKINK 574
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 113 KRARQMFDEMP-ERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISVKPDLVS 169
+ A ++FD M E C +S++ L+ + +E F K+ GE +P +
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR---LEEAFGLKDQMGEKGCQPSTRT 303
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y +IKA C + + A ++ +EM G P++ T+ L+DGL +G+ EE + +M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ P + +YNA + G + + A E L MEK+ KP++ + N +++G G
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+A + + PD ++ L+ LC +G + TA
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 106/231 (45%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
+LL + R ++F + E++ P+ VSY+ +I C+ E A + ++M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ G P T+ L+ L G ++ L+ +M + P++ +Y + GL + K
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
EA ++M K + P + + NA+I G+ +G + A + +EK P+ TF L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
LC G A+ ++K + + +++D L E ++ A +++
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH-SKQYRVVERIFKEVPGE 160
LI Y K G A ++ M +R C V +FN L+ K Y+ V + + +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+S PD+VSYN +I C+ +A +L M + PD +TF +++ +G+ +
Sbjct: 437 LS--PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
G M K +S D + + G+ KT +A+ L+ + K + SLN I+
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
+ E G+I K P T+ TLV L GD+ + +++ + + C
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
++++ L + EA++++ + + P
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 109/278 (39%), Gaps = 40/278 (14%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+ G P +A + M + + ++S+N L+ ++ + ++PD
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDC 476
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR---------- 217
+++ +I AFCK + A + L M + G+S D +T TL+DG+ G+
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 218 -------------------------FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
+E + G++ L P + +Y + GL
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+ L+ M+ P+++ II G G ++EA+K ++ S P+ T+
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 313 LVPFLCEKGDLKTAIDVVKEI----FNTRCRVGAPLLQ 346
+V G L A++ V+ + + R+ + LLQ
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ + P +V+Y T++ +S + +LE M+ +G P++ + +++GL GR E
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E EKL M +SP+ +Y + G K A+E ++ M ++ + + ++++
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Query: 280 KGFV--NEGNLDEAKKWFGEIEKSENDPD 306
+GFV +G + + +I E DP+
Sbjct: 694 QGFVLSQKGIDNSEESTVSDIALRETDPE 722
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 1/208 (0%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
Y++++ + K + A ME +G +I + T+++ L G E E ++
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK-DVKPDLFSLNAIIKGFVNEGN 287
D + LLG +A++ M K+ P+ S + +I G G
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+EA ++ + P T+ L+ LC++G + A ++ E+ C+ +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 348 VVDKLVSESMLSEAKEIVELGKTNRYHP 375
++D L + + EA + +R P
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFP 369
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 9/251 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL Y S A + D+M E +F L+ +LH+K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V + + V + +PDLV+Y TV+ CK + A+S+L++MEK + D++ +NT
Sbjct: 206 EAVALVDQMV--QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++DGL ++ L+ +M K + PD+ +Y++ + L + +A L +M ++
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ P++ + +A+I FV EG L EA+K + E+ K DPD T+++L+ C L A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 328 DVVKEIFNTRC 338
+ + + + C
Sbjct: 384 HMFELMISKDC 394
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 118/219 (53%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + D+M +R C ++++ ++ + + K++ + ++ D+V YNT+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYNTII 265
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
CK K + A+++ EM+ G+ PD+ T+++L+ L GR+ + +L M + ++
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +++A + E K EA + EM K+ + PD+F+ +++I GF LDEAK
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + + P+ T++TL+ C+ ++ +++ +E+
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 57 FRTKTGIYEDTVR-RLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRA 115
F + +G Y + +R RL+ + +D+ + F +L++ K +
Sbjct: 43 FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV 102
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK 175
+ ++M + + +++ + + Q + + ++ ++ +PD+V+ ++++
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLN 161
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
+C SK AV+++++M + G PD TF TL+ GL+ + E L QM + P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D+ +Y + GL A+ L++MEK ++ D+ N II G ++D+A F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSE 355
E++ PD T+++L+ LC G A ++ ++ + ++D V E
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 356 SMLSEAKEIVE 366
L EA+++ +
Sbjct: 342 GKLVEAEKLYD 352
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 124/236 (52%), Gaps = 2/236 (0%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
FSA LI + K G A +++DEM +R+ + ++++L+ + + + +F E+
Sbjct: 331 FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-EL 388
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
P++V+Y+T+IK FCK+K E + + EM + G+ + +T+ TL+ G +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ + ++ QM + P+I +YN L GL K +A+ + +++ ++PD+++ N
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I+G G +++ + F + P+ + T++ C KG + A ++K++
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C+ R+ + + D + R F +ID ++E +K Y + K +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
T L M R A+ MF+ M ++C V++++ L+ + +K+ +F+E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + + + V+Y T+I F +++ ++A + ++M GV P+++T+N LLDGL G
Sbjct: 424 M-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ + ++ + + PDI +YN + G+ K + E + K V P++ + N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
+I GF +G+ +EA ++++ P+ T+ TL+ GD + + +++KE+ +
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 337 RCRVGAPLLQLVVDKL 352
A + LV + L
Sbjct: 603 GFAGDASTIGLVTNML 618
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 95 KEGFSARLITLYGK--SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
+ G L+T YG +G+ KR A + +M + V+ +N ++ K
Sbjct: 216 QRGCQPDLVT-YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+F E+ + ++PD+ +Y+++I C + A +L +M + ++P+++TF+
Sbjct: 275 DDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+D EG+ E EKL+ +M +++ PDI +Y++ + G + + EA + M KD
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
P++ + + +IKGF ++E + F E+ + + T+ TL+ + D A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V K++ + +++D L L++A + E + + P
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 36/286 (12%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A ++FDEM +R+ ++++N+L+ + + ++IF + +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 162 SVKPDLVSYNTVIKAFCKSK-------VF----------------------------ESA 186
+ PD+V+YNT+I FCK+K +F ++A
Sbjct: 376 CL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ ++M +GV P+++T+NTLLDGL G+ E+ ++ + + PDI +YN G
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ K + + + K VKPD+ + N +I GF +G +EA F ++++ PD
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
T+ TL+ GD + +++KE+ + R A LV D L
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G P A + ++M + V+ ++ ++ + + +F E+ + ++PD+
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDV 275
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+Y+++I C + A +L +M + ++P+++TFN+L+D EG+ E EKL+ +
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M +++ P+I +YN+ + G + + EA + M KD PD+ + N +I GF
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
+ + + F ++ + + T+ TL+ + D A V K++ +
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 348 VVDKLVSESMLSEAKEIVELGKTNRYHP 375
++D L L +A + E + ++ P
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM + +++ F+ LL+A K++ +V F E + V +L +YN +I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYNIMI 107
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C+ A+++L +M K G P ++T N+LL+G R E L QM
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD ++ + GL K EAV ++ M K +PDL + A+I G G D A
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
++EK + + D ++T++ LC+ + A+++ E+ N R
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL + A + D+M E ++F L+ + H+K
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V + + V +PDLV+Y VI CK + A+++L +MEK + D++ ++T
Sbjct: 188 EAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++D L ++ L+ +M K + PD+ +Y++ + L + +A L +M ++
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ P++ + N++I F EG L EA+K F E+ + DP+ T+ +L+ C L A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 328 DVVKEIFNTRC 338
+ + + C
Sbjct: 366 QIFTLMVSKDC 376
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P +V+ N+++ FC AV+++++M + G PD +TF TL+ GL+ + E L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M K PD+ +Y A + GL + A+ L +MEK ++ D+ + +I
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
++D+A F E++ PD T+++L+ LC G A ++ ++ +
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 345 LQLVVDKLVSESMLSEAKEIVE 366
++D E L EA+++ +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFD 334
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
++++ N+LL + H + + ++ E+ +PD V++ T++ + AV++
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+E M G PDL+T+ +++GL G + L +M + D+ Y+ + L
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+ +A+ EM+ K ++PD+F+ +++I N G +A + ++ + + +P+ T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
F +L+ ++G L A + E+ +++ L EA++I L
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
+ AV + EM K+ P ++ F+ LL + +F+ +M +S ++ +YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ L + A+ L +M K P + +LN+++ GF + + EA ++ +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
PD TF TLV L + A+ +V+ + C+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + F EM + + + L+ + R + F E+ + PD+++Y +I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAII 393
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A + EM G+ PD +TF L++G G ++ ++ M S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +Y + GL E A E L EM K ++P++F+ N+I+ G GN++EA K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
GE E + + D T+ TL+ C+ G++ A +++KE+ + ++++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 355 ESMLSEAKEIV 365
ML + ++++
Sbjct: 574 HGMLEDGEKLL 584
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 7/310 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFS------ARLITLYGKSGMPKRAR 116
I D + A F + D++E K + + +G LI Y K+G K A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++ + M + C+ V+++ L+ + E+ +I ++P++ +YN+++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNG 500
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
CKS E AV ++ E E G++ D +T+ TL+D G ++ +++ +M GK L P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
I ++N + G + + + L M K + P+ + N+++K + NL A +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSES 356
++ PD T+ LV C+ ++K A + +E+ V +++ +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 357 MLSEAKEIVE 366
EA+E+ +
Sbjct: 681 KFLEAREVFD 690
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISVKPDLVSYNTVIK 175
+F E PE V S+N ++ + + + E+ G PD++SY+TV+
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---YTPDVISYSTVVN 289
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
+C+ + ++E M++ G+ P+ + +++ L + E E+ + +M + + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D Y + G A +F EM +D+ PD+ + AII GF G++ EA K F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSE 355
E+ +PD TF L+ C+ G +K A V + C ++D L E
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 356 SMLSEAKEIVE 366
L A E++
Sbjct: 470 GDLDSANELLH 480
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 1/264 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + G K A + M + T V+S++ ++ Y + V ++ EV
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVMKRK 310
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP+ Y ++I C+ A EM + G+ PD + + TL+DG G
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K + +M ++++PD+ +Y A + G EA + EM K ++PD + +I G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G++ +A + + ++ P+ T+ TL+ LC++GDL +A +++ E++ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 342 APLLQLVVDKLVSESMLSEAKEIV 365
+V+ L + EA ++V
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KSG + A ++ E +++ L+ AY S + + I KE+ G+ ++P +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTI 561
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V++N ++ FC + E +L M G++P+ TFN+L+ + ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + + PD ++Y + G + EA QEM+ K + + + +IKGF+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 288 LDEAKKWFGEIEKSENDPDKNTF 310
EA++ F ++ + DK F
Sbjct: 682 FLEAREVFDQMRREGLAADKEIF 704
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI--FKEVPGEISVKPDL 167
G+ + AR++F++M +V S N L L Y+ I F+E P E+ V ++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTR-LSKDCYKTATAIIVFREFP-EVGVCWNV 246
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
SYN VI C+ + A +L ME G +PD+I+++T+++G RF E +K+W
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY---CRFGELDKVW-- 301
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ ++ M++K +KP+ + +II
Sbjct: 302 ------------------------------KLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
L EA++ F E+ + PD + TL+ C++GD++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + F EM + + + L+ + R + F E+ + PD+++Y +I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAII 393
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A + EM G+ PD +TF L++G G ++ ++ M S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +Y + GL E A E L EM K ++P++F+ N+I+ G GN++EA K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
GE E + + D T+ TL+ C+ G++ A +++KE+ + ++++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 355 ESMLSEAKEIV 365
ML + ++++
Sbjct: 574 HGMLEDGEKLL 584
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 7/310 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFS------ARLITLYGKSGMPKRAR 116
I D + A F + D++E K + + +G LI Y K+G K A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++ + M + C+ V+++ L+ + E+ +I ++P++ +YN+++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNG 500
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
CKS E AV ++ E E G++ D +T+ TL+D G ++ +++ +M GK L P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
I ++N + G + + + L M K + P+ + N+++K + NL A +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSES 356
++ PD T+ LV C+ ++K A + +E+ V +++ +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 357 MLSEAKEIVE 366
EA+E+ +
Sbjct: 681 KFLEAREVFD 690
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISVKPDLVSYNTVIK 175
+F E PE V S+N ++ + + + E+ G PD++SY+TV+
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---YTPDVISYSTVVN 289
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
+C+ + ++E M++ G+ P+ + +++ L + E E+ + +M + + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D Y + G A +F EM +D+ PD+ + AII GF G++ EA K F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSE 355
E+ +PD TF L+ C+ G +K A V + C ++D L E
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 356 SMLSEAKEIVE 366
L A E++
Sbjct: 470 GDLDSANELLH 480
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 1/264 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + G K A + M + T V+S++ ++ Y + V ++ EV
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVMKRK 310
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP+ Y ++I C+ A EM + G+ PD + + TL+DG G
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K + +M ++++PD+ +Y A + G EA + EM K ++PD + +I G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G++ +A + + ++ P+ T+ TL+ LC++GDL +A +++ E++ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 342 APLLQLVVDKLVSESMLSEAKEIV 365
+V+ L + EA ++V
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KSG + A ++ E +++ L+ AY S + + I KE+ G+ ++P +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTI 561
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V++N ++ FC + E +L M G++P+ TFN+L+ + ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + + PD ++Y + G + EA QEM+ K + + + +IKGF+
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 288 LDEAKKWFGEIEKSENDPDKNTF 310
EA++ F ++ + DK F
Sbjct: 682 FLEAREVFDQMRREGLAADKEIF 704
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI--FKEVPGEISVKPDL 167
G+ + AR++F++M +V S N L L Y+ I F+E P E+ V ++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTR-LSKDCYKTATAIIVFREFP-EVGVCWNV 246
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
SYN VI C+ + A +L ME G +PD+I+++T+++G RF E +K+W
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY---CRFGELDKVW-- 301
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ ++ M++K +KP+ + +II
Sbjct: 302 ------------------------------KLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
L EA++ F E+ + PD + TL+ C++GD++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 129/259 (49%), Gaps = 1/259 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+SG A + +M ERN V +++ ++ + +FKE+ + +K +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSV 263
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+YN++++ CK+ + +L++M + P++ITFN LLD EG+ +E +L+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + +SP+I +YN + G ++ + EA L M + PD+ + ++IKG+
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
+D+ K F I K + T++ LV C+ G +K A ++ +E+ + +
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 348 VVDKLVSESMLSEAKEIVE 366
++D L L +A EI E
Sbjct: 444 LLDGLCDNGKLEKALEIFE 462
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 85 EHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
E + Y + G S +IT Y A M D M C+ +++F +L+
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
Y K+ ++F+ + + + V+Y+ +++ FC+S + A + +EM +GV
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
PD++T+ LLDGL G+ E+ +++ + + I Y + G+ K +A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+ K VKP++ + +I G +G+L EA ++E+ N P+ T+ TL+
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 319 EKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
GDL + +++E+ + A +++V+D L+S
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM +++ F+ +A +KQ+ +V K++ + ++ + N +I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMI 130
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A S+L ++ K G PD TFNTL+ GL+ EG+ E L +M
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD+ +YN+ + G+ T A++ L++ME+++VK D+F+ + II +G +D A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F E+E T+ +LV LC+ G ++K++ + +++D V
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 355 ESMLSEAKEI 364
E L EA E+
Sbjct: 311 EGKLQEANEL 320
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+ G A +F EM + +V+++N+L+ + ++ + K++ + P++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 298
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+++N ++ F K + A + +EM G+SP++IT+NTL+DG + R E +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M SPDI ++ + + G + K+ + ++ + + K+ + + + + +++GF G
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
+ A++ F E+ PD T+ L+ LC+ G L+ A+++ +++ ++ +G +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 348 VVDKL 352
+++ +
Sbjct: 479 IIEGM 483
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 3/207 (1%)
Query: 133 SFNALL-AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
+FN L+ +L K V + + V E +PD+V+YN+++ C+S A+ +L
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMV--ENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
+ME+ V D+ T++T++D L +G + L+ +M K + + +YN+ + GL
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
K + L++M +++ P++ + N ++ FV EG L EA + + E+ P+ T+
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRC 338
TL+ C + L A +++ + +C
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKC 364
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 115/230 (50%), Gaps = 7/230 (3%)
Query: 147 YRVVERIFKEVPGEISVKPDLVSYNTVIKA-FCKSKVFESAVSMLEEMEKNGVSPDLITF 205
Y V+ ++ K + +PD ++NT+IK F + KV E AV +++ M +NG PD++T+
Sbjct: 143 YSVLGKVMK-----LGYEPDTTTFNTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTY 196
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N++++G+ G L +M +N+ D+ +Y+ + L + A+ +EME
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
K +K + + N++++G G ++ ++ E P+ TF L+ ++G L+
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 326 AIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A ++ KE+ ++D ++ LSEA +++L N+ P
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G + A + +M E + V+ +NA++ + + +F E+ + + PD+
Sbjct: 53 KMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDV 111
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++Y+ +I +FC+S + A +L +M + ++PD++TF+ L++ L EG+ E E+++G
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + + P +YN+ + G + + +A L M K PD+ + + +I G+
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
+D + F E+ + + T+ TL+ C+ GDL A D++ + ++ Q
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Query: 348 VVDKLVSESMLSEAKEIVE-LGKTNRYH 374
++ L S+ L +A I+E L K+ +H
Sbjct: 292 MLASLCSKKELRKAFAILEDLQKSEGHH 319
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 84 LEHQKQYSDFSKEGFSARLITLYG------KSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
+ Q +++ +G +IT G +SG A Q+ +M ER V++F+AL
Sbjct: 93 IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Query: 138 LAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG 197
+ A + + E I+ ++ + P ++YN++I FCK A ML+ M
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRR-GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV 257
SPD++TF+TL++G R + G +
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNG-----------------------------------M 236
Query: 258 EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
E EM ++ + + + +I GF G+LD A+ + S P+ TF +++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 318 CEKGDLKTAIDVVKEI 333
C K +L+ A +++++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 109/221 (49%), Gaps = 13/221 (5%)
Query: 122 MPERNCTRTVLSFNALLAAYLHS----KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
M E C V++F L+ + +V+R+ +E +P Y T+I
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE-----GHQP----YGTIINGL 51
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
CK ESA+++L +ME+ + ++ +N ++D L +G + L+ +M K + PD+
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
+Y+ + + +A + L++M ++ + PD+ + +A+I V EG + EA++ +G+
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ + P T+ +++ C++ L A ++ + + C
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M + G PD++TF TL++GL EGR + L +M + P Y + GL
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
T A+ L +ME+ +K + NAII +G+ A+ F E+ PD T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
++ C G A +++++ + +++ LV E +SEA+EI
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +MF+ M + + +++A++ Y + R ++KE+ + P++V + T++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVA-ELLPNVVVFGTLV 311
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FCK++ +A S+ M K GV P+L +N L+ G G E L +M NLS
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD+ +Y + GL +E + EA Q+M+ + + P + N++I G+ E N+++A
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E+ S +P+ TF+TL+ C D+K A+ + E+
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 42/289 (14%)
Query: 85 EHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
E +K + K G L T Y K+G ++A ++ E+ V+ F L+
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
+ +++ +F + + V P+L YN +I CKS AV +L EME +
Sbjct: 312 DGFCKARELVTARSLFVHMV-KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
SPD+ T+ L++GL E + E +L+ +M + + P +YN+ + G E +A++
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVN---------------------------------- 284
EM V+P++ + + +I G+ N
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 285 -EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
E N+ EA + + ++ ++ P+ +TFA LV ++G L AID +E
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + KSG A + EM N + V ++ L+ Q R+F+++ E
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE- 403
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P +YN++I +CK E A+ + EM +GV P++ITF+TL+DG +
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ +M K + PD+ +Y A + E EA+ +M + + P+ + ++ G
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
F EG L A ++ E + + + F L+ LC+ G
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
F L+SK+ E++ E+ + +KP++ Y I C+ E A M E M
Sbjct: 206 FQCCFKQGLYSKK----EKLLDEMTS-LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
+K+GV P+L T++ ++DG G + L+ ++ L P++ + + G ++
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
A M K V P+L+ N +I G GN+ EA E+E PD T+ L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 314 VPFLCEKGDLKTAIDVVKEIFNTR 337
+ LC + + A + +++ N R
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNER 404
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS---VKPDLVSYN 171
A ++F +M + ++N+L+ Y K+Y + + + ++ E++ V+P++++++
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGY--CKEYNMEQAL--DLCSEMTASGVEPNIITFS 448
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
T+I +C + ++A+ + EM G+ PD++T+ L+D + E +E +L+ M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
+ P+ ++ + G E + A++F QE ++ + +I+G G + A
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 292 KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
++F ++ PD ++ +++ KG L+
Sbjct: 569 SRFFSDMRSCGITPDICSYVSML-----KGHLQ 596
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%)
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
V E+ PD + +++ + + F+S + M G+ PD+ + L + +G
Sbjct: 154 VSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ + EKL +M + P++ Y +L L + K EA + + M+K V P+L++ +
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
A+I G+ GN+ +A + EI +E P+ F TLV C+ +L TA
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 94/211 (44%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+ Y + + K ++ +L+EM G+ P++ + + L + + EE EK+
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+ M + P++ +Y+A + G +A +E+ ++ P++ ++ GF
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
L A+ F + K DP+ + L+ C+ G++ A+ ++ E+ +
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 345 LQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
++++ L E ++EA + + K R P
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 37/216 (17%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K ++A + EM +++F+ L+ Y + + + ++ E+ +
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK- 473
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE-- 219
+ PD+V+Y +I A K + A+ + +M + G+ P+ TF L+DG + EGR
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 220 --------EGEKLWGQMG-------------------------GKNLSPDIRSYNARLLG 246
+ W +G ++PDI SY + L G
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
EK+ + + +M K + P+L +N ++ F
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPNLL-VNQLLARF 628
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
F LI + K G AR ++ EM R+ V ++N+L+ + + +F +
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ PD+V+YNT+I FCKSK E + + EM G+ D T+NTL+ G G+
Sbjct: 316 VSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+K++ +M +SPDI +YN L L K +A+ +++++K ++ D+ + N
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
II+G L EA F + + PD + T++ LC KG
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ SG A ++ +M +R V+ F AL+ ++ ++KE+
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR- 283
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SV P++ +YN++I FC A M + M G PD++T+NTL+ G R E+G
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL+ +M + L D +YN + G K A + M V PD+ + N ++
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
N G +++A +++KSE D D T+ ++ LC LK A + + + +
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A ++ L + + EA ++ K + + P
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 5/288 (1%)
Query: 35 LYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDT--VRRLAGAKQFRGVIDILEHQKQYSD 92
L E++ K D F C++ + R I + T + +A +F VI L H+ +
Sbjct: 51 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVI-YLYHKMENLG 109
Query: 93 FSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE 151
S + +S LI + + A + +M + ++++ +LL + +++
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
+ + G P++V YNTVI CK++ +A+ + MEK G+ D +T+NTL+ G
Sbjct: 170 SLVDSMDG-FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L GR+ + +L M + + P++ + A + E EA +EM ++ V P+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
+F+ N++I GF G L +AK F + PD T+ TL+ C+
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 1/253 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM + +++ F +L ++ +V ++ ++ + + DL S+ +I
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME-NLGISHDLYSFTILI 121
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G P ++T +LL+G RF+E L M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ YN + GL + A+E MEKK ++ D + N +I G N G +A +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
++ K + DP+ F L+ ++G+L A ++ KE+ +++
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 355 ESMLSEAKEIVEL 367
L +AK + +L
Sbjct: 302 HGCLGDAKYMFDL 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 15/282 (5%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
K GF ++TL + + + A + D M V+ +N ++ ++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
+F + + ++ D V+YNT+I S + A +L +M K + P++I F L
Sbjct: 202 NALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+D EG E L+ +M +++ P++ +YN+ + G + G+A M K
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
PD+ + N +I GF +++ K F E+ D T+ TL+ C+ G L +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL----N 376
Query: 329 VVKEIFN--TRCRVGAPLL--QLVVDKLVSESMLSEAKEIVE 366
V +++FN C V ++ +++D L + + +A +VE
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS----KQYRVVERIFKEV 157
LI Y ++G A+++F+ M + + ++++N LL ++ K +VE + K
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS- 423
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E+ V D+++YN +I+ C++ + A + + + GV PD I + T++ GL +G
Sbjct: 424 --EMDV--DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARL 244
E +KL +M P R Y+ L
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYDETL 506
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K G + A DE ++ LS+ L+ AY SK+Y + ++ ++ E
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM-AER 409
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
KPD+V+Y +I S + AV+M ++ GVSPD +N L+ GL GRF
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L+ +M +N+ PD Y + G EA + +K VK D+ NA+IKG
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
F G LDEA + + PDK T++T++ ++ D+ TAI + + + +C+
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY--------RVVE 151
A LI Y KS A ++ +M ER C ++++ L+ + S ++++
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R V PD YN ++ CK+ F A + EM + PD + TL+DG
Sbjct: 444 R---------GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
G F+E K++ K + D+ +NA + G EA+ + M ++ + PD
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
F+ + II G+V + ++ A K F +EK++ P+ T+ +L+ C +GD K A + K
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 332 EI 333
E+
Sbjct: 615 EM 616
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 5/274 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALL-AAYLHSKQYRVVERIFKEVPGE 160
+I + K G + ++ E+ ER +V N ++ A Y H + E I + +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
KPD+ +YN +I CK E AV L+E K G+ P+ +++ L+ ++
Sbjct: 341 --CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
KL QM + PDI +Y + GL V +AV ++ + V PD N ++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G G AK F E+ PD +ATL+ GD A V +V
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYH 374
++ ML EA + + + N H
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEA--LACMNRMNEEH 550
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 31/278 (11%)
Query: 44 LVDKFKKACDVDRFR------TKTGIYEDTVRRLAGAKQF--RGVID---ILEHQKQYSD 92
L+D F ++ D D R + G+ D V A K F G++D ++
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 93 FSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE 151
+ F+ + +I Y K A ++F M + C V+++ +L+ + +++ E
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
FKE+ + P++V+Y T+I++ K S E AV E M N P+ +TFN LL
Sbjct: 611 ETFKEMQLR-DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 211 GLYA--------------EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
G G+ + + +M S +YN+ L+ L V A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
F +M KK PD S AI+ GF GN +K+W
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGN---SKQW 764
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G + R++ + + C ++ +N ++ Y +FKE+ + P L +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK-GFMPTLET 277
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
+ T+I FCK F ++ +L E+++ G+ + N ++D Y G + + G +
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ PD+ +YN + L E K AV FL E KK + P+ S +I+ + D
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
A K ++ + PD T+ L+ L G + A+++ ++ + A + +++
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 350 DKLVSESMLSEAK 362
L AK
Sbjct: 458 SGLCKTGRFLPAK 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 110/288 (38%), Gaps = 35/288 (12%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
+ D L +K+ FS + + L + + + + N T + + +L
Sbjct: 83 LFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLH 142
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
AY S I+ V PD+++ N+++ KS+ A + +EM G S
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
D + L+ G+ EG+ E G KL GK P+I YN + G A
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGN-------LDEAKK-------WF---------- 295
+E++ K P L + +I GF EG+ L E K+ WF
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 296 -----------GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
G I ++ PD T+ L+ LC++G + A+ + E
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
SF LLA Y + + +E + + E +VK + + V+ A+ +S AV + +
Sbjct: 104 SFLKLLARY---RIFNEIEDVLGNLRNE-NVKLTHEALSHVLHAYAESGSLSKAVEIYDY 159
Query: 193 M-EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
+ E PD+I N+LL L R + K++ +M + S D S + G+ E
Sbjct: 160 VVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEG 219
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
K + ++ K P++ N II G+ G+++ A F E++ P TF
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
T++ C++GD + ++ E+ RV L ++D
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 152/316 (48%), Gaps = 16/316 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C+ R+ + + D + R F +ID ++E +K Y + K +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
+T L M R A+QMF+ M ++C V+++N L+ + K+ +F+E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + + + V+YN +I+ ++ + A + +EM +GV P+++T+NTLLDGL G
Sbjct: 422 M-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E+ ++ + + P I +YN + G+ K + + + K VKPD+ + N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
+I GF +G+ +EA F E+++ P+ + TL+ GD + + +++KE+ +
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 337 RCRVGAPLLQLVVDKL 352
A + LV + L
Sbjct: 601 GFAGDASTIGLVTNML 616
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 125/251 (49%), Gaps = 9/251 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL Y S A + D+M ++FN L+ +LH+K
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+ I + V +PDLV+Y V+ CK + A ++L +ME+ + P ++ +NT
Sbjct: 204 EAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++DGL ++ L+ +M K + P++ +Y++ + L + +A L +M ++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ PD+F+ +A+I FV EG L EA+K + E+ K DP T+++L+ C L A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 328 DVVKEIFNTRC 338
+ + + + C
Sbjct: 382 QMFEFMVSKHC 392
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A + ++M + VL +N ++ K +FKE+ + ++P++
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNV 291
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+Y+++I C + A +L +M + ++PD+ TF+ L+D EG+ E EKL+ +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M +++ P I +Y++ + G + + EA + + M K PD+ + N +IKGF
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
++E + F E+ + + T+ L+ L + GD A ++ KE+ +
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 348 VVDKLVSESMLSEAKEIVELGKTNRYHP 375
++D L L +A + E + ++ P
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ +P++V+ ++++ +C SK AV+++++M G P+ +TFNTL+ GL+ +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E L +M K PD+ +Y + GL T A L +ME+ ++P + N II
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G ++D+A F E+E P+ T+++L+ LC G A ++ ++ +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVE 366
++D V E L EA+++ +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYD 350
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + D M + C ++++ ++ + + ++ + ++P ++ YNT+I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTII 263
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
CK K + A+++ +EME G+ P+++T+++L+ L GR+ + +L M + ++
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD+ +++A + E K EA + EM K+ + P + + +++I GF LDEAK+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + PD T+ TL+ C+ ++ ++V +E+
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM + +++ F+ LL+A ++ VV + +++ + + + +Y+ +I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSILI 123
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G P+++T ++LL+G R E L QM
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P+ ++N + GL + K EA+ + M K +PDL + ++ G G+ D A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++E+ + +P + T++ LC+ + A+++ KE+
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 137/309 (44%), Gaps = 9/309 (2%)
Query: 71 LAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRT 130
+A +F VI + E + + LI + + A + +M +
Sbjct: 91 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 150
Query: 131 VLSFNALLAAYLHSKQYR----VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
+++ ++LL Y HSK+ +V+++F V G +P+ V++NT+I A
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMF--VTG---YQPNTVTFNTLIHGLFLHNKASEA 205
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+++++ M G PDL+T+ +++GL G + L +M L P + YN + G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L K +A+ +EME K ++P++ + +++I N G +A + ++ + + +PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
TF+ L+ ++G L A + E+ +++ L EAK++ E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 367 LGKTNRYHP 375
+ P
Sbjct: 386 FMVSKHCFP 394
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYG 107
FK + + F+ +E +R+LA Q V +L+ K E +I++Y
Sbjct: 63 FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYR 122
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+ G+ +RA +MF + E C +V +N +L L + +++ +++++ + +P++
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD-GFEPNV 181
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+YN ++KA CK+ + A +L EM G PD +++ T++ + G +EG +L
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL--- 238
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ P + YNA + GL E A E ++EM +K + P++ S + +I N G
Sbjct: 239 --AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
++ A + ++ K P+ T ++LV +G A+D+ ++
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 55 DRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKR 114
+RF +Y + L ++G +++ + + LI + SG +
Sbjct: 240 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 115 ARQMFDEMPERNCTRTVLSFNALL-AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
A +M +R C + + ++L+ +L + ++ ++ ++ ++P++V+YNT+
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD-LWNQMIRGFGLQPNVVAYNTL 358
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
++ FC AVS+ ME+ G SP++ T+ +L++G G + +W +M
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P++ Y + L K EA ++ M K++ P + + NA IKG + G LD A+K
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 294 WFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
F ++E+ P+ T+ L+ L + ++ A + +EIF
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+NAL+ Y+ + +E+ E + P+++SY+T+I C S E A S L +M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMV-EKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM-GGKNLSPDIRSYNARLLGLAVEKK 252
K G P++ T ++L+ G + G + LW QM G L P++ +YN + G
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+AV ME+ P++ + ++I GF G+LD A + ++ S P+ +
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+V LC K A +++ + C P + L L A+++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 2/226 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + G +A +F M E C+ + ++ +L+ + I+ ++
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS- 416
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P++V Y +++A C+ F+ A S++E M K +P + TFN + GL GR +
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 222 EKLWGQMGGKN-LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
EK++ QM ++ P+I +YN L GLA + EA +E+ + V+ + N ++
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G N G A + G++ PD+ T ++ C++G + A
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 4/258 (1%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y V+ + + H ++ LI + K G A ++++M
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
C V+ + ++ A +++ E + E+ + + P + ++N IK C +
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 184 ESAVSMLEEMEK-NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
+ A + +ME+ + P+++T+N LLDGL R EE L ++ + + +YN
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE--K 300
L G G A++ + +M PD ++N II + +G + A + + +
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGR 593
Query: 301 SENDPDKNTFATLVPFLC 318
+ PD ++ ++ LC
Sbjct: 594 RKWRPDVISYTNVIWGLC 611
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 37/208 (17%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
K A + + M + NC +V +FNA + + + E++F+++ + P++V+YN
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGV---------------------------------- 198
++ K+ E A + E+ GV
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDG 558
Query: 199 -SPDLITFNTLLDGLYAEGRFEEGEKLWG--QMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
SPD IT N ++ +G+ E ++ G + PD+ SY + GL +
Sbjct: 559 KSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRED 618
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
V L+ M + P + + + +I F+
Sbjct: 619 GVILLERMISAGIVPSIATWSVLINCFI 646
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 74/173 (42%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
FK + K +++ +I+ +S +L++M+ G F +++
Sbjct: 61 HFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISV 120
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
G E +++ ++ P ++ YN L L E + ++M++ +P+
Sbjct: 121 YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPN 180
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+F+ N ++K +D AKK E+ PD ++ T++ +CE G +K
Sbjct: 181 VFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ Y +SG + ++ +M T +S+N L+A + ++ K + G+
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKS 302
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++P++V++NT+I FC++ + A + EM+ V+P+ +T+NTL++G +G E
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + M + DI +YNA + GL + KT +A +F++E++K+++ P+ + +A+I G
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N D + + + +S P++ TF LV C D A V++E+
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 141/304 (46%), Gaps = 3/304 (0%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDF-SKEGFSARLITLYGKSGMPKRARQMFDE 121
+++ + A K+FR D K Y + E +A + +L G+ G A + + E
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYRE 228
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M + + N +++ Y S + + +++ + + VSYNT+I C+
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCEKG 287
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
+ SA+ + M K+G+ P+++TFNTL+ G + +E K++G+M N++P+ +YN
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 242 ARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+ G + + A F ++M ++ D+ + NA+I G + +A ++ E++K
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 302 ENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
P+ +TF+ L+ C + + ++ K + + C ++V A
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Query: 362 KEIV 365
+++
Sbjct: 468 SQVL 471
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 115/248 (46%), Gaps = 7/248 (2%)
Query: 92 DFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
D + GF A LI + + G+ A ++ + M + V++FN L+ + +
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
+ + ++F E+ ++V P+ V+YNT+I + + E A E+M NG+ D++T+
Sbjct: 323 KLQEASKVFGEMKA-VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N L+ GL + + + + ++ +NL P+ +++A ++G V K E + M +
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
P+ + N ++ F + D A + E+ + D T + L +G +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 326 AIDVVKEI 333
+++E+
Sbjct: 502 VKKLLQEM 509
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + ++ + A ++F EM N +++N L+ Y + + R ++++
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN- 372
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ D+++YN +I CK A ++E++K + P+ TF+ L+ G + G
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L+ M P+ +++N + + A + L+EM ++ + D +++ + G
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 282 FVNEGNLDEAKKWFGEIE 299
++G KK E+E
Sbjct: 493 LKHQGKDQLVKKLLQEME 510
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ Y +SG + ++ +M T +S+N L+A + ++ K + G+
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL-KNMMGKS 302
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++P++V++NT+I FC++ + A + EM+ V+P+ +T+NTL++G +G E
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + M + DI +YNA + GL + KT +A +F++E++K+++ P+ + +A+I G
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N D + + + +S P++ TF LV C D A V++E+
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 141/304 (46%), Gaps = 3/304 (0%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDF-SKEGFSARLITLYGKSGMPKRARQMFDE 121
+++ + A K+FR D K Y + E +A + +L G+ G A + + E
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYRE 228
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M + + N +++ Y S + + +++ + + VSYNT+I C+
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCEKG 287
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
+ SA+ + M K+G+ P+++TFNTL+ G + +E K++G+M N++P+ +YN
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 242 ARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+ G + + A F ++M ++ D+ + NA+I G + +A ++ E++K
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 302 ENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
P+ +TF+ L+ C + + ++ K + + C ++V A
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Query: 362 KEIV 365
+++
Sbjct: 468 SQVL 471
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 115/248 (46%), Gaps = 7/248 (2%)
Query: 92 DFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
D + GF A LI + + G+ A ++ + M + V++FN L+ + +
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
+ + ++F E+ ++V P+ V+YNT+I + + E A E+M NG+ D++T+
Sbjct: 323 KLQEASKVFGEMKA-VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N L+ GL + + + + ++ +NL P+ +++A ++G V K E + M +
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
P+ + N ++ F + D A + E+ + D T + L +G +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 326 AIDVVKEI 333
+++E+
Sbjct: 502 VKKLLQEM 509
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + ++ + A ++F EM N +++N L+ Y + + R ++++
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN- 372
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ D+++YN +I CK A ++E++K + P+ TF+ L+ G + G
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L+ M P+ +++N + + A + L+EM ++ + D +++ + G
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 282 FVNEGNLDEAKKWFGEIE 299
++G KK E+E
Sbjct: 493 LKHQGKDQLVKKLLQEME 510
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 7/245 (2%)
Query: 85 EHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
+ + SD K+ + +IT + K+G A+++F+EM + ++++++L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
+ ++F + + D+VSYNT+I FCK+K E + + EM + G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
+ +T+NTL+ G + G ++ ++ + QM +SPDI +YN L GL + +A+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
++M+K+++ D+ + +I+G G ++EA F + PD T+ T++ LC
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 319 EKGDL 323
KG L
Sbjct: 482 TKGLL 486
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++ +M ++ T V++++ALL A++ + + + +F+E+ +S+ PD+V+Y+++I
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLI 302
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C + A M + M G D++++NTL++G R E+G KL+ +M + L
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
+ +YN + G +A EF +M+ + PD+++ N ++ G + G L++A
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
F +++K E D D T+ T++ +C+ G ++ A
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 123/224 (54%), Gaps = 4/224 (1%)
Query: 113 KRARQMFD---EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
KR FD E+ + V+++ AL+ +S ++ R+ ++ + + P++++
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVIT 262
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y+ ++ AF K+ A + EEM + + PD++T+++L++GL R +E +++ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
K D+ SYN + G K+ + ++ +EM ++ + + + N +I+GF G++D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+A+++F +++ PD T+ L+ LC+ G+L+ A+ + +++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F +M + +++ FN LL+A + K+Y VV + K++ + ++ DL ++N VI
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME-VLGIRNDLYTFNIVI 127
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC A+S+L +M K G PD +T +L++G R + L +M
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PDI +YNA + L K+ +A +F +E+E+K ++P++ + A++ G N +A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
++ K + P+ T++ L+ + G + A ++ +E+ +++ L
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 355 ESMLSEAKEIVEL 367
+ EA ++ +L
Sbjct: 308 HDRIDEANQMFDL 320
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 93/174 (53%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
EI KPD+V+YN +I + CK+K A +E+E+ G+ P+++T+ L++GL R+
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ +L M K ++P++ +Y+A L K EA E +EM + + PD+ + +++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G +DEA + F + D ++ TL+ C+ ++ + + +E+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A QMFD M + C V+S+N L+ + +K+ ++F+E+ + + + V+YNT+I
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS-QRGLVSNTVTYNTLI 372
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ F ++ + A +M+ G+SPD+ T+N LL GL G E+ ++ M + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
DI +Y + G+ K EA + K +KPD+ + ++ G +G L E +
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 295 FGEIEK 300
+ ++++
Sbjct: 493 YTKMKQ 498
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K+ + ++F EM +R +++N L+ + + + F ++
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FF 394
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD+ +YN ++ C + E A+ + E+M+K + D++T+ T++ G+ G+ EE
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
L+ + K L PDI +Y + GL + E +M+++
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 85 EHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
+ K + + S+ G + +T + ++G +A++ F +M + + ++N LL
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
+ + IF+++ + D+V+Y TVI+ CK+ E A S+ + G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
PD++T+ T++ GL +G E E L+ +M
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 51 ACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQY-------SDFSKEGFSARLI 103
A DV + K GI D V + +I L H + SD + G S +I
Sbjct: 203 ALDVLKHMKKMGIRPDVV-------TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 104 T------LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
T +YGK G A++ ++EM +R+ ++++N+L+ +++ +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ P+ V+YNT+I +CK+K + + +L M ++GV D T+NTL G G+
Sbjct: 316 VSK-GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
F EK+ G+M + PD+ ++N L GL K G+A+ L++++K + + N
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
IIKG +++A F + PD T+ T++
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F +M E + +++ F+ LL A +Y V +F+ + + + DL S+ T+I
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE-MLGISHDLYSFTTLI 121
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+S L +M K G P ++TF +L++G RF E L Q+ G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ YN + L + + A++ L+ M+K ++PD+ + N++I + G + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
++ + PD TF+ L+ ++G L A E+ +++ L
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 355 ESMLSEAKEIVELGKTNRYHP 375
+L EAK+++ + + + P
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFP 322
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G A + M + V+++N+L+ HS + V RI ++ + + PD+++
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM-RMGISPDVIT 256
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
++ +I + K A EM + V+P+++T+N+L++GL G +E +K+ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
K P+ +YN + G K+ + ++ L M + V D F+ N + +G+ G
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
A+K G + PD TF L+ LC+ G + A+ ++++ ++ VG +++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 350 DKLVSESMLSEA 361
L + +A
Sbjct: 437 KGLCKADKVEDA 448
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + D++ V+ +N ++ + Q + K + ++ ++PD+V+YN++I
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLI 226
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
S + + +L +M + G+SPD+ITF+ L+D EG+ E +K + +M ++++
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P+I +YN+ + GL + EA + L + K P+ + N +I G+ +D+ K
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
+ + D D T+ TL C+ G A V+ + + +++D L
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 355 ESMLSEA 361
+ +A
Sbjct: 407 HGKIGKA 413
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 132 LSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
++N L Y + ++ E++ + V PD+ ++N ++ C A+ LE
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMV-SCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
+++K+ +IT+N ++ GL + E+ L+ + K +SPD+ +Y ++GL ++
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Query: 252 KTGEAVEFLQEMEKKD 267
EA E ++M+K+D
Sbjct: 479 LWREAHELYRKMQKED 494
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 121/224 (54%), Gaps = 2/224 (0%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
FSA LI + K G A +++DEM +R+ + ++++L+ + + + +F+ +
Sbjct: 328 FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ P++V+YNT+IK FCK+K E + + EM + G+ + +T+NTL+ GL+ G
Sbjct: 387 ISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ +K++ +M + PDI +Y+ L GL K +A+ + ++K ++PD+++ N
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
+I+G G +++ F + P+ + T++ C KG
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C+ R+ + + D + R F +ID ++E +K Y + K +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
T L M R A+ MF+ M ++C V+++N L+ + +K+ +F+E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + + + V+YNT+I+ ++ + A + ++M +GV PD+IT++ LLDGL G
Sbjct: 421 M-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E+ ++ + + PDI +YN + G+ K + + + K VKP++
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
+I GF +G +EA F E+++ P+ T+ TL+ GD + +++KE+ +
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 337 RCRVGAPLLQLVVDKL 352
A + +V++ L
Sbjct: 600 GFVGDASTISMVINML 615
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM + +++ FN LL+A ++ +V + + + + + DL SYN +I
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ-NLRISYDLYSYNILI 122
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G PD++T ++LL+G R E L QM
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P+ ++N + GL + K EAV + M + +PDLF+ ++ G G++D A
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
++EK + + D + T++ LC ++ A+++ E+ N R
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 9/251 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL Y A + D+M ++FN L+ +LH+K
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V I + V +PDL +Y TV+ CK + A+S+L++MEK + D++ + T
Sbjct: 203 EAVALIDRMVAR--GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++D L + L+ +M K + P++ +YN+ + L + +A L +M ++
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ P++ + +A+I FV EG L EA+K + E+ K DPD T+++L+ C L A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 328 DVVKEIFNTRC 338
+ + + + C
Sbjct: 381 HMFELMISKDC 391
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 136/276 (49%), Gaps = 14/276 (5%)
Query: 109 SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISV 163
+G+ KR A + +M + V+ + ++ A + K +F E+ + +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GI 286
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+P++V+YN++I+ C + A +L +M + ++P+++TF+ L+D EG+ E EK
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L+ +M +++ PDI +Y++ + G + + EA + M KD P++ + N +IKGF
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
++E + F E+ + + T+ TL+ L + GD D+ ++IF G P
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD----CDMAQKIFKKMVSDGVP 462
Query: 344 ----LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++D L L +A + E + ++ P
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
S+N L+ + Q + + ++ ++ +PD+V+ ++++ +C K AV+++++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMM-KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M P+ +TFNTL+ GL+ + E L +M + PD+ +Y + GL
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
A+ L++MEK ++ D+ II N N+++A F E++ P+ T+ +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
L+ LC G A ++ ++ + ++D V E L EA+++ +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 35/214 (16%)
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE----EGEKL-------------- 224
+ AV + EM ++ P ++ FN LL + +F+ GE++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 225 -----------------WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
G+M PDI + ++ L G K+ EAV + +M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+P+ + N +I G EA + PD T+ T+V LC++GD+ A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
++K++ + + ++D L + +++A
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Query: 95 KEGFSARLIT------LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS---- 144
K G++ ++T Y K G K A ++ D M + V ++N L+ S
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
K Y ++ + K + + P+ V+YNT+I F A +L EM G+SP+ +T
Sbjct: 321 KGYLLLRDMRKRM-----IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
FN L+DG +EG F+E K++ M K L+P SY L GL + A F M+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+ V + +I G G LDEA E+ K DPD T++ L+ C+ G K
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
TA ++V I+ + ++ L EA I E
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +Y + GM + + ++F M +V + NA+L + + S + V KE+
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR- 227
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD+ ++N +I C FE + ++++MEK+G +P ++T+NT+L +GRF+
Sbjct: 228 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L M K + D+ +YN + L + + L++M K+ + P+ + N +I G
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
F NEG + A + E+ P+ TF L+ +G+ K A+
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF-KEVPGE 160
L+T KSG +A +F EM +R+ ++ +L++ L K V+ +F KE
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG-LCRKGKTVIAILFAKEAEAR 717
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+V P+ V Y + K+ +++ + E+M+ G +PD++T N ++DG G+ E+
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
L +MG +N P++ +YN L G + K + + + + PD + ++++
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
G L+ K + D+ TF L+ C G++ A D+VK
Sbjct: 838 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 37/302 (12%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI YG SG +A +FDEM + T ++ +LL R E+ K + +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA-V 647
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL--------- 212
D V YNT++ A CKS AVS+ EM + + PD T+ +L+ GL
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 213 ----------------------YAEGRFEEGEKLWG-----QMGGKNLSPDIRSYNARLL 245
+ +G F+ G+ G QM +PDI + NA +
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
G + K + + L EM ++ P+L + N ++ G+ ++ + + I + P
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
DK T +LV +CE L+ + ++K V +++ K + ++ A ++V
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Query: 366 EL 367
++
Sbjct: 888 KV 889
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 90 YSDFSKEGFSARLITLYG------KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
Y + G IT G K+G A + +EM + +++++AL+ +
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+++ + I + + + P+ + Y+T+I C+ + A+ + E M G + D
Sbjct: 491 VGRFKTAKEIVCRIY-RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
TFN L+ L G+ E E+ M + P+ S++ + G + +A EM
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
K P F+ +++KG G+L EA+K+ + D + TL+ +C+ G+L
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 324 KTAIDVVKEI 333
A+ + E+
Sbjct: 670 AKAVSLFGEM 679
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ PD+V+Y+ +I FCK F++A ++ + + G+SP+ I ++TL+ G +E
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+++ M + + D ++N + L K EA EF++ M + P+ S + +I G+
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA 342
N G +A F E+ K + P T+ +L+ LC+ G L+ A +K + V
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 343 PLLQLVVDKLVSESMLSEA 361
+ ++ + L++A
Sbjct: 654 VMYNTLLTAMCKSGNLAKA 672
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + G A Q+ +EM + ++FNAL+ ++ ++ ++F + +
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK- 402
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P VSY ++ CK+ F+ A M++NGV IT+ ++DGL G +E
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M + PDI +Y+A + G + A E + + + + P+ + +I
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G L EA + + + + D TF LV LC+ G + A
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 1/237 (0%)
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFE 184
R C ++ L+ YL + IF+ + G P + + N ++ + KS
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFR-LMGLYGFNPSVYTCNAILGSVVKSGEDV 215
Query: 185 SAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
S S L+EM K + PD+ TFN L++ L AEG FE+ L +M +P I +YN L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
+ + A+E L M+ K V D+ + N +I + + ++ K
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
P++ T+ TL+ +G + A ++ E+ + ++D +SE EA
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 19/310 (6%)
Query: 38 EVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRR--LAGAKQFRGVIDIL-------EHQK 88
EV+ L+D K + D R G Y R G + G+ID L E
Sbjct: 408 EVSYGVLLDGLCKNAEFDLAR---GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 89 QYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
++ SK+G ++T + K G K A+++ + + + ++ L+
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ RI++ + E + D ++N ++ + CK+ A + M +G+ P+
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
++F+ L++G G + ++ +M P +Y + L GL EA +FL+
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ D N ++ GNL +A FGE+ + PD T+ +L+ LC KG
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 323 LKTAIDVVKE 332
AI KE
Sbjct: 704 TVIAILFAKE 713
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+T K+G A + M +SF+ L+ Y +S + +F E+ ++
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KV 612
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P +Y +++K CK A L+ + + D + +NTLL + G +
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK-DVKPDLFSLNAIIK 280
L+G+M +++ PD +Y + + GL + KT A+ F +E E + +V P+ +
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G G + +++ + PD T ++ G ++ D++ E+ N
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--- 789
Query: 341 GAP 343
G P
Sbjct: 790 GGP 792
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 119/300 (39%), Gaps = 36/300 (12%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y + G ++ + EM +N + ++N LL Y K +++ +
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN- 823
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG----- 216
+ PD ++ ++++ C+S + E + +L+ GV D TFN L+ A G
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 217 ------------------------------RFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
RF+E + +M + +SP+ R Y + G
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L A +EM + P + +A+++ G DEA + K + P
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+F TL+ C+ G++ A+++ + N ++ +++ L ++ ++ A E+ E
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 159 GEISVKPDLVSYNTVI-----KAFCKSKV--------FESAVSMLEEMEKNGVSPDLITF 205
GEI+ DLV T + K C + V F+ + +L EM K G+SP+ +
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
L++GL G + + +M + P + +A + LA K EA L+ M K
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+ P + S ++ GN+ EA + + D ++ L+ LC KGD+
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057
Query: 326 AIDVVKEI 333
A ++ +E+
Sbjct: 1058 AFELYEEM 1065
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
SF L+ + + + ++ ++ +P +V++ +++ FC A S++
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMM-KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M K+G P+++ +NTL+DGL G +L +M K L D+ +YN L GL +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+A L++M K+ + PD+ + A+I FV +GNLDEA++ + E+ +S DP+ T+ +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 313 LVPFLCEKGDLKTA 326
++ LC G L A
Sbjct: 287 IINGLCMHGRLYDA 300
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G A ++ +EM ++ V+++N LL +S ++ R+ +++ S+ PD+
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDV 246
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V++ +I F K + A + +EM ++ V P+ +T+N++++GL GR + +K +
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K P++ +YN + G + E ++ Q M + D+F+ N +I G+ G
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
L A F + PD T L+ LC G++++A+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 11/317 (3%)
Query: 61 TGIYEDTVRRLAGAKQFRGVID--ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQM 118
TGI T AK FR V++ +L FS + +L T + S + A +
Sbjct: 7 TGIATST------AKGFRRVVNPNLLGGGAAARAFSD--YREKLRTGFLHSIRFEDAFAL 58
Query: 119 FDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC 178
F EM +++ F LL A + ++Y V F + + DL S+ +I FC
Sbjct: 59 FFEMVHSQPLPSIVDFTRLLTATANLRRYETVIY-FSQKMELYGISHDLYSFTILIHCFC 117
Query: 179 KSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
+ A+S+L +M K G P ++TF +LL G R + L M P++
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI 298
YN + GL + A+E L EMEKK + D+ + N ++ G G +A + ++
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 299 EKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESML 358
K +PD TF L+ ++G+L A ++ KE+ + +++ L L
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 359 SEAKEIVELGKTNRYHP 375
+AK+ +L + P
Sbjct: 298 YDAKKTFDLMASKGCFP 314
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+P++V YNT+I CK+ A+ +L EMEK G+ D++T+NTLL GL GR+ + +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ M ++++PD+ ++ A + + EA E +EM + V P+ + N+II G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
G L +AKK F + P+ T+ TL+ C+
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V+ +N L+ + + + + E+ + + D+V+YNT++ C S + A ML
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
+M K ++PD++TF L+D +G +E ++L+ +M ++ P+ +YN+ + GL +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ +A + M K P++ + N +I GF +DE K F + + D T+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 311 ATLVPFLCEKGDLKTAIDV 329
TL+ C+ G L+ A+D+
Sbjct: 355 NTLIHGYCQVGKLRVALDI 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 119/237 (50%), Gaps = 4/237 (1%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY-LHSKQYRVVERIFKE 156
F+A LI ++ K G A++++ EM + + +++N+++ +H + Y ++ F
Sbjct: 249 FTA-LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA-KKTFDL 306
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + P++V+YNT+I FCK ++ + + + + M G + D+ T+NTL+ G G
Sbjct: 307 MASK-GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ ++ M + ++PDI ++ L GL V + A+ +M + + + + N
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I G +++A + F + PD T+ ++ LC+ G + A ++++ +
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ + K M ++F M + ++N L+ Y + RV IF +
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR- 380
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD++++ ++ C + ESA+ ++M ++ ++ +N ++ GL + E+
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+L+ ++ + + PD R+Y +LGL EA E ++ M+++ +
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 135/257 (52%), Gaps = 1/257 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A +F+EM + T ++++N L+ + ++ ++ ++ +++ + P++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNV 333
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+++ +I +F K A + +EM G++PD IT+ +L+DG E ++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K P+IR++N + G + + +E ++M + V D + N +I+GF G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+ AK+ F E+ + P+ T+ L+ LC+ G+ + A+++ ++I ++ + + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 348 VVDKLVSESMLSEAKEI 364
++ + + S + +A ++
Sbjct: 514 IIHGMCNASKVDDAWDL 530
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K +A QM D M + C + +FN L+ Y + + +F+++
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR- 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V D V+YNT+I+ FC+ A + +EM V P+++T+ LLDGL G E+
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ ++ + DI YN + G+ K +A + + K VKP + + N +I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+G L EA+ F ++E+ + PD T+ L+ GD ++ +++E+ V
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 342 APLLQLVVDKL 352
A +++V+D L
Sbjct: 613 ASTIKMVIDML 623
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 90 YSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+++ +G + +IT + +G ++ +M +R V++F+ L+ +++
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+ R E + KE+ + PD ++Y ++I FCK + A M++ M G P++
Sbjct: 346 EGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
TFN L++G R ++G +L+ +M + + D +YN + G K A E QEM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
+ V P++ + ++ G + G ++A + F +IEKS+ + D + ++ +C +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 324 KTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAK 362
A D+ + + G +++ L + LSEA+
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + KSG A ++ +M ERN + ++ ++ +F E+ +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK- 292
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ ++++YN +I FC + ++ +L +M K ++P+++TF+ L+D EG+ E
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+L +M + ++PD +Y + + G E +A + + M K P++ + N +I G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ +D+ + F ++ D T+ TL+ CE G L A ++ +E+ + +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
++++D L +A EI E
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFE 497
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 34/284 (11%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK--EVPG------------- 159
A +F +M TV+ F+ L +A +KQY +V + K E+ G
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 160 -------------------EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
++ +P+ ++++T+I C A+ +++ M + G P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
DLIT NTL++GL G+ E L +M P+ +Y L + +T A+E L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++ME++++K D + II G G+LD A F E+E + T+ L+ C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
G +++++ + +++D V E L EA+E+
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 69 RRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCT 128
R+L A G I L ++ FS LI G A ++ D M E
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFST------LINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 129 RTVLSFNALLAAY-LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
+++ N L+ L K+ + I K V E +P+ V+Y V+ CKS A+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMV--EYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
+L +ME+ + D + ++ ++DGL G + L+ +M K ++ +I +YN + G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
+ + + L++M K+ + P++ + + +I FV EG L EA++ E+ PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
T+ +L+ C++ L A +V + + C
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K+ ++F +M R +++N L+ + + V + +F+E+
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR- 467
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P++V+Y ++ C + E A+ + E++EK+ + D+ +N ++ G+ + ++
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + K + P +++YN + GL + EA ++ME+ PD ++ N +I+
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ +G+ ++ K E+++ D +T ++ L + K+ +D++
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
S P RA +M + +++F +LL Y H + +F ++ G + KP++V
Sbjct: 131 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG-MGFKPNVV 189
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+Y T+I+ CK++ AV + +M NG P+++T+N L+ GL GR+ + L M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
+ + P++ ++ A + K EA E M + V PD+F+ ++I G G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
DEA++ F +E++ P++ + TL+ C+ ++ + + E+
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 137/319 (42%), Gaps = 1/319 (0%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
F+ Y +R L + +++ L+T + G A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+ +M +R V++F AL+ A++ + + ++ V ++SV PD+ +Y ++I
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY-NVMIQMSVYPDVFTYGSLING 302
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
C + + A M ME+NG P+ + + TL+ G R E+G K++ +M K + +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+Y + G + + A E +M + PD+ + N ++ G G +++A F
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSES 356
+ K E D + T+ ++ +C+ G ++ A D+ +F+ + ++
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 357 MLSEAKEIVELGKTNRYHP 375
++ EA + + K + + P
Sbjct: 483 LIHEADSLFKKMKEDGFLP 501
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 9/265 (3%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F M +++ F LL+ +Y VV +F+++ + + P L + N V+
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVM 125
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C S A L +M K G PDL+TF +LL+G R E+ L+ Q+ G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +Y + L + AVE +M +P++ + NA++ G G +A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP----LLQLVVD 350
++ K +P+ TF L+ + G L A KE++N ++ +++
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEA----KELYNVMIQMSVYPDVFTYGSLIN 301
Query: 351 KLVSESMLSEAKEIVELGKTNRYHP 375
L +L EA+++ L + N +P
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYP 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 82 DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
+++ Y D G + +YG + ARQMF M C + + L+ +
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYG---LLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
SK+ +IF E+ + V + ++Y +I+ +C + A + +M PD
Sbjct: 339 CKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
+ T+N LLDGL G+ E+ ++ M + + +I +Y + G+ K +A +
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ K +KP++ + +I GF G + EA F ++++ P+++ +
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
SY +++ + F A+ + M + P +I F LL + R++ L+ QM
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
+ P + + N + + + + A FL +M K +PDL + +++ G+ + +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++A F +I P+ T+ TL+ LC+ L A+++ ++
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL + A + D+M E ++F L+ + H+K
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V + + V +PDLV+Y VI CK + A+++L +MEK + D++ +NT
Sbjct: 198 EAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++DGL ++ L+ +M K + PD+ +YN + L + +A L +M +K+
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-PDKNTFATLVPFLCEKGDLKTA 326
+ PDL NA+I FV EG L EA+K + E+ KS++ PD + TL+ C+ ++
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 327 IDVVKEI 333
++V +E+
Sbjct: 376 MEVFREM 382
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ G A ++ +M E+N ++ FNAL+ A++ + E+++ E+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+V+YNT+IK FCK K E + + EM + G+ + +T+ TL+ G + +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ ++ QM + PDI +YN L GL A+ + M+K+D+K D+ + +I+
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
G +++ F + P+ T+ T++ C KG
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
++M + + +++ + + Q + I ++ ++ P +V+ N+++ FC
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM-KLGYGPSIVTLNSLLNGFCH 157
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
AV+++++M + G PD +TF TL+ GL+ + E L +M K PD+ +
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
Y A + GL + A+ L +MEK ++ D+ N II G ++D+A F ++E
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
PD T+ L+ LC G A ++ ++ ++D V E L
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 360 EAKEIV-ELGKTNRYHP 375
EA+++ E+ K+ P
Sbjct: 338 EAEKLYDEMVKSKHCFP 354
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F +M + +++ F+ LL+A ++ +V + +++ + + +L +Y+ I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSIFI 117
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G P ++T N+LL+G R E L QM
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD ++ + GL K EAV ++ M K +PDL + A+I G G D A
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++EK + + D + T++ LC+ + A D+ ++
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++ D+V YNT+I CK K + A + +ME G+ PD+ T+N L+ L GR+ +
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK-KDVKPDLFSLNAIIKG 281
+L M KN++PD+ +NA + E K EA + EM K K PD+ + N +IKG
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F ++E + F E+ + + T+ TL+ + D A V K++ +
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
+++D L + + A + E
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFE 450
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K + ++F EM +R +++ L+ + ++ + +FK++ +
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD- 420
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD+++YN ++ C + E+A+ + E M+K + D++T+ T+++ L G+ E+G
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + K + P++ +Y + G + EA EM++ P+ + N +I+
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ +G+ + + E+ D +TF + L
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
+ A+ + +M K+ P ++ F+ LL + +F+ L QM +S ++ +Y+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ + A+ L +M K P + +LN+++ GF + + EA ++ +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
PD TF TLV L + A+ +V+ + C+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + D+M +R C ++++ ++ + + ++ +K ++V +NT+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA-RIKANVVIFNTII 265
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ CK + E AV + EME G+ P+++T+N+L++ L GR+ + +L M K ++
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ ++NA + E K EA + +EM ++ + PD + N +I GF LDEAK+
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + + P+ T+ TL+ C+ ++ +++ +E+
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM + V+++N+L+ + ++ R+ + E + P++V++N +I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML-EKKINPNVVTFNALI 335
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
AF K A + EEM + + PD IT+N L++G R +E ++++ M K+
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P+I++YN + G K+ + VE +EM ++ + + + II+GF G+ D A+
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
F ++ + D T++ L+ LC G L TA+ + K
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQY 147
K G+ ++TL Y S A + D+M E +F L+ +LH+K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
V + + V + +PDLV+Y TV+ CK + A+++L +ME + +++ FNT
Sbjct: 206 EAVALVDQMV--QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
++D L E L+ +M K + P++ +YN+ + L + +A L M +K
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ P++ + NA+I F EG L EA+K E+ + DPD T+ L+ C L A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 328 DVVKEIFNTRC 338
+ K + + C
Sbjct: 384 QMFKFMVSKDC 394
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 136/311 (43%), Gaps = 2/311 (0%)
Query: 57 FRTKTGIYEDTVR-RLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRA 115
F + +G Y + +R RL+ + +D+ + F +L++ K +
Sbjct: 43 FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV 102
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK 175
+ ++M + + +++ + + Q + + ++ ++ +PD+V+ ++++
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLN 161
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
+C SK AV+++++M + G PD TF TL+ GL+ + E L QM + P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D+ +Y + GL A+ L +ME +K ++ N II +++ A F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSE 355
E+E P+ T+ +L+ LC G A ++ + + ++D E
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 356 SMLSEAKEIVE 366
L EA+++ E
Sbjct: 342 GKLVEAEKLHE 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFKKACDVDRF------RTKTGIYE--DTVRRLAGAKQFR 78
S S S D Y+E+ +L D K VD F R I E + +A +F
Sbjct: 42 SFASASGD-YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE 100
Query: 79 GVIDILEHQKQYSDFSKEGFSARL-ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
VI + E Q Q S + ++ + I + + A + +M + +++ ++L
Sbjct: 101 LVISLGE-QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 138 LAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG 197
L Y HSK+ + ++ E+ KPD ++ T+I AV+++++M + G
Sbjct: 160 LNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV 257
PDL+T+ T+++GL G + L +M + ++ +N + L + AV
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 258 EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ EME K ++P++ + N++I N G +A + + + + +P+ TF L+
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 318 CEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
++G L A + +E+ L+++ + L EAK++
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A ++ +EM +R+ +++N L+ + + +++FK + +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK- 392
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P++ +YNT+I FCK K E V + EM + G+ + +T+ T++ G + G +
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-------------- 267
+ ++ QM + DI +Y+ L GL K A+ + ++K +
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 268 ------------------VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+KPD+ + N +I G ++ L EA F ++++ P+ T
Sbjct: 513 MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
+ TL+ D + +++KE+ ++ A + LV + L
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/222 (17%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K + ++F EM +R +++ ++ + + + +FK++
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN- 462
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAV-------------------SMLEEMEKNG----- 197
V D+++Y+ ++ C ++A+ +M+E M K G
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 198 --------VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+ PD++T+NT++ GL ++ +E + L+ +M P+ +YN +
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
+ + E ++EM D ++ +++ +++G LD++
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 129/259 (49%), Gaps = 1/259 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G K A Q+FDEM ER + ++++N L+ + ++ ++ + + P+L
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNL 338
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++YNT+I FC A+S+ +++ G+SP L+T+N L+ G +G K+ +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + + P +Y + A +A++ ME+ + PD+ + + +I GF +G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
++EA + F + + +P++ + T++ C++G A+ ++KE+ +
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 348 VVDKLVSESMLSEAKEIVE 366
+++ L E EA+ +VE
Sbjct: 519 MIEVLCKERKSKEAERLVE 537
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 123/237 (51%), Gaps = 1/237 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K+G+ K+ +M+++M E + ++N ++ + + ++F E+ E
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR-ER 297
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V ++V+YNT+I C+ A ++++M+ +G++P+LIT+NTL+DG G+ +
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L + + LSP + +YN + G + T A + ++EME++ +KP + +I
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
F N+++A + +E+ PD +T++ L+ C KG + A + K + C
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
++G +++ + E+ E + V+ + L+ + + +F E+ G++ + +
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANE 233
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+Y +I K+ V + M E+M+++GV P+L T+N +++ L +GR ++ +++ +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + +S +I +YN + GL E K EA + + +M+ + P+L + N +I GF G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
L +A +++ P T+ LV C KGD A +VKE+
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEM------PERNCTRTVLSFNALLAAYLHSKQYRVVERIFK 155
+I Y +S + F+EM P NC FN LL + S + F
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNC------FNYLLTFVVGSSSFNQWWSFFN 153
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
E ++ + D+ S+ +IK C++ E + +L E+ + G SP+++ + TL+DG +
Sbjct: 154 ENKSKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G E+ + L+ +MG L + R+Y + GL + E ++M++ V P+L++
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N ++ +G +A + F E+ + + T+ TL+ LC + L A VV ++
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
GM + A Q F +M S N LL + + V+R FK++ G +P + +
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFT 264
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YN +I CK E+A + EEM+ G+ PD +T+N+++DG GR ++ + +M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
PD+ +YNA + K +EF +EM+ +KP++ S + ++ F EG +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
+A K++ ++ + P++ T+ +L+ C+ G+L A + E+ ++
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 350 DKLVSESMLSEAKEI 364
D L + EA+E+
Sbjct: 445 DGLCDAERMKEAEEL 459
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +GK G F+EM + C V+++NAL+ + + + ++E+ G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN- 361
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP++VSY+T++ AFCK + + A+ +M + G+ P+ T+ +L+D G +
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L +M + ++ +Y A + GL ++ EA E +M+ V P+L S NA+I G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
FV N+D A + E++ PD + T + LC ++ A V+ E+
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y KSG P + DEM E + TV++F L+ +K F + +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ + + +I CK E+A ++ E+M + G+ PD + +L+DG + +G E
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M + D+ +Y + + GL+ + +A FL+EM + + PD +++K
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 282 FVNEGNLDEA 291
G +DEA
Sbjct: 728 HYELGCIDEA 737
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ L+ + K GM ++A + + +M ++ +L+ A R+ E+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML- 429
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ V+ ++V+Y +I C ++ + A + +M+ GV P+L ++N L+ G +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+L ++ G+ + PD+ Y + GL +K A + EM++ +K + ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT-RC 338
+ GN E E+++ + + TF L+ LC+ + A+D I N
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ A + ++D L ++ + A + E
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFE 637
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 105 LYGKSGMPK--RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
++G + K A+ + +EM E L + L+ AY S + E+ E+
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK-ELD 572
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEG 221
++ +V++ +I CK+K+ AV + + G+ + F ++DGL + + E
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ QM K L PD +Y + + G + EA+ +M + +K DL + +++ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDK 307
+ L +A+ + E+ PD+
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDE 718
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM---------------EKN 196
+ FK K + SY V ++++ A S+L+EM +N
Sbjct: 127 KFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRN 186
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
P F+ L L G EE + + +M + P RS N L A KT +
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
F ++M +P +F+ N +I EG+++ A+ F E++ PD T+ +++
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 317 LCEKGDLKTAIDVVKEIFNTRC 338
+ G L + +E+ + C
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCC 328
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y +G P +A ++F M E C + + SFN +L SK+ +F+ + G SV
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-- 193
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V+YN ++ +C K A+ +L+EM + G++P+L T+NT+L G + G+ + +
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M ++ D+ +Y + G V + A EM ++ V P + + NA+I+ +
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
N++ A F E+ + +P+ T+ L+ L G+ ++++ + N C
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
+LH + ++ R+ + + P ++ V + + + + AV + M ++G
Sbjct: 105 HLHPTVWSLIHRM-----RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ 159
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
DL +FNT+LD L R E+ +L+ + G+ S D +YN L G + K+T +A+E L
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
+EM ++ + P+L + N ++KGF G + A ++F E++K + + D T+ T+V
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 321 GDLKTAIDVVKEI 333
G++K A +V E+
Sbjct: 279 GEIKRARNVFDEM 291
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
F+A +I ++ K G A ++++EM R V ++N+L+ + +++ +
Sbjct: 247 FTA-VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ PD+V+YNT+I FCKSK + + EM + G+ D IT+NT++ G + GR
Sbjct: 306 VTK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ ++++ +M + P+IR+Y+ L GL + + +A+ + M+K +++ D+ + N
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
+I G GN+++A F + PD ++ T++ C K
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G+ A ++FD M +++N+L+A S ++ R+ +++ + P++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNV 244
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+++ VI F K F A+ + EEM + V PD+ T+N+L++GL GR +E +++
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K PD+ +YN + G K+ E + +EM ++ + D + N II+G+ G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
D A++ F ++ P+ T++ L+ LC ++ A+
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 91/160 (56%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ +PD+V YNT+I CK + AV + + ME++GV D +T+N+L+ GL GR+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ +L M +++ P++ ++ A + E K EA++ +EM ++ V PD+F+ N++I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
G G +DEAK+ + PD T+ TL+ C+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+F M + S+N ++ ++ + + ++ + +PD+V+ +++I
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLING 148
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
FC+ A+ ++ +ME+ G PD++ +NT++DG G + +L+ +M + D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+YN+ + GL + +A +++M +D+ P++ + A+I FV EG EA K +
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
E+ + DPD T+ +L+ LC G + A
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V+ D V+YN+++ C S + A ++ +M + P++ITF ++D EG+F E
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
KL+ +M + + PD+ +YN+ + GL + + EA + L M K PD+ + N +I GF
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+DE K F E+ + D T+ T++ + G D +EIF+
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG----RPDAAQEIFS 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P +V ++ V+ KSK ++ +S+ ME G+ DL ++N +++ L RF +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
G+M PD+ + ++ + G + +A++ + +ME+ +PD+ N II G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
G +++A + F +E+ D T+ +LV LC G A +++++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 345 LQLVVDKLVSESMLSEAKEIVE 366
V+D V E SEA ++ E
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYE 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + KS ++F EM +R +++N ++ Y + + + IF +
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-- 377
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+P++ +Y+ ++ C + E A+ + E M+K+ + D+ T+N ++ G+ G E+
Sbjct: 378 --RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
L+ + K L PD+ SY + G +++ ++ ++M++ + P
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K +A M D M + C + +FN L+ Y + +F+++
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR- 416
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V D V+YNT+I+ FC+ E A + +EM V PD++++ LLDGL G E+
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ ++ + DI YN + G+ K +A + + K VKPD+ + N +I G
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+G+L EA F ++E+ + P+ T+ L+ +GD + +++EI V
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 342 APLLQLVVDKL 352
A +++VVD L
Sbjct: 597 ASTVKMVVDML 607
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 130/257 (50%), Gaps = 1/257 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A +F+EM + ++ + L+ + ++ ++ ++ +++ + PD+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDV 317
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+++ +I F K A + +EM + G+SPD +T+ +L+DG E + ++ +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K P+IR++N + G + +E ++M + V D + N +I+GF G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
L+ AK+ F E+ PD ++ L+ LC+ G+ + A+++ ++I ++ + + +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 348 VVDKLVSESMLSEAKEI 364
++ + + S + +A ++
Sbjct: 498 IIHGMCNASKVDDAWDL 514
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI-SVKPD 166
KSG A ++ +M ER + ++ ++ +F E+ EI K D
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM--EIKGFKAD 281
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++ Y T+I+ FC + ++ +L +M K ++PD++ F+ L+D EG+ E E+L
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+M + +SPD +Y + + G E + +A L M K P++ + N +I G+
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
+D+ + F ++ D T+ TL+ CE G L+ A ++ +E+ + R R +
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 347 LVVDKLVSESMLSEAKEIVE 366
+++D L +A EI E
Sbjct: 462 ILLDGLCDNGEPEKALEIFE 481
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 3/256 (1%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAY-LHSKQYRVVERIFKEVPGEISVKPDLV 168
G A ++ D M E T+++ NAL+ L+ K V I + V E +P+ V
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGFQPNEV 213
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+Y V+K CKS A+ +L +ME+ + D + ++ ++DGL +G + L+ +M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
K DI Y + G + + + L++M K+ + PD+ + +A+I FV EG L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLV 348
EA++ E+ + PD T+ +L+ C++ L A ++ + + C ++
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 349 VDKLVSESMLSEAKEI 364
++ +++ + E+
Sbjct: 394 INGYCKANLIDDGLEL 409
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K+ + ++F +M R +++N L+ + + V + +F+E+
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR- 451
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+PD+VSY ++ C + E A+ + E++EK+ + D+ +N ++ G+ + ++
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + K + PD+++YN + GL + EA ++ME+ P+ + N +I+
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ EG+ ++ K EI++ D +T +V L + K+ +D++
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F EM ++ F+ L + +KQY +V + K++ + + +L + + +I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYTLSIMI 114
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C+ + A S + ++ K G PD +TF+TL++GL EGR E +L +M
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 235 PDIRSYNARLLGLAVEKKTGEAV-----------------------------------EF 259
P + + NA + GL + K +AV E
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
L++ME++ +K D + II G +G+LD A F E+E D + TL+ C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 320 KGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
G +++++ + ++D V E L EA+E+
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ KP L++ N ++ C + AV +++ M + G P+ +T+ +L + G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+L +M + + D Y+ + GL + A EME K K D+ +I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
+GF G D+ K ++ K + PD F+ L+ ++G L+ A ++ KE+
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVEL 367
++D E+ L +A +++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDL 377
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDIL-EHQKQYSDFSKEGFSARLITLYGKSGMPKRA 115
F+ Y + +L +F + ++L + ++ + EG + YG+ G + A
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK 175
+F+ M +C TV S+NA+++ + S + +++ + + + PD+ S+ +K
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR-DRGITPDVYSFTIRMK 154
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
+FCK+ +A+ +L M G +++ + T++ G Y E EG +L+G+M +S
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
+ ++N L L + E + L ++ K+ V P+LF+ N I+G G LD A +
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G + + PD T+ L+ LC+ + A
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 9/235 (3%)
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY----RVVERIFKE 156
+L+ + K G K ++ D++ +R + ++N + + R+V + ++
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
P KPD+++YN +I CK+ F+ A L +M G+ PD T+NTL+ G G
Sbjct: 281 GP-----KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E++ G PD +Y + + GL E +T A+ E K +KP++ N
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+IKG N+G + EA + E+ + P+ TF LV LC+ G + A +VK
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI GM A Q+ +EM E+ V +FN L+ + + K + +
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK- 455
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+ ++N +I + E+A+ +L+ M NGV PD+ T+N+LL+GL +FE+
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + M K +P++ ++N L L +K EA+ L+EM+ K V PD + +I G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 282 FVNEGNLDEAKKWFGEIEK----SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
F G+LD A F ++E+ S + P T+ ++ EK ++ A + +E+ + R
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVD-R 631
Query: 338 C 338
C
Sbjct: 632 C 632
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 8/248 (3%)
Query: 90 YSDFSKEGFSAR-LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
++ F + F+ R LI G RA +F+E + V+ +N L+ S Q
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL--SNQGM 406
Query: 149 VVERIFKEVPGEISVK---PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
++E ++ E+S K P++ ++N ++ CK A +++ M G PD+ TF
Sbjct: 407 ILEA--AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N L+ G + + E ++ M + PD+ +YN+ L GL K + +E + M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
K P+LF+ N +++ LDEA E++ +PD TF TL+ C+ GDL
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 326 AIDVVKEI 333
A + +++
Sbjct: 585 AYTLFRKM 592
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 130/271 (47%), Gaps = 10/271 (3%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY----LHSKQYRVVERI 153
F+ R+ + + K+ P A ++ + M + C V+++ ++ + ++ Y + ++
Sbjct: 149 FTIRMKS-FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
V L ++N +++ CK + +L+++ K GV P+L T+N + GL
Sbjct: 208 LAS-----GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
G + ++ G + + PD+ +YN + GL K EA +L +M + ++PD +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ N +I G+ G + A++ G+ + PD+ T+ +L+ LC +G+ A+ + E
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ L ++ L ++ M+ EA ++
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
++N L+A Y ++ ERI + V PD +Y ++I C A+++ E
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
G+ P++I +NTL+ GL +G E +L +M K L P+++++N + GL
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+A ++ M K PD+F+ N +I G+ + ++ A + + + DPD T+ +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNR 372
L+ LC+ + ++ K + C ++++ L L EA ++E K
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 373 YHP 375
+P
Sbjct: 562 VNP 564
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K GM + A ++ + ++ +L+ H + +F E G+
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK- 385
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP+++ YNT+IK + A + EM + G+ P++ TFN L++GL G +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L M K PDI ++N + G + + K A+E L M V PD+++ N+++ G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
++ + + + + P+ TF L+ LC L A+ +++E+ N
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 342 APLLQLVVDKLVSESMLSEA 361
A ++D L A
Sbjct: 566 AVTFGTLIDGFCKNGDLDGA 585
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 103 ITLYGKSGMPK--RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
I ++G S K A ++ D M + V ++N+LL + ++ V +K + E
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV-E 524
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
P+L ++N ++++ C+ + + A+ +LEEM+ V+PD +TF TL+DG G +
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 221 GEKLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
L+ +M +S +YN + + A + QEM + + PD ++ ++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV---------V 330
GF GN++ K+ E+ ++ P T ++ LC + + A + V
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 331 KEIFNTRC-----RVGAPLLQLVVDKLVSESMLS 359
E NT C V AP +LV++ L+ +S ++
Sbjct: 705 PEAVNTICDVDKKEVAAP--KLVLEDLLKKSCIT 736
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 186 AVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG---GKNLSPDIRSYN 241
A+ M M K G L T+ ++++ L G+FE E++ M G ++ + Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--YV 80
Query: 242 ARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+ + K EAV + M+ D +P +FS NAI+ V+ G D+A K + +
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 302 ENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
PD +F + C+ A+ ++ + + C + VV E+ +E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 362 KEI 364
E+
Sbjct: 201 YEL 203
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI ++ + G A EM + +V +N+L+ + E E+ +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK- 466
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++P +V+Y +++ +C A+ + EM G++P + TF TLL GL+ G +
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL+ +M N+ P+ +YN + G E +A EFL+EM +K + PD +S +I G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G EAK + + K + ++ + L+ C +G L+ A+ V +E+
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 114 RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
RA++M M C ++ +N L+ ++ I K++ G+ +KPD+V+Y T+
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVVTYCTL 303
Query: 174 IKAFCKSKVFESAVSMLEEM-----------------------------------EKNGV 198
+ CK + FE + M++EM GV
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
SP+L +N L+D L +F E E L+ +MG L P+ +Y+ + K A+
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
FL EM +K ++ N++I G G++ A+ + E+ + +P T+ +L+ C
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 319 EKGDLKTAIDVVKEI 333
KG + A+ + E+
Sbjct: 484 SKGKINKALRLYHEM 498
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 27/344 (7%)
Query: 38 EVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSK-E 96
+V L+D F + +D + G DT +L+ + +I+ ++ D S E
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS-VYPYNSLIN---GHCKFGDISAAE 457
Query: 97 GFSARLITL---------------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
GF A +I Y G +A +++ EM + ++ +F LL+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
+ R ++F E+ E +VKP+ V+YN +I+ +C+ A L+EM + G+ PD
Sbjct: 518 FRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
++ L+ GL G+ E + + N + Y L G E K EA+ Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN---DPDKNTFATLVPFLC 318
EM ++ V DL +I G + + K +FG +++ + PD + +++
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKH---KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 319 EKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAK 362
+ GD K A + + N C V++ L ++EA+
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +FD M + ++++ L+ + + E+ + +K + YN++I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV-DTGLKLSVYPYNSLI 444
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
CK +A + EM + P ++T+ +L+ G ++G+ + +L+ +M GK ++
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P I ++ L GL +AV+ EM + +VKP+ + N +I+G+ EG++ +A ++
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
E+ + PD ++ L+ LC G A V + C + ++
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 355 ESMLSEAKEIVE 366
E L EA + +
Sbjct: 625 EGKLEEALSVCQ 636
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V + +ALL + + + + +F ++ + ++PD+ Y VI++ C+ K A M+
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLA-- 248
ME G +++ +N L+DGL + + E + + GK+L PD+ +Y + GL
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 249 ----------------------------VE--KKTG---EAVEFLQEMEKKDVKPDLFSL 275
VE +K G EA+ ++ + V P+LF
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
NA+I EA+ F + K P+ T++ L+ C +G L TA+ + E+ +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 336 T 336
T
Sbjct: 431 T 431
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 35/209 (16%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT--------------- 204
+ V P+L YN +I + CK + F A + + M K G+ P+ +T
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 205 --------------------FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
+N+L++G G E +M K L P + +Y + +
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
G + K +A+ EM K + P +++ ++ G G + +A K F E+ +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
P++ T+ ++ CE+GD+ A + +KE+
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+YN +I+ FC+ E A ++ M +GVSPD IT+ T+++ L ++ +LW M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
K + PD +YN + G V + G+A E EM ++ + P+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 36/256 (14%)
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
+G A+ D + + NC + + LL + + + +E+ + V DLV
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV-QRGVDLDLV 648
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
Y +I K K + +L+EM G+ PD + + +++D G F+E +W M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF--------------- 273
+ P+ +Y A + GL EA +M+ P+
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 274 --------------------SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+ N +I+GF +G ++EA + + PD T+ T+
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 314 VPFLCEKGDLKTAIDV 329
+ LC + D+K AI++
Sbjct: 829 INELCRRNDVKKAIEL 844
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I K+G K A ++D M C +++ A++ + E + ++ +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ-PV 746
Query: 162 SVKPDLVSYNTVIKAFCKSKV-FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
S P+ V+Y + K +V + AV + + K G+ + T+N L+ G +GR EE
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEE 805
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+L +M G +SPD +Y + L +A+E M +K ++PD + N +I
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
G G + +A + E+ + P+ T T
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 96/202 (47%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
F+ L+ Y+ S++ +FK + ++S+ P++ + + ++ K + F A+ + +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
G+ PD+ + ++ L +++ M +I YN + GL ++K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
EAV +++ KD+KPD+ + ++ G + + E+ P + ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 314 VPFLCEKGDLKTAIDVVKEIFN 335
V L ++G ++ A+++VK + +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVD 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + + G + A + EM +R ++ + L+ L K ++ + KE+
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR- 676
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KPD V Y ++I A K+ F+ A + + M G P+ +T+ +++GL G E
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 222 EKLWGQMGG-----------------------------------KNLSPDIRSYNARLLG 246
E L +M K L + +YN + G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ + EA E + M V PD + +I ++ +A + + + + PD
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+ + TL+ C G++ A ++ E+
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEML 884
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 151/316 (47%), Gaps = 16/316 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C+ R+ + + D + R F +ID ++E +K Y + K +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
T L M R A+ MF+ M ++C V+++N L+ + +K+ +F+E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + + + V+Y T+I F +++ ++A + ++M +GV PD++T++ LLDGL G
Sbjct: 422 M-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E ++ + + PDI +YN + G+ K + + + K VKP++ +
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
++ GF +G +EA F E+++ PD T+ TL+ GD + ++++E+ +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 337 RCRVGAPLLQLVVDKL 352
R A + LV + L
Sbjct: 601 RFVGDASTIGLVTNML 616
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
++M + + +++ L+ + Q + + ++ ++ +PD+V+ N+++ FC
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCH 163
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
AVS++ +M + G PD TFNTL+ GL+ R E L +M K PD+ +
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
Y + GL A+ L++ME+ ++P + N II N N+++A F E++
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
P+ T+ +L+ LC G A ++ ++ + ++D V E L
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 360 EAKEIVE 366
EA+++ +
Sbjct: 344 EAEKLYD 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + D M + C ++++ ++ + + K++ + ++P +V YNT+I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME-QGKIEPGVVIYNTII 263
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
A C K A+++ EM+ G+ P+++T+N+L+ L GR+ + +L M + ++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +++A + E K EA + EM K+ + PD+F+ +++I GF LDEAK
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + + P+ T+ TL+ C+ + +++ +E+
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
A + +M E +FN L+ + H++ V + + V +PDLV+Y V
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK--GCQPDLVTYGIV 227
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
+ CK + A+S+L++ME+ + P ++ +NT++D L + L+ +M K +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P++ +YN+ + L + +A L +M ++ + P++ + +A+I FV EG L EA+K
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ E+ K DPD T+++L+ C L A + + + + C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 140/287 (48%), Gaps = 9/287 (3%)
Query: 96 EGFSARLITLYG--KSGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
+G L+T YG +G+ KR A + +M + V+ +N ++ A + K
Sbjct: 215 KGCQPDLVT-YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
+F E+ + ++P++V+YN++I+ C + A +L +M + ++P+++TF+ L
Sbjct: 274 DALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+D EG+ E EKL+ +M +++ PDI +Y++ + G + + EA + M KD
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
P++ + N +IKGF +DE + F E+ + + T+ TL+ + + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 329 VVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V K++ + +++D L + + A + E + ++ P
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P +V ++ ++ A K F+ +S+ E+M+ G+S +L T++ L++ + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M PDI + N+ L G + +AV + +M + +PD F+ N +I G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
EA + PD T+ +V LC++GD+ A+ ++K++ + G +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 345 LQLVVDKLVSESMLSEA 361
++D L + +++A
Sbjct: 259 YNTIIDALCNYKNVNDA 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%)
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
+ AV++ +M K+ P ++ F+ LL + +F+ L QM +S ++ +Y+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ + A+ L +M K +PD+ +LN+++ GF + + +A G++ +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
PD TF TL+ L A+ +V + C+ +VV+ L
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 157/362 (43%), Gaps = 38/362 (10%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF 98
+N+ ++ F + +R +Y+ + +L +F+ + +L K KE
Sbjct: 89 LNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL 148
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERN---CTRTVLSFNALLAAYLHSKQYRVVERIFK 155
++ Y K+G P + ++ EM RN C T S+N +L + ++V +F
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
++ + P L ++ V+KAFC +SA+S+L +M K+G P+ + + TL+ L
Sbjct: 207 DMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM------------ 263
R E +L +M PD ++N +LGL + EA + + M
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 264 --------------EKKDV-----KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
KD+ KP++ N +I GFV G LD+AK ++ S
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 305 -PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
PD T+ +L+ ++G + A++V+ ++ N C+ ++VD + EA
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 364 IV 365
++
Sbjct: 446 VL 447
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 2/236 (0%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
GF+ LI+ + K A ++F EMP + C V +FN+L++ + + + ++
Sbjct: 461 GFNC-LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ E V + V+YNT+I AF + + A ++ EM G D IT+N+L+ GL G
Sbjct: 520 MISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
++ L+ +M +P S N + GL EAVEF +EM + PD+ + N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
++I G G +++ F +++ PD TF TL+ +LC+ G + A ++ E
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 16/278 (5%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYG-------KSGMPKRARQMFDEMPERNCTRTVLSFN 135
I E K + GF+ IT YG K G A+ +F +P+ ++ FN
Sbjct: 303 INEAAKMVNRMLIRGFAPDDIT-YGYLMNGLCKIGRVDAAKDLFYRIPKPE----IVIFN 357
Query: 136 ALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
L+ ++ + + + ++ + PD+ +YN++I + K + A+ +L +M
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
G P++ ++ L+DG G+ +E + +M L P+ +N + E + E
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
AVE +EM +K KPD+++ N++I G + A ++ + T+ TL+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 316 FLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
+G++K A +V E+ G+PL ++ + L+
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQ----GSPLDEITYNSLI 571
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +M + M R +++ L+ + + +F +P KP++V +NT+I
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLI 360
Query: 175 KAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
F + A ++L +M + G+ PD+ T+N+L+ G + EG ++ M K
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P++ SY + G K EA L EM +KP+ N +I F E + EA +
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
F E+ + PD TF +L+ LCE ++K A+ +++++ + +++ +
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 354 SESMLSEAKEIV 365
+ EA+++V
Sbjct: 541 RRGEIKEARKLV 552
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 13/248 (5%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V ++N+L+ Y + + ++ + KP++ SY ++ FCK + A ++L
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
EM +G+ P+ + FN L+ E R E +++ +M K PD+ ++N+ + GL
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ A+ L++M + V + + N +I F+ G + EA+K E+ + D+ T+
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG-AP---LLQLVVDKLVSESMLSEA----K 362
+L+ LC G+ +D + +F R G AP ++++ L M+ EA K
Sbjct: 568 NSLIKGLCRAGE----VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 363 EIVELGKT 370
E+V G T
Sbjct: 624 EMVLRGST 631
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + + G K AR++ +EM + +++N+L+ + + +F+++ +
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD- 593
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P +S N +I C+S + E AV +EM G +PD++TFN+L++GL GR E+G
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ ++ + + PD ++N + L +A L E + P+ + + +++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 282 FVNEGNLD 289
+ + LD
Sbjct: 714 IIPQETLD 721
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 2/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y KS + K A + ++M ER V+++N+L+ S + R+ + +
Sbjct: 434 LIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDR 491
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD +Y ++I + CKSK E A + + +E+ GV+P+++ + L+DG G+ +E
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +M KN P+ ++NA + GL + K EA ++M K ++P + + +I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ +G+ D A F ++ S PD +T+ T + C +G L A D++ ++
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K GM + A + + M R + ++N L+ Y S ++ + + K + E
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML--ER 456
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD+V+YN++I C+S F+SA +L M G+ PD T+ +++D L R EE
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + K ++P++ Y A + G K EA L++M K+ P+ + NA+I G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+G L EA ++ K P +T L+ L + GD A +++ ++ +
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A + E L +A++++ + N P
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F+EMP + C R +++ L+ +++ +F ++ + P + +Y +I
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVRTYTVLI 330
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
K+ C S+ A+++++EME+ G+ P++ T+ L+D L ++ +FE+ +L GQM K L
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +YNA + G +AV+ ++ ME + + P+ + N +IKG+ + N+ +A
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGV 449
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
++ + + PD T+ +L+ C G+ +A
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 118/247 (47%), Gaps = 14/247 (5%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL------HSKQYRVV 150
G L+ + G+ +Q++ EM E + ++N ++ Y + QY V
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY--V 241
Query: 151 ERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
+I E + PD +Y ++I +C+ K +SA + EM G + + + L+
Sbjct: 242 SKIV-----EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
GL R +E L+ +M P +R+Y + L ++ EA+ ++EME+ +KP
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
++ + +I ++ ++A++ G++ + P+ T+ L+ C++G ++ A+DVV
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 331 KEIFNTR 337
E+ +R
Sbjct: 417 -ELMESR 422
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +SG A ++ M +R ++ +++ + SK+ +F + +
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK- 526
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P++V Y +I +CK+ + A MLE+M P+ +TFN L+ GL A+G+ +E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M L P + + + L + A Q+M KPD + I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ EG L +A+ ++ ++ PD T+++L+ + G A DV+K + +T C
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KS + A +FD + ++ V+ + AL+ Y + + + +++ + + P+
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNS 567
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+++N +I C + A + E+M K G+ P + T L+ L +G F+ + Q
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M PD +Y + E + +A + + +M + V PDLF+ +++IKG+ + G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
+ A + + +P ++TF +L+ L E
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ K + YNT++ + + + + + EM ++ V P++ T+N +++G G E
Sbjct: 176 ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE 235
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E + ++ L PD +Y + ++G K A + EM K + + + +I
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G +DEA F +++ E P T+ L+ LC A+++VKE+ T +
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIV 365
+++D L S+ +A+E++
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELL 381
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E V P++ +YN ++ +CK E A + ++ + G+ PD T+ +L+ G +
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
K++ +M K + +Y + GL V ++ EA++ +M+ + P + + +I
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
K EA E+E++ P+ +T+ L+ LC + + A +++ ++
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+++ M+ +A ++VEL ++ + P
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y + G K+A + DEM T ++ +L+ + R + +F++V G+
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK- 461
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KPDLV NT++ C + A S+L+EM+ ++PD +T+N L+ GL EG+FEE
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L G+M + + PD SYN + G + + T A EM P L + NA++KG
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ A++ E++ P+ ++F +++
Sbjct: 582 LSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
DEM ++ T ++N L+ + E + +E+ E + D V+YN +I +C+
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR-EKGIVLDSVTYNILINGYCQ 409
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
+ A ++ +EM +G+ P T+ +L+ L + + E ++L+ ++ GK + PD+
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
N + G A L+EM+ + PD + N +++G EG +EA++ GE++
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+ PD ++ TL+ +KGD K A V E+ +
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 57/326 (17%)
Query: 53 DVDRFRTKTGIYEDTVR--------RLAGAKQFRGVIDILEHQKQYSDFSK--EGFSARL 102
D+ R K+ +Y + +L AK F G++++ + ++ +GFS R
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR- 273
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
G + AR + EM + + ++N +L+ + + V R KE I
Sbjct: 274 -------GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE----IG 322
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ PD VSYN +I+ + E A + +EM K G+ P T+NTL+ GL+ E + E E
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 223 KLWGQMGGKNLSPDIRSYNARLLG-----------------------------------L 247
L ++ K + D +YN + G L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
+ KT EA E +++ K +KPDL +N ++ G GN+D A E++ +PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEI 333
T+ L+ LC +G + A +++ E+
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEM 528
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + E+ E+ +++N L+ Y + + E+ + ++P +Y ++I
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD-GIQPTQFTYTSLI 439
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C+ A + E++ G+ PDL+ NTL+DG A G + L +M +++
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD +YN + GL E K EA E + EM+++ +KPD S N +I G+ +G+ A
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E+ +P T+ L+ L + + + A ++++E+
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%)
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+ ++ +++ C+ ++ + A+ M++ G P T N +L L R E +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M + ++ ++N + L E K +A FL ME +KP + + N +++GF G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++ A+ E++ PD T+ ++ ++C +G + +KEI
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 116 RQMFDEM---PERNCTRTVLSFNALLAAYLHSKQYRVVERIFK--EVPGEISVKPDLVSY 170
R +FDE+ +R T++ + F+ L+ Q R+V+ + + E P +
Sbjct: 137 RNLFDELVLAHDRLETKSTILFDLLVRC---CCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N ++ + E+A +M + + ++ TFN +++ L EG+ ++ + G M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
+ P I +YN + G ++ + A + EM+ K +PD+ + N I+ NEG E
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE 313
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+ EI PD ++ L+ GDL+ A
Sbjct: 314 VLREMKEIGLV---PDSVSYNILIRGCSNNGDLEMA 346
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 1/226 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
I YGKSG A + F++M + +++ NA L + + + R ++IF + +I
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK-DI 497
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD V+YN ++K + K + A+ +L EM +NG PD+I N+L++ LY R +E
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K++ +M L P + +YN L GL K EA+E + M +K P+ + N +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ A K ++ PD T+ T++ L + G +K A+
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 115/224 (51%), Gaps = 3/224 (1%)
Query: 92 DFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVV 150
DFS + LI KSG A+Q+F+ M + C +N L+ + + +
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 151 ERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
+FK + E V+PDL +Y+ ++ C + + +E++++G++PD++ +N +++
Sbjct: 946 CALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 211 GLYAEGRFEEGEKLWGQM-GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
GL R EE L+ +M + ++PD+ +YN+ +L L + EA + E+++ ++
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 270 PDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
P++F+ NA+I+G+ G + A + + P+ T+ L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 106/197 (53%), Gaps = 2/197 (1%)
Query: 119 FDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC 178
+D M +R+ + T ++ L+ S + +++F+ + + +P+ YN +I F
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCRPNCAIYNILINGFG 937
Query: 179 KSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
K+ ++A ++ + M K GV PDL T++ L+D L GR +EG + ++ L+PD+
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEME-KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
YN + GL + EA+ EM+ + + PDL++ N++I G ++EA K + E
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 298 IEKSENDPDKNTFATLV 314
I+++ +P+ TF L+
Sbjct: 1058 IQRAGLEPNVFTFNALI 1074
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G K+A +M E S+N L+ L S+ +++ + E +P L +
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQT 225
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y++++ K + +S + +L+EME G+ P++ TF + L G+ E ++ +M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ PD+ +Y + L +K A E ++M+ KPD + ++ F + +LD
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
K+++ E+EK + PD TF LV LC+ G+ A D +
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 36/294 (12%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I + G++G A ++ M + C V+++ L+ A +++ + +F+++
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
KPD V+Y T++ F ++ +S EMEK+G PD++TF L+D L G F E
Sbjct: 325 -KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGL--------AVE------------------------ 250
M + + P++ +YN + GL A+E
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 251 KKTGEAVEFLQEMEK---KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
K+G++V L+ EK K + P++ + NA + G EAK+ F ++ PD
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
T+ ++ + G++ AI ++ E+ C ++ +++ L + EA
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 12/293 (4%)
Query: 58 RTKTGIYE-DTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSG 110
+ KTG ++ D V + +F D+ ++ +S+ K+G ++T K+G
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 111 MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
A D M ++ + ++N L+ L + +F + + VKP +Y
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME-SLGVKPTAYTY 436
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
I + KS SA+ E+M+ G++P+++ N L L GR E ++++ +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
L PD +YN + + + EA++ L EM + +PD+ +N++I +DE
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
A K F +++ + P T+ TL+ L + G ++ AI E+F + G P
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI----ELFEGMVQKGCP 605
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 2/241 (0%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
++N L+ L + + + +F +V + PD+ +YN ++ A+ KS + + +E
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ-MGGKNLSPDIRSYNARLLGLAVEK 251
M + + IT N ++ GL G ++ L+ M ++ SP +Y + GL+
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
+ EA + + M +P+ N +I GF G D A F + K PD T++
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTN 371
LV LC G + + KE+ + L+++ L L EA + KT+
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 372 R 372
R
Sbjct: 1026 R 1026
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 111 MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
M + A+ +F ++ C V ++N LL AY S + + ++KE+ + + +++
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH-ECEANTITH 858
Query: 171 NTVIKAFCKSKVFESAVSMLEE-MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
N VI K+ + A+ + + M SP T+ L+DGL GR E ++L+ M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
P+ YN + G + A + M K+ V+PDL + + ++ G +D
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
E +F E+++S +PD + ++ L + L+ A+ + E+ +R
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 173 VIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+I+ CK A ++ E+ K+ GV P L T+N L+ GL E + ++ Q+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
PD+ +YN L K E E +EM + + + + N +I G V GN+D+A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 292 KKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
+ ++ + P T+ L+ L + G L A + + + + CR + ++++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F M T ++ + Y S F+++ + + P++V+ N +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASL 475
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ K+ A + ++ G+ PD +T+N ++ G +E KL +M
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD+ N+ + L + EA + M++ +KP + + N ++ G G + EA +
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F + + P+ TF TL LC+ ++ A+ ++ ++ + C ++ LV
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 355 ESMLSEA 361
+ EA
Sbjct: 656 NGQVKEA 662
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 127/302 (42%), Gaps = 42/302 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRV-VERIFKEVPGE 160
L+ GK+G + A ++F+ M ++ C ++FN L + + + ++ +FK + +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--D 636
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ PD+ +YNT+I K+ + A+ +M+K V PD +T TLL G+ E+
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIED 695
Query: 221 GEKL----------------WGQMGGKNLS----PDIRSYNARLLGLAVEKK-------- 252
K+ W + G L+ + S++ RL+ + +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 253 ----------TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+G F + + V+P L + N +I G + ++ A+ F +++ +
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAK 362
PD T+ L+ + G + ++ KE+ C +V+ LV + +A
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 363 EI 364
++
Sbjct: 876 DL 877
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+K D +Y T+ K+ + A L +M + G + ++N L+ L E
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+++ +M + P +++Y++ ++GL + + L+EME +KP++++ I+
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
G ++EA + ++ PD T+ L+ LC L D KE+F
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL----DCAKEVF 316
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%)
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
FK V G +++ + N +++A E + + M+K + D T+ T+ L
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+G ++ +M + SYN + L + EA+E + M + +P L
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ ++++ G ++D E+E P+ TF + L G + A +++K +
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ C +++D L + L AKE+ E KT R+ P
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 12/236 (5%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +FD+M E T V++FN L+ + + ++ G+ + D+V+Y T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIV 268
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
CK +SA+++L +ME+ + PD++ ++ ++D L +G + + L+ +M K ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +YN + G + +A L++M ++++ PD+ + NA+I V EG L EA+K
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKG---------DLKTAIDVV--KEIFNTRCR 339
E+ PD T+ +++ C+ DL + DVV I + CR
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 147/313 (46%), Gaps = 19/313 (6%)
Query: 72 AGAKQFRGV---IDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCT 128
+G+ F+ + ID ++ + F ++I ++ + P A ++ +M R
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 129 RTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC-KSKVFES-- 185
+ SFN L+ + + F ++ ++ +PD+V++NT++ C + ++ E+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 186 ------------AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
AV++ ++M + G++P +ITFNTL++GL EGR E L +M GK L
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
D+ +Y + G+ T A+ L +ME+ +KPD+ +AII +G+ +A+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
F E+ + P+ T+ ++ C G A +++++ ++ V
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 354 SESMLSEAKEIVE 366
E L EA+++ +
Sbjct: 378 KEGKLFEAEKLCD 390
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 126/247 (51%), Gaps = 6/247 (2%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A+ MFD M + V++FN ++ Y +K+ ++ +E+ + + +YNT+I
Sbjct: 420 AKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLI 474
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ +A + +EM +GV PD IT N LL G + EE +L+ + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
D +YN + G+ K EA + + V+PD+ + N +I GF + + +A
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F +++ + ++PD +T+ TL+ + G++ +I+++ E+ + A +++V D L++
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LIT 653
Query: 355 ESMLSEA 361
+ L ++
Sbjct: 654 DGRLDKS 660
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A+ +F EM E+ V ++N ++ + ++ +R+ +++ E + PD+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDV 366
Query: 168 VSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
+++N +I A K K+FE A + +EM + PD +T+N+++ G RF++ + ++
Sbjct: 367 LTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
M SPD+ ++N + K+ E ++ L+E+ ++ + + + N +I GF
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
NL+ A+ F E+ PD T L+ CE L+ A+++ + I ++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 347 LVVDKLVSESMLSEAKEI 364
+++ + S + EA ++
Sbjct: 542 IIIHGMCKGSKVDEAWDL 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ K G A ++ DEM R +++N+++ + ++ + +F ++
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-----DL 426
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+V++NT+I +C++K + + +L E+ + G+ + T+NTL+ G
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L+ +M + PD + N L G +K EA+E + ++ + D + N II G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+DEA F + +PD T+ ++ C K + A
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +GK GM + ++ +M E T+ ++N L+ + + ER+F EV
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESG 251
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KPD+V+YNT+IK +CK+ + A+ L +ME G D IT+ T++ YA+ F
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ +M K + +++ + GL E K E + M +K KP++ +I G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR-- 339
+ G++++A + + PD T++ +V LC+ G ++ A+D F+T CR
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY----FHT-CRFD 426
Query: 340 ---VGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ + ++D L + EA+ + E
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G +F+ M + V + L+ Y S R+ + E KPD+
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDV 397
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+Y+ V+ CK+ E A+ +G++ + + +++L+DGL GR +E E+L+ +
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-VKPDLFSLNAIIKGFVNEG 286
M K + D YNA + +K EA+ + ME+++ +++ ++ G E
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI------------- 333
+EA K + + P F L LC G + A ++ E+
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED 577
Query: 334 -FNTRCRVG 341
NT C+ G
Sbjct: 578 MINTLCKAG 586
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 92/191 (48%)
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N +IK+F K + E + + +M++NG+ P L T+N L++GL + + E+++ M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
+ PDI +YN + G +T +A+E L++ME + + D + +I+ + +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
+ E+++ + F+ ++ LC++G L V + + + + +++D
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 351 KLVSESMLSEA 361
+ +A
Sbjct: 371 GYAKSGSVEDA 381
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
F + LI GK+G A ++F+EM E+ CTR +NAL
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL-------------------- 473
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEG 216
I AF K + + A+++ + M E+ G + T+ LL G++ E
Sbjct: 474 ----------------IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
R EE KLW M K ++P + A GL + K A + L E+ V D +
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA-ACE 576
Query: 277 AIIKGFVNEGNLDEAKK 293
+I G + EA K
Sbjct: 577 DMINTLCKAGRIKEACK 593
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N L+ G EE +W +M + P + +YN + GL A + ME
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+KPD+ + N +IKG+ G +A + ++E ++ DK T+ T++ D +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 326 AIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ + +E+ +V LV+ L E L+E + E
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 14/324 (4%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF--SAR----LITLYGKSG 110
FR Y ++ A +++ + +++ Q +GF +AR LI G++G
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQ------DGFPTTARTFNLLICSCGEAG 198
Query: 111 MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
+ K+A F + N S+NA+L + L KQY+++E ++K++ E PD+++Y
Sbjct: 199 LAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML-EDGFSPDVLTY 257
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N ++ + + + +EM ++G SPD T+N LL L + M
Sbjct: 258 NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
+ P + Y + GL+ FL EM K +PD+ +I G+V G LD+
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
AK+ F E+ P+ T+ +++ LC G+ + A ++KE+ + C + +V
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Query: 351 KLVSESMLSEAKEIV-ELGKTNRY 373
L LSEA++++ E+ K Y
Sbjct: 438 YLRKAGKLSEARKVIREMVKKGHY 461
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 19/258 (7%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLIT----LYGKSGMPKRAR--Q 117
Y + L G KQ++ + + Y ++GFS ++T L+ + K R +
Sbjct: 222 YNAILNSLLGVKQYKLI------EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
+FDEM + ++N LL + + E+ + P ++ Y T+I
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMK-EVGIDPSVLHYTTLIDGL 334
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
++ E+ L+EM K G PD++ + ++ G G ++ ++++ +M K P++
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
+YN+ + GL + + EA L+EME + P+ + ++ G L EA+K E
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 298 IEKSENDPDKNTFATLVP 315
+ K K + LVP
Sbjct: 455 MVK------KGHYVHLVP 466
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 12/236 (5%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +FD+M E T V++FN L+ + + ++ G+ + D+V+Y T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIV 268
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
CK +SA+++L +ME+ + PD++ ++ ++D L +G + + L+ +M K ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +YN + G + +A L++M ++++ PD+ + NA+I V EG L EA+K
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKG---------DLKTAIDVV--KEIFNTRCR 339
E+ PD T+ +++ C+ DL + DVV I + CR
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 147/313 (46%), Gaps = 19/313 (6%)
Query: 72 AGAKQFRGV---IDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCT 128
+G+ F+ + ID ++ + F ++I ++ + P A ++ +M R
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 129 RTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC-KSKVFES-- 185
+ SFN L+ + + F ++ ++ +PD+V++NT++ C + ++ E+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 186 ------------AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
AV++ ++M + G++P +ITFNTL++GL EGR E L +M GK L
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
D+ +Y + G+ T A+ L +ME+ +KPD+ +AII +G+ +A+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
F E+ + P+ T+ ++ C G A +++++ ++ V
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 354 SESMLSEAKEIVE 366
E L EA+++ +
Sbjct: 378 KEGKLFEAEKLCD 390
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A+ MFD M + V++FN ++ Y +K+ ++ +E+ + + +YNT+I
Sbjct: 420 AKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLI 474
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ +A + +EM +GV PD IT N LL G + EE +L+ + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
D +YN + G+ K EA + + V+PD+ + N +I GF + + +A
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F +++ + ++PD +T+ TL+ + G++ +I+++ E+
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A+ +F EM E+ V ++N ++ + ++ +R+ +++ E + PD+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDV 366
Query: 168 VSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
+++N +I A K K+FE A + +EM + PD +T+N+++ G RF++ + ++
Sbjct: 367 LTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
M SPD+ ++N + K+ E ++ L+E+ ++ + + + N +I GF
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
NL+ A+ F E+ PD T L+ CE L+ A+++ + I ++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 347 LVVDKLVSESMLSEAKEI 364
+++ + S + EA ++
Sbjct: 542 IIIHGMCKGSKVDEAWDL 559
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ K G A ++ DEM R +++N+++ + ++ + +F ++
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-----DL 426
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD+V++NT+I +C++K + + +L E+ + G+ + T+NTL+ G
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L+ +M + PD + N L G +K EA+E + ++ + D + N II G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+DEA F + +PD T+ ++ C K + A
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +Y ++ Q+ E+ R ++N L+ + + +F+E+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH- 496
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD ++ N ++ FC+++ E A+ + E ++ + + D + +N ++ G+ + +E
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + + PD+++YN + G + +A +M+ +PD + N +I+G
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ G +D++ + E+ + D T +C D
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N LL + + + +++ F V +S PD+ + T I AFCK E AV + +ME
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ GV+P+++TFNT++DGL GR++E +M + + P + +Y+ + GL K+ G
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+A L+EM KK P++ N +I F+ G+L++A + + +T+ TL+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
C+ G A ++KE+ + V V+ L S M A V
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
G LI+ K G +A +++ + + + NALL + + RI KE
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ G V D VSYNT+I C K + A L+EM K G+ PD T++ L+ GL+
Sbjct: 531 ILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ EE + W + PD+ +Y+ + G ++T E EF EM K+V+P+ N
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+I+ + G L A + +++ P+ T+ +L+
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A Q +D+ V +++ ++ +++ + F E+ + +V+P+ V YN +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLI 652
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+A+C+S A+ + E+M+ G+SP+ T+ +L+ G+ R EE + L+ +M + L
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 235 PDIRSYNARLLGLAVEKKTGEAVE---FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P++ Y A + G K G+ V+ L+EM K+V P+ + +I G+ +GN+ EA
Sbjct: 713 PNVFHYTALIDGYG---KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 292 KKWFGEIEKSENDPDKNTFATLV 314
+ E+ + PD T+ +
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFI 792
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 92 DFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
+ +K+GF LI + ++G +A ++ D M + + T ++N L+ Y +
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
Q ER+ KE+ I + S+ +VI C +F+SA+ + EM +SP
Sbjct: 415 QADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
TL+ GL G+ + +LW Q K D R+ NA L GL K EA +E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+ D S N +I G + LDEA + E+ K PD T++ L+ L ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 326 AI 327
AI
Sbjct: 594 AI 595
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I + K G + A ++F +M E V++FN ++ +Y +FKE E
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEKMVERG 325
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++P L++Y+ ++K ++K A +L+EM K G P++I +N L+D G +
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
++ M K LS +YN + G + A L+EM + S ++I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+ D A ++ GE+ P TL+ LC+ G A+++ + N
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
++ FDEM +N + +N L+ AY S + + + +++ + + P+ +Y ++I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLI 687
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
K E A + EEM G+ P++ + L+DG G+ + E L +M KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P+ +Y + G A + EA L EM +K + PD + I G++ +G + EA K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
++G A ++ E+ R C +S+N L++ K+ E+ +KPD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDN 575
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+Y+ +I E A+ ++ ++NG+ PD+ T++ ++DG R EEG++ + +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M KN+ P+ YN + + A+E ++M+ K + P+ + ++IKG
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLV 314
++EAK F E+ +P+ + L+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V F + A+ + ++F ++ E V P++V++NTVI ++ A
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E+M + G+ P LIT++ L+ GL R + + +M K P++ YN +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+A+E M K + + N +IKG+ G D A++ E+ + ++ +F
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+++ LC +A+ V E+ G LL ++ L S+A E+
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+ +Y+ +I CK++ E +EM V P+ + +N L+ GR +L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
M K +SP+ +Y + + G+++ + EA +EM + ++P++F A+I G+
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G + + + E+ P+K T+ ++ G++ A ++ E+
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 96 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL-HSKQYRVVERIF 154
+G +I L M A + EM RN + L++ H K + +E F
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 155 KEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYA 214
+ + V D + N ++ C++ + A + +E+ G D +++NTL+ G
Sbjct: 495 QFLNKGFVV--DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 215 EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
+ + +E +M + L PD +Y+ + GL K EA++F + ++ + PD+++
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+ +I G +E +++F E+ P+ + L+ C G L A+++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N LL + + + +++ F V +S PD+ + T I AFCK E AV + +ME
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ GV+P+++TFNT++DGL GR++E +M + + P + +Y+ + GL K+ G
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+A L+EM KK P++ N +I F+ G+L++A + + +T+ TL+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
C+ G A ++KE+ + V V+ L S M A V
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
G LI+ K G +A +++ + + + NALL + + RI KE
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ G V D VSYNT+I C K + A L+EM K G+ PD T++ L+ GL+
Sbjct: 531 ILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ EE + W + PD+ +Y+ + G ++T E EF EM K+V+P+ N
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+I+ + G L A + +++ P+ T+ +L+
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A Q +D+ V +++ ++ +++ + F E+ + +V+P+ V YN +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLI 652
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+A+C+S A+ + E+M+ G+SP+ T+ +L+ G+ R EE + L+ +M + L
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 235 PDIRSYNARLLGLAVEKKTGEAVE---FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P++ Y A + G K G+ V+ L+EM K+V P+ + +I G+ +GN+ EA
Sbjct: 713 PNVFHYTALIDGYG---KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 292 KKWFGEIEKSENDPDKNTFATLV 314
+ E+ + PD T+ +
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFI 792
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 92 DFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
+ +K+GF LI + ++G +A ++ D M + + T ++N L+ Y +
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
Q ER+ KE+ I + S+ +VI C +F+SA+ + EM +SP
Sbjct: 415 QADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
TL+ GL G+ + +LW Q K D R+ NA L GL K EA +E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+ D S N +I G + LDEA + E+ K PD T++ L+ L ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 326 AI 327
AI
Sbjct: 594 AI 595
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I + K G + A ++F +M E V++FN ++ +Y +FKE E
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEKMVERG 325
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++P L++Y+ ++K ++K A +L+EM K G P++I +N L+D G +
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
++ M K LS +YN + G + A L+EM + S ++I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+ D A ++ GE+ P TL+ LC+ G A+++ + N
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
++ FDEM +N + +N L+ AY S + + + +++ + + P+ +Y ++I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLI 687
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
K E A + EEM G+ P++ + L+DG G+ + E L +M KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P+ +Y + G A + EA L EM +K + PD + I G++ +G + EA K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
++G A ++ E+ R C +S+N L++ K+ E+ +KPD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDN 575
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+Y+ +I E A+ ++ ++NG+ PD+ T++ ++DG R EEG++ + +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M KN+ P+ YN + + A+E ++M+ K + P+ + ++IKG
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLV 314
++EAK F E+ +P+ + L+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V F + A+ + ++F ++ E V P++V++NTVI ++ A
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E+M + G+ P LIT++ L+ GL R + + +M K P++ YN +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+A+E M K + + N +IKG+ G D A++ E+ + ++ +F
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+++ LC +A+ V E+ G LL ++ L S+A E+
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+ +Y+ +I CK++ E +EM V P+ + +N L+ GR +L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
M K +SP+ +Y + + G+++ + EA +EM + ++P++F A+I G+
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G + + + E+ P+K T+ ++ G++ A ++ E+
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 96 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL-HSKQYRVVERIF 154
+G +I L M A + EM RN + L++ H K + +E F
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 155 KEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYA 214
+ + V D + N ++ C++ + A + +E+ G D +++NTL+ G
Sbjct: 495 QFLNKGFVV--DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 215 EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
+ + +E +M + L PD +Y+ + GL K EA++F + ++ + PD+++
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+ +I G +E +++F E+ P+ + L+ C G L A+++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG-EI 161
I + K G+ ++A+ +FD M ++ +L+ Y K R + E+ I
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P +Y TV+K C S + A ++++EM +G P+++ + TL+ RF +
Sbjct: 414 VISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M + ++PDI YN+ ++GL+ K+ EA FL EM + +KP+ F+ A I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
++ A K+ E+ + P+K L+ C+KG + A + + +
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 342 APLLQLVVDKLVSESMLSEAKEI 364
A ++++ L + +A+EI
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEI 614
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 58 RTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQ 117
R IY ++ +F + +L+ K+ LI K+ AR
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
EM E ++ A ++ Y+ + ++ ++ KE+ E V P+ V +I +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEY 567
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
CK A S M G+ D T+ L++GL+ + ++ E+++ +M GK ++PD+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
SY + G + +A EM ++ + P++ N ++ GF G +++AK+ E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ P+ T+ T++ C+ GDL A + E+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 36/288 (12%)
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
SG A + EM C V+ + L+ +L + ++ R+ KE+ E + PD+
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIF 488
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
YN++I K+K + A S L EM +NG+ P+ T+ + G F +K +M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 229 GGKNLSP-----------------------------------DIRSYNARLLGLAVEKKT 253
+ P D ++Y + GL K
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+A E +EM K + PD+FS +I GF GN+ +A F E+ + P+ + L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 314 VPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
+ C G+++ A +++ E+ A ++D L+EA
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 12/281 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G A + M ++ ++ L+ + + E IF+E+ G+
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK- 621
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD+ SY +I F K + A S+ +EM + G++P++I +N LL G G E+
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++L +M K L P+ +Y + G EA EM+ K + PD F ++ G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 282 FVNEGNLDEAKKWFGEIEK---SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+++ A FG +K S P F L+ ++ + G + +V+ + +
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 339 -RVGAP---LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
R G P +++D L E L AKE+ + P
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 127/311 (40%), Gaps = 36/311 (11%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
A LI Y + ++ ++ EM +RN + ++ ++ S I KE+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+P++V Y T+IK F ++ F A+ +L+EM++ G++PD+ +N+L+ GL R +
Sbjct: 446 S-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP--------- 270
E +M L P+ +Y A + G + A ++++EM + V P
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 271 --------------------------DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
D + ++ G +D+A++ F E+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
PD ++ L+ + G+++ A + E+ + +++ + +AKE+
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 365 VELGKTNRYHP 375
++ HP
Sbjct: 685 LDEMSVKGLHP 695
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 24/280 (8%)
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRV-------VERIFK----EVPGEISVKPD 166
++ M ERN V +++ L+ A+ + ++ E+ F+ V G + +K
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 167 LV---------SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
++ +Y+ +I CK K E A S+L EM+ GVS D T++ L+DGL
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 218 FEEGEKLWGQM--GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
+ + L +M G N+ P + Y+ + ++ E +A M + P +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
++I+G+ E N+ + + E++K T+ T+V +C GDL A ++VKE+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ CR + ++ + S +A +++ K P
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 8/215 (3%)
Query: 124 ERNCTRTVLSFNALLA-AYLHSKQYRVVERIFKEVPGEIS--VKPDLVSYNTVIKAFCKS 180
++ C + FNAL+ + K E + + + G KP+ V+YN +I CK
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 181 KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
E+A + +M+ + P +IT+ +LL+G GR E ++ + + PD Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 241 NARLLGLAVEKKTGEAVEFLQEMEKKDVKPD-----LFSLNAIIKGFVNEGNLDEAKKWF 295
+ + E T +A+ + +M K+ D + + A++ GF G ++ A+K
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ + + PD T L+ C + + D V
Sbjct: 939 ENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 104/255 (40%), Gaps = 38/255 (14%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE-VPGEISVKPDLVSYNTV 173
A+ + EM + +++ L+ L + + + E V I++KP + Y+
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCC 353
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
I K V E A ++ + M +G+ P + +L++G E +G +L +M +N+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 234 -----------------------------------SPDIRSYNARLLGLAVEKKTGEAVE 258
P++ Y + + G+A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
L+EM+++ + PD+F N++I G +DEA+ + E+ ++ P+ T+ +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 319 EKGDLKTAIDVVKEI 333
E + +A VKE+
Sbjct: 534 EASEFASADKYVKEM 548
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 153/358 (42%), Gaps = 41/358 (11%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYG 107
FK A + F+ + A + F V +L + + E + YG
Sbjct: 64 FKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYG 123
Query: 108 KSGMPKRARQMFDEM-PERNCTRTVLSFNALLAAYLHSKQY------------------- 147
K+ +P +A +F M E C R+V SFN++L ++ Y
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183
Query: 148 -----------------RVVER---IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
R V+R +F+ +P E PD +Y T++ CK + + AV
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
+L+EM+ G SP + +N L+DGL +G KL M K P+ +YN + GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
++ K +AV L+ M P+ + +I G V + +A + +E+ ++
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
+ ++ L+ L ++G + A+ + +++ C+ + ++VD L E +EAKEI+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 3/229 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY-LHSKQYRVVERIFKEVPGE 160
LI K G R ++ D M + C +++N L+ L K + V + + V +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
P+ V+Y T+I K + AV +L ME+ G + ++ L+ GL+ EG+ EE
Sbjct: 323 --CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
LW +M K P+I Y+ + GL E K EA E L M P+ ++ ++++K
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
GF G +EA + + E++K+ +K ++ L+ LC G +K A+ V
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 31/313 (9%)
Query: 43 KLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYS----------- 91
K VD F + VD FR K + K F V++++ ++ Y
Sbjct: 130 KAVDLFHRM--VDEFRCKRSV-----------KSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 92 -----DFSKEGFSARL-ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
+ S G S L I K RA ++F MPER C ++ L+ +
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE 236
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
+ + E+ E P V YN +I CK +++ M G P+ +T+
Sbjct: 237 RIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
NTL+ GL +G+ ++ L +M P+ +Y + GL +++ +AV L ME+
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
+ + + +I G EG +EA + ++ + P+ ++ LV LC +G
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 326 AIDVVKEIFNTRC 338
A +++ + + C
Sbjct: 416 AKEILNRMIASGC 428
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
E KP++V Y+ ++ C+ A +L M +G P+ T+++L+ G + G
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
EE ++W +M S + Y+ + GL + EA+ +M +KPD + ++I
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 279 IKGFVNEGNLDEAKKWFGEI---EKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
IKG G++D A K + E+ E+ ++ PD T+ L+ LC + D+ A+D++ + +
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 336 TRC 338
C
Sbjct: 569 RGC 571
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 20/311 (6%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y + L ++ + +L ++ + + LI+ K G + A ++ +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
E+ C ++ ++ L+ + + I + P+ +Y++++K F K+ +
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLC 448
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
E AV + +EM+K G S + ++ L+DGL GR +E +W +M + PD +Y++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 244 LLGLAVEKKTGEAVEFLQEM---EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
+ GL A++ EM E+ +PD+ + N ++ G + ++ A +
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 301 SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSE 360
DPD T T + L EK + C G L+ +V +L+ +S
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSN--------------SCDKGRSFLEELVVRLLKRQRVSG 614
Query: 361 AKEIVE--LGK 369
A IVE LGK
Sbjct: 615 ACTIVEVMLGK 625
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
+FN L+ A S +F E+P E KP+ ++ +++ +CK+ + + + +L
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMP-EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
ME GV P+ + +NT++ EGR ++ EK+ +M + L PDI ++N+R+ L E K
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 253 TGEAVEFLQEMEKKDV----KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN 308
+A +ME + +P+ + N ++KGF G L++AK F I ++++
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 309 TFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELG 368
++ + L G A V+K++ + +++D L MLS+AK IV L
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 369 KTNRYHP 375
K N P
Sbjct: 388 KRNGVCP 394
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
D + E NC +++++ LL + ++ + +F E+ GE ++PD V+YN I FCK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCK 571
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
SA +L++MEK G L T+N+L+ GL + + E L +M K +SP+I +
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
YN + L +K +A L EM +K++ P++FS +I+ F + D A++ F E
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETA 690
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
S + ++ + L G L A ++++ + + +G L + +V+ L + L
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Query: 360 EAKEIVE 366
A I+
Sbjct: 751 VASGILH 757
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ + + G + +M ++M E +++FN+ ++A + RIF ++ +
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 162 SV---KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
+ +P+ ++YN ++K FCK + E A ++ E + +N L ++N L GL G+F
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E E + QM K + P I SYN + GL +A + M++ V PD + +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ G+ + G +D AK E+ ++ P+ T L+ L + G + A ++++++
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYH 374
+ ++VD L L +A EIV K R H
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIV---KGMRVH 495
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 24/256 (9%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y G A+ + EM NC + N LL + + E + +++ E
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEK 460
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS---------------------- 199
D V+ N ++ C S + A+ +++ M +G +
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 200 -PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
PDLIT++TLL+GL GRF E + L+ +M G+ L PD +YN + + K A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
L++MEKK L + N++I G + + E E+++ P+ T+ T + +LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 319 EKGDLKTAIDVVKEIF 334
E ++ A +++ E+
Sbjct: 641 EGEKVEDATNLLDEMM 656
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 24/248 (9%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + +M ++ ++ S+N L+ + I + V PD V+Y ++
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN-GVCPDAVTYGCLL 403
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+C ++A S+L+EM +N P+ T N LL L+ GR E E+L +M K
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEME-----------------------KKDVKPD 271
D + N + GL + +A+E ++ M + + PD
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
L + + ++ G G EAK F E+ + PD + + C++G + +A V+K
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 332 EIFNTRCR 339
++ C
Sbjct: 584 DMEKKGCH 591
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
Q+++V F E KP + YN ++++ K + E + ++M G++P TF
Sbjct: 97 QFQLVRSRFPEN------KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTF 150
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N L+ L + +L+ +M K P+ ++ + G T + +E L ME
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
V P+ N I+ F EG D+++K ++ + PD TF + + LC++G +
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 326 A 326
A
Sbjct: 271 A 271
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 161/346 (46%), Gaps = 16/346 (4%)
Query: 28 IKSLSQDLYKEVNLRKLVDKFKKACD-VDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEH 86
+++LS D + KL KF C + FR Y ++ A +++ + +++
Sbjct: 120 LRTLSFD--NKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLID- 176
Query: 87 QKQYSDFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
+ K+G+ LI G++G+ + + F + N S+NA+L +
Sbjct: 177 -----EMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS 231
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
L KQY++++ +++++ E PD+++YN V+ A + + +L+EM K+G SP
Sbjct: 232 LLGVKQYKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
DL T+N LL L + L M + P + + + GL+ K F+
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
E K PD+ +I G+++ G L++A++ F E+ + P+ T+ +++ C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
G K A ++KE+ + C + +V+ L + + EA E+V+
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
K+GFS L T P A + + M E V+ F L+ + +
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
+ E ++ PD+V Y +I + E A M +EM + G P++ T+N++
Sbjct: 345 ACKYFMDETV-KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+ G G+F+E L +M + +P+ Y+ + L K EA E +++M +K
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Query: 269 KPDLFS 274
L S
Sbjct: 464 YVHLIS 469
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 84 LEHQKQYSDFSKEGFSA------RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
++ K Y + ++ GF+A L+ + G + + +M + T S++ +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 138 LAAYLHSKQYRVVERIFKEVP-GEI---------------------------------SV 163
L Y Y +ERI + G+I
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
KPD+V +N+++ F ++ +++ A +LE + ++G+SPDL+T+N+L+D G + E+
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ + L PD+ SYN + G EAV L EM ++ ++P +F+ N + G+
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G E + + K++ P++ TF +V C G A+D V +I
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 74 AKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLS 133
+ +R ++ +L+ + E + +++ + G+ + A++ F E+ ++
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+NALL + + Y + KE+ E S D V+YN ++ A+ ++ + A ++E M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEME-ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
K GV P+ IT+ T++D G+ +E KL+ M P+ +YNA L L + ++
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
E ++ L +M+ P+ + N ++ N+G + F E++ +PD++TF TL
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 314 V 314
+
Sbjct: 498 I 498
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 11/237 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS----KQYRVVERIFKEV 157
L+ ++GK+G+ A + EM E +C +++N L+AAY+ + + V+E + K+
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK- 380
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
V P+ ++Y TVI A+ K+ + A+ + M++ G P+ T+N +L L + R
Sbjct: 381 ----GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE-FLQEMEKKDVKPDLFSLN 276
E K+ M SP+ ++N +L L K + V +EM+ +PD + N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNT-MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I + G+ +A K +GE+ ++ + T+ L+ L KGD ++ +V+ ++
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 87 QKQYSDFSKEGFSARLI------TLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
++ ++ F K G+ ++ +++ ++ M +A + + + E + ++++N+L+
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
Y+ + E I K + + +KPDLVSYNTVIK FC+ + + AV ML EM + G+ P
Sbjct: 676 YVRRGECWKAEEILKTLE-KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
+ T+NT + G A G F E E + M + P+ ++ + G K EA++F+
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 261 QEMEKKD 267
+++ D
Sbjct: 795 SKIKTFD 801
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ YG+ G A +M+ EM V ++NALL A +R E + ++ +
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK- 555
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
KP SY+ +++ + K + + +++ + P + TLL +
Sbjct: 556 GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+ + PD+ +N+ L +A L+ + + + PDL + N+++
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+V G +A++ +EKS+ PD ++ T++ C +G ++ A+ ++ E+ R
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V + M +E ++++E N P
Sbjct: 736 IFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
QY V ++ ++P + + D+ +Y T++ A+ ++ +E A+ + E M++ G SP L+T+
Sbjct: 190 QYSVAAKLLDKIPLQEYLL-DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTY 248
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
N +LD ++G+MG RS+ ++LG+ L EM
Sbjct: 249 NVILD-------------VFGKMG--------RSWR-KILGV------------LDEMRS 274
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 325
K +K D F+ + ++ EG L EAK++F E++ +P T+ L+ + G
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 326 AIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
A+ V+KE+ C + +V V EA ++E+
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 70 RLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMP 123
R +K+ GVI+++ +K+G IT YGK+G A ++F M
Sbjct: 363 RAGFSKEAAGVIEMM---------TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS-VKPDLVSYNTVIKAFCKSKV 182
E C ++NA+L+ L K+ R E I + + P+ ++NT++ A C +K
Sbjct: 414 EAGCVPNTCTYNAVLS--LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470
Query: 183 FESAVS-MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
+ V+ + EM+ G PD TFNTL+ G + K++G+M + + +YN
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 242 ARLLGLAV--EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
A L LA + ++GE V + +M+ K KP S + +++ + GN
Sbjct: 531 ALLNALARKGDWRSGENV--ISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 2/238 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY-LHSKQYRVVERIFKEVPGE 160
++ Y ++G ++A +F+ M E + T++++N +L + + +R + + E+ +
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+K D + +TV+ A + + A E++ G P +T+N LL G + E
Sbjct: 276 -GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M + D +YN + + EA ++ M KK V P+ + +I
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ G DEA K F ++++ P+ T+ ++ L +K I ++ ++ + C
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G+ AR++ ++M ++ N L ++ V R KE+ PD+V+
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y+T+IKA+ K A+ M+ EM + G+ + IT NT+LD L E + +E L
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ D +Y ++G E+K +A+E EM+K + P + + N++I G + G +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
A + F E+ +S PD +TF +++ C++G ++ A + E + +++
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 350 DKLVSESMLSEA 361
+ L E M +A
Sbjct: 599 NGLCKEGMTEKA 610
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 36/296 (12%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y S AR++FD+M + + V +FN L+ Y + + + + E V P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V+YNT++KA K +L +M+KNG+ P+ +T+N L+ G G +E ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M N+ PD+ +YN + GL E +E + M+ ++PD+ + N +I G
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 286 GNLDEAKK----------------------WFGEIEKSEN--------------DPDKNT 309
G EA+K W + EK E PD T
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
+ TL+ + GDL A+++++E+ ++ L ++D L E L EA ++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 111/206 (53%), Gaps = 5/206 (2%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
+++++ L+ AYL + +E+ G+ +K + ++ NT++ A CK + + A ++L
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREM-GQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
K G D +T+ TL+ G + E + E+ ++W +M ++P + ++N+ + GL
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
KT A+E E+ + + PD + N+II G+ EG +++A +++ E K PD T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNT 336
L+ LC++G + A++ FNT
Sbjct: 595 NILLNGLCKEGMTEKALN----FFNT 616
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 96 EGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRV 149
GFS ++T Y K G A +M EM ++ ++ N +L A ++
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
+ + D V+Y T+I F + + E A+ M +EM+K ++P + TFN+L+
Sbjct: 470 AHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
GL G+ E + + ++ L PD ++N+ +LG E + +A EF E K K
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 270 PDLFSLNAIIKGFVNEG----------------------------------NLDEAKKWF 295
PD ++ N ++ G EG L EA
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
E+E+ +PD+ T+ + + L E G L +++K+
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK---SKVFESAVSML 190
F+ L+AYLH + V +IF+++ + +KP+L++ NT++ + S SA +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMI-RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK-NLSPDIRSYNARLLGLAV 249
++M K GVS ++ TFN L++G EG+ E+ + +M + ++PD +YN L ++
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+ + + E L +M+K + P+ + N ++ G+ G+L EA + ++++ PD T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ L+ LC G ++ ++++ + + + + ++D + EA++++E
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY---AEG 216
+S P ++ + A+ A+ + ++M + + P+L+T NTLL GL +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK-DVKPDLFSL 275
+++ M +S +++++N + G +E K +A+ L+ M + V PD +
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
N I+K +G L + K+ +++K+ P++ T+ LV C+ G LK A +V+ +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
T ++++ L + + E E+++ K+ + P
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y K G ++A + ++E + + + N LL F + E
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V D V+YNT+I AFCK K + A +L EME+ G+ PD T+N+ + L +G+ E
Sbjct: 622 EV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 222 EKLWGQMGGK 231
++L + GK
Sbjct: 680 DELLKKFSGK 689
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 8/316 (2%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL----YGKSGMPKRARQMF 119
Y V L +KQF + D L ++Y+ F S+++ + Y ++ +P A + F
Sbjct: 105 YHILVEILGSSKQFALLWDFLIEAREYNYFE---ISSKVFWIVFRAYSRANLPSEACRAF 161
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
+ M E V + LL + K + F + G + P +Y+ +++ + +
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKG-FGIVPSAKTYSILVRGWAR 220
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
+ A + +EM + DL+ +N LLD L G + G K++ +MG L PD S
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
+ + A + L M++ D+ P++++ N IIK +D+A E+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
+ +PD T+ +++ + C+ ++ A ++ + T+C +V+ L+
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 360 EAKEIVELGKTNRYHP 375
A EI E +++P
Sbjct: 401 RATEIWEGMSERKFYP 416
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 2/213 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
AR++FDEM ERNC +L++NALL A S ++F+E+ G + +KPD S+ I
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM-GNLGLKPDAYSFAIFI 285
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
A+C + SA +L+ M++ + P++ TFN ++ L + ++ L +M K +
Sbjct: 286 HAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD +YN+ + + A + L M++ PD + N ++K + G D A +
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Query: 295 FGEIEKSENDPDKNTFATLVPFLC-EKGDLKTA 326
+ + + + P T+ ++ L +KG L+ A
Sbjct: 406 WEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ LIT KSG A + EM + V++F+AL+ AY + V+ ++K +
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI- 145
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++S+ P++ +Y+++I C + A+ ML+ M G +P+++T++TL +G + R +
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+G KL M + ++ + S N + G K A+ M + P++ S N ++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
G G +++A F ++K+ ND D T+ ++ +C+ +K A D+
Sbjct: 266 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 93/179 (51%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ ++PD+V+ ++++ FC S + AV + +MEK G+ D++ L+D L
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
++ +M + +SP++ +Y++ + GL + +A L EM+ K + P++ + +A+I
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ G L + + + + DP+ T+++L+ LC + AI ++ + + C
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 85/167 (50%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ P++V+Y+++I CKS A L EM+ ++P++ITF+ L+D G+ + +
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
++ M ++ P++ +Y++ + GL + + EA++ L M K P++ + + + GF
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+D+ K ++ + + + TL+ + G + A+ V
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 84/154 (54%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ +K D+V +I CK+++ A+ +L+ M+ G+SP+++T+++L+ GL GR
Sbjct: 41 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 100
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ E+ +M K ++P++ +++A + A K + + M + + P++F+ +++I
Sbjct: 101 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
G +DEA K + P+ T++TL
Sbjct: 161 YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%)
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
+M K G+ PD++T ++L++G ++ + GQM + D+ + L +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
A+E L+ M+ + + P++ + +++I G G L +A++ E++ + +P+ TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 312 TLVPFLCEKGDLKTAIDVVK 331
L+ ++G L V K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYK 142
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 125/249 (50%), Gaps = 9/249 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR---VVERIFKEVP 158
++ +Y +SG +A+++ D M +R C ++SFN L+ A L S VE + ++
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL--DMV 288
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
++PD ++YNT++ A + + AV + E+ME + PDL T+N ++ G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E E+L+ ++ K PD +YN+ L A E+ T + E Q+M+K D + N I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 279 IKGFVNEGNLDEAKKWFGEIEK-SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
I + +G LD A + + +++ S +PD T+ L+ L + A ++ E+ +
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 338 CRVGAPLLQ 346
+ P LQ
Sbjct: 469 IK---PTLQ 474
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 120/243 (49%), Gaps = 2/243 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F++M C + ++NA+++ Y ER+F E+ + PD V+YN+++
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK-GFFPDAVTYNSLL 374
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG-KNL 233
AF + + E + ++M+K G D +T+NT++ +G+ + +L+ M G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
+PD +Y + L +T EA + EM +KP L + +A+I G+ G +EA+
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
F + +S PD ++ ++ L + + A + +++ + L +L++ L+
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLM 554
Query: 354 SES 356
E+
Sbjct: 555 KEN 557
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 127/259 (49%), Gaps = 9/259 (3%)
Query: 82 DILEHQKQYSDFSKEGF--SARL----ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFN 135
+I E +K YS G+ + RL I L K + A M EM E N + +N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 136 ALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
++L Y + Y+ ++++ + E ++PD +YNT+I +C+ + E ++++M
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIK-ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
G+ P L T+ +L+ + E+ E+L+ ++ K L D RS+ ++ ++ + +
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD-RSFYHTMMKISRDSGSDS 1049
Query: 256 AVE-FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
E LQ M+ ++P L +++ ++ + + GN EA+K ++ +E + +++++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 315 PFLCEKGDLKTAIDVVKEI 333
D + I+ + E+
Sbjct: 1110 DAYLRSKDYNSGIERLLEM 1128
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE--GEKLWGQ 227
YN ++ + +S F A +++ M + G PDLI+FNTL++ G +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ L PD +YN L + + AV+ ++ME +PDL++ NA+I + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLV-PFLCEKGDLKTAIDVVKEIFNTRCRVG 341
EA++ F E+E PD T+ +L+ F E+ K VKE++ ++G
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEK-----VKEVYQQMQKMG 397
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I YGK + ++A + + + T + ++N+L++AY Y IF + +
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD- 816
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P + S N ++ A C E ++EE++ G + +LD G E
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+K++ M P IR Y + L K+ +A + EME+ + K +L N+++K
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+ + + + + I+++ +PD+ T+ TL+ C
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y +I+A+ K K+++ A S++ + ++G +PDL T+N+L+ G +E ++ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
SP + S N L L V+ + E ++E++ K S+ ++ F GN+
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E KK + ++ + P + ++ LC+ ++ A +V E+
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 91/199 (45%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + + ++ ++++ +M + + +++N ++ Y Q + +++K++ G
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD ++Y +I + K+ A +++ EM G+ P L T++ L+ G G+ EE
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E + M PD +Y+ L L +T +A ++M P +I G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 282 FVNEGNLDEAKKWFGEIEK 300
+ E D+ +K ++E+
Sbjct: 553 LMKENRSDDIQKTIRDMEE 571
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + ++G ++++ M T+ + ++ K+ R E + E+ E
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME-EA 921
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ K +L +N+++K + + ++ V + + +++ G+ PD T+NTL+ + R EEG
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L QM L P + +Y + + +K +A + +E+ K +K D + ++K
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G+ +A+K ++ + +P T L+ G+ + A V+ + +T +
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 342 APLLQLVVD 350
V+D
Sbjct: 1102 TLPYSSVID 1110
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 86 HQKQYSDFSKEGFSAR-LITLYGKSGMPKRARQMFDEM---PERNCTRTVLSFNALLAAY 141
Q Q F K+ + +I +YGK G A Q++ +M RN +++ L+ +
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSL 448
Query: 142 LHSKQYRVVER--IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
K R VE + E+ ++ +KP L +Y+ +I + K+ E A M ++G
Sbjct: 449 --GKANRTVEAAALMSEML-DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK 505
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWG---QMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
PD + ++ +LD L R E K WG M +P Y +LGL E ++ +
Sbjct: 506 PDNLAYSVMLDVLL---RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDI 562
Query: 257 VEFLQEMEK 265
+ +++ME+
Sbjct: 563 QKTIRDMEE 571
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 39/252 (15%)
Query: 66 DTVRRLAGAKQFRG---VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEM 122
+T+ L KQ+ V D+L Q Y KEG +L+ L GKSG P RA+++FDEM
Sbjct: 93 ETLSDLIAKKQWLQALEVFDMLREQTFYQ--PKEGTYMKLLVLLGKSGQPNRAQKLFDEM 150
Query: 123 PERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKV 182
E TV + ALLAAY S I ++ +PD+ +Y+T++KA +
Sbjct: 151 LEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQ 210
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
F+ S+ +EM++ ++P+ +T N +L G GRF++ EK+ M
Sbjct: 211 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM-------------- 256
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
L+ A KPD++++N I+ F N G +D + W+ +
Sbjct: 257 -LVSTA-------------------CKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFG 296
Query: 303 NDPDKNTFATLV 314
+P+ TF L+
Sbjct: 297 IEPETRTFNILI 308
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L L G ++A ++F S+N L+ A+ + + ++F ++ E
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ER 219
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V PD+ SY +I+ FC+ A+ +L++M G PD +++ TLL+ L + + E
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL +M K +PD+ YN +LG E + +A + L +M P+ S +I G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
++G DE KK+ E+ P + LV C G ++ A DVV+ + +
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 342 APLLQLVVDKLVSE 355
+ ++V+ + +E
Sbjct: 400 SDTWEMVIPLICNE 413
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + + G A ++ D+M + LS+ LL + Q R ++ + +
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK- 289
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PDLV YNT+I FC+ A +L++M NG SP+ +++ TL+ GL +G F+EG
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+K +M K SP N + G K EA + ++ + K + +I
Sbjct: 350 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPL 409
Query: 282 FVNEGNLDEAKKWFGEIEKSE 302
NE ++ K + + K E
Sbjct: 410 ICNEDESEKIKLFLEDAVKEE 430
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y K G+ + ++F E+ + + +V++ N LL L +++ V +
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYS-VMCRV 230
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P+ ++N + FC F LE+ME+ G PDL+T+NTL+ GR +E
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ M + + PD+ +Y + + GL + + EA + M + +KPD S N +I
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ EG + ++KK E+ + PD+ T +V +G L +A++ V E+ + +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
+ ++ L E AK +++
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLD 435
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 24/293 (8%)
Query: 59 TKTGIYEDT------VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------Y 106
+ GI+ +T FR V D LE ++ EGF L+T Y
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEE------EGFEPDLVTYNTLVSSY 281
Query: 107 GKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPD 166
+ G K A ++ M R ++++ +L+ + R + F + +KPD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR-GIKPD 340
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
+SYNT+I A+CK + + + +L EM N V PD T +++G EGR
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ---EMEKKDVKPDLFSLNAIIKGFV 283
++ + + ++ L E K A L E E + KP+ + N +I+
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETY--NNLIESLS 458
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
++EA G+++ D T+ L+ LC G + A ++ E+F++
Sbjct: 459 RCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDS 511
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 17/239 (7%)
Query: 119 FDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC 178
++M E ++++N L+++Y + + ++K + V PDLV+Y ++IK C
Sbjct: 259 LEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK-IMYRRRVVPDLVTYTSLIKGLC 317
Query: 179 KSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
K A M G+ PD +++NTL+ EG ++ +KL +M G ++ PD
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE- 297
+ + G E + AV F+ E+ + V + +I EG AK
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 298 IEKSENDPDKNTFATLVPFL--CE--------KGDLKTAIDVV-----KEIFNTRCRVG 341
IE+ ++ T+ L+ L C+ KG LK V+ + + CR+G
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 37/256 (14%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K G + A Q F M +R +S+N L+ AY + +++ E+ G
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN- 370
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM---------------------------- 193
SV PD + +++ F + SAV+ + E+
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAA 430
Query: 194 --------EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
E+ G T+N L++ L EE L G++ +N D ++Y A +
Sbjct: 431 KHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIG 490
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
L + EA + EM +VKPD F A++ G+ E + D+A++
Sbjct: 491 CLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIF 550
Query: 306 DKNTFATLVPFLCEKG 321
D ++ +LV +CE G
Sbjct: 551 DPESYNSLVKAVCETG 566
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 93/201 (46%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V ++ ++K + K + E + E+ +G S ++T N LL+GL E+ +++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M + P+ ++N + E +FL++ME++ +PDL + N ++ +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL 345
G L EA + + + PD T+ +L+ LC+ G ++ A + + +
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 346 QLVVDKLVSESMLSEAKEIVE 366
++ E M+ ++K+++
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLH 365
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 16/273 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAK--QFRGVID-------ILEHQKQYSDFSKEGFSARL 102
C+ +R+ + + D + R F +ID ++E +K Y + K +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 103 IT---LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
T L M R A+ MF+ M ++C V+++N L+ + +K+ +F+E
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ + + + V+Y T+I F +++ ++A + ++M +GV P+++T+NTLLDGL G
Sbjct: 426 M-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E+ ++ + + P I +YN + G+ K + + + K VKPD+ N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+I GF +G +EA F ++ + PD T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A +++DEM +R+ + ++++L+ + + + +F+ + +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 394
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P++V+YNT+I FCK+K + V + EM + G+ + +T+ TL+ G + +
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ ++ QM + P+I +YN L GL K +A+ + +++ ++P +++ N +I+G
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
G +++ F + PD + T++ C KG
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 95 KEGFSARLITLYGK--SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
+ G L+T YG +G+ KR A + ++M V+ ++ ++ + +
Sbjct: 218 QRGCQPNLVT-YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+F E+ + V+P++++Y+++I C + + A +L +M + ++P+++TFN
Sbjct: 277 DDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+D EG+ E EKL+ +M +++ PDI +Y++ + G + + EA + M KD
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
P++ + N +I GF +DE + F E+ + + T+ TL+ + D A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V K++ + ++D L L +A + E + ++ P
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
++M + + ++N L+ + Q + + ++ ++ +P +V+ ++++ +C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCH 167
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
K AV+++++M + G PD ITF TL+ GL+ + E L +M + P++ +
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
Y + GL A L +ME ++ ++ + +I + D+A F E+E
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLS 359
P+ T+++L+ LC A ++ ++ + ++D V E L
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 360 EAKEIVE 366
EA+++ +
Sbjct: 348 EAEKLYD 354
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + + A + +M + ++++ ++LL Y H K+ + ++ E+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EM 184
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+PD +++ T+I AV++++ M + G P+L+T+ +++GL G +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF-------- 273
L +M + ++ Y+ + L + +A+ EME K V+P++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 274 ---------------------------SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ NA+I FV EG L EA+K + E+ K DPD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
T+++L+ C L A + + + + C
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + +N ++ A K K F+ +S+ E+M++ G+S +L T+N L++ + L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
G+M P I + ++ L G K+ +AV + +M + +PD + +I G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
EA + + P+ T+ +V LC++GD+ A +++ ++ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 345 LQLVVDKL 352
V+D L
Sbjct: 263 YSTVIDSL 270
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y +++ S + A+ + M K+ P + FN LL + +F+ L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+S ++ +YN + + A+ L +M K +P + +L++++ G+ + +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
+A ++ + PD TF TL+ L A+ +V + C+ +VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 350 DKL 352
+ L
Sbjct: 233 NGL 235
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 13/279 (4%)
Query: 87 QKQYSDFSKEGFSAR-------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
Q ++ EG S R L+ + + G P A+ +F + E +++S+ LLA
Sbjct: 29 QYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLA 88
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
A KQY + I EV + K D + +N VI AF +S E AV L +M++ G++
Sbjct: 89 AMTVQKQYGSISSIVSEVE-QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLN 147
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQM---GGKNLSPDIRSYNARLLGLAVEKKTGEA 256
P T+NTL+ G G+ E +L M G ++ P+IR++N + +KK EA
Sbjct: 148 PTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE--IEKSENDPDKNTFATLV 314
E +++ME+ V+PD + N I +V +G A+ E + K + P+ T +V
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
C +G ++ + V+ + R + +++ V
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 110/226 (48%), Gaps = 8/226 (3%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y + + KQ+ + I+ +Q F +I + +SG + A Q +M
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 124 ERNCTRTVLSFNALLAAY-LHSKQYR---VVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
E T ++N L+ Y + K R +++ + +E G + V P++ ++N +++A+CK
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE--GNVDVGPNIRTFNVLVQAWCK 200
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF--EEGEKLWGQMGGKNLSPDI 237
K E A ++++ME+ GV PD +T+NT+ +G E E + + + P+
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
R+ + G E + + + F++ M++ V+ +L N++I GFV
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G K Q+ M E N V++++ ++ A+ + ++FKE+ + VKPD +
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHA 392
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y+ + K + ++K + A +LE + P+++ F T++ G + G ++ +++ +M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+SP+I+++ + G K+ +A E LQ M VKP+ + + + + G D
Sbjct: 452 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTD 511
Query: 290 EAKK 293
E+ K
Sbjct: 512 ESNK 515
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ ++ + +G ++A Q+F EM + +++ L Y+ +K+ + E + + +
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI- 417
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ +P++V + TVI +C + + A+ + +M K GVSP++ TF TL+ G +
Sbjct: 418 -VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 476
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
+ E++ M G + P+ ++ V T E+ + + ++ KD++
Sbjct: 477 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 526
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 13/279 (4%)
Query: 87 QKQYSDFSKEGFSAR-------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
Q ++ EG S R L+ + + G P A+ +F + E +++S+ LLA
Sbjct: 29 QYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLA 88
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
A KQY + I EV + K D + +N VI AF +S E AV L +M++ G++
Sbjct: 89 AMTVQKQYGSISSIVSEVE-QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLN 147
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQM---GGKNLSPDIRSYNARLLGLAVEKKTGEA 256
P T+NTL+ G G+ E +L M G ++ P+IR++N + +KK EA
Sbjct: 148 PTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE--IEKSENDPDKNTFATLV 314
E +++ME+ V+PD + N I +V +G A+ E + K + P+ T +V
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
C +G ++ + V+ + R + +++ V
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 143/309 (46%), Gaps = 8/309 (2%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y + + KQ+ + I+ +Q F +I + +SG + A Q +M
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 124 ERNCTRTVLSFNALLAAY-LHSKQYR---VVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
E T ++N L+ Y + K R +++ + +E G + V P++ ++N +++A+CK
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE--GNVDVGPNIRTFNVLVQAWCK 200
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF--EEGEKLWGQMGGKNLSPDI 237
K E A ++++ME+ GV PD +T+NT+ +G E E + + + P+
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
R+ + G E + + + F++ M++ V+ +L N++I GFV + D +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESM 357
+++ D T++T++ G ++ A V KE+ + A ++ V
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 358 LSEAKEIVE 366
+A+E++E
Sbjct: 381 PKKAEELLE 389
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ V+ +LV +N++I F + + +L M++ V D+IT++T+++ + G E
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ +++ +M + PD +Y+ G K+ +A E L+ + + +P++ +I
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVI 406
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
G+ + G++D+A + F ++ K P+ TF TL+
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M E N V++++ ++ A+ + ++FKE+ + VKPD +Y+ + K + ++K
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHAYSILAKGYVRAK 379
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
+ A +LE + P+++ F T++ G + G ++ +++ +M +SP+I+++
Sbjct: 380 EPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 242 ARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
+ G K+ +A E LQ M VKP+ + + + + G DE+ K
Sbjct: 439 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 490
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ ++ + +G ++A Q+F EM + +++ L Y+ +K+ + E + + +
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI- 392
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ +P++V + TVI +C + + A+ + +M K GVSP++ TF TL+ G +
Sbjct: 393 -VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
+ E++ M G + P+ ++ V T E+ + + ++ KD++
Sbjct: 452 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 501
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 121/221 (54%), Gaps = 3/221 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + + G + A + ++M + + +V ++N L+ Y ++ I KE+
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 162 SVKPDLVSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
++ P++VSY T+I CK SK+ E+ + + +ME GVSP + +N L+DG ++G+ E+
Sbjct: 490 TM-PNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M K + ++ +YN + GL++ K EA + L E+ +K +KPD+F+ N++I
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
G+ GN+ + E+++S P T+ L+ ++G
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 21/278 (7%)
Query: 62 GIYEDT------VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPK-- 113
GIY + + L KQFR I++ + + SDF F +YGK+
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE-SDFRPSKF------MYGKAIQAAVK 191
Query: 114 -----RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
+ ++F+ M +V +N L+ K+ E++F E+ + P L+
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR-RLLPSLI 250
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+YNT+I +CK+ E + + E M+ + + P LITFNTLL GL+ G E+ E + +M
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
PD +++ G + +K A+ + VK + ++ + ++ EG +
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
++A++ G P++ + T++ C KGDL A
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y + G AR + M ++ L++N L+ + + E+ ++ +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK- 453
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P + +YN +I + + F+ +L+EME NG P+++++ TL++ L + E
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + M + +SP +R YN + G + K +A F +EM KK ++ +L + N +I G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G L EA+ EI + PD T+ +L+ G+++ I + +E+
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 11/327 (3%)
Query: 40 NLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFS 99
NLR L+ + +R T G+ +R + + F ++ S K FS
Sbjct: 61 NLRVLLQQ-------NRIETARGVLSSLLR--SDSTPFASPKELFSAFSLSSPSLKHDFS 111
Query: 100 ARLIT-LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
L++ L +S M A +F + + S LL + +KQ+RV +F +
Sbjct: 112 YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
E +P Y I+A K + + M+ + + P + +N L+DGL R
Sbjct: 172 -ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+ E+L+ +M + L P + +YN + G ++ + + M+ ++P L + N +
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+KG G +++A+ E++ PD TF+ L + A+ V + ++
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIV 365
++ A ++++ L E + +A+EI+
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEIL 377
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P+ V YNT+I +C+ A +E MEK G+ PD + +N L+ G E EK
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M K +SP + +YN + G + + + + L+EME P++ S +I
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
L EA+ ++E P + L+ C KG ++ A KE+ +
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 345 LQLVVDKLVSESMLSEAKEIV 365
++D L LSEA++++
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLL 587
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 5/197 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ YG +G +R +++EM +R+ + L LL + + + ER+F GE+
Sbjct: 605 LISGYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISLCTKEGIELTERLF----GEM 659
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S+KPDL+ YN V+ + E A ++ ++M + + D T+N+L+ G G+ E
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M + + P+ +YN + G K A + +EM++K D+ N ++ G
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 282 FVNEGNLDEAKKWFGEI 298
E EA+ E+
Sbjct: 780 LKEEWRSKEAEIVISEM 796
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +G A + E+ + V ++N+L++ Y + + +++E+
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS- 628
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP L +Y+ +I + C + E + EM + PDL+ +N +L G E+
Sbjct: 629 GIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L QM K++ D +YN+ +LG K E + EM ++++P+ + N I+KG
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Query: 282 FVNEGNLDEAKKWFGEIEK 300
+ A W+ E+++
Sbjct: 745 HCEVKDYMSAYVWYREMQE 763
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ Y G ++A + +M E++ ++N+L+ L + V + E+
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR- 729
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++P+ +YN ++K C+ K + SA EM++ G D+ N L+ GL E R +E
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 222 EKLWGQMGGKNL 233
E + +M G+ L
Sbjct: 790 EIVISEMNGRML 801
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQK--QYSDFSKEGFSARLITLYGK-SGMPK 113
++ +Y + + AK + + +++ K + FS+E F L+ +YG +G
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEE-FFYNLMRIYGNLAGRIN 149
Query: 114 RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
RA ++ MP+ C + SFN +L + +K + + +IF P ++ V+ D N +
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEIDACCLNIL 208
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
IK C+S E+A+ +L+E + P+++TF+ L+ G +G+FEE KL +M + +
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
PD ++N + GL + + E ++ L+ M+ K +P+ + ++ G +++ EAK+
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKE 328
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
++ P ++ +V LCE + V++++ N
Sbjct: 329 MMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 73 GAKQFRGVIDILEHQKQYSDFSKEGFSAR-------------LITLYGKSGMPKRARQMF 119
+K F ++++L K + + K SA LI +SG + A Q+
Sbjct: 166 SSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225
Query: 120 DEMPERNCTRTVLSFNALLAAYLH----SKQYRVVERIFKEVPGEISVKPDLVSYNTVIK 175
DE P++ V++F+ L+ + + + ++++ER+ KE ++PD +++N +I
Sbjct: 226 DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE-----RIEPDTITFNILIS 280
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
K E + +LE M+ G P+ T+ +L GL + R E +++ QM + P
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
SY +LGL K E L++M P +++ V++ N D
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDD 394
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
A+ +L M G P +FN +L+ L + F+E K++ + D N +
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
GL A++ L E ++ +P++ + + +I+GF N+G +EA K +EK +P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
D TF L+ L +KG ++ ID+++ + C Q V+ L+ + EAKE++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y V L K F ++ ++ ++ +I +SG +A ++F++M
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK 416
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
E C T +FN L+ Y + R+ + + ++P+ + N +++A+C +
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL-WGQMGGKNLSPDIRSYNA 242
E A +++ +M+ GV PD++TFNTL G E + +M + P++R+
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ G E K EA+ F M++ V P+LF N++IKGF+N ++D + +E+
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
PD TF+TL+ GD+K ++ ++
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
KP L++Y T++ A + K F S +S++ ++EKNG+ PD I FN +++ G ++ K
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-VKPDLFSLNAIIKGF 282
++ +M P ++N + G K E+ L M + + ++P+ + N +++ +
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID-VVKEIFNTRCRVG 341
N+ ++EA +++ PD TF TL G TA D ++ + + + +
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+V+ E + EA K HP
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ V P+L +N++IK F + +++ ME+ GV PD++TF+TL++ + G +
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E+++ M + PDI +++ G A + +A + L +M K V+P++ II
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Query: 280 KGFVNEGNLDEA----KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
G+ + G + +A KK G + S P+ T+ TL+ E A +++K++
Sbjct: 679 SGWCSAGEMKKAMQVYKKMCGIVGLS---PNLTTYETLIWGFGEAKQPWKAEELLKDMEG 735
Query: 336 TRCRVGAPLLQLVVD 350
+QL+ D
Sbjct: 736 KNVVPTRKTMQLIAD 750
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++ D M E V++F+ L+ A+ + E I+ ++ E + PD+ +++ + K
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML-EGGIDPDIHAFSILAKG 645
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG-KNLSP 235
+ ++ E A +L +M K GV P+++ + ++ G + G ++ +++ +M G LSP
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSP 705
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
++ +Y + G K+ +A E L++ME K+V P ++ I G+ + G
Sbjct: 706 NLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
D+ + L++GL GR +E ++ + + P + +Y + L +K + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
++EK +KPD NAII GNLD+A K F ++++S P +TF TL+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 62 GIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKRA 115
G+ D V + V D+ ++ Y+D + G + Y ++G P++A
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK 175
Q+ ++M + V+ + +++ + + + + +++K++ G + + P+L +Y T+I
Sbjct: 656 EQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW 715
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
F ++K A +L++ME V P T + DG + G
Sbjct: 716 GFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+ A S+ + + G P LIT+ TL+ L + F L ++ L PD +NA
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ + +A++ ++M++ KP + N +IKG+ G L+E+ + + + E
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 304 -DPDKNTFATLVPFLCEKGDLKTAIDVV 330
P+ T LV C + ++ A ++V
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIV 483
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 141/293 (48%), Gaps = 4/293 (1%)
Query: 87 QKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK- 145
QKQ G ++LI++ GK G + A +F EM C +NAL+ A+LH++
Sbjct: 124 QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD 183
Query: 146 QYRVVERI---FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ + +E++ ++ G +P++V+YN +++AF +S + ++ ++++ + VSPD+
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
TFN ++D G +E E + +M PDI ++N + +++ + + +
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ + KP L + N++I + +D+A+ F ++ P T+ ++ G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 323 LKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ A ++ +E+ + + A L +++ + EA ++ R HP
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + +SG + +F ++ + V +FN ++ AY + + +E + +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN- 272
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF-EE 220
KPD++++N +I ++ K + FE + + ++ P L TFN+++ Y + R ++
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN-YGKARMIDK 331
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
E ++ +M N P +Y ++ A E +E+ + D +LNA+++
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ G EA K F PD +T+ L K D+K + ++
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT-KADMKEQVQIL 440
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +YG G RAR++F+E+ E + + NA+L Y + Y +++F
Sbjct: 354 MIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASA-F 412
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
V PD +Y + KA+ K+ + E ++++MEK+G+ P+
Sbjct: 413 RVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 141/293 (48%), Gaps = 4/293 (1%)
Query: 87 QKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK- 145
QKQ G ++LI++ GK G + A +F EM C +NAL+ A+LH++
Sbjct: 124 QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD 183
Query: 146 QYRVVERI---FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ + +E++ ++ G +P++V+YN +++AF +S + ++ ++++ + VSPD+
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
TFN ++D G +E E + +M PDI ++N + +++ + + +
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ + KP L + N++I + +D+A+ F ++ P T+ ++ G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 323 LKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ A ++ +E+ + + A L +++ + EA ++ R HP
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + +SG + +F ++ + V +FN ++ AY + + +E + +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN- 272
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF-EE 220
KPD++++N +I ++ K + FE + + ++ P L TFN+++ Y + R ++
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN-YGKARMIDK 331
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
E ++ +M N P +Y ++ A E +E+ + D +LNA+++
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ G EA K F PD +T+ L K D+K + ++
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT-KADMKEQVQIL 440
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +YG G RAR++F+E+ E + + NA+L Y + Y +++F
Sbjct: 354 MIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASA-F 412
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
V PD +Y + KA+ K+ + E ++++MEK+G+ P+
Sbjct: 413 RVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
+L+ +K D +SA +I + K+ +A +F++M ++ + +++L Y
Sbjct: 314 VLDMEKHGIDPDVYVYSA-IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ +FKE E ++ D V YN A K E A+ + EM G++PD+
Sbjct: 373 QMGNFSEAYDLFKEF-RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
I + TL+ G +G+ + L +M G +PDI YN GLA EA E L+
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
ME + VKP + N +I+G ++ G LD+A+ ++ +E + D A++V C G
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGC 547
Query: 323 LKTAID 328
L A +
Sbjct: 548 LDHAFE 553
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 18/265 (6%)
Query: 70 RLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTR 129
R+ ++ R +IL +K D +I Y + PK+A +F++M R+
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTI---MINTYCRLNEPKQAYALFEDMKRRDVKP 668
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
V++++ LL + R +E V PD+V Y +I +C + ++
Sbjct: 669 DVVTYSVLLNSDPELDMKREME--------AFDVIPDVVYYTIMINRYCHLNDLKKVYAL 720
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
++M++ + PD++T+ LL + L +M ++ PD+ Y +
Sbjct: 721 FKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCK 773
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
GEA +M + V PD A+I G L EAK F + +S PD
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP 833
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIF 334
+ L+ C G + A+ +VKE+
Sbjct: 834 YTALIAGCCRNGFVLKAVKLVKEML 858
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 82 DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
D+L+ + ++ +LI + + ++AR+ F+ + + + ++ ++ Y
Sbjct: 586 DLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTY 645
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
+ + +F+++ VKPD+V+Y+ ++ + + + M EME V PD
Sbjct: 646 CRLNEPKQAYALFEDMKRR-DVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPD 697
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
++ + +++ ++ L+ M + + PD+ +Y L K +
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-------KNKPERNLSR 750
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
EM+ DVKPD+F +I G+L EAK+ F ++ +S DPD + L+ C+ G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 322 DLKTA 326
LK A
Sbjct: 811 YLKEA 815
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
K+ +F +M R V+++ LL +K R + R K VKPD+ Y
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLL----KNKPERNLSREMKA----FDVKPDVFYYTV 766
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
+I CK A + ++M ++GV PD + L+ G +E + ++ +M
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+ PD+ Y A + G +AV+ ++EM +K +KP SL+A+
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 164 KPDL-VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
K DL ++Y V++ C E A S++ +MEK+G+ PD+ ++ +++G +
Sbjct: 287 KSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAV 346
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
++ +M K + ++ L EA + +E + ++ D N
Sbjct: 347 DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA 342
G ++EA + F E+ PD + TL+ C +G A D++ E+ T
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 343 PLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ ++ L + + EA E +++ + P
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 5/242 (2%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
AL+ AY + + IF + PD+ + N +I S + V E+E
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ G+ D T+ ++ L+ EE EKL ++ Y + GL + + T
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTD 269
Query: 255 EAVEFLQEMEKKDV---KPDL-FSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
A LQ + ++ K DL + +++G E +++A+ ++EK DPD +
Sbjct: 270 IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV-ELGK 369
+ ++ + ++ A+DV ++ R R+ ++ ++ SEA ++ E +
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 370 TN 371
TN
Sbjct: 390 TN 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL----ITFNTLLDGLYAEGRFEEGEK 223
V Y I+ C +++ + A +L+ + + D I + ++ GL E R E+ E
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ M + PD+ Y+A + G +AV+ +M KK + + +++I++ +
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
GN EA F E ++ D+ + L + G ++ AI++ +E+
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A EM +R + +++FN L+ Y + V + +++ KPD+++++ +I
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH-GFKPDVITFSLII 502
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C++K + A +EM + G+ P+ IT+N L+ + G + KL+ +M LS
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD+ +YNA + +K +A E L+ M + +KPD F+ + +IK G EA++
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 295 FGEIEKSENDPDKNT 309
F IE+ PD T
Sbjct: 623 FSSIERHGCVPDSYT 637
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++FD R + L+ A L+++++ +R K++ G + + SYN VI
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM-GVDGLLSSVYSYNAVIDC 434
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
CK++ E+A L EM+ G+SP+L+TFNT L G G ++ + ++ PD
Sbjct: 435 LCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPD 494
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+ +++ + L K+ +A + +EM + ++P+ + N +I+ + G+ D + K F
Sbjct: 495 VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 297 EIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+++++ PD + + C+ +K A +E+ T R+G
Sbjct: 555 KMKENGLSPDLYAYNATIQSFCKMRKVKKA----EELLKTMLRIG 595
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P +A ++ E++ + ++A+L ++ + + +++ GE PD ++N
Sbjct: 301 PCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI-GERGYIPDSSTFN 359
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+ K + + GV P + L+ L RF EG++ QMG
Sbjct: 360 AAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
L + SYNA + L ++ A FL EM+ + + P+L + N + G+ G++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV--- 476
Query: 292 KKWFGEIEK---SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
KK G +EK PD TF+ ++ LC ++K A D KE+
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ +KP YN VI A KS + A ++M +G PD T+N L+ G+ +G +E
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+L QM + P++ +Y + G + + EA++ L+ M + + P+ ++ +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 281 G 281
G
Sbjct: 294 G 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
G+ P +N ++D L + + QM PD +YN + G+ + EA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ +++ME++ +P++F+ +I GF+ G +DEA K + + +P++ T T V
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
K+ F +G + T+ G G K+ ++ DEM C +++N L+ +Y +
Sbjct: 355 KRQPGFKHDGHT--YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+F ++ E KPD V+Y T+I K+ + A+ M + M+ G+SPD T
Sbjct: 413 NYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ +++ L G KL+ +M + +P++ +YN + A + A++ ++M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+PD + + +++ + G L+EA+ F E+++ PD+ + LV + G+++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
A + + + R P ++ + + ++EA E+++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
F+ Y V L AKQF + +L+ + RLI YG++ A
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+F++M E C +++ L+ + + + +++ + + PD +Y+ +I
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINC 478
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR-FEEGEKLWGQMGGKNLSP 235
K+ +A + EM G +P+L+T+N ++D L+A+ R ++ KL+ M P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFEP 537
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D +Y+ + L EA EM++K+ PD ++ + GN+++A +W+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+ + P+ T +L+ + A ++++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 79 GVIDI---LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF 134
G +DI + + Q S + F+ + +I GK+G A ++F EM ++ CT ++++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N ++ + ++ Y+ ++++++ +PD V+Y+ V++ E A ++ EM+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ PD + L+D G E+ + + M L P++ + N+ L K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 255 EAVEFLQEMEKKDVKPDL 272
EA E LQ M ++P L
Sbjct: 627 EAYELLQNMLALGLRPSL 644
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
K+ F +G + T+ G G K+ ++ DEM C +++N L+ +Y +
Sbjct: 355 KRQPGFKHDGHT--YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+F ++ E KPD V+Y T+I K+ + A+ M + M+ G+SPD T
Sbjct: 413 NYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ +++ L G KL+ +M + +P++ +YN + A + A++ ++M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+PD + + +++ + G L+EA+ F E+++ PD+ + LV + G+++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
A + + + R P ++ + + ++EA E+++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
F+ Y V L AKQF + +L+ + RLI YG++ A
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+F++M E C +++ L+ + + + +++ + + PD +Y+ +I
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINC 478
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR-FEEGEKLWGQMGGKNLSP 235
K+ +A + EM G +P+L+T+N ++D L+A+ R ++ KL+ M P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFEP 537
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D +Y+ + L EA EM++K+ PD ++ + GN+++A +W+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+ + P+ T +L+ + A ++++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 79 GVIDI---LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF 134
G +DI + + Q S + F+ + +I GK+G A ++F EM ++ CT ++++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N ++ + ++ Y+ ++++++ +PD V+Y+ V++ E A ++ EM+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ PD + L+D G E+ + + M L P++ + N+ L K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 255 EAVEFLQEMEKKDVKPDL 272
EA E LQ M ++P L
Sbjct: 627 EAYELLQNMLALGLRPSL 644
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S+ PD+ SYNTVI+ FC+ K E A+ + EM+ +G S L+T+ L+D G+ +E
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGL--AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+M L D+ Y + + G E G+A+ F + +E+ D P + N +I
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL-FDEVLERGD-SPCAITYNTLI 289
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
+GF G L EA + F + + P+ T+ L+ LC G K A+ ++ +
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A ++++KL + ++++A EIVEL K R P
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
++A ++ +EM C+ +++++ L+ A+ + + KE+ + ++ DLV Y +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYTS 252
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
+I+ FC + ++ +E+ + G SP IT+NTL+ G G+ +E +++ M +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
+ P++ +Y + GL KT EA++ L M +KD +P+ + N II +G + +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+ ++K PD T+ L+ LC KGDL A
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 3/276 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + G R + +FDE+ ER + +++N L+ + Q + IF E E
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIER 311
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+P++ +Y +I C + A+ +L M + P+ +T+N +++ L +G +
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD--VKPDLFSLNAII 279
++ M + PD +YN L GL + EA + L M K PD+ S NA+I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G E L +A + + + D+ T L+ + GD+ A+++ K+I +++
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ ++D ML+ AK ++ + + P
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 89 QYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
Y+D ++A LI K +A ++D + E+ ++ N LL + L +
Sbjct: 418 SYTDPDVISYNA-LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
++K++ V+ +Y +I FCK+ + A +L +M + + P + +N L
Sbjct: 477 KAMELWKQISDSKIVRNS-DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
L L EG ++ +L+ +M N PD+ S+N + G A L M + +
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
PDLF+ + +I F+ G LDEA +F ++ S +PD + +++ + +G+ +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 329 VVKEIFNTRCRVGAPLLQLVVDKLVSES 356
+VK++ + + L V+D + + S
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS-VKPD 166
K G+ A ++ + M +R +++N LL ++ + + S PD
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++SYN +I CK A+ + + + + + D +T N LL+ G + +LW
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
Q+ + + +Y A + G A L +M +++P +F N ++ EG
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+LD+A + F E+++ N PD +F ++ + GD+K+A
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
K+ F +G + T+ G G K+ ++ DEM C +++N L+ +Y +
Sbjct: 355 KRQPGFKHDGHT--YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+F ++ E KPD V+Y T+I K+ + A+ M + M+ G+SPD T
Sbjct: 413 NYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ +++ L G KL+ +M + +P++ +YN + A + A++ ++M+
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+PD + + +++ + G L+EA+ F E+++ PD+ + LV + G+++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
A + + + R P ++ + + ++EA E+++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
F+ Y V L AKQF + +L+ + RLI YG++ A
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+F++M E C +++ L+ + + + +++ + + PD +Y+ +I
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINC 478
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR-FEEGEKLWGQMGGKNLSP 235
K+ +A + EM G +P+L+T+N ++D L+A+ R ++ KL+ M P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQNALKLYRDMQNAGFEP 537
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D +Y+ + L EA EM++K+ PD ++ + GN+++A +W+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+ + P+ T +L+ + A ++++ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 79 GVIDI---LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF 134
G +DI + + Q S + F+ + +I GK+G A ++F EM ++ CT ++++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N ++ + ++ Y+ ++++++ +PD V+Y+ V++ E A ++ EM+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQ-NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ PD + L+D G E+ + + M L P++ + N+ L K
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 255 EAVEFLQEMEKKDVKPDL 272
EA E LQ M ++P L
Sbjct: 627 EAYELLQNMLALGLRPSL 644
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V FN L+ + +++F E+ S++P +VS+NT+I +CK + +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
+MEK+ PD+ T++ L++ L E + + L+ +M + L P+ + + G +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ E Q+M K ++PD+ N ++ GF G+L A+ + + PDK T+
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 311 ATLVPFLCEKGDLKTAIDVVKEI 333
TL+ C GD++TA+++ KE+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEM 441
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH----SKQYRVVERIFKEV 157
L+ + K G A+++FDE+ +R+ TV+SFN L+ Y + +R+ ++ K
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS- 304
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+PD+ +Y+ +I A CK + A + +EM K G+ P+ + F TL+ G G
Sbjct: 305 ----RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ ++ + +M K L PDI YN + G A + M ++ ++PD +
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+I GF G+++ A + E++++ + D+ F+ LV +C++G + A ++E+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 84 LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
L+HQ + S + F+ + LI K A +FDEM +R + F L+ +
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ + +++ ++++ + ++PD+V YNT++ FCK+ +A ++++ M + G+ PD
Sbjct: 357 RNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
IT+ TL+DG G E ++ +M + D ++A + G+ E + +A L+E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
M + +KPD + ++ F +G+ K E++ + P T+ L+ LC+ G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 323 LKTAIDVVKEIFN 335
+K A ++ + N
Sbjct: 536 MKNADMLLDAMLN 548
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVV--ERIFKEVPG 159
LI + + G + A ++ EM + + F+AL+ K+ RV+ ER +E+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM--CKEGRVIDAERALREML- 477
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+KPD V+Y ++ AFCK ++ +L+EM+ +G P ++T+N LL+GL G+ +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ L M + PD +YN L G + + ++Q+ E V DL S +I
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGH--HRHANSSKRYIQKPEIGIVA-DLASYKSI- 593
Query: 280 KGFVNEGNLDEAKK 293
VNE LD A K
Sbjct: 594 ---VNE--LDRASK 602
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
E+ G ++ FN L++ EG + +K++ ++ ++L P + S+N + G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
E +MEK +PD+F+ +A+I E +D A F E+ K P+ F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP----LLQLVVDKLVSESMLSEAKEIVE 366
TL+ G+ ID++KE + G L +V+ L A+ IV+
Sbjct: 350 TLIHGHSRNGE----IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 136/291 (46%), Gaps = 6/291 (2%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
K+ F +G + T+ G G K+ ++ DEM C +++N L+ +Y +
Sbjct: 350 KRQPGFKHDGHT--YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA 407
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+ +F ++ E +PD V+Y T+I K+ + A+ M + M++ G+SPD T
Sbjct: 408 NYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ +++ L G +L+ +M G+ +P++ ++N + A + A++ ++M+
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+PD + + +++ + G L+EA+ F E+++ PD+ + LV + G++
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A + + R P ++ + +SEA +++ HP
Sbjct: 587 KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 79 GVIDI---LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF 134
G +DI + + Q + S + F+ + +I GK+G A ++F EM + CT +++F
Sbjct: 443 GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N ++A + ++ Y ++++++ +PD V+Y+ V++ E A + EM+
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQ-NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 561
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
+ PD + L+D G ++ + + M L P++ + N+ L +
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Query: 255 EAVEFLQEMEKKDVKPDL 272
EA LQ M + P L
Sbjct: 622 EAYNLLQSMLALGLHPSL 639
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 2/265 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A + DEM + ++ +N + ++ + + + F E+
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN- 267
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KPD V+Y ++I CK+ + AV M E +EKN P +NT++ G + G+F+E
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L + K P + +YN L L K EA++ +EM KKD P+L + N +I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDM 386
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
G LD A + ++K+ P+ T +V LC+ L A + +E+ C
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
++D L + +A ++ E
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYE 471
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G P++ R MF+E+ R S++ L+ + + +F + + V D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL-DT 587
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+YN VI FCK A +LEEM+ G P ++T+ +++DGL R +E L+ +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
K + ++ Y++ + G + EA L+E+ +K + P+L++ N+++ V
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
++EA F +++ + P++ T+ L+ LC+
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K G +A Q+ +EM + TV+++ +++ + +F+E +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK- 651
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ ++V Y+++I F K + A +LEE+ + G++P+L T+N+LLD L E
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ M +P+ +Y + GL +K +A F QEM+K+ +KP S +I G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
GN+ EA F + + PD + ++ L A + +E TR R G
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE---TR-RRG 827
Query: 342 APL 344
P+
Sbjct: 828 LPI 830
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 10/278 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS----KQYRVVERIFKEV 157
+I + K+ A +MF+ + + ++N ++ Y + + Y ++ER +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER--QRA 336
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
G I P +++YN ++ K + A+ + EEM+K+ +P+L T+N L+D L G+
Sbjct: 337 KGSI---PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGK 392
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ +L M L P++R+ N + L +K EA +EM+ K PD + +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
+I G G +D+A K + ++ S+ + + +L+ G + + K++ N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 338 CRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
C LL +D + + + + E K R+ P
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 37/269 (13%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
++ L+ A+ ++ +F+++ E+ +P + + T+I+ F K +SA+S+L+E
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQ-ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M+ + + D++ +N +D G+ + K + ++ L PD +Y + + L +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK-------------------- 292
EAVE + +EK P ++ N +I G+ + G DEA
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 293 ---------------KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
K F E++K + P+ +T+ L+ LC G L TA ++ +
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 338 CRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ ++VD+L L EA + E
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 137/315 (43%), Gaps = 2/315 (0%)
Query: 61 TGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFD 120
T Y + A +F +LE Q+ ++T K G A ++F+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 121 EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS 180
EM +++ + ++N L+ + + + ++ + + P++ + N ++ CKS
Sbjct: 368 EM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 181 KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ + A +M EEM+ +PD ITF +L+DGL GR ++ K++ +M + + Y
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 241 NARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
+ + + + + ++M ++ PDL LN + G ++ + F EI+
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 301 SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSE 360
PD +++ L+ L + G ++ + C + +V+D +++
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 361 AKEIVELGKTNRYHP 375
A +++E KT + P
Sbjct: 606 AYQLLEEMKTKGFEP 620
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 143/331 (43%), Gaps = 2/331 (0%)
Query: 34 DLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDF 93
D + +V + KF + + + Y + L A + +++ EH ++
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 94 SKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI 153
+I YG +G A + + + +V+++N +L + ++
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
F+E+ + + P+L +YN +I C++ ++A + + M+K G+ P++ T N ++D L
Sbjct: 366 FEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+ +E ++ +M K +PD ++ + + GL + +A + ++M D + +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++IK F N G ++ K + ++ PD T + + + G+ + + +EI
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
R A +++ L+ +E E+
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYEL 574
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI GK G A +++++M + +C + + +L+ + + + +I+K++ +
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ- 511
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PDL NT + K+ E +M EE++ PD +++ L+ GL G E
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L+ M + D R+YN + G K +A + L+EM+ K +P + + ++I G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
LDEA F E + + + +++L+ + G + A +++E+
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 342 APLLQLVVDKLVSESMLSEA 361
++D LV ++EA
Sbjct: 692 LYTWNSLLDALVKAEEINEA 711
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 9/263 (3%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH----SKQYRVVERIFKEVPGEISV 163
KS A MF+EM + CT ++F +L+ Y+V E++ +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-----DSDC 478
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+ + + Y ++IK F E + ++M SPDL NT +D ++ G E+G
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
++ ++ + PD RSY+ + GL E E M+++ D + N +I GF
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
G +++A + E++ +P T+ +++ L + L A + +E + R +
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 344 LLQLVVDKLVSESMLSEAKEIVE 366
+ ++D + EA I+E
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILE 681
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+P +Y T+I AF + +++ ++M++ G P + F TL+ G EGR +
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L +M +L DI YN + K A +F E+E +KPD + ++I
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
LDEA + F +EK+ P + T++
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK---AFCKSKVFESAVSM 189
S+N+LL + + +++I GE+SV S NT I+ K+ +
Sbjct: 100 SYNSLLLVMARCRNFDALDQIL----GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
++ M K P + TL+ A + L+ QM P + + + G A
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
E + A+ L EM+ + D+ N I F G +D A K+F EIE + PD+ T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTR 337
+ +++ LC+ L A+++ + + R
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNR 303
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE- 160
+++ K G K A + MP C V+S+N+L+ + + R + + +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 161 -ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
KPD+VS+N++ F K K+ + + M K SP+++T++T +D G +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQ 180
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
K + M LSP++ ++ + G AV +EM + + ++ + A+I
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
GF +G + A++ + + + +P+ + T++ ++GD A+ + ++ N R
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ +++ L L EA EIVE
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVE 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I + KSG + A + F M + V++F L+ Y + V ++KE+ +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR-RVR 228
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ ++V+Y +I FCK + A M M ++ V P+ + + T++DG + G +
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
K +M + + DI +Y + GL K EA E +++MEK D+ PD+ ++ +
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
G + A + ++ + +PD +T++ + + G L AI
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFE 184
+ C+ V++++ + + S + ++ + F + + ++ P++V++ +I +CK+ E
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD-ALSPNVVTFTCLIDGYCKAGDLE 215
Query: 185 SAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
AVS+ +EM + +S +++T+ L+DG +G + E+++ +M + P+ Y +
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
G + A++FL +M + ++ D+ + II G G L EA + ++EKS+
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
PD F T++ + G +K A+++ ++ L ++D + L EA
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 24/267 (8%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P + ++ NC L F AYL S+ Y P S+N
Sbjct: 21 PFTCNKHIHQLINSNCGILSLKF----LAYLVSRGY----------------TPHRSSFN 60
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+V+ CK + A ++ M + G PD+I++N+L+DG G + +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 232 N---LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
+ PDI S+N+ G + K E ++ M K P++ + + I F G L
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGEL 179
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLV 348
A K F +++ P+ TF L+ C+ GDL+ A+ + KE+ R + +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 349 VDKLVSESMLSEAKEIVELGKTNRYHP 375
+D + + A+E+ +R P
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 88 KQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
K + ++ S ++T Y K+G + A ++ EM + V+++ AL+ +
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
+ + E ++ + E V+P+ + Y T+I F + ++A+ L +M G+ D
Sbjct: 244 CKKGEMQRAEEMYSRMV-EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
+ + ++ GL G+ +E ++ M +L PD+ + + + AV
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
++ ++ +PD+ +L+ +I G G L EA +F IEK+ ND + L+ LC++G
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-IEKA-NDV---MYTVLIDALCKEG 417
Query: 322 DL 323
D
Sbjct: 418 DF 419
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 103 ITLYG-------KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK 155
IT YG +G K A ++ ++M + + ++ F ++ AY S + + ++
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
++ E +PD+V+ +T+I K+ A+ + N V + L+D L E
Sbjct: 363 KLI-ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKE 416
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G F E E+L+ ++ L PD Y + + GL + +A + M ++ + DL +
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I G ++G + EA++ F E+ S PD F L+ ++G++ A D++ ++
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 120/294 (40%), Gaps = 31/294 (10%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G +RA +M+ M E L + ++ + + ++ +
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ- 297
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ D+ +Y +I C + + A ++E+MEK+ + PD++ F T+++ + GR +
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK------------ 269
++ ++ + PD+ + + + G+A + EA+ + + DV
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 270 ------------------PDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
PD F + I G +GNL +A K + + D +
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
TL+ L KG + A V E+ N+ + + L++ E ++ A +++
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD + N I S ++ L + G +P +FN+++ + G+ + E +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD---VKPDLFSLNAIIKG 281
M PD+ SYN+ + G A L+ + KPD+ S N++ G
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
F LDE + G + K + P+ T++T + C+ G+L+ A+
Sbjct: 139 FSKMKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLAL 183
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 31/239 (12%)
Query: 58 RTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQ 117
R Y + L G + + +I+E ++ ++ Y KSG K A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQ-----------------YRV----------- 149
M+ ++ ER V++ + ++ + Q Y V
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDF 419
Query: 150 --VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
VER+F ++ E + PD Y + I CK A + M + G+ DL+ + T
Sbjct: 420 IEVERLFSKIS-EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
L+ GL ++G E +++ +M +SPD ++ + E A + L +M+++
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ LI+ G A ++ +M ER +++F+AL+ A++ + E++++E+
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
S+ P++ +Y+++I FC A MLE M + P+++T+NTL++G R +
Sbjct: 352 R-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+G +L+ +M + L + +Y + G + A ++M V P++ + N ++
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
G G L +A F +++S +PD T+ ++ +C+ G K
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 95 KEGFSARLITLYGK--SGMPKR-----ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
+ G L+T YG +G+ KR A + ++M V+ ++ ++ + +
Sbjct: 211 QRGCQPDLVT-YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+F E+ + V+P++++Y+++I C + A +L +M + ++P+L+TF+
Sbjct: 270 DDALNLFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+D +G+ + EKL+ +M +++ P+I +Y++ + G + + GEA + L+ M +KD
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
P++ + N +I GF +D+ + F E+ + + T+ TL+ + D A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 328 DVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V K++ + +++D L L++A + E + + P
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 101/207 (48%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++ +PD+V+ N+++ FC AV+++++M + G PD +TF TL+ GL+ +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E L +M + PD+ +Y A + GL T A+ L +ME ++ ++ + +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
+ D+A F E+E P+ T+++L+ LC G A ++ ++ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVE 366
++D V + L +A+++ E
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYE 347
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAA-YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
A + D+M E ++F L+ +LH+K V I + V + +PDLV+Y V
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV--QRGCQPDLVTYGAV 224
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
+ CK + A+++L +ME + +++ ++T++D L ++ L+ +M K +
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P++ +Y++ + L + +A L +M ++ + P+L + +A+I FV +G L +A+K
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 294 WFGEIEKSENDPDKNTFATLVPFLC 318
+ E+ K DP+ T+++L+ C
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFC 369
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A +F M + +++ F+ LL+A ++ +V F E + + +L +YN +I
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYNILI 120
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
FC+ A+++L +M K G PD++T N+LL+G R + L QM
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD ++ + GL + K EAV + M ++ +PDL + A++ G G+ D A
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
++E ++ + + ++T++ LC+ A+++ E+ N R ++ L +
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 355 ESMLSEAKEIVE 366
S+A ++
Sbjct: 301 YGRWSDASRLLS 312
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K+ + ++F EM +R +++ L+ + ++ + +FK++ +
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SV 457
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P++++YN ++ CK+ A+ + E ++++ + PD+ T+N +++G+ G+++ G
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 8/283 (2%)
Query: 90 YSDFSKEG------FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
Y D ++G F L+ + GK G + +F EM CT TV+S+N ++ A
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 144 SKQY-RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
SK + V F ++ + SV P +Y+ +I +CK+ E A+ +LEEM++ G P
Sbjct: 386 SKAHVSEVSSWFDKMKAD-SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
+ +L++ L R+E +L+ ++ + R Y + K EAV+ E
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
M+ + PD+++ NA++ G V G ++EA ++E++ D N+ ++ G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 323 LKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
+ AI++ + I ++ + ++ M EA ++
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 9/286 (3%)
Query: 38 EVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAK----QFRGVIDILEHQKQYSDF 93
E+N++ + FK A F+ Y +R L A+ +R + +++ + Y
Sbjct: 105 EINVK--IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVV--RNTYVSV 160
Query: 94 SKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI 153
S S L+ G++ M +A +F + R C T ++N+++ + Q+ V +
Sbjct: 161 SPAVLS-ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
+ E+ E PD ++Y+ +I ++ K +SA+ + +EM+ N + P + TLL +
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
G+ E+ L+ +M SP + +Y + GL + EA F ++M + + PD+
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
LN ++ G ++E F E+ P ++ T++ L E
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
LI Y K+ ++A + +EM E+ ++ +L+ A +K+Y +FKE+
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
G +S + Y +IK F K AV + EM+ G PD+ +N L+ G+ G
Sbjct: 475 GNVSSR----VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E L +M DI S+N L G A A+E + ++ +KPD + N +
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ F + G +EA + E++ + D T+++++
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI GK+G A + +M T V+ N L+ + + +F E+ G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM-GMW 367
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVS-MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
P +VSYNTVIKA +SK S VS ++M+ + VSP T++ L+DG R E+
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK--DVKPDLFSLNAI 278
L +M K P +Y + + L K+ A E +E+++ +V ++++ +
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV--M 485
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
IK F G L EA F E++ + PD + L+ + + G + A +++++ C
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
R ++++ + A E+ E K + P
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 85 EHQKQ---YSDFSKEG--------FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLS 133
+H+K Y++ EG +SA LI+ Y K G A ++FDEM + T
Sbjct: 212 QHEKVHEVYTEMCNEGDCFPDTITYSA-LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+ LL Y + +F+E+ P + +Y +IK K+ + A ++M
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK-K 252
++G++PD++ N L++ L GR EE ++ +MG +P + SYN + L K
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
E + +M+ V P F+ + +I G+ +++A E+++ P + +
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
L+ L + + A ++ KE+ V + + +++ LSEA ++
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G +A +++ EM ++N + +N ++ L S V F + V PD+
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG-LCSSGNMVAAYGFMCDMVKRGVNPDV 335
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+YNT+I A CK F+ A + M+ GV+PD I++ ++ GL G +
Sbjct: 336 FTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLS 395
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M +L P++ +N + G T A+ L M VKP++++ NA+I G+V G
Sbjct: 396 MLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGR 455
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
L +A E+ ++ PD T+ L+ C G L+ A + E+ C+
Sbjct: 456 LIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G ++A + EM E + +S+N L+ +F + + ++P+
Sbjct: 168 KAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM-NKYGIRPNR 226
Query: 168 VSYNTVIKAFCKSKVF-ESAVSMLEEM---EKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
V+ N ++ A C+ V + +LEE+ + D++ L+D + G + +
Sbjct: 227 VTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALE 286
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+W +M KN+ D YN + GL A F+ +M K+ V PD+F+ N +I
Sbjct: 287 VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC 346
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
EG DEA G ++ PD+ ++ ++ LC GD+ A
Sbjct: 347 KEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V P L+++N ++ CK+ E A ++ EM + G SP+ +++NTL+ GL + ++
Sbjct: 152 VIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL 211
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG---------------------------- 254
L+ M + P+ + N + L + G
Sbjct: 212 YLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTIL 271
Query: 255 -----------EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+A+E +EM +K+V D N II+G + GN+ A + ++ K
Sbjct: 272 MDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDV 329
+PD T+ TL+ LC++G A D+
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDL 357
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
++++++ C ++A+ + ++M +GV P LIT N LL+GL G E+ + L +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL- 288
SP+ SYN + GL +A+ M K ++P+ + N I+ +G +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 289 DEAKKWFGEIEKSE--NDPDKNTFATLVPFLCEK-GDLKTAIDVVKEIFNTRCRVGAPLL 345
+ KK EI S N P T++ C K G++ A++V KE+ + +
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 346 QLVVDKLVSESMLSEA 361
+++ L S + A
Sbjct: 304 NVIIRGLCSSGNMVAA 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 1/225 (0%)
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
SG A +M +R V ++N L++A ++ + + V PD +
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG-GVAPDQI 371
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
SY +I+ C A L M K+ + P+++ +N ++DG G + M
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
+ P++ + NA + G + +A EM + PD + N ++ G+L
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
A + + E+ + PD T+ LV LC KG LK A ++ I
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P+++ +N VI + + SA+S+L M GV P++ T N L+ G GR + +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M + PD +YN L A + EM ++ +PD+ + +++G
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+G L +A+ I+ + D VPFL
Sbjct: 523 KGRLKKAESLLSRIQATGITIDH------VPFL 549
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF-KEVPGEISVK 164
YG+ G A + + M V + NAL+ Y+ K R+++ + K +
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV--KGGRLIDAWWVKNEMRSTKIH 472
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD +YN ++ A C A + +EM + G PD+IT+ L+ GL +GR ++ E L
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 225 WGQMGGKNLSPD 236
++ ++ D
Sbjct: 533 LSRIQATGITID 544
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 151/382 (39%), Gaps = 91/382 (23%)
Query: 47 KFKKACDVDR------FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSA 100
K++KA V R F T Y + L A + + E K+ +
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF------ 154
++ + K+G+ ++AR+ F+EM E CT V+++ AL+ AYL +K+ +F
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 155 -----------------------------------KEVPG---------EISVKPDLVSY 170
K+VP + S +P++V+Y
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE-------- 222
++ FCKS E A +L+ M G P+ I ++ L+DGL G+ +E +
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 223 ---------------------------KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
K+ +M + +P++ Y + GL KT E
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
A + +Q ME+K +P++ + A+I GF G ++ + + P+ T+ L+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 316 FLCEKGDLKTAIDVVKEIFNTR 337
C+ G L A ++++E+ T
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTH 844
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 17/325 (5%)
Query: 53 DVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKE-GFSARLITLYGKSGM 111
+ + F T Y + L A F +D L + S +S L K +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYL----HSKQYRVVERIFKEVPGEISVKPDL 167
R +++ + M C + FN+L+ AY HS Y++++++ K G + P
Sbjct: 354 -GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK--CGHM---PGY 407
Query: 168 VSYNTVIKAFCKSK------VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V YN +I + C K + + A EM GV + I ++ L + G++E+
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +M G+ PD +Y+ L L K A +EM++ + D+++ ++
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F G +++A+KWF E+ + P+ T+ L+ + + A ++ + + + C
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
++D + +A +I E
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFE 612
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 114/266 (42%), Gaps = 17/266 (6%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + + EM ++ ++ + +Y + +E+ G+ + PD +Y+ V+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI-PDTSTYSKVL 490
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
C + E A + EEM++ G+ D+ T+ ++D G E+ K + +M +
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +Y A + KK A E + M + P++ + +A+I G G +++A +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 295 FGEIEKSENDPDKN----------------TFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
F + S++ PD + T+ L+ C+ ++ A ++ + C
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEI 364
+ ++D L L EA+E+
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEV 696
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 3/170 (1%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+P +YN +I+AF K+ +SA + EM + D T L G++ E
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L + +N PD Y + GL EA++FL M P++ + + ++ G +
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N+ L K+ + P F +LV C GD A ++K++
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 36/219 (16%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K G A ++ M E+ C V+++ A++ + + + + + G V P+
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM-GSKGVAPNY 814
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEK-------------------------------- 195
V+Y +I CK+ + A ++LEEM++
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 196 -NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG--GKNLSPDIRSYNARLLGLAVEKK 252
+ +P L + L+D L R E +L ++ L +YN+ + L + K
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
A + EM KK V P++ S ++IKG + EA
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
Query: 46 DKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL 105
D+ + C F + + V R G+ + V++ + + Y D L+
Sbjct: 234 DQLQNGCP--PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN---SLVNY 288
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ G + + + +++N LL + + + VE I + + S P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN-IMYQTSYCP 347
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
+++YN +I CK+++ A+ +M + PD++T+NT+L + EG ++ +L
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
G + P + +YN+ + GLA + +A+E +M + PD + ++I GF
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL 345
++EA + E N +T+ ++ LC+K +++ AI+VV+ + C+ +
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 346 QLVVDKLVSESMLSEA 361
+V + M SEA
Sbjct: 528 TAIVKGVEEMGMGSEA 543
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ L + RA ++ ++M C ++++N+L+ V + + +
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH- 308
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ + V+YNT++ + C + ++ +L M + P +IT+N L++GL
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRA 368
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ QM + PDI +YN L ++ E +A+E L ++ P L + N++I G
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+G + +A + + ++ + PD T +L+ C ++ A V+KE N +
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+LV+ L + + A E+VE+ T P
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 5/322 (1%)
Query: 43 KLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARL 102
KLV+ + V F + + + VR LA Q + IL +
Sbjct: 125 KLVEVMARHNQVPHFPSCSNL----VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMI 180
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I K G + A + ++M V+++N ++ R +K+ +
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD-QLQNG 239
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
P +++Y +++ C+ A+ +LE+M G PD++T+N+L++ G EE
Sbjct: 240 CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA 299
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ + L + +YN L L + E E L M + P + + N +I G
Sbjct: 300 SVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA 342
L A +F ++ + + PD T+ T++ + ++G + AI+++ + NT C G
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL 419
Query: 343 PLLQLVVDKLVSESMLSEAKEI 364
V+D L + ++ +A E+
Sbjct: 420 ITYNSVIDGLAKKGLMKKALEL 441
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 85/211 (40%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P S + +++ + + A+ +L M +G PD IT+N ++ L +G L
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
M PD+ +YN + + +A+ F ++ + P + + +++
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
A + ++ PD T+ +LV + C +G+L+ V++ I + +
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 345 LQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
++ L S E +EI+ + Y P
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 133/349 (38%), Gaps = 72/349 (20%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDF-SKEGFSARLITLYGKSGMPKRA 115
FR Y+ + +L G+K F + +L H K + E +I +G+ +P RA
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 116 RQMFDEMPERNCTRTV----------------------------------LSFNALLAAY 141
MFDEMP+ C RTV ++N L+
Sbjct: 103 LHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGC 162
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK-NGVSP 200
S + ++F E+ + VKP V++ T+I CK + A+ M +M K GV P
Sbjct: 163 SQSGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 201 -----------------------------------DLITFNTLLDGLYAEGRFEEGEKLW 225
D ++TL+ L GR E +
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M K PD +YN + G VE + A L EM +K +KPD+ S N I+ F
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRI 341
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+EA F ++ + PD ++ + LCE + A ++ E+
Sbjct: 342 KKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 131/319 (41%), Gaps = 40/319 (12%)
Query: 85 EHQKQYSDFSKEGFSARLITLYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
E +F K I ++G +SG A ++FDEM ++ T ++F L+
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK----------------------S 180
+ + ++ ++ V+P + Y ++IKA C+ +
Sbjct: 199 KDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 181 KVFESAVS-------------MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++ + +S +LEEM + G PD +T+N L++G E E ++ +
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K L PD+ SYN L KK EA ++M ++ PD S + G
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG-APLLQ 346
+EA E+ P ++ + LCE G L+ V+ + R G A +
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH--RGIAGDADVWS 436
Query: 347 LVVDKLVSESMLSEAKEIV 365
+++ + E ++S++ +++
Sbjct: 437 VMIPTMCKEPVISDSIDLL 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 99 SARLITLYGKSGMPKRARQMF------DEMPERNCTRTVLSFNALLAAYLHSKQYRVVER 152
S RL +L + P A ++F P+R ++L ++ ++ SK + +++
Sbjct: 9 SFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQ 68
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL 212
+ + + + P + + VI F + K+ A+ M +EM + + + N+LL L
Sbjct: 69 VLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSAL 128
Query: 213 YAEGRFEEGEKLWGQMG--GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
G E+ ++ + GK PD +YN + G + +A++ EM KK VKP
Sbjct: 129 LKCGELEKMKERLSSIDEFGK---PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP 185
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDV 329
+ +I G + + EA K ++ K P + +A+L+ LC+ G+L A +
Sbjct: 186 TGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Query: 330 VKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
E + + +V A + ++ L+ +E I+E
Sbjct: 246 KDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILE 282
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI++Y K M A + D M ++++N+ + + + R R+F+E+ ++
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ + V+Y T+I +C+ + A+ + E ME G SP ++T+N++L L +GR E
Sbjct: 304 T--ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L +M GK + PD + N + + AV+ ++M + +K D++S A+I G
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 282 FVNEGNLDEAK-KWFGEIEKSENDPDKNTFATLV 314
F L+ AK + F IEK + P T++ LV
Sbjct: 422 FCKVLELENAKEELFSMIEKGFS-PGYATYSWLV 454
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 10/229 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY----LHSKQYRVVERIFKEV 157
L+ KSG P++A ++ EM E+ + ++N L++ Y +H + V +R+ +
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERS- 267
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
V P++V+YN+ I F + A + E+ K+ V+ + +T+ TL+DG
Sbjct: 268 ----GVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMND 322
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+E +L M + SP + +YN+ L L + + EA L EM K ++PD + N
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+I + ++ A K ++ +S D ++ L+ C+ +L+ A
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 22/286 (7%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLS------------------FNALLAA 140
S ++I + K K A Q+ D++ +R + L F+ L+
Sbjct: 83 SWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIY 142
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
Y + +F+++ +KP L + ++ + K ++ ++ + ++M K GV
Sbjct: 143 YAKAGMINDSIVVFEQIRS-CGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVA 201
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
++ +N L+ G E+ EKL +M K + PDI +YN + + EA+
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
ME+ V P++ + N+ I GF EG + EA + F EI K + + T+ TL+ C
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRM 320
Query: 321 GDLKTAIDVVKEIFNTR-CRVGAPLLQLVVDKLVSESMLSEAKEIV 365
D+ A+ ++E+ +R G ++ KL + + EA ++
Sbjct: 321 NDIDEALR-LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y + A ++ + M R + V+++N++L + R R+ E+ G+
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK- 371
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD ++ NT+I A+CK + SAV + ++M ++G+ D+ ++ L+ G E
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ M K SP +Y+ + G + K E + L+E EK+ + D+ +I+
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+D AK F +EK D F T+ G + A + ++N R V
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Query: 342 APL 344
L
Sbjct: 552 LKL 554
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 85 EHQKQYSDFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
E ++ + D + GF+ LI Y K G+ A + DEM T ++N +
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
A + + + PD+VSYNT++ + K F A + +++ +
Sbjct: 351 CALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
P ++T+NTL+DGL G E ++L +M + + PD+ +Y + G A E
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-PDKNTFATLVPFL 317
EM +K +KPD ++ G + G+ D+A + E+ +++ PD + + L
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 318 CEKGDLKTAIDVVKEIFNTRCRVG 341
C+ G+L AI+ ++IF RVG
Sbjct: 526 CKVGNLVKAIEFQRKIF----RVG 545
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 112/234 (47%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + K+G A +++DEM + ++ L R+ +E+
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PDL YN I CK A+ ++ + G+ PD +T+ T++ G G+F+
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ +M K L P + +Y + G A + +A ++ EM+K+ V+P++ + NA++ G
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
GN+DEA ++ ++E+ P+K ++ L+ C+ + + + KE+ +
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV-PGEISVKPDLVSYNTV 173
AR++ M + V+S+N L+ Y+ ++ +F ++ G+I P +V+YNT+
Sbjct: 362 ARELLSSMAAPD----VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI--HPSIVTYNTL 415
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
I C+S E A + EEM + PD+IT+ TL+ G G +++ +M K +
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK-PDLFSLNAIIKGFVNEGNLDEAK 292
PD +Y R +G + +A +EM D PDL N I G GNL +A
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
++ +I + PD T+ T++ E G K A ++ E+ R
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 6/253 (2%)
Query: 84 LEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
LE +++ +FS+ ++ LI + K+G + AR+ +M T SFN L+ Y
Sbjct: 262 LEMKRRNIEFSEVTYNI-LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+ + E+ + P +YN I A C + A +L M +PD++
Sbjct: 321 QGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVV 375
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
++NTL+ G G+F E L+ + ++ P I +YN + GL A +EM
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
+ + PD+ + ++KGFV GNL A + + E+ + PD + T GD
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 324 KTAIDVVKEIFNT 336
A + +E+ T
Sbjct: 496 DKAFRLHEEMVAT 508
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + + N V+K S++ A ++ E M ++G+ P +ITFNT+LD + G E +K+
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
W +M +N+ +YN + G + K EA F +M + +S N +I+G+
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+G D+A E+ + P +T+ + LC+ G + A +++ +
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ + PD V+Y TVI+ + ++ F+ A ++ +EM + + P +IT+ L+ G GR E+
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M + + P++ ++NA L G+ EA +L +ME++ + P+ +S +I
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ +E K + E+ E +PD T L L
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 117/297 (39%), Gaps = 40/297 (13%)
Query: 105 LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVK 164
+Y K M ++ F++M + +V + N +L S+ ++ E E +
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVY-ETMIEHGIM 235
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P ++++NT++ + K+ E + EM++ + +T+N L++G G+ EE +
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 225 --------------------------------WG---QMGGKNLSPDIRSYNARLLGLAV 249
WG +M + P +YN + L
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+ +A E L M PD+ S N ++ G++ G EA F ++ + P T
Sbjct: 356 FGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ TL+ LCE G+L+ A + +E+ +V V LS A E+ +
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI---S 162
Y ++G K AR ++DEM + +V+++ L+ Y H+K R+ E+ F + E+
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLI--YGHAKAGRL-EQAF-QYSTEMKKRG 615
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V+P+++++N ++ CK+ + A L +ME+ G+ P+ ++ L+ ++EE
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV 675
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
KL+ +M K + PD ++ A L + ++ E VEFL+ +
Sbjct: 676 KLYKEMLDKEIEPDGYTHRALFKHLEKDHESRE-VEFLERL 715
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI LY K G +A ++ M E + +++ ++ ++ K + +F+++ E
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE- 548
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KPD++ YN +I AFC + A+ ++EM+K P TF ++ G G
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ M P + ++N + GL +++ +AVE L EM V + + I++G
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ + G+ +A ++F ++ D D T+ L+ C+ G +++A+ V KE+
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ + +++D + EA ++++ K P
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 36/299 (12%)
Query: 63 IYEDTVRRLAGAKQF-RGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDE 121
+Y + + G R + + E QK + F +I Y KSG +R+ ++FD
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP-IIHGYAKSGDMRRSLEVFDM 614
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP----------------GEISVKP 165
M C TV +FN L+ + +Q I E+ G SV
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 166 ------------------DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
D+ +Y ++KA CKS +SA+++ +EM + + +N
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+DG G E L QM + + PDI +Y + + + A + ++EME
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
VKP++ + +IKG+ ++A + E++ PDK + L+ L + + A
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 7/301 (2%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF 98
+NL V K KA +V R + G+ + F + D + D KEG
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 99 SA------RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER 152
+I+ + G RA Q EM + T +F ++ Y S R
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL 212
+F ++ P + ++N +I + + E AV +L+EM GVS + T+ ++ G
Sbjct: 611 VF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 213 YAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDL 272
+ G + + + ++ + L DI +Y A L + A+ +EM +++ +
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 273 FSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
F N +I G+ G++ EA +++K PD +T+ + + + GD+ A ++E
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 333 I 333
+
Sbjct: 790 M 790
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 126/278 (45%), Gaps = 7/278 (2%)
Query: 95 KEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
+EG L+T + K+G + A FDE + T + ++ A+ +
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
E + +E+ E + + Y+T++ + + + + + +++ G +P ++T+ L
Sbjct: 432 RAEALVREMEEE-GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
++ G+ + ++ M + + ++++Y+ + G K A ++M K+ +
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
KPD+ N II F GN+D A + E++K + P TF ++ + GD++ +++
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 329 VVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
V + C +++ LV + + +A EI++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
++I + ++ +RA + EM E + ++ ++ Y + +FK +
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK- 476
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E P +V+Y +I + K A+ + M++ GV +L T++ +++G +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
++ M + + PD+ YN + A++ ++EM+K +P + II
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G+ G++ + + F + + P +TF L+ L EK ++ A++++ E+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 96/229 (41%), Gaps = 1/229 (0%)
Query: 68 VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNC 127
+ L +Q ++IL+ + E +++ Y G +A + F +
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
+ ++ ALL A S + + + KE+ + V YN +I + + A
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV-YNILIDGWARRGDVWEAA 749
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
++++M+K GV PD+ T+ + + G + +M + P+I++Y + G
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
A +A+ +EM+ +KPD + ++ ++ ++ EA + G
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSG 858
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/151 (18%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
+++ +S E++ K P F ++ G + + +M + ++P R Y +
Sbjct: 294 WQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 349
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ AV + EA+ +++M+++ ++ L + + I+ GF G+ + A WF E ++
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH 409
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ + + ++ C+ +++ A +V+E+
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREM 440
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
++I + G+ AR + +MPE+ F L+ +Y + + +IF+++ +
Sbjct: 155 KMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK-D 213
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ V+ + SYN++ K + + A +M GV P T+N +L G + R E
Sbjct: 214 LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLET 273
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ + M + +SPD ++N + G KK EA + EM+ + P + S +IK
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
G++ +D+ + F E+ S +P+ T++TL+P LC+ G + A +++K +
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMM 387
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE- 160
LI YGK+G+ + + ++F +M + RT+ S+N+L L +Y + +R F ++ E
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 161 ---------------------------------ISVKPDLVSYNTVIKAFCKSKVFESAV 187
+ PD ++NT+I FC+ K + A
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
+ EM+ N + P ++++ T++ G A R ++G +++ +M + P+ +Y+ L GL
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 248 AVEKKTGEAVEFLQEMEKKDVKP 270
K EA L+ M K + P
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAP 393
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A + F++M R + +FN ++ + K+ E++F E+ G + P +VSY T+I
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN-KIGPSVVSYTTMI 332
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
K + + + + EEM +G+ P+ T++TLL GL G+ E + + M K+++
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 235 PDIRSYNARLLGLAVEKKTGE---AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P S +L L + K G+ A E L+ M +V + +I+ + A
Sbjct: 393 PKDNSIFLKL--LVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRA 450
Query: 292 KKWFGE-IEKS---------ENDPDKNTFATLVPFLCEKGDLKTA 326
K IEK E +P + + ++ +LC G A
Sbjct: 451 IKLLDTLIEKEIILRHQDTLEMEP--SAYNPIIEYLCNNGQTAKA 493
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 15/322 (4%)
Query: 50 KACDVDRFRTKTGIY--EDTVRRLAGAKQFRGVIDILEHQ--------KQYSDFSKEGFS 99
KA ++ + T+ G+ +D+V R+ + +D++ + S S GF
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFV 223
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
L L+ K G +A + ER ++S N +L L Q V R+ V
Sbjct: 224 --LDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVL- 278
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ P++V++ T+I FCK + A + + ME+ G+ PDLI ++TL+DG + G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
G KL+ Q K + D+ +++ + A + M + + P++ + +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
KG +G + EA +G+I K +P T+++L+ C+ G+L++ + +++
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 340 VGAPLLQLVVDKLVSESMLSEA 361
+ ++VD L + ++ A
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHA 480
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 128/288 (44%), Gaps = 15/288 (5%)
Query: 90 YSDFSKEGFSARLITLYG-------KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
Y D K G+ ++ +YG K G+ A + +M ++ V+ FN+L+ +
Sbjct: 449 YEDMIKMGYPPDVV-IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIK------AFCKSKVFESAVSMLEEMEKN 196
++ ++F+ + G +KPD+ ++ TV++ AFCK + + + M++N
Sbjct: 508 RLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN 566
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
+S D+ N ++ L+ R E+ K + + + PDI +YN + G ++ EA
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
+ ++ P+ +L +I ++D A + F + + + P+ T+ L+ +
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686
Query: 317 LCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ D++ + + +E+ +++D L + EA I
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 26/302 (8%)
Query: 27 SIKSLSQDL-YKEVNLRKLVD------KFKKACDVDRFRTKTGIYED-----TVRRL--- 71
S+K L Q + V L+D +F +A V R GI D TV R+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 72 --AGAKQFRGVI-----DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
A K + I D+++ K +D + +I L K + A + F+ + E
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIA---VCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFE 184
++++N ++ Y ++ ERIF E+ P+ V+ +I CK+ +
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 185 SAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
A+ M M + G P+ +T+ L+D E KL+ +M K +SP I SY+ +
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
GL + EA + + PD+ + +I+G+ G L EA + + ++
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 305 PD 306
PD
Sbjct: 780 PD 781
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P Q+FD M + + N ++ + + F + E ++PD+V+YN
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYN 611
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
T+I +C + + A + E ++ P+ +T L+ L + +++ M K
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
P+ +Y + + + + +EM++K + P + S + II G G +DEA
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 292 KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
F + ++ PD +A L+ C+ G L A
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
V++F L+ + + +FK V + ++PDL++Y+T+I + K+ + +
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+ GV D++ F++ +D G ++ +M + +SP++ +Y + GL
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+ + EA ++ K+ ++P + + +++I GF GNL + ++ K PD
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
+ LV L ++G + A+ ++ R+ + ++D + EA ++ L
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 106/258 (41%), Gaps = 42/258 (16%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I +Y KSG A ++ M + + V+++ L+ + ++ ++
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-G 421
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG------ 216
++P +V+Y+++I FCK S ++ E+M K G PD++ + L+DGL +G
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 217 -----------------------------RFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
RF+E K++ MG + PD+ ++ +
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 248 AVEK------KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+E K ++ M++ + D+ N +I +++A K+F + +
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 302 ENDPDKNTFATLVPFLCE 319
+ +PD T+ T++ C
Sbjct: 602 KMEPDIVTYNTMICGYCS 619
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 35/263 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY--LHS--KQYR--------- 148
LI + K G RA+ + DE+ E N +++ LL++Y LH+ + YR
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELN----LITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 149 -------VVERIFKE---VPG--------EISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
++ R+ K + G E+SV P+ V+Y T++ + K+ ++ A+++
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
+M G+ DL+ + L+DGL+ G E EK + + N P++ +Y A + GL
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
A + +M +K V P++ + +++I G+V +G L+EA ++E P+ T+
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437
Query: 311 ATLVPFLCEKGDLKTAIDVVKEI 333
T++ L + G + AI++ KE+
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEM 460
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 144 SKQYRVVERIFK--EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
S +++ + IFK E +K YNT+I CK + + A ++ +ME G PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
+TFN+L+ G + + + M +SP++ +YN + GL+ E ++L
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
EM+ + ++PD F+ NA+I G GN+ + + E+ P +T+ L+ G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 322 DLKTAIDVVKEI 333
+ A +++KE+
Sbjct: 833 KMLQARELLKEM 844
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K GM K+A + +M R ++FN+L+ Y R + V E
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY-SVMMEA 742
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P++ +YNT+I+ + + + L EM+ G+ PD T+N L+ G G +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M L P +YN + A K +A E L+EM K+ V P+ + +I G
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 282 F 282
Sbjct: 863 L 863
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD V++N+++ + A+S M + G+SP++ T+NT++ GL G +E +K
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M + + PD +YNA + G A ++ EM + P + N +I F N
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
G + +A++ E+ K P+ +T+ T++ LC+
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE--------------------------- 192
++ + PD VSYNT+I FCK F A ++++E
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR 248
Query: 193 -MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
M +G PD++TF+++++ L G+ EG L +M ++ P+ +Y + L
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
A+ +M + + DL ++ G G+L EA+K F + + P+ T+
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
LV LC+ GDL +A ++ ++ +++ V + ML EA ++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 64 YEDTVRRLA-GAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEM 122
+ + RL G K G + +L ++ S + L+ K+ + + A ++ +M
Sbjct: 262 FSSIINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 123 PERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKV 182
R ++ + L+ + R E+ FK + + V P++V+Y ++ CK+
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV-PNVVTYTALVDGLCKAGD 379
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
SA ++ +M + V P+++T++++++G +G EE L +M +N+ P+ +Y
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ GL K A+E +EM V+ + + L+A++ G + E K ++
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 303 NDPDKNTFATLVPFLCEKGD 322
D+ + +L+ + GD
Sbjct: 500 VTLDQINYTSLIDVFFKGGD 519
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 91/224 (40%), Gaps = 34/224 (15%)
Query: 128 TRTVLS-FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
TR +S F+ L YL ++ R + V PD +N++I F + +
Sbjct: 54 TRVYVSLFHTLFRLYLSCERLYGAARTLSAMC-TFGVVPDSRLWNSLIHQFNVNGLVHDQ 112
Query: 187 VSML-EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
VS++ +M GVSPD+ N L+ GR L + + +S D +YN +
Sbjct: 113 VSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVIS 169
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK----- 300
GL EA +FL EM K + PD S N +I GF GN AK EI +
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT 229
Query: 301 -----------------------SENDPDKNTFATLVPFLCEKG 321
S DPD TF++++ LC+ G
Sbjct: 230 HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGG 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 124/300 (41%), Gaps = 41/300 (13%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+GK G A + M E+ + +FN ++ + + +++ ++ +KP
Sbjct: 552 FGKVG----ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK-SCGIKP 606
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF-------------------- 205
L+S N V+ C++ E A+ +L +M + P+L T+
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666
Query: 206 ---------------NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
NTL+ L G ++ + G M + PD ++N+ + G V
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+A+ M + + P++ + N II+G + G + E KW E++ PD T+
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 786
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV-ELGK 369
L+ + G++K ++ + E+ +++ + + + +A+E++ E+GK
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 166 DLVSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
D+VSYN +I K KV A + M + G+ PD+ TFN +++ +G E KL
Sbjct: 538 DVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
W +M + P + S N + L K EA+ L +M ++ P+L + +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
D K + + + TL+ LC+ G K A V+ ++
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
+ +R F I + + ++T+ + + + A L M GV PD +N+L
Sbjct: 40 ITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSL 99
Query: 209 LDGLYAEGRFEEGEKL-WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
+ G + L + +M +SPD+ + N + + A+ L+ +
Sbjct: 100 IHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RV 156
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
+ D + N +I G G DEA ++ E+ K PD ++ TL+ C+ G+ A
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216
Query: 328 DVVKEI 333
+V EI
Sbjct: 217 ALVDEI 222
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 15/322 (4%)
Query: 50 KACDVDRFRTKTGIY--EDTVRRLAGAKQFRGVIDILEHQ--------KQYSDFSKEGFS 99
KA ++ + T+ G+ +D+V R+ + +D++ + S S GF
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFV 223
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
L L+ K G +A + ER ++S N +L L Q V R+ V
Sbjct: 224 --LDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVL- 278
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ P++V++ T+I FCK + A + + ME+ G+ PDLI ++TL+DG + G
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
G KL+ Q K + D+ +++ + A + M + + P++ + +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
KG +G + EA +G+I K +P T+++L+ C+ G+L++ + +++
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 340 VGAPLLQLVVDKLVSESMLSEA 361
+ ++VD L + ++ A
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHA 480
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
I +Y KSG A ++ M + + V+++ L+ + ++ ++
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-G 421
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++P +V+Y+++I FCK S ++ E+M K G PD++ + L+DGL +G
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ +M G+++ ++ +N+ + G + EA++ + M +KPD+ + +++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
+ EG L+EA F + K +PD + TL+ C+
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 9/245 (3%)
Query: 90 YSDFSKEGFSARLITLYG-------KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
Y D K G+ ++ +YG K G+ A + +M ++ V+ FN+L+ +
Sbjct: 449 YEDMIKMGYPPDVV-IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
++ ++F+ + G +KPD+ ++ TV++ E A+ + M K G+ PD
Sbjct: 508 RLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
+ + TL+D + G +L+ M +S DI N + L + +A +F
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ + ++PD+ + N +I G+ + LDEA++ F ++ + P+ T L+ LC+ D
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 323 LKTAI 327
+ AI
Sbjct: 687 MDGAI 691
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 4/227 (1%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
+ D+++ K +D + +I L K + A + F+ + E ++++N ++
Sbjct: 588 LFDLMQRNKISADIA---VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
Y ++ ERIF E+ P+ V+ +I CK+ + A+ M M + G
Sbjct: 645 GYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
P+ +T+ L+D E KL+ +M K +SP I SY+ + GL + EA
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ + PD+ + +I+G+ G L EA + + ++ PD
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K P Q+FD M + + N ++ + + F + E
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EG 630
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD+V+YNT+I +C + + A + E ++ P+ +T L+ L +
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ M K P+ +Y + + + + +EM++K + P + S + II G
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G +DEA F + ++ PD +A L+ C+ G L A
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R+FK + ++PD ++Y T+I AFCK + + + M++N +S D+ N ++
Sbjct: 556 RMFK-----MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L+ R E+ K + + + PDI +YN + G ++ EA + ++ P+
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+L +I ++D A + F + + + P+ T+ L+ + + D++ + + +
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 332 EIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
E+ +++D L + EA I
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V++F L+ + + +FK V + ++PDL++Y+T+I + K+ + +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
+ GV D++ F++ +D G ++ +M + +SP++ +Y + GL +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ EA ++ K+ ++P + + +++I GF GNL + ++ K PD +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
LV L ++G + A+ ++ R+ + ++D + EA ++ L
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + KSG P +A Q+ + + ++++A S + E +F+E+ +
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL-RQS 333
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP +YN ++K + K+ + A SM+ EMEK GVSPD T++ L+D GR+E
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +M ++ P+ ++ L G + + + L+EM+ VKPD N +I
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
F LD A F + +PD+ T+ TL+ C+ G
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K G A +MF+ M R C ++N ++ +Y +++ ++R+ ++ +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ- 543
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P++V++ T++ + KS F A+ LEEM+ G+ P +N L++ G E+
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ M L P + + N+ + +++ EA LQ M++ VKPD+ + ++K
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+ + + E+ S PD+ + L
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y +G + AR + EM + F+ LLA + +++ ++ KE+ I
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-I 438
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
VKPD YN VI F K + A++ + M G+ PD +T+NTL+D GR
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+++ M + P +YN + +++ + L +M+ + + P++ + ++
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G ++A + E++ P + L+ ++G + A++ + + + +
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
L +++ + +EA +++ K N P
Sbjct: 619 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R++KE+ + ++ D+ N +I F KS A+ +L + G+S T +++
Sbjct: 255 RLYKEIERD-KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L GR E E L+ ++ + P R+YNA L G +A + EMEK+ V PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ + +I +VN G + A+ E+E + P+ F+ L+ ++G+ + V+K
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 332 EIFNTRCRVGAPLLQLVVD 350
E+ + + +V+D
Sbjct: 434 EMKSIGVKPDRQFYNVVID 452
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 4/274 (1%)
Query: 69 RRLAGAK---QFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPER 125
R LAG + +++ +L+ K F +I +GK A FD M
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFES 185
+++N L+ + ++ V E +F+ + P +YN +I ++ + ++
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDD 532
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
+L +M+ G+ P+++T TL+D GRF + + +M L P YNA +
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
A + +AV + M +KP L +LN++I F + EA ++++ P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
D T+ TL+ L + V +E+ + C+
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 42/278 (15%)
Query: 97 GFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVV 150
G SA+ TL SG A +F+E+ + ++NALL Y+ + +
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 151 ERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
E + E+ V PD +Y+ +I A+ + +ESA +L+EME V P+ F+ LL
Sbjct: 359 ESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA-------------------RLLGLAVEK 251
G G +++ ++ +M + PD + YN R+L +E
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 252 -------------KTGEAV---EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
K G + E + ME++ P + N +I + ++ D+ K+
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 296 GEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G+++ P+ T TLV + G AI+ ++E+
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 66 DTVRRLAGAKQFRGVI-DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
D ++RL G + +G++ +++ H L+ +YGKSG A + +EM
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTH-------------TTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFE 184
+ +NAL+ AY F+ + + +KP L++ N++I AF + +
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDA 636
Query: 185 SAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
A ++L+ M++NGV PD++T+ TL+ L +F++ ++ +M PD
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 62 GIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSA--RLITLYGKSGMPKRARQMF 119
G+ +D R + + D+ Q+ + D + A ++ Y K+G+ AR++F
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV----PGEISVKPDLVSYNTVIK 175
DEMPERN V+S++ L+ Y+ +Y+ +F+E+ P E V+P+ + +TV+
Sbjct: 152 DEMPERN----VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 176 AFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
A + E + ++K V D++ L+D G E ++++ +G K
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK--- 264
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-VKPDLFSLNAIIKGFVNEGNLDEAKKW 294
D+++Y+A + LA+ T E + EM D + P+ + I+ V+ G ++E K +
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 295 FG-EIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
F IE+ P + +V G +K A
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + K+ + + +R++ M R RT +F+ ++ +Y + Q R ++ +
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLT-LMQRA 271
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+P+L+ NT I F ++ E A+ LE M+ G+ P+++T+N ++ G R EE
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD-VKPDLFSLNAIIK 280
+L M K PD SY + L EK+ E + +++M K+ + PD + N +I
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT-RCR 339
+ DEA + + ++ DK ++ +V LC++G + A D++ E+ + C
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
VV+ + +AK+++++ T+ + P
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%)
Query: 132 LSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
L ++A++ A + + + E+ + PD+V+Y V+ FC+ + A +L+
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
M +G P+ +++ LL+G+ G+ E ++ SP+ +Y+ + GL E
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
K EA + ++EM K P +N +++ +G EA+K+ E + F
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
T++ C+ +L A+ V+ +++ +VD L + ++EA E+++
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 93 FSKEGFSARLITLYGKSGMPKRARQMFDEMPER-NCTRTVLSFNALLAAYLHSKQYRVVE 151
K G+SA ++ K G A+ + +EM + +C V+++ A++ + + +
Sbjct: 416 IDKLGYSA-IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
++ +V KP+ VSY ++ C++ A M+ E++ SP+ IT++ ++ G
Sbjct: 475 KLL-QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 533
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L EG+ E + +M K P N L L + +T EA +F++E K +
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ + +I GF LD A ++ D T+ TLV L +KG + A +++K
Sbjct: 594 VVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Query: 332 EIFN 335
++ +
Sbjct: 654 KMLH 657
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
++V++ TVI FC++ ++A+S+L++M D+ T+ TL+D L +GR E +L
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M K + P +Y + K + V L++M + ++ N +I+
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY--NQVIEKLCVL 710
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLL 345
G L+EA G++ ++ + D T L+ +KG +A V +FN +
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMC 770
Query: 346 QLVVDKLVSESMLSEAKEIV 365
+ + +LV + + EA +++
Sbjct: 771 EKLSKRLVLKGKVDEADKLM 790
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 67 TVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERN 126
++ + +++ G D+ E + ++ + G RLI L S PK QM RN
Sbjct: 118 VLKSIPQSREEAGRFDVEEDESRHPLVREVG---RLIGLRS-SWNPKHEGQM------RN 167
Query: 127 CTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
R+ L + + A RV + F + + D + Y ++++ K+K+ + +
Sbjct: 168 LLRS-LKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGS 226
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+L M++ G+ F+ ++ G+ + K+ M + P++ N +
Sbjct: 227 RRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDV 286
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ +A+ FL+ M+ + P++ + N +I+G+ + ++EA + ++ PD
Sbjct: 287 FVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPD 346
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEI 333
K ++ T++ +LC++ + D++K++
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKM 373
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 90 YSDFSKEGFSARLITLYG------KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
Y + G S +IT K+ +A +M DEM + + ++ AL+ +
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+F E+ E + P YN++I F +A+ + ++M K+G+ DL
Sbjct: 667 RSNMESASALFSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
T+ TL+DGL +G +L+ +M L PD Y + GL+ + + + V+ +EM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+K +V P++ NA+I G EGNLDEA + E+ PD TF LV
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 41/301 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ K G A ++ +M R V+S+N ++ + K + +F + E
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL-EK 507
Query: 162 SVKPDL-----------------------------------VSYNTVIKAFCKSKVFESA 186
+KP+ V Y T+I CK A
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 187 VSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
+L M E+ + +++N+++DG + EG + + +M G +SP++ +Y + +
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
GL + +A+E EM+ K VK D+ + A+I GF N++ A F E+ + +P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIF--NTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
+ + +L+ G++ A+D+ K++ RC +G ++D L+ + L A E
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT--YTTLIDGLLKDGNLILASE 745
Query: 364 I 364
+
Sbjct: 746 L 746
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 108 KSGMPKRARQMFDEMPE--RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
K G +AR++ M E R C + +S+N+++ + + ++E+ G + P
Sbjct: 560 KVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISP 617
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
++++Y +++ CK+ + A+ M +EM+ GV D+ + L+DG E L+
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
++ + L+P YN+ + G A++ ++M K ++ DL + +I G + +
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
GNL A + + E++ PD+ + +V L +KG + + +E+
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 133/272 (48%), Gaps = 3/272 (1%)
Query: 94 SKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI 153
S+E +++ +I K G A ++ DEM + V++ +L+ + + +
Sbjct: 303 SQETYTS-VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
F ++ E P+ V+++ +I+ F K+ E A+ ++ME G++P + +T++ G
Sbjct: 362 FDKMEKE-GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+ EE KL+ + L+ ++ N L L + KT EA E L +ME + + P++
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
S N ++ G + N+D A+ F I + P+ T++ L+ D + A++VV +
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
++ V + Q +++ L S+A+E++
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 3/191 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K + A +F E+ E + +N+L++ + + ++K++ +
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD- 718
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ DL +Y T+I K A + EM+ G+ PD I + +++GL +G+F +
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K++ +M N++P++ YNA + G E EA EM K + PD + + ++ G
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Query: 282 FVNEGNLDEAK 292
V GNL +
Sbjct: 839 QV--GNLQPVR 847
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
+ LIT + K+ A +FD+M + + ++F+ L+ + + + +K++
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
+ + P + +T+I+ + K + E A+ + +E + G++ ++ NT+L L +G+
Sbjct: 402 -VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKT 459
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+E +L +M + + P++ SYN +LG +K A + +K +KP+ ++ + +
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
I G + A + + S + + + T++ LC+ G A +++ +
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P A ++ ER L ++ + A + + + +E+ + P +Y
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+VI A K + A+ + +EM +G+S +++ +L+ G L+ +M +
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
SP+ +++ + + +A+EF ++ME + P +F ++ II+G++ +EA
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 292 KKWFGEIEKSENDPDKNTFA--TLVPFLCEKGDLKTAIDVVKEI 333
K F E S N F T++ +LC++G A +++ ++
Sbjct: 429 LKLFDE---SFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 88 KQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
+ Y + S+ G S ++T + KS A +M EM + ++ AL+ +
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
+ +F E+P E+ + P++ YN++I F ++A+ + ++M +G+S D
Sbjct: 671 CKKNDMKTAYTLFSELP-ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
L T+ T++DGL +G L+ ++ + PD + + GL+ + + +A + L+
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
EM+KKDV P++ + +I G EGNL+EA + E+ + D F LV EK
Sbjct: 790 EMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++P++V YN ++ A C+ K + A S+ EM + G+ P+ T++ L+DG + +
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK-KDVKPDLFSLNAIIKG 281
+ QM N + YN + GL +T +A E LQ + K K S N+II G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
FV G+ D A + + E+ ++ P+ TF +L+ C+ + A+++ E+ + ++
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 342 APLLQLVVDKLVSESMLSEA----KEIVELG 368
P ++D ++ + A E+ ELG
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 3/250 (1%)
Query: 86 HQKQYSDF-SKEGFSARLITLYGKSGMPKRARQMFDEM-PERNCTRTVLSFNALLAAYLH 143
+Q S+F + E +I K G +A++M + E+ + + S+N+++ ++
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
++E+ E P++V++ ++I FCKS + A+ M EM+ + DL
Sbjct: 603 VGDTDSAVETYREM-SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
+ L+DG + + L+ ++ L P++ YN+ + G K A++ ++M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
+ DLF+ +I G + +GN++ A + E+ PD+ LV L +KG
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 324 KTAIDVVKEI 333
A +++E+
Sbjct: 782 LKASKMLEEM 791
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI + K+ + A + ++M N + +N ++ Q + + + + E
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SYN++I F K +SAV EM +NG SP+++TF +L++G R +
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M L D+ +Y A + G + A E+ + + P++ N++I G
Sbjct: 645 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F N G +D A + ++ D T+ T++ L + G++ A D+ E+ +
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD 764
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
L ++V+ L + +A +++E
Sbjct: 765 EILHMVLVNGLSKKGQFLKASKMLE 789
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 106/230 (46%), Gaps = 8/230 (3%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+S + A++++++M ++ L+ A L ++ +IF+ V +PD
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSR-GAEPDG 274
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEME-KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
+ ++ ++A CK+ A+ +L EM K GV T+ +++ EG EE ++
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+M G + + + + + G + G+A++ ME++ + PD + +++ F
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT-AIDVVKEIFN 335
+++A +++ ++ P T++ +G LK + + EIFN
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMI-----QGCLKAESPEAALEIFN 439
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 84/186 (45%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P+ A ++F + R L F+ + A + + + +E+ G++ V +Y
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+VI AF K E AV +++EM G+ +I +L++G + L+ +M +
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
L+PD ++ + + +A+EF M+ + P ++ +I+G + + + A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 292 KKWFGE 297
+ F +
Sbjct: 435 LEIFND 440
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 47/258 (18%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
+FN LL AY+ +K+ F + V P + N V+ + +S + + A + +
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDR-KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK- 251
M GV+ D +T L+ E + EE K++ ++ + PD L LAV+
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPD-----GLLFSLAVQAA 284
Query: 252 -KTGE---AVEFLQEMEKK-DVKPDLFSLNAIIKGFVNEGNLDEAKK------------- 293
KT + A++ L+EM K V + ++I FV EGN++EA +
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 294 ----------------------WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
F +E+ PDK F+ +V + C+ +++ AI+
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 332 EIFNTRCRVGAPLLQLVV 349
+ + R + L+ ++
Sbjct: 405 RMKSVRIAPSSVLVHTMI 422
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
++G A+ + E+ E++ ++N LL K VV E+ + VKPDL
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 168 VS-----------------------------------YNTVIKAFCKSKVFESAVSMLEE 192
VS YNT++K FC AV + ++
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M++ GV PD IT+NTL+ GL GR EE M PD +Y + + G+ + +
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+ A+ L+EME + P+ + N ++ G +D+ + + ++ S + N +AT
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 313 LVPFLCEKGDLKTAIDV 329
LV L + G + A +V
Sbjct: 411 LVRSLVKSGKVAEAYEV 427
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEK 223
PD +YN ++K CK K ++EM + V PDL++F L+D + E
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L ++G PD YN + G K EAV ++M+++ V+PD + N +I G
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
G ++EA+ + + + +PD T+ +L+ +C KG+ A+ +++E+ C
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 371
Query: 344 LLQLVVDKLVSESMLSEAKEIVELGKTN 371
++ L ++ + E+ E+ K++
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSS 399
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 115 ARQMFDEMPERNCTRTVLSF-NALLAAY----LHSKQYRVVERIFKEVPGEISVKPDLVS 169
A+ +F+ + + L F N++L +Y + + ++ + I K P + +P +
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQP---NFRPGRST 124
Query: 170 YNTVIKAFCKSKVFESAVS----MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
+ ++ C++ +S++S +L M NG+ PD +T + + L GR +E + L
Sbjct: 125 FLILLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK-DVKPDLFSLNAIIKGFVN 284
++ K+ PD +YN L L K EF+ EM DVKPDL S +I N
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
NL EA ++ + PD + T++ C A+ V K++
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E V+PD ++YNT+I K+ E A L+ M G PD T+ +L++G+ +G
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
L +M + +P+ +YN L GL + + +E + M+ VK + ++
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+ V G + EA + F S++ D + ++TL
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 91 SDFSKEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
S FS G S R I+ K+ A + ++ + FNALL+ +
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 KQY-RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM------EKNG 197
R+ + + K E+ ++PD+V+ +I CKS+ + A+ + E+M + N
Sbjct: 308 MDISRMNDLVLKM--DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEA 256
+ D I FNTL+DGL GR +E E+L +M + +P+ +YN + G K A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
E + M++ ++KP++ ++N I+ G L+ A +F ++EK + T+ TL+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 317 LCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
C +++ A+ +++ C A + ++ L +A +VE
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMP-ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
LI K G K A ++ M E C +++N L+ Y + + + + + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK-E 434
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+KP++V+ NT++ C+ AV +MEK GV +++T+ TL+ + E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M SPD + Y A + GL ++ +A+ ++++++ DL + N +I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
F ++ N ++ + ++EK PD T+ TL+ F + D ++ +++++
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIV-ELGKTNRYHP 375
V+D S L EA ++ ++G ++ +P
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 22/291 (7%)
Query: 90 YSDFSKEGFSARLIT----LYGKSGMP--KRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+ D KEG ++T ++ + ++A +++M E C+ + AL++
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 144 SKQ----YRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
++ RVVE++ KE G S+ DL++YN +I FC E ML +MEK G
Sbjct: 524 VRRDHDAIRVVEKL-KE--GGFSL--DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
PD IT+NTL+ FE E++ QM L P + +Y A + + EA++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 260 LQEME-KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
++M V P+ N +I F GN +A E++ P+ T+ L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 319 EKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGK 369
EK +T + ++ E+ C +++++++ LS + E+V+L K
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMER------LSGSDELVKLRK 743
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR-LITLYGKSGMPKRARQMFDE 121
IY + L ++ I ++E K+ FS + + LI L+ ++ +M +
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKE-GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M + +++N L++ + K + VER+ +++ E + P + +Y VI A+C
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 630
Query: 182 VFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ A+ + ++M + V+P+ + +N L++ G F + L +M K + P++ +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 241 NARLLGLAVEKKTGEA-VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
NA L EK GE ++ + EM ++ +P+ ++ +++ L + +K+
Sbjct: 691 NA-LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPE--RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
LI +G+ GM ++ +++ + +N + + LL L ++V++ + ++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK--- 214
Query: 160 EISVKPDLVSYNTVIKAFCKSKVF--ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E P+ ++ + V+ K ++ E ++++ +GVSP+ + + L R
Sbjct: 215 ESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 218 FEEGEKLWGQMGGKNLSP-DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ + KN +P + +NA L L + + +M++ ++PD+ +L
Sbjct: 275 ANAAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSEND------PDKNTFATLVPFLCEKGDLKTAID-V 329
+I +DEA + F ++ D D F TL+ LC+ G LK A + +
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 330 VKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V+ RC A ++D L AKE+V K + P
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 16/290 (5%)
Query: 91 SDFSKEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
S FS G S R I+ K+ A + ++ + FNALL+ +
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 KQY-RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM------EKNG 197
R+ + + K E+ ++PD+V+ +I CKS+ + A+ + E+M + N
Sbjct: 308 MDISRMNDLVLKM--DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEA 256
+ D I FNTL+DGL GR +E E+L +M + P+ +YN + G K A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
E + M++ ++KP++ ++N I+ G L+ A +F ++EK + T+ TL+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 317 LCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
C +++ A+ +++ C A + ++ L +A +VE
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMP-ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
LI K G K A ++ M E C +++N L+ Y + + + + + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK-E 434
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+KP++V+ NT++ C+ AV +MEK GV +++T+ TL+ + E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M SPD + Y A + GL ++ +A+ ++++++ DL + N +I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
F ++ N ++ + ++EK PD T+ TL+ F + D ++ +++++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIV-ELGKTNRYHP 375
V+D S L EA ++ ++G ++ +P
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 16/255 (6%)
Query: 90 YSDFSKEGFSARLIT----LYGKSGMP--KRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+ D KEG ++T ++ + ++A +++M E C+ + AL++
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 144 SKQ----YRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
++ RVVE++ KE G S+ DL++YN +I FC E ML +MEK G
Sbjct: 524 VRRDHDAIRVVEKL-KE--GGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
PD IT+NTL+ FE E++ QM L P + +Y A + + EA++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 260 LQEME-KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
++M V P+ N +I F GN +A E++ P+ T+ L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 319 EKGDLKTAIDVVKEI 333
EK +T + ++ E+
Sbjct: 699 EKTQGETLLKLMDEM 713
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR-LITLYGKSGMPKRARQMFDE 121
IY + L ++ I ++E K+ FS + + LI L+ ++ +M +
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKE-GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M + +++N L++ + K + VER+ +++ E + P + +Y VI A+C
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 630
Query: 182 VFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ A+ + ++M + V+P+ + +N L++ G F + L +M K + P++ +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 241 NARLLGLAVEKKTGEA-VEFLQEM 263
NA L EK GE ++ + EM
Sbjct: 691 NA-LFKCLNEKTQGETLLKLMDEM 713
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPE--RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
LI +G+ GM ++ +++ + +N + + LL L ++V++ + ++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK--- 214
Query: 160 EISVKPDLVSYNTVIKAFCKSKVF--ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E P+ ++ + V+ K ++ E ++++ +GVSP+ + + L R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 218 FEEGEKLWGQMGGKNLSP-DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ + KN +P + +NA L L + + +M++ ++PD+ +L
Sbjct: 275 ANTAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSEND------PDKNTFATLVPFLCEKGDLKTAID-V 329
+I +DEA + F ++ D D F TL+ LC+ G LK A + +
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 330 VKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V+ RC A ++D L AKE+V K + P
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 22/195 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y K G + AR++FD + R + V+++ A+++ YL SKQ + E +F+E+P
Sbjct: 83 VITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMP--- 136
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ ++VS+NT+I + +S + A+ + +EM E+N ++++N+++ L GR +E
Sbjct: 137 --ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN-----IVSWNSMVKALVQRGRIDE 189
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
L+ +M + D+ S+ A + GLA K EA M ++++ S NA+I
Sbjct: 190 AMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMIT 241
Query: 281 GFVNEGNLDEAKKWF 295
G+ +DEA + F
Sbjct: 242 GYAQNNRIDEADQLF 256
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 110/224 (49%), Gaps = 15/224 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y ++ A Q+F MPER+ S+N ++ ++ +++ +F +P
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMP--- 291
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEE 220
+ +++S+ T+I + ++K E A+++ +M ++G V P++ T+ ++L E
Sbjct: 292 --EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV-KPDLFSLNAII 279
G+++ Q+ K++ + LL + K+GE + + + V + DL S N++I
Sbjct: 350 GQQI-HQLISKSVHQKNEIVTSALLNMY--SKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
+ + G+ EA + + ++ K P T+ L+ F C L
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL-FACSHAGL 449
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT + ++ +A +FD MPE+N V+S+ ++ Y+ +K+ +F ++ +
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKN----VISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SVKP++ +Y +++ A + + + K+ + I + LL+ G
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K++ G D+ S+N+ + A EA+E +M K KP + ++
Sbjct: 386 RKMFDN--GLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK-GDLKTAIDVVKEIFNTRCRV 340
+ G +++ ++F ++ + E+ P + T + LC + G LK DV I R+
Sbjct: 444 CSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK---DVTNFINCDDARL 500
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVE 366
++ + +S AKE+V+
Sbjct: 501 SRSFYGAILSACNVHNEVSIAKEVVK 526
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 132/308 (42%), Gaps = 19/308 (6%)
Query: 56 RFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKS 109
R + T +Y + A G I+ E K Y SK G L+T Y +
Sbjct: 215 RVKLSTVVYNALISGFCKA----GRIEKAEALKSY--MSKIGCEPDLVTYNVLLNYYYDN 268
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH-SKQYRVVERIFKEVPGEISVKPDLV 168
M KRA + EM S+N LL + S + + KE+ E D+V
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM--EPRGFCDVV 326
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
SY+T+I+ FC++ A + EEM + G+ +++T+ +L+ EG +KL QM
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
LSPD Y L L +A +M + ++ PD S N++I G G +
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLV 348
EA K F +++ E PD+ TF ++ L L A V ++ + G L + V
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK----GFTLDRDV 502
Query: 349 VDKLVSES 356
D L+ S
Sbjct: 503 SDTLIKAS 510
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 59/301 (19%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF--NALLAAYLHSKQYRVVERIF 154
+ +R+ L KSGM A Q+FDEM R+ + V SF N + + ++ + E I+
Sbjct: 11 AYRSRIANLV-KSGMIDNAVQVFDEM--RHSSYRVFSFDYNRFIGVLVRESRFELAEAIY 67
Query: 155 KEV-PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD--- 210
++ P S+ P +Y+ I CK K F+ ++L +ME G PD+ FN LD
Sbjct: 68 WDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 211 --------------------------------GLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
GL+ G+ + ++W M +SPD +
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 239 SYNARLLGLAVEKKTGEAVEFL-QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
+ A ++GL +K A E + +E++ VK NA+I GF G +++A+
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT---------------RCRVGA 342
+ K +PD T+ L+ + + LK A V+ E+ + CRV
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 343 P 343
P
Sbjct: 306 P 306
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
M EM R V+S++ L+ + + R R+F+E+ + V ++V+Y ++IKAF
Sbjct: 313 MVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM-NVVTYTSLIKAF 370
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
+ A +L++M + G+SPD I + T+LD L G ++ ++ M ++PD
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
SYN+ + GL + EA++ ++M+ K+ PD + II G + L A K + +
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 298 IEKSENDPDKNTFATLVPFLCE 319
+ D++ TL+ C
Sbjct: 491 MMDKGFTLDRDVSDTLIKASCS 512
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 124/264 (46%), Gaps = 3/264 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI+ + K+G ++A + M + C ++++N LL Y + + E + E+
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS- 284
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVS-MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
++ D SYN ++K C+ + + M++EME G D+++++TL++ +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRK 343
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+L+ +M K + ++ +Y + + E + A + L +M + + PD I+
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
GN+D+A F ++ + E PD ++ +L+ LC G + AI + +++ C
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 341 GAPLLQLVVDKLVSESMLSEAKEI 364
+ ++ L+ LS A ++
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKV 487
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 35/300 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI ++G A ++++ M + + AL+ H+++ + + E
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
VK V YN +I FCK+ E A ++ M K G PDL+T+N LL+ Y +
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 222 EKLWGQMGGKNLSPDIRSYNARL------------------------------LGLAVE- 250
E + +M + D SYN L +E
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIET 334
Query: 251 ----KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
T +A +EM +K + ++ + ++IK F+ EGN AKK ++ + PD
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ + T++ LC+ G++ A V ++ A ++ L ++EA ++ E
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 35/200 (17%)
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++Y + I KS + ++AV + +EM + +N + L E RFE E ++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 228 MGGKNLS-----------------------------------PDIRSYNARLLGLAVEKK 252
M S PDI ++N L L E K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
G AV+ M ++ +PD+ S +I G G + +A + + + +S PD A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 313 LVPFLCEKGDLKTAIDVVKE 332
LV LC + A ++V E
Sbjct: 190 LVVGLCHARKVDLAYEMVAE 209
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 16/290 (5%)
Query: 91 SDFSKEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
S FS G S R I+ K+ A + ++ + FNALL+ +
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 KQY-RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM------EKNG 197
R+ + + K E+ ++PD+V+ +I CKS+ + A+ + E+M + N
Sbjct: 308 MDISRMNDLVLKM--DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEA 256
+ D I FNTL+DGL GR +E E+L +M + P+ +YN + G K A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
E + M++ ++KP++ ++N I+ G L+ A +F ++EK + T+ TL+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 317 LCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
C +++ A+ +++ C A + ++ L +A +VE
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMP-ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
LI K G K A ++ M E C +++N L+ Y + + + + + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK-E 434
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+KP++V+ NT++ C+ AV +MEK GV +++T+ TL+ + E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M SPD + Y A + GL ++ +A+ ++++++ DL + N +I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
F ++ N ++ + ++EK PD T+ TL+ F + D ++ +++++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIV-ELGKTNRYHP 375
V+D S L EA ++ ++G ++ +P
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 22/291 (7%)
Query: 90 YSDFSKEGFSARLIT----LYGKSGMP--KRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+ D KEG ++T ++ + ++A +++M E C+ + AL++
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 144 SKQ----YRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
++ RVVE++ KE G S+ DL++YN +I FC E ML +MEK G
Sbjct: 524 VRRDHDAIRVVEKL-KE--GGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
PD IT+NTL+ FE E++ QM L P + +Y A + + EA++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 260 LQEME-KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
++M V P+ N +I F GN +A E++ P+ T+ L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 319 EKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGK 369
EK +T + ++ E+ C +++++++ LS + E+V+L K
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMER------LSGSDELVKLRK 743
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR-LITLYGKSGMPKRARQMFDE 121
IY + L ++ I ++E K+ FS + + LI L+ ++ +M +
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKE-GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
M + +++N L++ + K + VER+ +++ E + P + +Y VI A+C
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 630
Query: 182 VFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ A+ + ++M + V+P+ + +N L++ G F + L +M K + P++ +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 241 NARLLGLAVEKKTGEA-VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
NA L EK GE ++ + EM ++ +P+ ++ +++ L + +K+
Sbjct: 691 NA-LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPE--RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
LI +G+ GM ++ +++ + +N + + LL L ++V++ + ++
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK--- 214
Query: 160 EISVKPDLVSYNTVIKAFCKSKVF--ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E P+ ++ + V+ K ++ E ++++ +GVSP+ + + L R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 218 FEEGEKLWGQMGGKNLSP-DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ + KN +P + +NA L L + + +M++ ++PD+ +L
Sbjct: 275 ANTAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSEND------PDKNTFATLVPFLCEKGDLKTAID-V 329
+I +DEA + F ++ D D F TL+ LC+ G LK A + +
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 330 VKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V+ RC A ++D L AKE+V K + P
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y+ + A Q+R +++++ + + LI G SG + A ++ +M
Sbjct: 49 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 108
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+ +++ N +L+AY +QY F+ + G V+PD ++N +I +C SK+
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA-KVRPDTTTFNIII--YCLSKLG 165
Query: 184 ES--AVSMLEEM--EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
+S A+ + M ++ PD++TF +++ +G E ++ M + L P+I S
Sbjct: 166 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 225
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
YNA + AV +G A+ L ++++ + PD+ S ++ + +AK+ F +
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 300 KSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
K P+ T+ L+ G L A+++ +++
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ LY G + R +F+ M ++S+NAL+ AY + ++ +
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK-QN 252
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD+VSY ++ ++ +S+ A + M K P+++T+N L+D + G E
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ QM + P++ S L + KK L + + + + + N+ I
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++N L++A + + K + D TF L+ C AI +KE+
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI YG +G A ++F +M + V+S LLAA SK+ V+ +
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 357
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG---------- 211
+ + +YN+ I ++ + E A+++ + M K V D +TF L+ G
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 212 -----------------LYA--------EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+Y+ +G+ E E ++ QM PD+ +Y + L
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+K G+A E EME ++PD + +A+++ F N+G
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKG 516
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S KPD +Y+ +I A ++ + A++++++M + ++P T+N L++ + G + E
Sbjct: 41 SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 100
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ +M + PD+ ++N L ++ +A+ + + M+ V+PD + N II
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 282 FVNEGNLDEAKKWFGEI--EKSENDPDKNTFATLVPFLCEKGDLK 324
G +A F + +++E PD TF +++ KG+++
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ YG+S P +A+++F M + V+++NAL+ AY + IF+++ +
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD- 322
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP++VS T++ A +SK + ++L + G++ + +N+ + E+
Sbjct: 323 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ M K + D ++ + G K EA+ +L+EME + ++++
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 442
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ +G + EA+ F +++ + +PD + +++
Sbjct: 443 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YN +I+ + + A + EM+K PD T++ L++ G++ L M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
++P +YN + EA+E ++M V PDL + N ++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR--CR 339
+A +F ++ ++ PD TF ++ L + G A+D+ + R CR
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V + ++YN++I C+ A+ + + +E G+ P +T+ L+D L EG F + E
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
KL M K L P+I YN+ + G +T +A+ + V PD F+++++IKG+
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
+G+++EA F E + D F L+ C KG ++ A +++E+
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 45/313 (14%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE------ 151
F + I Y K G A EM E+ R V+S++ L+ SK+ V E
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL--SKEGNVEEALGLLG 301
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
++ KE V+P+L++Y +I+ CK E A + + G+ D + TL+DG
Sbjct: 302 KMIKE-----GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA--------------- 256
+ +G + G M + + P I +YN + GL + + EA
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYS 416
Query: 257 ---------------VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+E + + + DL N ++K F+ G EA + + +
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 476
Query: 302 ENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
+ PD T+AT++ C+ G ++ A+++ E+ + A ++D L + ML A
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTA 535
Query: 362 KEI-VELGKTNRY 373
E+ +EL + Y
Sbjct: 536 TEVLIELWEKGLY 548
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 81 IDILEHQKQYSDFSKEGFSARLITL--YGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
+D++++ + KEGF + + L + KS R T +++N+L+
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKS---------------RGVTLNTITYNSLI 697
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGV 198
R+F + I + P V+Y +I CK +F A +L+ M G+
Sbjct: 698 NGLCQQGCLVEALRLFDSLE-NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
P++I +N+++DG G+ E+ ++ + ++PD + ++ + G + EA+
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN--------DPDKNTF 310
E + K++ D F +IKGF +G ++EA+ E+ SE+ D +
Sbjct: 817 VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAES 876
Query: 311 ATLVPF---LCEKGDLKTAIDVVKEIFNT 336
++ F LCE+G + AI ++ EI +T
Sbjct: 877 ESIRGFLVELCEQGRVPQAIKILDEISST 905
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 131/289 (45%), Gaps = 2/289 (0%)
Query: 78 RGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSF--N 135
+G++ + + + + F LI + + G A ++ + M +N +F +
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCS 175
Query: 136 ALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
A+++ + + + F+ + P+LV+Y T++ A C+ + ++ +E
Sbjct: 176 AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
G D + ++ + G + G + +M K ++ D+ SY+ + GL+ E E
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
A+ L +M K+ V+P+L + AII+G G L+EA F I + D+ + TL+
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 316 FLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+C KG+L A ++ ++ + V++ L +SEA E+
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 2/235 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNC-TRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
+ +I+ + K G P+ A F+ + ++++ L++A + V + + +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
E + D V Y+ I + K A+ EM + G++ D+++++ L+DGL EG
Sbjct: 235 DE-GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNV 293
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
EE L G+M + + P++ +Y A + GL K EA + ++ D F +
Sbjct: 294 EEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTL 353
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
I G +GNL+ A G++E+ P T+ T++ LC G + A +V K +
Sbjct: 354 IDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV 408
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
+ G RA M +M +R ++L++N ++ + + + + K V G D+
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG------DV 412
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++Y+T++ ++ K + ++ + + + + DL+ N LL G + E + L+
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M +L+PD +Y + G + EA+E E+ K V + N II +G
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
LD A + E+ + D +T TL+ + G K + +V
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 83 ILEHQKQYSDFSKEGFSA-----RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
I E + +++ K SA R+I K GM A ++ E+ E+ + + L
Sbjct: 498 IEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 138 LAAYLHSKQYRVVER-IFKEVPGEISVKPD--LVSYNTVIKAFCKSKVFESAVSMLEEME 194
L HS ++ I V G + D L N I CK FE+A+ + M
Sbjct: 558 L----HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMR 613
Query: 195 KNGVSPDLITF-NTLLDGLYAEGRFEEGEKLWGQMGGKNLSP-DIRSYNARLLGLAVEKK 252
+ G++ +TF +T+L L R + L G LS D+ Y + GL E
Sbjct: 614 RKGLT---VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGF 670
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+A+ + + V + + N++I G +G L EA + F +E P + T+
Sbjct: 671 LVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGI 730
Query: 313 LVPFLCEKG 321
L+ LC++G
Sbjct: 731 LIDNLCKEG 739
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDEM 122
YE+ + LA K++ + IL+ K S D S E +I YGK+G +A ++F+ +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF-IIEQYGKNGHVDQAVELFNGV 172
Query: 123 PER-NCTRTVLSFNALLAAYLHSKQ----YRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
P+ C +TV +N+LL A K Y ++ R+ ++ +KPD +Y ++ +
Sbjct: 173 PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-----GLKPDKRTYAILVNGW 227
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
C + + A L+EM + G +P + L++GL G E +++ +M PDI
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK----PDLFSLNAIIKGFVNEGNLDEAKK 293
+++N + ++ K+GE VEF EM K D+ + +I G +DEA +
Sbjct: 288 QTFNILIEAIS---KSGE-VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 294 WFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ + P + +A ++ +C G A ++
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
T T + + L + K+Y + +I K++ ++S+ + +I+ + K+ + AV
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMK-DLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 188 SMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ + K G + +N+LL L F L +M K L PD R+Y + G
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
K EA EFL EM ++ P + +I+G +N G L+ AK+ ++ K PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
TF L+ + + G+++ I E++ T C++G
Sbjct: 287 IQTFNILIEAISKSGEVEFCI----EMYYTACKLG 317
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 107/205 (52%), Gaps = 4/205 (1%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
+FN+++ ++ + +VERI++E+ E+ P++ SYN +++A+C + A + EE
Sbjct: 247 TFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEE 306
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M+ GV D++ +NT++ GL + + ++L+ MG K + +Y + G
Sbjct: 307 MKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGD 366
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN----LDEAKKWFGEIEKSENDPDKN 308
+ +EM++K + D ++ A+++G ++ + ++ A + ++ P +N
Sbjct: 367 VDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRN 426
Query: 309 TFATLVPFLCEKGDLKTAIDVVKEI 333
+ LV LCE G + A+++ E+
Sbjct: 427 CYELLVKRLCEDGKMDRALNIQAEM 451
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEG 221
+KP+ ++N+++ +F + E + EME+ G SP++ ++N L++ A G E
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
EK+W +M + + DI +YN + GL + +A E ++M K ++ + ++ G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD---LKTAIDVVKE 332
+ G++D + E+++ + D T LV LC+ D + A D+VK+
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKD 414
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEA 256
+ P+ TFN+++ Y EG E E++W +M + SP++ SYN + EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 257 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF 316
+ +EM+ + V D+ + N +I G + + +AK+ F ++ + T+ LV
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 317 LCEKGDLKTAIDVVKEI 333
C+ GD+ + + V +E+
Sbjct: 361 YCKAGDVDSGLVVYREM 377
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 3/246 (1%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
V ++L Q Y G +LI + GK P++A ++F EM C + AL++
Sbjct: 136 VFELLREQLWYK--PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVS 193
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
AY S ++ + + + + +PD+ +Y+ +IK+F + F+ +L +M + G+
Sbjct: 194 AYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIR 253
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVE 258
P+ IT+NTL+D F E E QM G+ + PD + N+ L +
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMEN 313
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
++ + ++P++ + N ++ + GN + ++K T+ ++
Sbjct: 314 CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFG 373
Query: 319 EKGDLK 324
GDLK
Sbjct: 374 RAGDLK 379
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 8/247 (3%)
Query: 75 KQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFDEM-PERNC 127
K F V + Q SD ++G IT YGK+ M +M E +C
Sbjct: 229 KSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDC 288
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
+ N+ L A+ + Q ++E +++ ++P++ ++N ++ ++ KS ++
Sbjct: 289 KPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS-GIEPNIRTFNILLDSYGKSGNYKKMS 347
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
+++E M+K S ++T+N ++D G ++ E L+ M + + P + + +
Sbjct: 348 AVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY 407
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
K + L+ +E D++ DL N ++ + E K +EK PDK
Sbjct: 408 GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
Query: 308 NTFATLV 314
T+ T+V
Sbjct: 468 ITYRTMV 474
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 48/239 (20%)
Query: 67 TVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKRARQMFD 120
T+R G G I+++E+ Y F G + T YGKSG K+ + +
Sbjct: 298 TLRAFGG----NGQIEMMENC--YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVME 351
Query: 121 EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS 180
M + + + T++++N ++ A+ + + +E +F+ + E + P V+ ++++A+ ++
Sbjct: 352 YMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSE-RIFPSCVTLCSLVRAYGRA 410
Query: 181 KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSY 240
+ +L +E + + DL+ FN L+D A GR E+ + +M G
Sbjct: 411 SKADKIGGVLRFIENSDIRLDLVFFNCLVD---AYGRMEK----FAEMKG---------- 453
Query: 241 NARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
L+ MEKK KPD + ++K + G K+ G +E
Sbjct: 454 ------------------VLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVE 494
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 72/297 (24%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL----HSKQYRVVE---RIF 154
LI+ K+ M R Q+FDEM + + S+N L++ Y H + ++++ +
Sbjct: 89 LISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 155 KEVPG---------------------------EISVKPDLVSYNTVIKAFCKSKVFESAV 187
VPG + VKP+L++YN +I CKS+ S
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVD 208
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM--------GGKNL------ 233
M+ E++K+G +P+ +T+ T+L + R E+G +L+ +M G N
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSAL 268
Query: 234 ----------------------SPDIRSYNARLLGLAVEKKTGEAV-EFLQEMEKKDVKP 270
S DI SYN LL L + +AV + L+E+E K +KP
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNT-LLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
D ++ I+ G +N GN A+K I + P T L+ LC+ G + A+
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 131 VLSFNALLAAYLH----SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
V+++N L+ Y + Y V R+ E ++PD+ +YN++I K+ +
Sbjct: 48 VITYNTLIKGYTRFIGIDEAYAVTRRM-----REAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ-MGGKNLSPDIRSYNARLL 245
+ + +EM +G+SPD+ ++NTL+ + GR E K+ + + L P I +YN L
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
L T A+E + ++ + VKP+L + N +I G + E++KS P
Sbjct: 163 ALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 306 DKNTFATLV 314
+ T+ T++
Sbjct: 222 NAVTYTTML 230
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ V PD+++YNT+IK + + + A ++ M + G+ PD+ T+N+L+ G
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE-MEKKDVKPDLFSLNAII 279
+L+ +M LSPD+ SYN + + GEA + L E + + P + + N ++
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
G+ D A + F + KS P+ T+ L+ LC+
Sbjct: 162 DALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCK 200
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N + + CK + E A ++L + + GV PD+IT+NTL+ G +E + +M
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
+ PD+ +YN+ + G A ++ EM + PD++S N ++ + G E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 291 AKKWFGE-IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
A K E I + P +T+ L+ LC+ G AI++ K +
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL 180
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KSG A ++F + R ++++N L+ S++ V+ + +E+ + P+
Sbjct: 166 KSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELK-KSGYTPNA 223
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGV----------------------------- 198
V+Y T++K + K+K E + + +M+K G
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Query: 199 -------SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK 251
S D++++NTLL+ + +G + + L ++ K L PD ++ + GL
Sbjct: 284 LVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Query: 252 KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
TG A + L + + ++P + + N +I G G++D A + F +E D+ T+
Sbjct: 344 NTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYT 399
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFN 335
++V LC+ G L A ++ +N
Sbjct: 400 SVVHNLCKDGRLVCASKLLLSCYN 423
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 100/210 (47%), Gaps = 3/210 (1%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V ++N+L++ + V ++F E+ + PD+ SYNT++ + K A +L
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHS-GLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 191 -EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
E++ G+ P + T+N LLD L G + +L+ + + + P++ +YN + GL
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCK 200
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
++ G ++E++K P+ + ++K + +++ + F +++K D
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFA 260
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
+V L + G + A + + E+ + R
Sbjct: 261 NCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Query: 79 GVIDILEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
G +D + + + S ++ + ++ +Y K+ ++ Q+F +M + T + A+
Sbjct: 205 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 264
Query: 138 LAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG 197
++A + + + E+ + D+VSYNT++ + K ++ +LEE+E G
Sbjct: 265 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 324
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV 257
+ PD T +++GL G EK +G + P + + N + GL A+
Sbjct: 325 LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384
Query: 258 EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
ME +D F+ +++ +G L A K
Sbjct: 385 RLFASMEVRDE----FTYTSVVHNLCKDGRLVCASKLL 418
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 79 GVIDIL--EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNA 136
G +IL E Q + + ++ F+ LI Y + GM A ++D M ++ V + N
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNT-LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 137 LLAAYLHSKQYRVVER-IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
+ + + K+Y ++ +F+ + G VK VSY +I +CK E A + EM
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEG--GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
GV P+ IT+N ++ +G+ +E KL M + PD +Y + + G + E
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
A+ EM K + + + +I G G DEA + E+++ D + L+
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI K G A + +EM + T + FN L+ Y I+ +V +
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY-DVMEQK 428
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ D+ + NT+ F + K ++ A L M + GV +++ L+D EG EE
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++L+ +M K + P+ +YN + + K EA + ME + PD ++ ++I G
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N+DEA + F E+ D + T+ ++ L + G A + E+
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++F M + TV S ++ + +++ KE + +KP+ +YNT+I A
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIINA 268
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
+ K + F +L+ M+K+GV + +T+ L++ G+ + EKL+ +M + + D
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
+ Y + + + A E+ +K + P ++ A+I G G + A+
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 297 EIEKSENDPDKNTFATLVPFLCEKG 321
E++ + + F TL+ C KG
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKG 413
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 131/334 (39%), Gaps = 40/334 (11%)
Query: 42 RKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR 101
+KL+ +F V + + Y + + F GV +L+ K+ +
Sbjct: 244 KKLIKEF----SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ L K+G A ++FDEM ER + ++
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERG------------------------------IESDV 329
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V L+S+N C+ + A + +E+ + G+SP T+ L+DG+ G
Sbjct: 330 HVYTSLISWN------CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E L +M K ++ +N + G + EA ME+K + D+F+ N I
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F DEAK+W + + ++ L+ C++G+++ A + E+ + +
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 342 APLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
A +++ + + EA+++ + N P
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 105 LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVK 164
+Y +GM + ++FD M ++ + S L A ++ + IF+ + + VK
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV-DSGVK 221
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
+ S V++ C+ E + +++E G+ P+ T+NT+++ + F E +
Sbjct: 222 ITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGV 281
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEK-KTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
M + + +Y L+ L+V+ K +A + EM ++ ++ D+ ++I
Sbjct: 282 LKVMKKDGVVYNKVTYTL-LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+GN+ A F E+ + P T+ L+ +C+ G++ A ++ E+ + +
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 344 LLQLVVDKLVSESMLSEAKEIVEL 367
+ ++D + M+ EA I ++
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDV 424
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 107/201 (53%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P L Y V++ + + VS+L +M+ + V PDL+ + +L G+ A+ + + +KL
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+ ++ L+PD+ +YN + GL + A++ + M K +P++ + N +IK V
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
G+L AK + E+E + + + +TF ++ E ++ A +++E FN V +
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428
Query: 345 LQLVVDKLVSESMLSEAKEIV 365
++ V+ +L + ++ +A E++
Sbjct: 429 IEEVISRLCEKGLMDQAVELL 449
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 135/319 (42%), Gaps = 19/319 (5%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDF-SKEGFSARLITLYGKSGMPKRARQMFDEM 122
Y ++ LA + Q + +L H + F + E +I YG SG + A ++F ++
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 123 PERNCTRTVLSFNALLAAYLHSKQ-YRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
P C + + NALL + +Q +V I + + V+ + ++ +I A C+
Sbjct: 135 PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA-CRMGVRLEESTFGILIDALCRIG 193
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE---------GRFEEGEKLWGQMGGKN 232
+ A ++ M ++ V D ++ LL + G E+ K
Sbjct: 194 EVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK-------TR 246
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
SP +R Y + L + E V L +M+ V+PDL +++G + + + +A
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
K F E+ PD T+ + LC++ D++ A+ ++ + +++ L
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 353 VSESMLSEAKEIVELGKTN 371
V LS AK + + +TN
Sbjct: 367 VKAGDLSRAKTLWKEMETN 385
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 114 RARQMFDEMPERNCTRT---VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSY 170
R +++ + + C R ++ + +L + + Y +++F E+ + + PD+ +Y
Sbjct: 266 RGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDEL-LLLGLAPDVYTY 324
Query: 171 NTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
N I CK E A+ M+ M K G P+++T+N L+ L G + LW +M
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDE 290
++ + +++ + + A L+E +V + +I +G +D+
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQ 444
Query: 291 AKKWFGEI 298
A + +
Sbjct: 445 AVELLAHL 452
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 30/313 (9%)
Query: 60 KTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSK-------------EGFSARLITLY 106
K G++ DTV R V+ IL +K ++ E ++ +Y
Sbjct: 403 KVGLFPDTVTH-------RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 107 GKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPD 166
G+ +A+ +F+ + +C + + A++ Y + E +F + D
Sbjct: 456 VNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++ YN +IKA+ K+K+ E A+S+ + M+ G PD T+N+L L +E +++
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+M P ++Y A + +AV+ + MEK VKP+ ++I GF G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
++EA ++F +E+ + +L+ + G L+ A V ++ ++ G P
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE---GGP--- 688
Query: 347 LVVDKLVSESMLS 359
D S SMLS
Sbjct: 689 ---DVAASNSMLS 698
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE-VPGE 160
L+ +YGK+G+ K A M +R ++ ++ + +S ++ +R FK G+
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 161 ISVKPDLV---------SYNTVIKAFCKSKVF--------ESAVSMLEEMEKNGVSPDLI 203
+ + D + +K F ++F E ++ + + P L
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLT 305
Query: 204 -TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
TFNTL+D GR + L+ +M + D ++N + EA L++
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
ME+K + PD + N ++ + G+++ A +++ +I K PD T ++ LC++
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 323 LKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ V+ E+ R+ + +++ V+E ++ +AK + E
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 125/317 (39%), Gaps = 36/317 (11%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y ++ AK + + + K + E L + + A+++ EM
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+ C ++ A++A+Y+ ++ E + VKP+ V Y ++I F +S +
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLY-EAMEKTGVKPNEVVYGSLINGFAESGMV 636
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
E A+ ME++GV + I +L+ G EE +++ +M PD+ + N+
Sbjct: 637 EEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Query: 244 L-----LGLAVEKKT-----------------------------GEAVEFLQEMEKKDVK 269
L LG+ E ++ EA+E +EM + +
Sbjct: 697 LSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 270 PDLFSLNAIIKGFVNEGNLDEAKKWFGE-IEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
D S N ++ + +G L E + F E + + + D TF TL L + G A+
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Query: 329 VVKEIFNTRCRVGAPLL 345
++ +N + P +
Sbjct: 817 QLQTAYNEAKPLATPAI 833
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G + AR+++D+M + V + N++L+ E IF + +
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ D++S+ T++ + + + A+ + EEM ++G+ D +FN ++ A+G+ E
Sbjct: 721 TC--DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSEC 778
Query: 222 EKL-------------WGQM---------GG---KNLSPDIRSYN-ARLLGLAVEKKT-- 253
+L WG GG + +S +YN A+ L T
Sbjct: 779 CELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLF 838
Query: 254 ------GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
A+E QE+ ++ + F+ NA+I + G++D A K + +++ +PD
Sbjct: 839 SAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDI 898
Query: 308 NTFATLVPFLCEKG 321
T A LV + G
Sbjct: 899 VTQAYLVGIYGKAG 912
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y G + ++ M ER +R V+++ +L+ Y E +F E+ E
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEK 325
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ D Y ++ +C++ AV + + M + GV + N+L++G G+ E
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+++ +M +L PD +YN + G EA++ +M +K+V P + + N ++KG
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ G + + + K + D+ + +TL+ L + GD A+ + + +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
L +++ L ++EAKEI++
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILD 530
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G+ + A +F+ + E+ + L+ Y + Q R R+ + EI
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI-EI 360
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+ + N++I +CKS A + M + PD T+NTL+DG G +E
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL QM K + P + +YN L G + + + + M K+ V D S + +++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G+ +EA K + + D T ++ LC+ + A +++ + RC+
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 76 QFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFN 135
Q R + + ++ + + LI Y KSG A Q+F M + + ++N
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 136 ALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
L+ Y + ++ ++ + V P +++YN ++K + + F +S+ + M K
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
GV+ D I+ +TLL+ L+ G F E KLW + + L D + N + GL +K E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
A E L + KP + + A+ G+ GNL EA +E+ P + TL+
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 316 FLCEKGDLKTAIDVVKEI 333
+ L D+V E+
Sbjct: 585 GAFKYRHLNKVADLVIEL 602
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++D+M + V + + ++ AY S KE + ++ ++V+YN++I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ E +L M + GVS +++T+ +L+ G +G EE E ++ + K L
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
D Y + G + +AV M + V+ + N++I G+ G L EA++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + PD +T+ TLV C G + A+ + ++
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 1/269 (0%)
Query: 58 RTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQ 117
RT T I + + Q I +S L+ Y ++G A +
Sbjct: 363 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 422
Query: 118 MFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 177
+ D+M ++ TV+++N LL Y + V ++K + V D +S +T+++A
Sbjct: 423 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR-GVNADEISCSTLLEAL 481
Query: 178 CKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDI 237
K F A+ + E + G+ D IT N ++ GL + E +++ + P +
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 238 RSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
++Y A G EA + ME+K + P + N +I G +L++ E
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+ P T+ L+ C G + A
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKA 630
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 38/321 (11%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIY---EDTVRRLAGAKQFRG---V 80
+ ++LS YK NL K+A V + + GI+ E ++GA ++R V
Sbjct: 543 TYQALSHGYYKVGNL-------KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKV 595
Query: 81 IDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
D++ + LIT + GM +A EM E+ T N + +
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT-----LNVNICS 650
Query: 141 YLHSKQYRV---------VERIFK---EVPGEISVKPDL-VSYNTVIKAFCKSKVFESAV 187
+ + +R+ +++I +PG S+K L S T +K K+ ES
Sbjct: 651 KIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT---QKIAESVE 707
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM-GGKNLSPDIRSYNARLLG 246
+ K + P+ I +N + GL G+ E+ KL+ + PD +Y + G
Sbjct: 708 N---STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
A+ +A EM K + P++ + NA+IKG GN+D A++ ++ + P+
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 307 KNTFATLVPFLCEKGDLKTAI 327
T+ TL+ L + G++ A+
Sbjct: 825 AITYNTLIDGLVKSGNVAEAM 845
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
K A + + P++ + +N +A + + ++F ++ PD +Y
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
+I + A ++ +EM G+ P+++T+N L+ GL G + ++L ++ K
Sbjct: 761 LIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
++P+ +YN + GL EA+ ++M +K +++G +G++D K
Sbjct: 821 ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK----------GLVRGSDKQGDVDIPK 870
Query: 293 K 293
+
Sbjct: 871 E 871
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
K++S FS F ++ +Y + G+ K A +FD M ++LS N+LL+ + +
Sbjct: 149 KEFS-FSPTVFDM-ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGEN 206
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFN 206
V ++ ++ V PD+ + + V+ A+C+S + A+ +E E + G+ +++T+N
Sbjct: 207 FVALHVYDQMI-SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 207 TLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
+L++G G E ++ L+ M ++
Sbjct: 266 SLINGYAMIGDVEGMTRV-----------------------------------LRLMSER 290
Query: 267 DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
V ++ + ++IKG+ +G ++EA+ F +++ + D++ + L+ C G ++ A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 327 IDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ V + R + +++ L EA++I
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ L+ +YGK G + ARQ+F+ M ++N +S++ALL Y + ++ IF+E+
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNS----VSWSALLGGYCQNGEHEKAIEIFREME- 358
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ DL + TV+KA + + + G ++I + L+D G +
Sbjct: 359 ----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCID 414
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+++ +M +N+ ++NA L LA + EAV F +M KK +KPD S AI+
Sbjct: 415 SASRVYSKMSIRNMI----TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 280 KGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ G +DE + +F + KS P ++ ++ L G + A ++++ C
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER---AEC 527
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKE 363
R A L +++ + + S E
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAE 552
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 74 AKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLS 133
+ F GV+ + H +++ F S+ L LYG + P AR++FDEMPE + V+
Sbjct: 182 GRCFHGVV--ITHGFEWNHF----ISSTLAYLYGVNREPVDARRVFDEMPEPD----VIC 231
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+ A+L+A+ + Y +F + + PD ++ TV+ A + + + ++
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
NG+ +++ ++LLD G E +++ M KN S++A L G +
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV----SWSALLGGYCQNGEH 347
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+A+E +EME+K DL+ ++K
Sbjct: 348 EKAIEIFREMEEK----DLYCFGTVLK 370
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 161/337 (47%), Gaps = 16/337 (4%)
Query: 31 LSQDLYKEVNLRKLV-DKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQ 89
++ L+ E+ R L D++ + + F K G+++ + L +Q R D++
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSF-GKEGMFDSALSWLQKMEQDRVSGDLV----L 227
Query: 90 YSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRV 149
YS+ LI L + +A +F + T ++++N+++ Y +K +R
Sbjct: 228 YSN---------LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
+ KE+ E V P+ VSY+T++ + ++ F A+S+ EM++ + DL T N ++
Sbjct: 279 ARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
D +E ++L+ + ++ P++ SYN L + GEA+ + M++KD++
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 270 PDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
++ + N +IK + ++A E++ +P+ T++T++ + G L A +
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 330 VKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+++ ++ + L Q ++ ++ AK ++
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLH 494
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 42 RKLVDKFKKACDVDRFRTKTGI------YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSK 95
R+L D + KA + ++GI Y + AK FR +++ +
Sbjct: 236 RRLCD-YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 96 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK 155
+ L+++Y ++ A +F EM E NC + + N ++ Y + +R+F
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
+ ++ ++P++VSYNT+++ + ++++F A+ + M++ + +++T+NT++
Sbjct: 355 SL-RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
E+ L +M + + P+ +Y+ + K A Q++ V+ D
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
+I + G + AK+ E++ +N P + T + L + G + A V ++ F
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRE----TAITILAKAGRTEEATWVFRQAFE 529
Query: 336 T 336
+
Sbjct: 530 S 530
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
V E P + +YN V++ ++K F+ A + +EM + ++PD T++TL+ EG
Sbjct: 145 VHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEG 204
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK-KTGEAVEFLQEMEKKDVKPDLFSL 275
F+ +M +S D+ Y + L+ L+ +A+ +++ + PDL +
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLY-SNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAY 263
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
N++I + EA+ E+ ++ P+ +++TL+ E A+ V E+
Sbjct: 264 NSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
C + +++D M+ EA +
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRL 352
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 31 LSQDLYKEV-----NLRKLVDKF-KKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDIL 84
LS DL EV + RK +F A + F + Y + LA +QF ++ +L
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVL 218
Query: 85 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
E + E F+ + + + K+A +F+ M + V + N LL + +
Sbjct: 219 EEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
K + + +F ++ + P++++Y ++ +C+ + A + +M +G+ PD++
Sbjct: 278 KLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 335
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
N +L+GL + + KL+ M K P++RSY + + A+E+ +M
Sbjct: 336 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++PD +I GF + LD + E+++ + PD T+ L+ + +
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 67 TVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDEMPER 125
++ A AK+ + + I E K+Y E + L +L G++ + K A+ +FD++ ER
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER 293
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV----------------- 168
T ++++ LL + + RI+ ++ +KPD+V
Sbjct: 294 -FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 169 ------------------SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
SY +I+ FCK E+A+ ++M +G+ PD + L+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
G + + + +L +M K PD ++YNA + +A +K +M + +++P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ + N I+K + N + + + E+ K PD N++ L+ L +G + A +
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 331 KEIFN 335
+E+ +
Sbjct: 532 EEMLD 536
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K + A + FD+M + + L+ + K+ V + KE+ E
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ-EK 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD +YN +IK K+ E + +M +N + P + TFN ++ + +E G
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+W +M K + PD SY + GL E K+ EA +L+EM K +K L N
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 282 FVNEGN 287
F G
Sbjct: 553 FHRGGQ 558
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
T+ +F + A+ +K+ + IF E+ + K + + N ++ + ++K+ + A +
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVL 286
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+++ K +P+++T+ LL+G E ++W M L PDI ++N L GL
Sbjct: 287 FDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 345
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
K +A++ M+ K P++ S +I+ F + +++ A ++F ++ S PD
Sbjct: 346 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ + L T +++KE+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEM 429
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 114/236 (48%), Gaps = 7/236 (2%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEV--PGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
++N++++ ++Q+ + + +E+ G ++++ ++ +KAF +K + AV +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME----TFTIAMKAFAAAKERKKAVGIF 252
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E M+K + T N LLD L +E + L+ ++ + +P++ +Y L G
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRV 311
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ EA +M +KPD+ + N +++G + +A K F ++ P+ ++
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
++ C++ ++TAI+ ++ ++ + A + ++ ++ L E+++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 132/268 (49%), Gaps = 12/268 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +Y K+G ++AR++F M + ++ +++N+L++ Y+ V +I+ ++
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQ-RS 315
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD+VSY +IKA+ +++ E A+S+ EEM GV P +N LLD G E+
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ ++ M + PD+ SY L A +F + ++ +P++ + +IKG
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ ++++ + + ++ S ++ T++ + +A+ KE+ C G
Sbjct: 436 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM--ESC--G 491
Query: 342 APLLQLVVDKLVS----ESMLSEAKEIV 365
P Q + L+S + L EAKE+
Sbjct: 492 VPPDQKAKNVLLSLASTQDELEEAKELT 519
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 67 TVRRLAGAKQFRGVIDILE--HQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
T+ R K++ V +ILE + + +FS+ F LIT YGK G A ++ + +
Sbjct: 116 TLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDF-LMLITAYGKLGNFNGAERVLSVLSK 174
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV------PGEIS---------------- 162
T V+S+ AL+ +Y + E IF+ + P I+
Sbjct: 175 MGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKE 234
Query: 163 ---------------VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+KPD Y+ +I + K+ +E A + M GV +T+N+
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+ E ++E K++ QM ++ PD+ SY + ++ EA+ +EM
Sbjct: 295 LMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 351
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
V+P + N ++ F G +++AK F + + PD ++ T++ D++ A
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAE 411
Query: 328 DVVKEI 333
K I
Sbjct: 412 KFFKRI 417
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 87 QKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
Q Q SD + S A LI YG++ + A +F+EM + T ++N LL A+ S
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
+ +FK + + + PDL SY T++ A+ + E A + ++ +G P+++T+
Sbjct: 371 MVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
TL+ G E+ +++ +M + + + K G A+ + +EME
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
V PD + N ++ + L+EAK+ G
Sbjct: 490 CGVPPDQKAKNVLLSLASTQDELEEAKELTG 520
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 132 LSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
+ F L+ AY + ER+ V ++ P+++SY +++++ + +A ++
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVL-SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN---LSPDIRSYNARLLGLA 248
M+ +G P IT+ +L +F+E E+++ + + L PD + Y+ + +
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH---MMIY 262
Query: 249 VEKKTG---EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
+ KK G +A + M K V + N+++ E + E K + ++++S+ P
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQP 319
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
D ++A L+ + A+ V +E+ + R +++D M+ +AK +
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 366 ELGKTNRYHP 375
+ + +R P
Sbjct: 380 KSMRRDRIFP 389
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 140/307 (45%), Gaps = 7/307 (2%)
Query: 63 IYEDTVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDE 121
+ + V L+ +QF V ++E ++ + + + L+ + + M K+A ++ DE
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 122 MPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSK 181
MP+ F LL A + + ++F+++ + P+L + +++ +C+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP--PNLRYFTSLLYGWCREG 250
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
A +L +M++ G+ PD++ F LL G G+ + L M + P++ Y
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 242 ARLLGLA-VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
+ L EK+ EA+ EME+ + D+ + A+I GF G +D+ ++ K
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 301 SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSE 360
P + T+ ++ +K + +++++++ C L+ VV +L + L E
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDL-LIYNVVIRLACK--LGE 427
Query: 361 AKEIVEL 367
KE V L
Sbjct: 428 VKEAVRL 434
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 105 LYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
LYG + G A+++ +M E ++ F LL+ Y H+ + + ++
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR-G 301
Query: 163 VKPDLVSYNTVIKAFCKS-KVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+P++ Y +I+A C++ K + A+ + EME+ G D++T+ L+ G G ++G
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ M K + P +Y ++ +++ E +E +++M+++ PDL N +I+
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
G + EA + + E+E + P +TF ++ +G L A + KE+ +R
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV-SRGIFS 480
Query: 342 AP---LLQLVVDKLVSESMLSEAKEI 364
AP L+ +++ LV + L AK++
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDV 506
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 31 LSQDLYKEV-----NLRKLVDKF-KKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDIL 84
LS DL EV + RK +F A + F + Y + LA +QF ++ +L
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 217
Query: 85 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
E + E F+ + + + K+A +F+ M + V + N LL + +
Sbjct: 218 EEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 276
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
K + + +F ++ + P++++Y ++ +C+ + A + +M +G+ PD++
Sbjct: 277 KLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 334
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
N +L+GL + + KL+ M K P++RSY + + A+E+ +M
Sbjct: 335 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 394
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++PD +I GF + LD + E+++ + PD T+ L+ + +
Sbjct: 395 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 67 TVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDEMPER 125
++ A AK+ + + I E K+Y E + L +L G++ + K A+ +FD++ ER
Sbjct: 234 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER 292
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV----------------- 168
T ++++ LL + + RI+ ++ +KPD+V
Sbjct: 293 -FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 169 ------------------SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
SY +I+ FCK E+A+ ++M +G+ PD + L+
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
G + + + +L +M K PD ++YNA + +A +K +M + +++P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ + N I+K + N + + + E+ K PD N++ L+ L +G + A +
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 331 KEIFN 335
+E+ +
Sbjct: 531 EEMLD 535
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K + A + FD+M + + L+ + K+ V + KE+ E
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ-EK 431
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD +YN +IK K+ E + +M +N + P + TFN ++ + +E G
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+W +M K + PD SY + GL E K+ EA +L+EM K +K L N
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 551
Query: 282 FVNEGN 287
F G
Sbjct: 552 FHRGGQ 557
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
T+ +F + A+ +K+ + IF E+ + K + + N ++ + ++K+ + A +
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVL 285
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+++ K +P+++T+ LL+G E ++W M L PDI ++N L GL
Sbjct: 286 FDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 344
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
K +A++ M+ K P++ S +I+ F + +++ A ++F ++ S PD
Sbjct: 345 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ + L T +++KE+
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEM 428
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 114/236 (48%), Gaps = 7/236 (2%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEV--PGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
++N++++ ++Q+ + + +E+ G ++++ ++ +KAF +K + AV +
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME----TFTIAMKAFAAAKERKKAVGIF 251
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E M+K + T N LLD L +E + L+ ++ + +P++ +Y L G
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRV 310
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ EA +M +KPD+ + N +++G + +A K F ++ P+ ++
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
++ C++ ++TAI+ ++ ++ + A + ++ ++ L E+++
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 54 VDRFRTKTGIYEDTV----RRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGK 108
V+R R + +TV RR AGA ++ + I + ++ + + E + L TL K
Sbjct: 144 VERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL-CK 202
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISVKPD 166
++AR + ++ + + T +FN + + K RV E ++ +E+ G +P
Sbjct: 203 EKRVEQARVVLLQL-KSHITPNAHTFNIFIHGW--CKANRVEEALWTIQEMKGH-GFRPC 258
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++SY T+I+ +C+ F ML EME NG P+ IT+ T++ L A+ FEE ++
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVAT 318
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE-FLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M PD YN + LA + EA F EM + V + + N++I + +
Sbjct: 319 RMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 286 GNLDEAKKWFGEIEKSE-NDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
D+A + E+E S +PD +T+ L+ ++GD+ ++KE+
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 167 LVSYNTVIKA---FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
LV+ NTV K F + +E AV + + + + G+ + + N LLD L E R E+
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ Q+ +++P+ ++N + G + EA+ +QEM+ +P + S II+ +
Sbjct: 212 VLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+ + + E+E + + P+ T+ T++ L + + + A+ V + + C+ +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 344 LLQLVVDKLVSESMLSEAK-----EIVELG 368
++ L L EA+ E+ ELG
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELG 360
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 54 VDRFRTKTGIYEDTV----RRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGK 108
V+R R + +TV RR AGA ++ + I + ++ + + E + L TL K
Sbjct: 144 VERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL-CK 202
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISVKPD 166
++AR + ++ + + T +FN + + K RV E ++ +E+ G +P
Sbjct: 203 EKRVEQARVVLLQL-KSHITPNAHTFNIFIHGW--CKANRVEEALWTIQEMKGH-GFRPC 258
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
++SY T+I+ +C+ F ML EME NG P+ IT+ T++ L A+ FEE ++
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVAT 318
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE-FLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M PD YN + LA + EA F EM + V + + N++I + +
Sbjct: 319 RMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 286 GNLDEAKKWFGEIEKSE-NDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
D+A + E+E S +PD +T+ L+ ++GD+ ++KE+
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 167 LVSYNTVIKA---FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
LV+ NTV K F + +E AV + + + + G+ + + N LLD L E R E+
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ Q+ +++P+ ++N + G + EA+ +QEM+ +P + S II+ +
Sbjct: 212 VLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+ + + E+E + + P+ T+ T++ L + + + A+ V + + C+ +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 344 LLQLVVDKLVSESMLSEAK-----EIVELG 368
++ L L EA+ E+ ELG
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELG 360
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 132/268 (49%), Gaps = 12/268 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +Y K+G ++AR++F M + ++ +++N+L++ Y+ V +I+ ++
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQ-RS 308
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD+VSY +IKA+ +++ E A+S+ EEM GV P +N LLD G E+
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ ++ M + PD+ SY L A +F + ++ +P++ + +IKG
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ ++++ + + ++ S ++ T++ + +A+ KE+ C G
Sbjct: 429 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM--ESC--G 484
Query: 342 APLLQLVVDKLVS----ESMLSEAKEIV 365
P Q + L+S + L EAKE+
Sbjct: 485 VPPDQKAKNVLLSLASTQDELEEAKELT 512
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 67 TVRRLAGAKQFRGVIDILE--HQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
T+ R K++ V +ILE + + +FS+ F LIT YGK G A ++ + +
Sbjct: 109 TLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDF-LMLITAYGKLGNFNGAERVLSVLSK 167
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV------PGEIS---------------- 162
T V+S+ AL+ +Y + E IF+ + P I+
Sbjct: 168 MGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKE 227
Query: 163 ---------------VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+KPD Y+ +I + K+ +E A + M GV +T+N+
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+ E ++E K++ QM ++ PD+ SY + ++ EA+ +EM
Sbjct: 288 LMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 344
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
V+P + N ++ F G +++AK F + + PD ++ T++ D++ A
Sbjct: 345 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAE 404
Query: 328 DVVKEI 333
K I
Sbjct: 405 KFFKRI 410
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 87 QKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
Q Q SD + S A LI YG++ + A +F+EM + T ++N LL A+ S
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 146 QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF 205
+ +FK + + + PDL SY T++ A+ + E A + ++ +G P+++T+
Sbjct: 364 MVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 206 NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK 265
TL+ G E+ +++ +M + + + K G A+ + +EME
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 266 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG 296
V PD + N ++ + L+EAK+ G
Sbjct: 483 CGVPPDQKAKNVLLSLASTQDELEEAKELTG 513
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 132 LSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
+ F L+ AY + ER+ V ++ P+++SY +++++ + +A ++
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVL-SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 192 EMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN---LSPDIRSYNARLLGLA 248
M+ +G P IT+ +L +F+E E+++ + + L PD + Y+ + +
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH---MMIY 255
Query: 249 VEKKTG---EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
+ KK G +A + M K V + N+++ E + E K + ++++S+ P
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQP 312
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
D ++A L+ + A+ V +E+ + R +++D M+ +AK +
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 366 ELGKTNRYHP 375
+ + +R P
Sbjct: 373 KSMRRDRIFP 382
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+++Y+ +IKA CK+ A + EM G+ P + T+N+++DG EG + G
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M +PD+ +Y + + GL + EA+ EM+ KD P+ + A+I+G
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTF 310
G EA +F E+E+ E +PD +
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 114/289 (39%), Gaps = 52/289 (17%)
Query: 96 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK 155
E S L+ + K G +A ++ + + ER+ ++ L+ ++ + ++F+
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE 307
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD-------------- 201
++ + + D+ Y+ +I CK K E A+S+ E++++G+ PD
Sbjct: 308 KMR-RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Query: 202 -------------------LITFNTLLDGLYAEGRFEEGEKLWGQMGG------------ 230
++ + +L +G E + G
Sbjct: 367 SELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVK 426
Query: 231 ------KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
K + PD S + + L K AV L ++ + + P N II+G
Sbjct: 427 LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
EG +E+ K GE++ + +P + T + L E+ D A+D++K++
Sbjct: 487 EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 134/329 (40%), Gaps = 56/329 (17%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRG----VIDILEHQKQYSDFSKEGFSARLI 103
F A + +R Y L+ A+Q V+D+L + F G I
Sbjct: 93 FNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRC----FMSPGAFGFFI 148
Query: 104 TLYGKSGMPKRARQMFDEMPERN-CTRTVLSFNALLAAYLHSKQYRV--VERIFKEVPGE 160
G +G+ A +FD + E C ++N LL A S V VE KE+ +
Sbjct: 149 RCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMR-D 207
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
D + V++ +C + E A+S+ E+ G + I+ T+L + +
Sbjct: 208 CGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS--TILVVSFCK----- 260
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
WGQ+ +A E ++ +E++D++ + + +I
Sbjct: 261 ----WGQVD-------------------------KAFELIEMLEERDIRLNYKTYCVLIH 291
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
GFV E +D+A + F ++ + + D + L+ LC+ DL+ A+ + EI R
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK----RS 347
Query: 341 GAPLLQLVVDKLVS----ESMLSEAKEIV 365
G P + ++ KL+ ES LS E++
Sbjct: 348 GIPPDRGILGKLLCSFSEESELSRITEVI 376
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++ PD S + VI K+ + AV++L ++ +NG+ P + +N +++G+ EGR EE
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
KL G+M + P + N LA A++ L++M +P + ++K
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 282 FVNEGNLDEAKKWFGEI 298
G +A K+ ++
Sbjct: 554 LCENGRAVDACKYLDDV 570
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + YN +I+ CK E ++ +L EM+ GV P T N + L F L
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+M P I+ + L + +A ++L ++ + + + A I G +
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIK 591
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
+D + F +I + + PD + L+ LC+
Sbjct: 592 NEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK 626
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 141/284 (49%), Gaps = 13/284 (4%)
Query: 56 RFRTKTGIYEDTVRRLAGAKQFRGVID----ILEHQKQYSDFSKEGFSARLITLYGKSGM 111
RF+ + GI +D L+ +++ V D I ++ +Y F + F+ L G
Sbjct: 225 RFKLEMGI-DDFQSLLSALCRYKNVSDAGHLIFCNKDKYP-FDAKSFNIVLNGWCNVIGS 282
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
P+ A +++ EM V+S++++++ Y V ++F + E ++PD YN
Sbjct: 283 PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE-CIEPDRKVYN 341
Query: 172 TVIKAFCKSKVFESAVSMLEEMEK-NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG 230
V+ A K+ A ++++ ME+ G+ P+++T+N+L+ L + EE ++++ +M
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 231 KNLSPDIRSYNARLLGLAVEKKTGEAV-EFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
K L P IR+Y+A + L +TGE V E L +M K +P + + +I+ + D
Sbjct: 402 KGLFPTIRTYHAFMRIL----RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ E+++ PD +++ ++ L G ++ A KE+
Sbjct: 458 NVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ +I+ Y K G + ++FD M + +NA++ A + + K +
Sbjct: 306 SSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEE 365
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E ++P++V+YN++IK CK++ E A + +EM + G+ P + T++ + L E
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---E 422
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E +L +M P + +Y + L + + EM++K V PDL S +I
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
G G ++EA ++ E++ P++N
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 67 TVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDEMPER 125
++ A AK+ + + I E K+Y E + L +L G++ + K A+ +FD++ ER
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKER 293
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV----------------- 168
T ++++ LL + + RI+ ++ + +KPD+V
Sbjct: 294 -FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKKSD 351
Query: 169 ------------------SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD 210
SY +I+ FCK E+A+ ++M +G+ PD + L+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 211 GLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
G + + + +L +M K PD ++YNA + +A +K A +M + +++P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ + N I+K + N + + + E+ K PD N++ L+ L +G + A +
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 331 KEIFN 335
+E+ +
Sbjct: 532 EEMLD 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 9/296 (3%)
Query: 31 LSQDLYKEV-----NLRKLVDKF-KKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDIL 84
LS DL EV + RK +F A + F + Y + LA +QF ++ +L
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 218
Query: 85 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
E + E F+ + + + K+A +F+ M + V + N LL + +
Sbjct: 219 EEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA 277
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
K + + +F ++ + P++++Y ++ +C+ + A + +M G+ PD++
Sbjct: 278 KLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVA 335
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
N +L+GL + + KL+ M K P++RSY + + A+E+ +M
Sbjct: 336 HNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++PD +I GF + LD + E+++ + PD T+ L+ + +
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K + A + FD+M + + L+ + K+ V + KE+ E
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ-EK 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD +YN +IK K+ E A + +M +N + P + TFN ++ + +E G
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+W +M K + PD SY + GL E K+ EA +L+EM K +K L N
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 282 FVNEGN 287
F G
Sbjct: 553 FHRGGQ 558
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
T+ +F + A+ +K+ + IF E+ + K + + N ++ + ++K+ + A +
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVL 286
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+++ K +P+++T+ LL+G E ++W M + L PDI ++N L GL
Sbjct: 287 FDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR 345
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+K +A++ M+ K P++ S +I+ F + +++ A ++F ++ S PD
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ + L T +++KE+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEM 429
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEV--PGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
++N++++ ++Q+ + + +E+ G ++++ ++ +KAF +K + AV +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME----TFTIAMKAFAAAKERKKAVGIF 252
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E M+K + T N LLD L +E + L+ ++ + +P++ +Y L G
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRV 311
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ EA +M + +KPD+ + N +++G + +A K F ++ P+ ++
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
++ C++ ++TAI+ ++ ++ + A + ++ ++ L E+++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 33 QDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDIL-EHQKQYS 91
+D K+ ++ ++ F D + +Y + K+ V ++L E Q++
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSG-LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 92 DFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE 151
+ ++A LI L MP+ A +++++M + ++ +FN ++ +Y ++ Y +
Sbjct: 435 PPDGKTYNA-LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGR 493
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
+++E+ + + PD SY +I+ A LEEM G+ LI +N
Sbjct: 494 AVWEEMIKK-GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 212 LYAEGRFEEGEKL 224
+ G+ E E+L
Sbjct: 553 FHRGGQPEIFEEL 565
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 10/310 (3%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y + A +Q++ + D++ ++ + E F ++ Y ++ A F+ M
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCI-VMRKYARAQKVDEAIYAFNVME 195
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+ + +++FN LL+A SK R + +F+ + + PD +Y+ +++ + K
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT--PDSKTYSILLEGWGKEPNL 253
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
A + EM G PD++T++ ++D L GR +E + M P Y+
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
+ E + EAV+ EME+ +K D+ N++I F + + E++
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
P+ + ++ L E+G+ A DV +++ C A +V+ M E KE
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVI------KMFCEKKE 426
Query: 364 IVELGKTNRY 373
+ K +Y
Sbjct: 427 METADKVWKY 436
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 122/263 (46%), Gaps = 3/263 (1%)
Query: 71 LAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRT 130
L +K R ++ E+ + + +S L+ +GK +AR++F EM + C
Sbjct: 213 LCKSKNVRKAQEVFENMRDRFTPDSKTYSI-LLEGWGKEPNLPKAREVFREMIDAGCHPD 271
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
+++++ ++ + + I + + I KP Y+ ++ + E AV
Sbjct: 272 IVTYSIMVDILCKAGRVDEALGIVRSMDPSIC-KPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
EME++G+ D+ FN+L+ R + ++ +M K ++P+ +S N L L
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ EA + ++M K +PD + +IK F + ++ A K + + K P +TF
Sbjct: 391 GEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 311 ATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ LCE+ + A +++E+
Sbjct: 450 SVLINGLCEERTTQKACVLLEEM 472
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ YG + A F EM V FN+L+ A+ + + + V R+ KE+ +
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK- 371
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V P+ S N +++ + + A + +M K PD T+ ++ + E
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETA 430
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
+K+W M K + P + +++ + GL E+ T +A L+EM + ++P
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVF 183
+R+ +V +++ ++ + +QY+++ + + + + ++ ++ V++ + +++
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML--NVETFCIVMRKYARAQKV 184
Query: 184 ESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNAR 243
+ A+ MEK + P+L+ FN LL L + ++++ M + +PD ++Y+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 244 LLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
L G E +A E +EM PD+ + + ++ G +DEA ++ S
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 304 DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
P ++ LV + L+ A+D E+
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 142/298 (47%), Gaps = 4/298 (1%)
Query: 68 VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNC 127
+R + +++ +I + E +Q+ S +S+ I G + K A +++ +P+ +
Sbjct: 105 LRDFGISGRWQDLIQLFEWMQQHGKISVSTYSS-CIKFVGAKNVSK-ALEIYQSIPDEST 162
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKV-FESA 186
V N++L+ + + + ++F ++ + +KPD+V+YNT++ K K + A
Sbjct: 163 KINVYICNSILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGYPKA 221
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ ++ E+ NG+ D + + T+L + GR EE E QM + SP+I Y++ L
Sbjct: 222 IELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS 281
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ + +A E + EM+ + P+ + ++K ++ G D +++ E+E + +
Sbjct: 282 YSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAEN 341
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ + L+ L + G L+ A + ++ R +++ L EAKE+
Sbjct: 342 EMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ + +G + A +M + + +++LL +Y Y+ + + E+ I
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS-I 301
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ P+ V T++K + K +F+ + +L E+E G + + + + L+DGL G+ EE
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ M GK + D + + + L K+ EA E ++ E K DL LN ++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCA 421
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ G ++ + ++++ PD NTF L+ +
Sbjct: 422 YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 56 RFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDF-------SKEGFSARLITLYGK 108
R+ T+ GIY VR L+ + E + + D ++ + + L +L G
Sbjct: 368 RYMTQ-GIYSYLVRTLSKLGH------VSEAHRLFCDMWSFPVKGERDSYMSMLESLCG- 419
Query: 109 SGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV 168
+G A +M ++ E+ + +N + +A KQ + +F+++ + PD+
Sbjct: 420 AGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD-GPSPDIF 478
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+YN +I +F + + A+++ EE+E++ PD+I++N+L++ L G +E + +M
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 229 GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
K L+PD+ +Y+ + ++ A +EM K +P++ + N ++ G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 289 DEAKKWFGEIEKSENDPDKNTFATL 313
EA + ++++ PD T+ L
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 33/295 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA-------------------YL 142
L+ + K M +A Q+F M E C +++ LL Y+
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 143 HSKQYRVVERIFKEVPGEIS-------------VKPDLVSYNTVIKAFCKSKVFESAVSM 189
Y + R ++ G +S VK + SY +++++ C + A+ M
Sbjct: 371 TQGIYSYLVRTLSKL-GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
L ++ + GV D + +NT+ L + L+ +M SPDI +YN +
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+ EA+ +E+E+ D KPD+ S N++I G++DEA F E+++ +PD T
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
++TL+ + ++ A + +E+ C+ +++D L +EA ++
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
++E K+Y +G + L+ K G A ++F +M S+ ++L +
Sbjct: 362 VVEISKRYM---TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 143 HS-KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
+ K +E + K E V D + YNTV A K K + E+M+K+G SPD
Sbjct: 419 GAGKTIEAIEMLSK--IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQ 261
+ T+N L+ G +E ++ ++ + PDI SYN+ + L EA +
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 262 EMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
EM++K + PD+ + + +++ F ++ A F E+ P+ T+ L+ L + G
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Query: 322 DLKTAIDVVKEI 333
A+D+ ++
Sbjct: 597 RTAEAVDLYSKM 608
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 68/288 (23%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
++A Q+F++M +R+C R ++ ++ + +F E+ E + ++V YNT
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNT 310
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF-------------- 218
+++ K K+ + A+ + M + G P+ T++ LL+ L AEG+
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 219 ------------------EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
E +L+ M + + SY + L L KT EA+E L
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 261 QEMEKKDV-----------------------------------KPDLFSLNAIIKGFVNE 285
++ +K V PD+F+ N +I F
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G +DEA F E+E+S+ PD ++ +L+ L + GD+ A KE+
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 112/236 (47%), Gaps = 11/236 (4%)
Query: 101 RLITLYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
R+I + +S +P R R + D M + N + + N L+ + +++ ++ R+ K+
Sbjct: 138 RIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKK- 196
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+K + +Y +++A+ +S+ + A + E+ + G D+ +N LLD L +
Sbjct: 197 ---WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AK 250
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
E+ +++ M ++ D +Y + + K EAV EM + + ++ N
Sbjct: 251 DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+++ +D+A + F + ++ P++ T++ L+ L +G L +D V EI
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL-VRLDGVVEI 365
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 55/357 (15%)
Query: 54 VDRFRTKTGIYEDTV----RRLAGAKQFRGVIDILEHQKQY------SDFSKEGFSARLI 103
VD + K + ++T RR A A++ + I +++ SDF+ R++
Sbjct: 151 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN------RML 204
Query: 104 TLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISV 163
KS A+++FD+M ++ + S+ LL + V+ + +E+ E
Sbjct: 205 DTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE-GF 263
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE--- 220
+PD+V+Y +I A CK+K +E A+ EME+ P F +L++GL +E + +
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 221 ---------------------GEKLWGQ-----------MGGKNLSPDIRSYNARLLGLA 248
G W Q M K + P+ R+Y+ L L
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 249 VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN 308
+++ EA E Q M +P + + +++ F N+ LD A K + E++ P +
Sbjct: 384 RMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 309 TFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
F++L+ LC + L A + E+ + R + + L+ E + ++V
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 155/374 (41%), Gaps = 46/374 (12%)
Query: 31 LSQDLYKEVNLRKLVDK-------FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDI 83
LS L +EV L+KL + FK A + F+ T Y + L KQF+ + +
Sbjct: 92 LSPALIEEV-LKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 84 LEHQKQYSDFSKEGFSA----------------------------------RLITLYGKS 109
++ K SKE F+ R++ KS
Sbjct: 151 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 210
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
A+++FD+M ++ + S+ LL + V+ + +E+ E +PD+V+
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE-GFEPDVVA 269
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y +I A CK+K +E A+ EME+ P F +L++GL +E + + + + +
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ +YNA + ++ +A + + EM K V P+ + + I+ + +
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI---RMQ 386
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
+K+ + + +P +T+ +V C K L AI + E+ G + ++
Sbjct: 387 RSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 350 DKLVSESMLSEAKE 363
L E+ L EA E
Sbjct: 447 TALCHENKLDEACE 460
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME-KNGVSPDLITFNTLLDG 211
+FK + K +YN +I++ K K F+ S++++M+ K +S + TF L+
Sbjct: 114 VFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE--TF-ALISR 170
Query: 212 LYAEGR-FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKP 270
YA R +E + +M + +N L L+ + G+A + +M+KK +P
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 271 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
D+ S +++G+ E NL + E++ +PD + ++ C+ + AI
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 331 KEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRY 373
E+ C+ + +++ L SE L++A E E K++ +
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGF 333
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 19/250 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI LY K G +RQMFD MP+R+ +S+N+++ Y+ +F +P E+
Sbjct: 162 LIGLYLKCGCLGLSRQMFDRMPKRDS----VSYNSMIDGYVKCGLIVSARELFDLMPMEM 217
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+L+S+N++I + ++ V + ++ + DLI++N+++DG GR E+
Sbjct: 218 K---NLISWNSMISGYAQT---SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDA 271
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L+ M + D+ ++ + G A A +M +DV + N+++ G
Sbjct: 272 KGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV----VAYNSMMAG 323
Query: 282 FVNEGNLDEAKKWFGEIEK-SENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
+V EA + F ++EK S PD T ++P + + G L AID+ I + +
Sbjct: 324 YVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 383
Query: 341 GAPLLQLVVD 350
G L ++D
Sbjct: 384 GGKLGVALID 393
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
A +I Y K G A+ +FD+MP R+ V+++N+++A Y+ +K + IF ++
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRD----VVAYNSMMAGYVQNKYHMEALEIFSDMEK 342
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSM-LEEMEKN-------GVSPDLITFNTLLDG 211
E + PD + V+ A + A+ M L +EK GV+ L+D
Sbjct: 343 ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVA--------LIDM 394
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
G + ++ + K+ I +NA + GLA+ A + L ++E+ +KPD
Sbjct: 395 YSKCGSIQHAMLVFEGIENKS----IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 450
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEI-EKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ ++ + G + E F + K + +P + +V L G ++ A +++
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 510
Query: 331 KEI 333
+E+
Sbjct: 511 EEM 513
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEK 223
PD +YN ++K CK K ++EM + V PDL++F L+D + E
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L ++G PD YN + G K EAV ++M+++ V+PD + N +I G
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
G ++EA+ + + + +PD T+ +L+ +C KG
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
++G A+ + E+ E++ ++N LL K VV E+ + VKPDL
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
VS+ +I C SK A+ ++ ++ G PD +NT++ G + E ++ +
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
M + + PD +YN + GL+ + EA +L+ M +PD + +++ G +G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 115 ARQMFDEMPERNCTRTVLSF-NALLAAY----LHSKQYRVVERIFKEVPGEISVKPDLVS 169
A+ +F+ + + L F N++L +Y + + ++ + I K P + +P +
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQP---NFRPGRST 124
Query: 170 YNTVIKAFCKSKVFESAVS----MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
+ ++ C++ +S++S +L M NG+ PD +T + + L GR +E + L
Sbjct: 125 FLILLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK-DVKPDLFSLNAIIKGFVN 284
++ K+ PD +YN L L K EF+ EM DVKPDL S +I N
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
NL EA ++ + PD + T++ C A+ V K++
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++PD V+ + +++ C++ + A +++E+ + PD T+N LL L
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 223 KLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +M ++ PD+ S+ + + K EA+ + ++ KPD F N I+KG
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD-------LKTAIDVVKE-- 332
F EA + ++++ +PD+ T+ TL+ L + G LKT +D E
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 333 ------IFNTRCRVG 341
+ N CR G
Sbjct: 335 TATYTSLMNGMCRKG 349
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 2/209 (0%)
Query: 119 FDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC 178
F+EM T ++FN LL Y +K ++ V +F V D++SYNT+I A+
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV--DVISYNTIIAAYG 744
Query: 179 KSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
K+K + + S ++ M+ +G S L +NTLLD + + E+ + +M PD
Sbjct: 745 KNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHY 804
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI 298
+YN + + E + L+E+++ + PDL S N +IK + G ++EA E+
Sbjct: 805 TYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 299 EKSENDPDKNTFATLVPFLCEKGDLKTAI 327
PDK T+ LV L + AI
Sbjct: 865 RGRNIIPDKVTYTNLVTALRRNDEFLEAI 893
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 2/193 (1%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ +YGK+ + K+ ++F + +R+ V+S+N ++AAY +K Y + K + +
Sbjct: 705 LLDVYGKAKLFKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD- 762
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
L +YNT++ A+ K K E S+L+ M+K+ PD T+N +++ +G +E
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ ++ L PD+ SYN + + EAV ++EM +++ PD + ++
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Query: 282 FVNEGNLDEAKKW 294
EA KW
Sbjct: 883 LRRNDEFLEAIKW 895
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 23/283 (8%)
Query: 65 EDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPE 124
ED ++ L G +F QK Y F+ +I K G K A + F M E
Sbjct: 194 EDLIKELCGFHEF---------QKSYQVFNT------VIYACTKKGNVKLASKWFHMMLE 238
Query: 125 RNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLV---SYNTVIKAFCKSK 181
V + L+ Y + E F + K +V +Y+++I + + +
Sbjct: 239 FGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR-----KFGIVCESAYSSMITIYTRLR 293
Query: 182 VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN 241
+++ A +++ M+++ V L + +L+ +G+ E E + M SP+I +YN
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 242 ARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
+ G K A + ++PD S ++I+G+ N +EAK ++ E+++
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 302 ENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
P+ TL+ + GD AI ++++ C+ + L
Sbjct: 414 GYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL 456
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 78 RGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNAL 137
GV+D++ + +I YGK+ M + ++ ++N L
Sbjct: 728 HGVVDVISYNT-------------IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 138 LAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG 197
L AY KQ I K + S PD +YN +I + + + +L+E++++G
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTS-GPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Query: 198 VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV 257
+ PDL ++NTL+ G EE L +M G+N+ PD +Y + L + EA+
Sbjct: 834 LGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAI 893
Query: 258 EFLQEMEKKDV 268
++ M++ +
Sbjct: 894 KWSLWMKQMGI 904
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
++ AL +++ V ++ E+P I + PD + T+I+ F ++++ + +S+++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
+ K G+ P L FN++LD L E E +M + D+ +Y + GL++ +
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
G+ + LQ M+ V P+ N ++ G + A+ E++ +P+ TF
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNI 253
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
L+ C + L ++ ++++ F+ + V++ L +E +SEA E++E
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLE 307
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V P+ V YNT++ A CK+ A S++ EM++ P+ +TFN L+ E + +
Sbjct: 213 VAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSM 268
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
L + PD+ + + L E + EA+E L+ +E K K D+ + N ++KG+
Sbjct: 269 VLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGY 328
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G + A+++F E+E+ P+ T+ L+ C+ G L +A+D ++
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G RAR + EM E N ++FN L++AY + +Q + + E + PD+
Sbjct: 229 KNGKVGRARSLMSEMKEPN----DVTFNILISAYCN-EQKLIQSMVLLEKCFSLGFVPDV 283
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V+ V++ C A+ +LE +E G D++ NTL+ G A G+ ++ + +
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M K P++ +YN + G A++ +M+ ++ + + N +I+G G
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
D+ K I + D D A + P+ C
Sbjct: 404 TDDGLK----ILEMMQDSDTVHGARIDPYNC 430
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V++ N L+ Y + RV +R F E+ + P++ +YN +I +C + +SA+
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERK-GYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL--SPDIRSYNARLLGLA 248
+M+ + + + TFNTL+ GL GR ++G K+ M + I YN + G
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFY 436
Query: 249 VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN 308
E + +A+EFL +MEK + P + + +G +D+ K + ++ P
Sbjct: 437 KENRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 309 TFATLVPFLCEKGDLKTAIDVVKEI 333
L+ + G ++ +++++ ++
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDM 519
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 75 KQFRGVIDILEHQKQYSDFSKEGFSARLIT--------LYG--KSGMPKRAR-----QMF 119
K F ++D+L K+ D ++E F+ +++ YG G+ R ++
Sbjct: 148 KVFNSILDVL--VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLL 205
Query: 120 DEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK 179
M + +N LL A + + + E+ +P+ V++N +I A+C
Sbjct: 206 QIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-----EPNDVTFNILISAYCN 260
Query: 180 SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRS 239
+ ++ +LE+ G PD++T +++ L EGR E ++ ++ K D+ +
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 240 YNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE 299
N + G K A F EME+K P++ + N +I G+ + G LD A F +++
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 300 KSENDPDKNTFATLV 314
+ TF TL+
Sbjct: 381 TDAIRWNFATFNTLI 395
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 38/262 (14%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y GM A F++M +FN L+ + +I + +
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Query: 162 SVKPDLVS-YNTVIKAFCKSKVFESAVSMLEEMEK------------------------- 195
+V + YN VI F K +E A+ L +MEK
Sbjct: 419 TVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLK 478
Query: 196 --------NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
G P +I + L+ G+ EE +L M + P ++NA ++G
Sbjct: 479 TAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGF 538
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
+ K ++F+++M ++ PD S N +++ +G++ +A F + + PD
Sbjct: 539 CKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDP 598
Query: 308 NTFATLVPFLCEKGDLKTAIDV 329
+ +++L+ L + KTAI V
Sbjct: 599 SMWSSLMFCLSQ----KTAIHV 616
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEEG 221
+PD + NTVI CK + A+ +L++M +PD +T NT++ GL A+GR EE
Sbjct: 443 CRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEA 502
Query: 222 EKLWGQMGGKN-LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ ++ +N + P + +YNA + GL K EA+ ++EK V D + II
Sbjct: 503 LDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIID 562
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G +D AKK++ ++ D +A + LC+ G L A + ++ ++
Sbjct: 563 GLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIP 622
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
V+ + + EA +I+E + N P
Sbjct: 623 NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 60 KTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMF 119
+T IY +R L ++++L Q E +I K G A ++
Sbjct: 411 RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 120 DEM-PERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFC 178
D+M + C ++ N ++ L + + V E +KP +V+YN VI+
Sbjct: 471 DDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLF 530
Query: 179 KSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIR 238
K + A+S+ ++EK V+ D T+ ++DGL + + +K W + + D
Sbjct: 531 KLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAF 590
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI 298
Y A L GL +A FL ++ P++ N +I G EA + E+
Sbjct: 591 VYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEM 650
Query: 299 EKSENDPDKNTFATL 313
K+ PD T+ L
Sbjct: 651 RKNGQAPDAVTWRIL 665
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 36/202 (17%)
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG-------RFEEG 221
+Y +I + C+ + A ++ M+ G+ P ++N ++ GL +G EEG
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 222 E-----------KLWGQMGGKNL-----------------SPDIRSYNARLLGLAVEKKT 253
KL + K L + R YN L GL V
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE-NDPDKNTFAT 312
E + L M + D +PD ++LN +I G G +D+A K ++ + PD T T
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT 488
Query: 313 LVPFLCEKGDLKTAIDVVKEIF 334
++ L +G + A+DV+ +
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVM 510
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL-YAEGRFEEGE 222
+PD ++ ++VI + C + F+ A +G PD T N ++ L Y+
Sbjct: 87 RPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLG 146
Query: 223 KLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ +G K P + +YN + L + +A + + +M + PD+ + +I G
Sbjct: 147 VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF-----NT 336
+ L+ A K F E+ P+ T + L+ + D++T ++KE++ T
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 337 RCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ A +VD + E ++ EI E
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAE 296
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 71 LAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRT 130
L A + + I ++E L+ K G A Q+ ++M +
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 131 VLSFNALLAAYLH----SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
+++NAL+ ++ + VER+ ++ + P+ +Y+ +++A K + + A
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQK-----GLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
V +L+E+ G P+L+++N LL G EGR ++ L+ ++ K ++ SYN L
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-- 304
L + + EA L EM+ D P + + N +I G ++A + E+ K +
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
++ ++ LC++G + + + E+ RC+
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 7/257 (2%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++ DE+ + ++S+N LL + + +F+E+P + K ++VSYN ++
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK-GFKANVVSYNILL 288
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM--GGKN 232
+ C +E A S+L EM+ +P ++T+N L++ L GR E+ ++ +M G
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
SYN + L E K V+ L EM + KP+ + NAI + + EA
Sbjct: 349 FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAF 408
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV--GAPLLQLVVD 350
+ + + + +++ LC KG+ A ++ E+ TRC A ++
Sbjct: 409 YIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM--TRCGFDPDAHTYSALIR 466
Query: 351 KLVSESMLSEAKEIVEL 367
L E M + A E++ +
Sbjct: 467 GLCLEGMFTGAMEVLSI 483
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
+ V+YN +++ C ++ +E + + G++P+ T++ LL+ Y E +E KL
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
++ K P++ SYN L G E +T +A+ +E+ K K ++ S N +++ +
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF--NTRCRVGAP 343
G +EA E++ + P T+ L+ L G + A+ V+KE+ N + RV A
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 344 LLQLVVDKLVSE 355
V+ +L E
Sbjct: 355 SYNPVIARLCKE 366
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 86 HQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
HQ + + S ARL K G + DEM R C ++NA+ + H+
Sbjct: 347 HQFRVTATSYNPVIARLC----KEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNS 402
Query: 146 QYRVVERIFKEVPG-EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+ + I + + + D Y +VI + C+ +A +L EM + G PD T
Sbjct: 403 KVQEAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHT 460
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMG-GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
++ L+ GL EG F ++ M +N P + ++NA +LGL ++T A+E + M
Sbjct: 461 YSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMM 520
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI 298
+K P+ + +++G +E L+ AK+ E+
Sbjct: 521 VEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 83/170 (48%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
KP++ ++ CK+ + A+ ++E M +G+ PD + L++ L G +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L +M + +YNA + GL + ++++F++ + +K + P+ F+ + +++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E DEA K EI +P+ ++ L+ C++G A+ + +E+
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 126/309 (40%), Gaps = 48/309 (15%)
Query: 90 YSDFSKEGFSARLIT------LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+ + +GF A +++ G + A + EM + +V+++N L+ +
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 144 SKQYRVVERIFKEVP-GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+ ++ KE+ G + SYN VI CK + V L+EM P+
Sbjct: 329 HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 203 ITFN-----------------------------------TLLDGLYAEGRFEEGEKLWGQ 227
T+N +++ L +G +L +
Sbjct: 389 GTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYE 448
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK-KDVKPDLFSLNAIIKGFVNEG 286
M PD +Y+A + GL +E A+E L ME+ ++ KP + + NA+I G
Sbjct: 449 MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIR 508
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
D A + F + + + P++ T+A LV + + +L+ A +V+ E+ R+ + Q
Sbjct: 509 RTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL-----RLRKVIGQ 563
Query: 347 LVVDKLVSE 355
VD++V +
Sbjct: 564 NAVDRIVMQ 572
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y K G A+Q + + C ++ + + + K+ ++FKE+ +
Sbjct: 161 LVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEM-TQN 219
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ VSY +I ++K + A+S+L +M+ + P++ T+ L+D L G+ E
Sbjct: 220 GCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEA 279
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ QM + PD Y + EA L+ M + + P++ + NA+IKG
Sbjct: 280 MNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG 339
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
F + N+ +A ++ + PD T+ TL+ C G+L +A
Sbjct: 340 FCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L++ + G+ + ++++ EM E + + +FN L+ Y Y V + + +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC-KLGYVVEAKQYVTWLIQA 184
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
PD +Y + I C+ K ++A + +EM +NG + +++ L+ GL+ + +E
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L +M N P++R+Y + L + EA+ ++M + +KPD +I+
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
F + LDEA + ++ P+ T+ L+ C+K
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN 344
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F EM + C R +S+ L+ +K+ + ++ + + P++ +Y +I
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD-NCCPNVRTYTVLI 267
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
A C S A+++ ++M ++G+ PD + L+ + +E L M L
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ +YNA + G +K +A+ L +M ++++ PDL + N +I G + GNLD A +
Sbjct: 328 PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Query: 295 FGEIEKSENDPDKNT 309
+E+S P++ T
Sbjct: 387 LSLMEESGLVPNQRT 401
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
EI K YN ++ + + + E + EM ++ VSPD+ TFNTL++G G
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E ++ + PD +Y + + G K+ A + +EM + + S +I
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
G +DEA +++ P+ T+ L+ LC G A+++ K++ + +
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ +++ S L EA ++E N P
Sbjct: 293 PDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 91 SDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
SD +K G +T + GM A ++ +M ++ + V+++ LL
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+ + K++ ++ + ++ CK+ + A+S+ +M+ +G+SPDL+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ ++ GL G+F+ L+ +M K + P+ R++ A LLGL + EA L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
D+ N +I G+ G ++EA + F + ++ P TF +L+ C+ ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 325 TA---IDVVK 331
A +DV+K
Sbjct: 521 EARKILDVIK 530
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 13/293 (4%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQ----YSDFSKEGFSA-RL 102
FK+ D+ FR + LAG ++F+ + ILE Q + + G L
Sbjct: 71 FKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDML 130
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
+ L + M + + +M ++N + S+N++L H ++ + ++KE+ +
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---YHFRETDKMWDVYKEIKDK-- 185
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ +Y+TV+ C+ + E AV L E + P +++FN+++ G G + +
Sbjct: 186 ---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK 242
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ + L P + S+N + GL + EA+E +M K V+PD + N + KGF
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
G + A + ++ PD T+ L+ C+ G++ + ++K++ +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y KSG + A ++F + E T +V +FN+L+ Y ++ +I +V + P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGLAP 536
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL------------Y 213
+VSY T++ A+ +S + EM+ G+ P +T++ + GL
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
E FE+ ++ M + + PD +YN + L K A FL+ M+ +++
Sbjct: 597 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ N +I G + +A + +++ K + TL+ C KGD + A+ + ++
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLS 359
+ V V+++L +++
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 8/302 (2%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF 98
+N LV +A ++ K G+ D+V AK F + I + D +G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 99 SARLIT----LYGKS--GMPKRARQMFDEMPERNC-TRTVLSFNALLAAYLHSKQYRVVE 151
S +IT L G+ G + +M R +++ + +L+ + +
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
+F ++ + + PDLV+Y+ VI CK F+ A+ + +EM + P+ T LL G
Sbjct: 384 SLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L +G E L + + DI YN + G A EA+E + + + + P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ + N++I G+ N+ EA+K I+ P ++ TL+ G+ K+ ++ +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 332 EI 333
E+
Sbjct: 563 EM 564
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 36/249 (14%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL------------- 209
V+PD V+YN + K F + A ++ +M G+SPD+IT+ LL
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 210 -----------------------DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
GL GR +E L+ QM LSPD+ +Y+ + G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L K A+ EM K + P+ + A++ G +G L EA+ + S D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ ++ + G ++ A+++ K + T ++ ++EA++I++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 367 LGKTNRYHP 375
+ K P
Sbjct: 528 VIKLYGLAP 536
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 90 YSDFSKEGFSARL----ITLYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
++ +G S L I ++G K G A ++DEM ++ + ALL L
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-LC 444
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
K + R + D+V YN VI + KS E A+ + + + + G++P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
TFN+L+ G E K+ + L+P + SY + A T E +EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 264 EKKDVKPDLFSLNAIIKGF------------VNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
+ + + P + + I KG + E ++ K+ ++E PD+ T+
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTR 337
T++ +LC L A V EI +R
Sbjct: 625 TIIQYLCRVKHLSGAF-VFLEIMKSR 649
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G A +F++M + +++++ ++ ++ + ++ E+ + + P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK-RILPNS 433
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++ ++ C+ + A S+L+ + +G + D++ +N ++DG G EE +L+
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ ++P + ++N+ + G + EA + L ++ + P + S ++ + N GN
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 288 ---LDEAKKWFGEIEKSENDPDKN-TFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+DE ++ K+E P N T++ + LC + V++E +C+ G
Sbjct: 554 TKSIDELRREM----KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEM-----PERNCTRTVLSFNALLAAYLHSKQYRVV-ERIFK 155
L+ Y G K ++ EM P N T +V+ F L + H V+ ERIF+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI-FKGLCRGWKHENCNHVLRERIFE 602
Query: 156 EVPGEI------SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
+ + + PD ++YNT+I+ C+ K A LE M+ + T+N L+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
D L G + + + +N+S +Y + V+ AV+ ++ +
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Query: 270 PDLFSLNAII 279
+ +A+I
Sbjct: 723 VSIRDYSAVI 732
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 91 SDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 144
SD +K G +T + GM A ++ +M ++ + V+++ LL
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+ + K++ ++ + ++ CK+ + A+S+ +M+ +G+SPDL+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
++ ++ GL G+F+ L+ +M K + P+ R++ A LLGL + EA L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
D+ N +I G+ G ++EA + F + ++ P TF +L+ C+ ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 325 TA---IDVVK 331
A +DV+K
Sbjct: 521 EARKILDVIK 530
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 13/293 (4%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQ----YSDFSKEGFSA-RL 102
FK+ D+ FR + LAG ++F+ + ILE Q + + G L
Sbjct: 71 FKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDML 130
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
+ L + M + + +M ++N + S+N++L H ++ + ++KE+ +
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---YHFRETDKMWDVYKEIKDK-- 185
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ +Y+TV+ C+ + E AV L E + P +++FN+++ G G + +
Sbjct: 186 ---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK 242
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ + L P + S+N + GL + EA+E +M K V+PD + N + KGF
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
G + A + ++ PD T+ L+ C+ G++ + ++K++ +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y KSG + A ++F + E T +V +FN+L+ Y ++ +I +V + P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGLAP 536
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL------------Y 213
+VSY T++ A+ +S + EM+ G+ P +T++ + GL
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
E FE+ ++ M + + PD +YN + L K A FL+ M+ +++
Sbjct: 597 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ N +I G + +A + +++ K + TL+ C KGD + A+ + ++
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 334 FNTRCRVGAPLLQLVVDKLVSESMLS 359
+ V V+++L +++
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 8/302 (2%)
Query: 39 VNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF 98
+N LV +A ++ K G+ D+V AK F + I + D +G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 99 SARLIT----LYGKS--GMPKRARQMFDEMPERNC-TRTVLSFNALLAAYLHSKQYRVVE 151
S +IT L G+ G + +M R +++ + +L+ + +
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
+F ++ + + PDLV+Y+ VI CK F+ A+ + +EM + P+ T LL G
Sbjct: 384 SLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L +G E L + + DI YN + G A EA+E + + + + P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ + N++I G+ N+ EA+K I+ P ++ TL+ G+ K+ ++ +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 332 EI 333
E+
Sbjct: 563 EM 564
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 36/249 (14%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL------------- 209
V+PD V+YN + K F + A ++ +M G+SPD+IT+ LL
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 210 -----------------------DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
GL GR +E L+ QM LSPD+ +Y+ + G
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
L K A+ EM K + P+ + A++ G +G L EA+ + S D
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ ++ + G ++ A+++ K + T ++ ++EA++I++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 367 LGKTNRYHP 375
+ K P
Sbjct: 528 VIKLYGLAP 536
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 90 YSDFSKEGFSARL----ITLYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
++ +G S L I ++G K G A ++DEM ++ + ALL L
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-LC 444
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
K + R + D+V YN VI + KS E A+ + + + + G++P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
TFN+L+ G E K+ + L+P + SY + A T E +EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 264 EKKDVKPDLFSLNAIIKGF------------VNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
+ + + P + + I KG + E ++ K+ ++E PD+ T+
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTR 337
T++ +LC L A V EI +R
Sbjct: 625 TIIQYLCRVKHLSGAF-VFLEIMKSR 649
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 111/237 (46%), Gaps = 7/237 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G A +F++M + +++++ ++ ++ + ++ E+ + + P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK-RILPNS 433
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
++ ++ C+ + A S+L+ + +G + D++ +N ++DG G EE +L+
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ ++P + ++N+ + G + EA + L ++ + P + S ++ + N GN
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 288 ---LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+DE ++ E++ P T++ + LC + V++E +C+ G
Sbjct: 554 TKSIDELRR---EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEM-----PERNCTRTVLSFNALLAAYLHSKQYRVV-ERIFK 155
L+ Y G K ++ EM P N T +V+ F L + H V+ ERIF+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI-FKGLCRGWKHENCNHVLRERIFE 602
Query: 156 EVPGEI------SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
+ + + PD ++YNT+I+ C+ K A LE M+ + T+N L+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
D L G + + + +N+S +Y + V+ AV+ ++ +
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Query: 270 PDLFSLNAII 279
+ +A+I
Sbjct: 723 VSIRDYSAVI 732
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I LYGK+ + +++ EM C + ++ AL+ A+ E IF+++ E
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-ED 328
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD+ YN +++++ ++ A + M+ G PD ++N ++D G +
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E ++ +M ++P ++S+ L + + + ++EM + V+PD F LN+++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+ G + +K E+E D +T+ L+ + G L+
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y ++G P A ++F M C S+N ++ AY + + E +F+E+ +
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RL 398
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
+ P + S+ ++ A+ K++ ++++EM +NGV PD N++L+ LY G+F +
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTK 457
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG---EAVEFLQEMEKKDVKPDLFSLNA 277
EK+ +M + DI +YN + + + K G E E+++K+ +PD+ + +
Sbjct: 458 MEKILAEMENGPCTADISTYN---ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
I + + + + F E+ S PD T L+
Sbjct: 515 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V+ FN L+ AY QY+ E ++ ++ E P +Y +IKA+C + + E A +L
Sbjct: 155 VICFNLLIDAYGQKFQYKEAESLYVQLL-ESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 191 EEMEKNGVSPDLI---TFNTLLDGLYA-EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
EM+ + VSP I +N ++GL +G EE ++ +M P +YN +
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
K+ + + EM KP++ + A++ F EG ++A++ F ++++ +PD
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ L+ G A ++ + + C ++VD + S+A+ + E
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ YG++G+ A +F+EM T+ S LL+AY ++ E I KE+ E
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SEN 433
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+PD N+++ + + F +L EME + D+ T+N L++ G E
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+L+ ++ KN PD+ ++ +R+ + +K + +E +EM PD + ++
Sbjct: 494 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
+E +++ + K T ++LVP L K
Sbjct: 554 CSSEEQVEQVTSVLRTMHKGV------TVSSLVPKLMAK 586
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 13/242 (5%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNC---TRTVLSFNALLAAYLHSK-----QYRVVE 151
A LI Y +G+ +RA + EM + T V +NA + + K V +
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 253
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R+ ++ KP +YN +I + K+ + + EM + P++ T+ L++
Sbjct: 254 RMKRD-----RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 308
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
EG E+ E+++ Q+ L PD+ YNA + + A E M+ +PD
Sbjct: 309 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
S N ++ + G +A+ F E+++ P + L+ + D+ +VK
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 332 EI 333
E+
Sbjct: 429 EM 430
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE-MEKNGVSPDLITFNTL 208
V + +P + DL++ + ++ +K ++S + + E + K+ PD+I FN L
Sbjct: 105 VADVLGALPSTHASWDDLINVSVQLRL---NKKWDSIILVCEWILRKSSFQPDVICFNLL 161
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+D + +++E E L+ Q+ P +Y + + A L EM+ V
Sbjct: 162 IDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHV 221
Query: 269 KPDLFSL---NAIIKGFVN-EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
P + NA I+G + +GN +EA F +++ P T+ ++ +
Sbjct: 222 SPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY 281
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ + E+ + +C+ +V+ E + +A+EI E
Sbjct: 282 MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I LYGK+ + +++ EM C + ++ AL+ A+ E IF+++ E
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-ED 350
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
++PD+ YN +++++ ++ A + M+ G PD ++N ++D G +
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E ++ +M ++P ++S+ L + + + ++EM + V+PD F LN+++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
+ G + +K E+E D +T+ L+ + G L+
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 513
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y ++G P A ++F M C S+N ++ AY + + E +F+E+ +
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RL 420
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
+ P + S+ ++ A+ K++ ++++EM +NGV PD N++L+ LY G+F +
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTK 479
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG---EAVEFLQEMEKKDVKPDLFSLNA 277
EK+ +M + DI +YN + + + K G E E+++K+ +PD+ + +
Sbjct: 480 MEKILAEMENGPCTADISTYN---ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
I + + + + F E+ S PD T L+
Sbjct: 537 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 573
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 131 VLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSML 190
V+ FN L+ AY QY+ E ++ ++ E P +Y +IKA+C + + E A +L
Sbjct: 177 VICFNLLIDAYGQKFQYKEAESLYVQLL-ESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 191 EEMEKNGVSPDLI---TFNTLLDGLYA-EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
EM+ + VSP I +N ++GL +G EE ++ +M P +YN +
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
K+ + + EM KP++ + A++ F EG ++A++ F ++++ +PD
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ L+ G A ++ + + C ++VD + S+A+ + E
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ YG++G+ A +F+EM T+ S LL+AY ++ E I KE+ E
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM-SEN 455
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+PD N+++ + + F +L EME + D+ T+N L++ G E
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
E+L+ ++ KN PD+ ++ +R+ + +K + +E +EM PD + ++
Sbjct: 516 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
+E +++ + K T ++LVP L K
Sbjct: 576 CSSEEQVEQVTSVLRTMHKGV------TVSSLVPKLMAK 608
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 13/242 (5%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNC---TRTVLSFNALLAAYLHSK-----QYRVVE 151
A LI Y +G+ +RA + EM + T V +NA + + K V +
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 275
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
R+ ++ KP +YN +I + K+ + + EM + P++ T+ L++
Sbjct: 276 RMKRD-----RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 330
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
EG E+ E+++ Q+ L PD+ YNA + + A E M+ +PD
Sbjct: 331 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
S N ++ + G +A+ F E+++ P + L+ + D+ +VK
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Query: 332 EI 333
E+
Sbjct: 451 EM 452
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE-MEKNGVSPDLITFNTL 208
V + +P + DL++ + ++ +K ++S + + E + K+ PD+I FN L
Sbjct: 127 VADVLGALPSTHASWDDLINVSVQLRL---NKKWDSIILVCEWILRKSSFQPDVICFNLL 183
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
+D + +++E E L+ Q+ P +Y + + A L EM+ V
Sbjct: 184 IDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHV 243
Query: 269 KPDLFSL---NAIIKGFVN-EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
P + NA I+G + +GN +EA F +++ P T+ ++ +
Sbjct: 244 SPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY 303
Query: 325 TAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ + E+ + +C+ +V+ E + +A+EI E
Sbjct: 304 MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
G ++ Y KSG +A + + M + V +FN L+ Y S ++ + +F+E
Sbjct: 194 GVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFRE 253
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ E +P++VS+NT+I+ F S E V M EM + G T L+DGL EG
Sbjct: 254 M-KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREG 312
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
R ++ L + K + P Y + + L E K A+E ++E+ KK P +
Sbjct: 313 RVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+++G G ++A + ++ + PD TF L+ LC
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
F + + AY +++ F + I KP++ YNTV+ + KS + A+ + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
K PD+ TFN L++G +F+ L+ +M K P++ S+N + G K
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
E V+ EM + + + ++ G EG +D+A ++ P + + +L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 314 VPFLCEKGDLKTAIDVVKEIF---NTRCRVGAPLL 345
V LC + A+++++E++ T C + L
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQ--------YRVVER- 152
LI Y +S A +F EM E+ C V+SFN L+ +L S + Y ++E
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 153 -IFKEVPGEISVK------------------------PDLVSYNTVIKAFCKSKVFESAV 187
F E EI V P Y ++++ C A+
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
M+EE+ K G +P I TL++GL GR E+ +M + PD ++N L L
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
+ +A K +PD + + ++ GF EG E + E+ + PD
Sbjct: 414 CSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDI 473
Query: 308 NTFATLV 314
T+ L+
Sbjct: 474 FTYNRLM 480
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P ++ T+++ KS E A +E+M G+ PD +TFN LL L + + +L
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
K PD +Y+ + G E + E + EM KD+ PD+F+ N ++ G
Sbjct: 426 RLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSC 485
Query: 285 EG 286
G
Sbjct: 486 TG 487
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P++ YN + G +A+ F Q M K+ KPD+ + N +I G+ D A
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F E+++ +P+ +F TL+ G ++ + + E+ CR +++VD L
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 355 ESMLSEAKEIV 365
E + +A +V
Sbjct: 311 EGRVDDACGLV 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 114 RARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTV 173
RA +M +E+ ++ T ++ L+ S + F E + PD V++N +
Sbjct: 351 RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG-FMEKMMNAGILPDSVTFNLL 409
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
++ C S A + G PD T++ L+ G EGR +EGE L +M K++
Sbjct: 410 LRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 234 SPDIRSYNARLLGLAVEKK 252
PDI +YN + GL+ K
Sbjct: 470 LPDIFTYNRLMDGLSCTGK 488
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 267 DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
D KP++ N ++ G+V G++D+A +++ + K PD TF L+ C A
Sbjct: 188 DGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLA 247
Query: 327 IDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSE----AKEIVELG 368
+D+ +E+ C ++ +S + E A E++ELG
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 128/289 (44%), Gaps = 38/289 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + + MP + R ++M E + + A++++++ Q + E ++KE+ E
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV-EY 604
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+++PD+V Y +I AF + + A+S +E M++ G+ + + +N+L+ G +E
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Query: 222 EKLWG---QMGGKNLSPDIRSYNARL-------------------------------LGL 247
E ++ Q K PD+ + N + + L
Sbjct: 665 EAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMML 724
Query: 248 AVEKKTG---EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
+ KK G EA + ++M + + D S N+++ F +G EA + F E+ S
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLV 353
PD +TF +L L + G K A+ ++EI + G L + LV
Sbjct: 785 PDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 6/238 (2%)
Query: 92 DFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE 151
+ S EG+SA I YG+ G A ++F E N RTV+ +N ++ AY SK
Sbjct: 468 NMSSEGYSAN-IDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKAC 525
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
+F+ + V PD +YNT+++ + + LE+M + G D I + ++
Sbjct: 526 ELFESMMS-YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
G+ E+++ +M N+ PD+ Y + A +A+ +++ M++ + +
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN 644
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND---PDKNTFATLVPFLCEKGDLKTA 326
N++IK + G LDEA+ + ++ +S N PD T ++ E+ ++ A
Sbjct: 645 SVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK-----E 156
LI +Y K G+ A +M + ++ +L Y +++++ E FK E
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ V +YNT+I + KS + A + M + G+ P +TFNT++ G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE-AVEFLQEMEKKDVKPDLFSL 275
+ E L M + +PD R+YN L+ L + E A + +EM+ +KPD S
Sbjct: 348 QLGEVTSLMKTMK-LHCAPDTRTYNI-LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
++ F ++EA+ E++ + D+ T + L E L+ + K F+
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR-FH 464
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ + +D LSEA+ +
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERV 493
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
++A + AY ER+F + + K ++ YN +IKA+ SK E A + E M
Sbjct: 474 YSANIDAYGERGYLSEAERVF--ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
GV+PD T+NTL+ L + +G +M D Y A + +
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
A E +EM + +++PD+ +I F + GN+ +A + ++++ + + +L
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 314 VPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+ + G L A + +++ + + P
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 113 KRARQMFDEMPERNCTR-TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYN 171
+RA ++F+ + C V+ +N +L + ++R V+ ++ E+ + +KP +Y
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRK-GIKPINSTYG 226
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR-FEEGEKLWGQMGG 230
T+I + K + A+ L +M K G+ PD +T +L +Y + R F++ E+ + +
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQ-MYKKAREFQKAEEFFKKWSC 285
Query: 231 KNLSPDIR------SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
D +YN + + EA E + M ++ + P + N +I + N
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G L E + K PD T+ L+ + D++ A KE+
Sbjct: 346 NGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
FKE ++++ D V YN A K E A +L+EM+ G+ PD+I + TL+DG
Sbjct: 376 FKEFR-DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+G+ + L +M G +SPD+ +YN + GLA E +E + M+ + KP+
Sbjct: 435 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 494
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ + II+G + EA+ +F +E + P+ A+ V CE G + K+
Sbjct: 495 TNSVIIEGLCFARKVKEAEDFFSSLE--QKCPENK--ASFVKGYCEAG-------LSKKA 543
Query: 334 FNTRCRVGAPLLQLVVDK----LVSESMLSEAKEIVELGKTNRYHP 375
+ R+ PL + V K L E L +A ++++ R P
Sbjct: 544 YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 12/242 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE--RIFKEVPG 159
++ Y K M A + F E + N + +N A SK RV E + +E+
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDAL--SKLGRVEEAFELLQEMKD 416
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ PD+++Y T+I +C A+ +++EM NG+SPDLIT+N L+ GL G E
Sbjct: 417 R-GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E +++ +M + P+ + + + GL +K EA +F +E+K P+ + + +
Sbjct: 476 EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPE--NKASFV 531
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
KG+ G +A K F +E K+ + L LC +G L+ A DV+K++ R
Sbjct: 532 KGYCEAGLSKKAYKAFVRLEYPLR---KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVE 588
Query: 340 VG 341
G
Sbjct: 589 PG 590
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 100 ARLITLYGKSGMPKRARQMFD--EMPERNCTRTVLSFNALLAAYLHSKQYRVVERI--FK 155
A + Y ++G+ K+A + F E P R L F+ + YL K + V++++ ++
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE-KAHDVLKKMSAYR 586
Query: 156 EVPG----------------------------EISVKPDLVSYNTVIKAFCKSKVFESAV 187
PG E + PDL +Y +I +C+ + A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 188 SMLEEMEKNGVSPDLITFNTLLDG-LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
S+ E+M++ G+ PD++T+ LLD L + E + G++G + S +R ++A +G
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 247 LAVEKKT------------GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
L V T +A E M ++PD+ + +I + +G +D A
Sbjct: 707 LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
Query: 295 FGEIEKSENDPDKN 308
E+ K N P ++
Sbjct: 767 VTELSKKYNIPSES 780
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+K + V + +++ +CK + A+ +E + D + +N D L GR EE
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+L +M + + PD+ +Y + G ++ K +A++ + EM + PDL + N ++ G
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
G+ +E + + ++ P+ T + ++ LC +K A D
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAED 514
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 82 DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
D+L+ Y ++I + K + A+ +FD M ER + ++ ++ Y
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCK--SKVFES-----------AVS 188
+ + E +F+++ + +KPD+V+Y ++ + K + E+ A
Sbjct: 637 CRLNELQKAESLFEDMK-QRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASE 695
Query: 189 MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLA 248
+L E G+ D++ + L+D E+ +L+ +M L PD+ +Y +
Sbjct: 696 VLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYF 755
Query: 249 VEKKTGEAVEFLQEMEKK 266
+ AV + E+ KK
Sbjct: 756 RKGYIDMAVTLVTELSKK 773
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 14/282 (4%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYG 107
F A RF + Y +R+L AK ++ + DI+ E +I +
Sbjct: 159 FNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFT 218
Query: 108 KSGMPKRARQMFDEM-PERN--CTRTVLSFNALLAA--------YLHSKQYRVVERIFKE 156
K+G RA +F M +N C T+ +++ L A Y++ V +F++
Sbjct: 219 KAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQ 278
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK-NGVSPDLITFNTLLDGLYAE 215
+ ++PD+ + N ++K + S A+ + +M P+ T++ L+ GL A+
Sbjct: 279 MVDS-GIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQ 337
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
GR +L +M GK P+ +SYN+ + A+ + +AV+ L EM + D S
Sbjct: 338 GRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISY 397
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
++ +G DEA + E+ + + D++++ LV L
Sbjct: 398 RTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVNVL 438
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
+L+++Y K G AR++FD M ERN + +++A++ AY ++R V ++F+ + +
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRERN----LFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFE 219
V PD + +++ E+ + + K G+S L N++L +YA+ G +
Sbjct: 176 -GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL-AVYAKCGELD 233
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
K + +M + D+ ++N+ LL K EAVE ++EMEK+ + P L + N +I
Sbjct: 234 FATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
G+ G D A ++E D T+ ++ L G A+D+ +++F
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N++LA Y + + F+ + + D++++N+V+ A+C++ E AV +++EME
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMR-----ERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
K G+SP L+T+N L+ G G+ + L +M ++ D+ ++ A + GL
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKG-----FVNEGN 287
+A++ ++M V P+ ++ + + +N+G+
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 92 DFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSK 145
+ KEG S L+T Y + G A + +M T V ++ A+++ +H+
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 146 -QYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
+Y+ ++ K V P+ V+ + + A KV + K G D++
Sbjct: 332 MRYQALDMFRKMFLA--GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
N+L+D G+ E+ K++ + K D+ ++N+ + G G+A E M+
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEK 300
+++P++ + N +I G++ G+ EA F +EK
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 116/253 (45%), Gaps = 53/253 (20%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS----KQYRVVERIFKEV 157
L+ +Y K G + AR++FD + ++ V ++N+++ Y + K Y + R+
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYCGKAYELFTRM---- 444
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG-VSPDLITFNTLLDGLYAEG 216
+ +++P+++++NT+I + K+ A+ + + MEK+G V + T+N ++ G G
Sbjct: 445 -QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 217 RFEEGEKLWGQMGGKNLSPD------IRSYNARLLGL--------AVEKKTGEAVEFLQE 262
+ +E +L+ +M P+ + A LLG V ++ +A+ ++
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 263 ---------------------MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS 301
ME KD+ + N++I G+V G+ A F +++
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETKDI----ITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 302 ENDPDKNTFATLV 314
P++ T ++++
Sbjct: 620 GITPNRGTLSSII 632
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 146/361 (40%), Gaps = 42/361 (11%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEH-QKQYSDFSKEGFSARLITLY 106
F A R+ +Y+ V+ L+ +QF V ++E +K+ + L+ +
Sbjct: 134 FVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRF 193
Query: 107 GKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPD 166
+ M K+A ++ DEMP+ F LL A + ++F+++ V +
Sbjct: 194 ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV--N 251
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
L + +++ +C+ A +L +M + G PD++ + LL G G+ + L
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 227 QMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
M + P+ Y + L + EA++ EME+ + + D+ + A++ GF G
Sbjct: 312 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 287 NLD----------------------------EAKKWFGE-------IEKSENDPDKNTFA 311
+D E K+ F E + + E PD +
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA----KEIVEL 367
++ C+ G++K A+ + E+ G ++++ L S+ L EA KE+V
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Query: 368 G 368
G
Sbjct: 492 G 492
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 6/280 (2%)
Query: 40 NLRKLVDKFKKACDVDR--FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEG 97
N K+ D + D+ R F Y ++ L + + + ++Y +
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVV 358
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
L++ + K G + + D+M ++ + L++ ++ A+ + + + +++
Sbjct: 359 TYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+I PD+ YN VI+ CK + AV + EME+NG+SP + TF +++GL ++G
Sbjct: 419 R-QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGC 477
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV--EKKTGEAVEFLQEMEKKDV-KPDLFS 274
E + +M + L + +LL V +KK A + + K + ++ S
Sbjct: 478 LLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLS 537
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
I ++G EA + E+ + + P +TFA L+
Sbjct: 538 WTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLM 577
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 12/262 (4%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCT--RTVLSFNALLAAYLHSKQYRVVERIFKEV 157
+L+ Y M K A + ++E N + +++N +L A + ++ ++F V
Sbjct: 277 GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAV 336
Query: 158 ------PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
P ++V +L ++N ++ +C FE A+ + +M SPD ++FN L++
Sbjct: 337 KKEHNPPRHLAV--NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQ 394
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L E EKL+G+M KN+ PD +Y + E K E + + M + +++P+
Sbjct: 395 LCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
L N + + G LD+AK +F ++ S+ D + ++ L E G L + +V
Sbjct: 455 LAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVD 513
Query: 332 EIF-NTRCRVGAPLLQLVVDKL 352
E+ + RV L + V ++L
Sbjct: 514 EMLDDDTVRVSEELQEFVKEEL 535
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 123/284 (43%), Gaps = 46/284 (16%)
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFES 185
NC T+ + N +LAA L +Y + ++ + + + P++++YN + +A+ + E
Sbjct: 125 NCRPTIFTVNTVLAAQLRQAKYGALLQLHGFI-NQAGIAPNIITYNLIFQAYLDVRKPEI 183
Query: 186 AVSMLEEMEKNG-VSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
A+ + N ++P + TF L+ GL + E+ ++ M K D Y+ +
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 245 LGLA--------------VEKKTGEAVE------------FLQEMEKK------------ 266
+G +++K G V+ F++EMEK+
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 267 -DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP-----DKNTFATLVPFLCEK 320
V+ + N +++ G DEA K F ++K N P + TF +V C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
G + A++V +++ + +C ++++L +L+EA+++
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKL 407
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEM--EKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
D V Y ++K + ++ + A+ EE E + V + +N +L+ L G+F+E K
Sbjct: 272 DGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALK 331
Query: 224 LWGQM-----GGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
L+ + ++L+ ++ ++N + G K EA+E ++M PD S N +
Sbjct: 332 LFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ + L EA+K +GE+E+ PD+ T+ L+ ++G + K + +
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
R + + D+L+ L +AK ++
Sbjct: 452 RPNLAVYNRLQDQLIKAGKLDDAKSFFDM 480
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 48/324 (14%)
Query: 48 FKKACDVDRFRTKTGI------YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSAR 101
+++A ++ R +GI Y +R A A + + + + DFS F
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH-FDNS 325
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L++LY K G AR +F++MP ++ ++S+NALL+ Y+ S + IFKE+
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKD----LVSWNALLSGYVSSGHIGEAKLIFKEMK--- 378
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ +++S+ +I ++ E + + M++ G P F+ + G + G
Sbjct: 379 --EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 222 EKLWGQM----------GGKNL---------------------SPDIRSYNARLLGLAVE 250
++ Q+ G L D S+NA + L
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNT 309
EAV+ +EM KK ++PD +L ++ + G +D+ +K+F +E P +
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+A L+ LC G A V++ +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESL 580
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 87 QKQYSDFSKEGFSARL------ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
Q+ ++ K GF + L IT+Y K G+ + ARQ+F MP C
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP---CL------------ 481
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
D VS+N +I A + AV + EEM K G+ P
Sbjct: 482 -------------------------DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRP 516
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
D IT T+L G ++G K + M P + ARL+ L ++G+ +
Sbjct: 517 DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC--RSGKFSDAE 574
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLD----EAKKWFGEIEKSEN 303
+E KP A++ G GN++ A K FG I + +
Sbjct: 575 SVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 99 SARLITLYGKSG----MPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF 154
S L+++Y K + AR++FDE+ E++ S+ ++ Y+ + + + E +
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKD----ERSWTTMMTGYVKNGYFDLGEELL 242
Query: 155 KEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYA 214
+ + + LV+YN +I + ++ A+ M+ M +G+ D T+ +++
Sbjct: 243 EGMDDNMK----LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 215 EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
G + G+ Q+ L + S++ +++ K G+ E EK K DL S
Sbjct: 299 AGLLQLGK----QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVS 353
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEK 300
NA++ G+V+ G++ EAK F E+++
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM- 193
N+L++ Y ++ IF+++P + DLVS+N ++ + S A + +EM
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAK-----DLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
EKN ++++ ++ GL G EEG KL+ M + P +++ + AV
Sbjct: 379 EKN-----ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
++ ++ K L + NA+I + G ++EA++ F ++ D ++ L
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF----RTMPCLDSVSWNAL 489
Query: 314 VPFLCEKGDLKTAIDVVKEIF 334
+ L + G A+DV +E+
Sbjct: 490 IAALGQHGHGAEAVDVYEEML 510
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
RLI +Y KS ARQ+FDE+ E + ++ +++ Y S + +F++ P
Sbjct: 54 RLIDVYCKSSELNYARQLFDEISEPD----KIARTTMVSGYCASGDITLARGVFEKAP-- 107
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
D V YN +I F + SA+++ +M+ G PD TF ++L GL E+
Sbjct: 108 -VCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEK 166
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK---KDVKPDLFSLNA 277
+ K+ + I S + L ++V K + L K + ++ D S
Sbjct: 167 QCVQFHAAALKSGAGYITSVSNAL--VSVYSKCASSPSLLHSARKVFDEILEKDERSWTT 224
Query: 278 IIKGFVNEGNLDEAKKWFGE--IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
++ G+V G D GE +E +++ + ++ +G + A+++V+ + +
Sbjct: 225 MMTGYVKNGYFD-----LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ + V+ + +L K++
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQV 308
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 123/289 (42%), Gaps = 59/289 (20%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
+I YGK ++AR++F+ MP + V +++ +L Y+++++ + F+++P
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKN 207
Query: 159 --------------GEIS---------VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
G++ DLV +NT+I + ++ + A+ M+
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG 267
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL---------------------- 233
G PD +T +++L GR + G ++ + + +
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 234 ------SPDIRSY---NARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
S +RS N+ + LA+ K EA+E ME D+KPD + A++ V+
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G L E K F E++ + P+ F L+ L G LK A +VKE+
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 34/260 (13%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ LI++YGK G AR++FDEMPERN V ++NA++ Y+ + + +F+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERN----VATWNAMIGGYMSNGDAVLASGLFE---- 136
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME---KNGVSPDLITFNTLLDGLYAEG 216
EISV + V++ +IK + K E A + E M KN + +++ G+Y
Sbjct: 137 EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN------VKAWSVMLGVYVNN 190
Query: 217 R-FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEK--KTGEAVEFLQEMEKKDVKPDLF 273
R E+ K + DI NA + L + + G+ E + + + DL
Sbjct: 191 RKMEDARKFF---------EDIPEKNAFVWSLMMSGYFRIGDVHE-ARAIFYRVFARDLV 240
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N +I G+ G D+A F ++ +PD T ++++ + G L DV +E+
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRL----DVGREV 296
Query: 334 FNTRCRVGAPLLQLVVDKLV 353
+ G L Q V + L+
Sbjct: 297 HSLINHRGIELNQFVSNALI 316
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 1/216 (0%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
S LI + G A +F M V+++N L+ Y + Q V + E+
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
+ PD+ +YN +I + + A ++ E+ + G P + F ++ G G F
Sbjct: 506 SA-GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+E LW M + PD+ + +A L G ++ +A+ ++ +KPD+ N +
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
I G+ + G++++A + G + + P+++T LV
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y G +A Q F + + ++ + L+ A E +F+ + E
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE- 472
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+K D+V+YN ++ + K+ +++EM G+SPD+ T+N L+ + G +E
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ ++ + P ++ + G + EA M +KPD+ + +A++ G
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ +++A F ++ + PD + TL+ C GD++ A +++
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 4/221 (1%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ K G P+ A ++ R + +++ L+ + IF+E+ E+ + P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRP---NIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLP 406
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V Y T+I +C + A + K+G P L T L+ G + E ++
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M + L D+ +YN + G + + E + EM + PD+ + N +I V
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G +DEA + E+ + P F ++ ++GD + A
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++PD+V++ I CK+ + A S+L +++ G+S D ++ ++++DG G+ EE
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
KL + L P+I Y++ L + A QE+ + + PD +I G+
Sbjct: 362 KL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N G D+A ++FG + KS N P T L+ G + A V + +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER-IFKEVPGEISVKPDLV 168
G A ++ E+ R + L+F ++ + SK+ E I ++ +KPD+V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGF--SKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+ + ++ +CK++ E A+ + ++ G+ PD++ +NTL+ G + G E+ +L G M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 229 GGKNLSPDIRSYNARLLGL 247
+ + P+ +++A +LGL
Sbjct: 645 VQRGMLPNESTHHALVLGL 663
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI---S 162
YGK+ + ++ DEM + V ++N L+ HS R E+ E+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILI----HSMVVRGYIDEANEIISELIRRG 543
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
P +++ VI F K F+ A + M + PD++T + LL G R E+
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAI 603
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG- 281
L+ ++ L PD+ YN + G +A E + M ++ + P+ + +A++ G
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Query: 282 ----FVNE 285
FVN
Sbjct: 664 EGKRFVNS 671
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 1/216 (0%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
S LI + G A +F M V+++N L+ Y + Q V + E+
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
+ PD+ +YN +I + + A ++ E+ + G P + F ++ G G F
Sbjct: 506 SA-GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+E LW M + PD+ + +A L G ++ +A+ ++ +KPD+ N +
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
I G+ + G++++A + G + + P+++T LV
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y G +A Q F + + ++ + L+ A E +F+ + E
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE- 472
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+K D+V+YN ++ + K+ +++EM G+SPD+ T+N L+ + G +E
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ ++ + P ++ + G + EA M +KPD+ + +A++ G
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV 330
+ +++A F ++ + PD + TL+ C GD++ A +++
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 4/221 (1%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ K G P+ A ++ R + +++ L+ + IF+E+ E+ + P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRP---NIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLP 406
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V Y T+I +C + A + K+G P L T L+ G + E ++
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M + L D+ +YN + G + + E + EM + PD+ + N +I V
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
G +DEA + E+ + P F ++ ++GD + A
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
++PD+V++ I CK+ + A S+L +++ G+S D ++ ++++DG G+ EE
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
KL + L P+I Y++ L + A QE+ + + PD +I G+
Sbjct: 362 KL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
N G D+A ++FG + KS N P T L+ G + A V + +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER-IFKEVPGEISVKPDLV 168
G A ++ E+ R + L+F ++ + SK+ E I ++ +KPD+V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGF--SKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 169 SYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM 228
+ + ++ +CK++ E A+ + ++ G+ PD++ +NTL+ G + G E+ +L G M
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 229 GGKNLSPDIRSYNARLLGL 247
+ + P+ +++A +LGL
Sbjct: 645 VQRGMLPNESTHHALVLGL 663
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI---S 162
YGK+ + ++ DEM + V ++N L+ HS R E+ E+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILI----HSMVVRGYIDEANEIISELIRRG 543
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
P +++ VI F K F+ A + M + PD++T + LL G R E+
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAI 603
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG- 281
L+ ++ L PD+ YN + G +A E + M ++ + P+ + +A++ G
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Query: 282 ----FVNE 285
FVN
Sbjct: 664 EGKRFVNS 671
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 129/276 (46%), Gaps = 4/276 (1%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFDEM 122
Y + + +QF +++ K + + S E F+ LI Y ++G+ A F+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI-LIRRYVRAGLASEAVHCFNRM 212
Query: 123 PERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKV 182
+ C ++F+ +++ ++ + F + +PD++ Y +++ +C++
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGE 270
Query: 183 FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA 242
A + +EM+ G+ P++ T++ ++D L G+ ++ M +P+ ++N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+ +T + ++ +M+K +PD + N +I+ + NL+ A K + K +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRC 338
+ + +TF T+ ++ +K D+ A + ++ +C
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ + ++G A ++F EM V +++ ++ A Q +F ++ +
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM-LDS 319
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
P+ +++N +++ K+ E + + +M+K G PD IT+N L++ + E
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K+ M K + ++N + ++ A +M + +P+ + N +++
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
FV + D K E++ E +P+ NT+ LV C G A + KE+ +C
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 342 A-PLLQLVVDKLVSESMLSEAKEIVE 366
+ L ++V+ +L L + +E+VE
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVE 525
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YN +I K + F+ A +++ M+ V + TF L+ G E + +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
PD +++ + L+ +++ EA F + K +PD+ +++G+ G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA 342
EA+K F E++ + +P+ T++ ++ LC G + A DV ++ ++ C A
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 25/284 (8%)
Query: 75 KQFRGVIDILEHQKQYS------DFSKE---GFSARLITLYGKSGMPKRARQMFDEMPER 125
KQFR VID+L++ K+ + D E + R +T K KR R PE
Sbjct: 177 KQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQK--FAKRKRIRVKTQPEI 234
Query: 126 NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFES 185
N +FN LL A + E + + + VKPD ++N + +C+ + +
Sbjct: 235 N------AFNMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPKK 286
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM---GGKNLSPDIRSYNA 242
A+ +LEEM + G P+ T+ +D G +E L+ M G +P +++
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 243 RLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
++ LA K E E + M PD+ + +I+G +DEA K+ E+
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ 346
PD T+ + LCE A+ + + +RC AP +Q
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC---APSVQ 447
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEM-----PERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
L+ K G+ K + M P+ N +FN L + + + ++ +E
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRHRVKPDAN------TFNVLFFGWCRVRDPKKAMKLLEE 293
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS---PDLITFNTLLDGLY 213
+ E KP+ +Y I FC++ + + A + + M G + P TF ++ L
Sbjct: 294 MI-EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALA 352
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+ EE +L G+M PD+ +Y + G+ + +K EA +FL EM K PD+
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ N ++ DEA K +G + +S P T+ L+ E D A + E+
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 334 FNTRC 338
C
Sbjct: 473 DKRDC 477
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV--PGEISVKPDLVS 169
PK+A ++ +EM E ++ A + + + +F + G P +
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
+ +I A K+ E ++ M G PD+ T+ +++G+ + +E K +M
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
K PDI +YN L L +KT EA++ M + P + + N +I F + D
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
A + E++K + D T+ ++ L + K A +++E+ N
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVN 509
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
P++ FN LLD L G +EGE L +M + + PD ++N G + +A++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFG-EIEKSE--NDPDKNTFATLVPF 316
L+EM + KP+ F+ A I F G +DEA F I K + P TFA ++
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 317 LCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
L + + +++ + +T C + V++ + + EA + ++ Y P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
PD+V+YN ++ C+++ + A+ + M ++ +P + T+N L+ + +
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
W +M ++ D+ +Y A + GL + EA L+E+ K +K ++ +
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSE 528
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFA 311
GNL K ++K N FA
Sbjct: 529 VGNLKAIHKVSEHMKKFYNHSMARRFA 555
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 132/325 (40%), Gaps = 42/325 (12%)
Query: 77 FRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNA 136
FR +ID L + +F+ LI K G K+A +M +EM V + A
Sbjct: 275 FRKMID-LGFKPNLINFTS------LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 137 LLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN 196
L+ R+F ++ + KP++ +Y ++I +CK A + M++
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEA 256
G+ P++ T+ TL++G G F +L MG + P+I +YNA + L + + EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 257 VEFLQE-----------------------------------MEKKDVKPDLFSLNAIIKG 281
E L + M K + D+ N +I
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
F + + E+++ F + P K T+ +++ C++GD+ A+ + C
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 342 APLLQLVVDKLVSESMLSEAKEIVE 366
+ ++ L +SM+ EA ++ E
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYE 592
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
AV M+ +M+ G++P IT N +L+ G E E ++ +M + + PD SY ++
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
G + K EA +L M ++ PD + I+ G ++ A +F ++ P
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA-KEI 364
+ F +L+ LC+KG +K A ++++E+ + ++D L +A +
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 365 VELGKTNRYHP 375
++L +++ Y P
Sbjct: 346 LKLVRSDTYKP 356
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQ----YRVVERIFKEV 157
LI + K+G RA ++ + M + + ++NA + + + Y ++ + F
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF--- 455
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
++ D V+Y +I+ CK A++ M K G D+ N L+ + +
Sbjct: 456 --SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+E E+L+ + L P +Y + + E A+++ M++ PD F+ +
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+I G + +DEA K + + P + T TL C++ D A+ +++ +
Sbjct: 574 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 77/159 (48%)
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+ P ++ N V++ + + E A ++ +EM GV PD ++ ++ G + +G+ +E +
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ M + PD + L L A+ + ++M KP+L + ++I G
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
+G++ +A + E+ ++ P+ T L+ LC++G
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 17/253 (6%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ + G A M +M + T + ++ N +L + E +F E+ V P
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR-GVVP 215
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D SY ++ + + A L M + G PD T +L L G +
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M P++ ++ + + GL + +A E L+EM + KP++++ A+I G
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 286 GNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTA---------------IDV 329
G ++A + F ++ +S+ P+ +T+ +++ C++ L A ++
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 330 VKEIFNTRCRVGA 342
+ N C+ G+
Sbjct: 396 YTTLINGHCKAGS 408
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 14/298 (4%)
Query: 61 TGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITL------YGKSGMPKR 114
G Y +R L K F ++D+L+ EG + L L + + +R
Sbjct: 151 VGSYSVILRALGRRKLFSFMMDVLK------GMVCEGVNPDLECLTIAMDSFVRVHYVRR 204
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F+E + SFNALL + +F G I D SYN +I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF--DSCSYNIMI 262
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ K E +L+EM ++G PD ++++ L++GL GR + +++ + K
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
PD YNA + + E++ + + M ++ +P+L + + ++ G + + +A +
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
F E+ P + + LC G A+ + ++ CR+ +L++ +L
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 133/303 (43%), Gaps = 12/303 (3%)
Query: 78 RGVIDILEHQKQYS-DFSKEGFSARLITLYGKSGMPKRARQMFD----EMPERNCTRTVL 132
R I++ E + + S E F+A L L +S + A+ +F+ +P +C
Sbjct: 203 RRAIELFEESESFGVKCSTESFNALLRCLCERSHVSA-AKSVFNAKKGNIPFDSC----- 256
Query: 133 SFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEE 192
S+N +++ + + +E++ KE+ E PD +SY+ +I+ ++ +V + +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMV-ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
++ G PD +N ++ + F+E + + +M + P++ +Y+ + GL +K
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+A+E +EM + V P + + +K + G A + + K+ ++ +
Sbjct: 376 VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL 435
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNR 372
L+ L G ++V E+ + + + +VD L L A ++E
Sbjct: 436 LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Query: 373 YHP 375
+ P
Sbjct: 496 FCP 498
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 36/242 (14%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL----------------- 202
E V D+ SY+ +++A + K+F + +L+ M GV+PDL
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 203 ------------------ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
+FN LL L + ++ G N+ D SYN +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMI 262
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
G + + E + L+EM + PD S + +I+G G ++++ + F I+ N
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
PD N + ++ D ++ + + + C +V L+ +S+A EI
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 365 VE 366
E
Sbjct: 383 FE 384
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI LY K AR +F+ +P RT++S+ A+++AY + + IF ++ ++
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPE--RTIVSWTAIVSAYAQNGEPMEALEIFSQMR-KM 216
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG--VSPDL-ITFNTLLDGLYAE-GR 217
VKPD V+ +V+ AF + + S+ + K G + PDL I+ NT+ YA+ G+
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM----YAKCGQ 272
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+ L+ +M SP++ +NA + G A EA++ EM KDV+PD S+ +
Sbjct: 273 VATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
I G+L++A+ + + +S+ D + L+ + G ++ A
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L T+Y K G A+ +FD+M N ++ +NA+++ Y + R +F E+ +
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPN----LILWNAMISGYAKNGYAREAIDMFHEMINK- 317
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
V+PD +S + I A + E A SM E + ++ D+ + L+D ++A+ EG
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID-MFAKCGSVEG 376
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+L + + L D+ ++A ++G + + EA+ + ME+ V P+ + ++
Sbjct: 377 ARL---VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ G + E +F + + +P + +A ++ L G L A +V+K
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 38/208 (18%)
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG 211
++F ++P +P + +N +I+ + ++ F+ A+ M M+ VSPD TF LL
Sbjct: 74 QVFDDLP-----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPD---------------------------------IR 238
+ G + Q+ D I
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 239 SYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI 298
S+ A + A + EA+E +M K DVKPD +L +++ F +L + + +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 299 EKSENDPDKNTFATLVPFLCEKGDLKTA 326
K + + + +L + G + TA
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATA 276
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
+L+ Q ++ + L++ Y K+G AR +F+ MPERN +++ NA+L Y+
Sbjct: 64 LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERN----IVTCNAMLTGYV 119
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
++ +F+E+P ++VS+ ++ A C E AV + +EM + V
Sbjct: 120 KCRRMNEAWTLFREMP------KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV---- 169
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
+++NTL+ GL G E+ ++++ M S D+ S+NA + G EA +
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFA 311
M +K+V + +++ G+ G++ EA + F E+ P++N +
Sbjct: 226 MSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEM------PERNIVS 264
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 121/267 (45%), Gaps = 15/267 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y K+G +RA +F+ + +S+ +++ YL + +F+++ +
Sbjct: 374 IINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK- 429
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
D V++ +I ++++F A S+L +M + G+ P T++ LL A ++G
Sbjct: 430 ----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 222 EKLWGQMGGKNLS--PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ + + PD+ N+ + ++ K G A+E E+ K V+ D S N++I
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLV---SMYAKCG-AIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT-RC 338
G + G D+A F E+ S P+ TF ++ G + +++ K + T
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 339 RVGAPLLQLVVDKLVSESMLSEAKEIV 365
+ G ++D L L EA+E +
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFI 628
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
+ + + ++S S G +I+ Y ++G + AR++FDEMPER+ ++S+N ++
Sbjct: 83 ALRVFKRMPRWSSVSYNG----MISGYLRNGEFELARKLFDEMPERD----LVSWNVMIK 134
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGV 198
Y+ ++ +F+ +P + D+ S+NT++ + ++ + A S+ + M EKN V
Sbjct: 135 GYVRNRNLGKARELFEIMP-----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV 189
Query: 199 SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
S +N LL + EE L+ +N + + S+N L G +KK EA +
Sbjct: 190 S-----WNALLSAYVQNSKMEEACMLFKSR--ENWA--LVSWNCLLGGFVKKKKIVEARQ 240
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
F M +DV S N II G+ G +DEA++ F E
Sbjct: 241 FFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 131/294 (44%), Gaps = 70/294 (23%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
+++ Y ++ M + AR++FD+MPERN +S+NA+LA Y+ ++ + + +F +P
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 159 --------------GEIS---------VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
G+IS K D VS+ +I + +S A+ + +ME+
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 196 NGVSPDLITFNT--------------------LLDGLYAEGRF---------------EE 220
G + +F++ L+ G Y G F EE
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
L+ +M GK DI S+N + G + A+ F + M+++ +KPD ++ A++
Sbjct: 463 ANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 281 GFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G +D+ +++F + + P+ +A +V L G L+ A +++K +
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y +SG ARQ+FDE P + V ++ A+++ Y+ ++ +F ++P
Sbjct: 256 IITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEARELFDKMP--- 308
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ + VS+N ++ + + + E A + + M VS T+NT++ G G+ E
Sbjct: 309 --ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEA 362
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ L+ +M + D S+ A + G + + EA+ +ME++ + + S ++ +
Sbjct: 363 KNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ K+ G + K + L+ C+ G ++ A D+ KE+
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 89 QYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
Y+D +K S L+ KSG ARQMFD+MPER+ ++N ++ AY +S++
Sbjct: 22 SYADRTKL-HSNLLLGDLSKSGRVDEARQMFDKMPERD----EFTWNTMIVAYSNSRRLS 76
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
E++F+ P VK + +S+N +I +CKS A ++ EM+ +G+ P+ T ++
Sbjct: 77 DAEKLFRSNP----VK-NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 209 LDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDV 268
L + GE++ G D+ N L A K+ EA + ME
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG--- 188
Query: 269 KPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
+ + + +++ G+ G +A + F ++ + N ++ TF +++ + +
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 329 V----VKEIFNTRCRVGAPLLQL 347
V VK F T V + L+ +
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDM 271
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 153 IFKEVPGEISV-----KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+FKE+ SV PD+ +YN++I C + A+ + +E++ +G PD T+
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L+ G R ++ +++G+M PD YN L G +K EA + ++M ++
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
V+ ++ N +I G G + F +++K D TF+ + LC +G L+ A+
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 328 DVVKEI 333
+V+E+
Sbjct: 450 KLVEEM 455
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 13/268 (4%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLIT--- 104
F+K + RF+ T Y + + + + K+ S F + T
Sbjct: 235 FEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNS 294
Query: 105 ------LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
L+GK+ K A ++DE+ ++ L+ S + RI+ E+
Sbjct: 295 LIHVLCLFGKA---KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
V PD + YN ++ K++ A + E+M + GV T+N L+DGL+ GR
Sbjct: 352 YNGFV-PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E G L+ + K D +++ L L E K AV+ ++EME + DL +++++
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPD 306
+ GF +G D +K I + P+
Sbjct: 471 LIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
N L+ YL + ++F+ G +YN+++ +F K F++A +L++M
Sbjct: 597 MNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQM 656
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
+N + D+ T+N ++ GL GR + + ++ + DI YN + L +
Sbjct: 657 FENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
EA + M+ + PD+ S N +I+ G L EA K+
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--GEISVKPDLVSYNT 172
A Q+F++M + + ++N L+ + + +F ++ G+ D ++++
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV---DAITFSI 434
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
V C+ E AV ++EEME G S DL+T ++LL G + +GR++ EKL + N
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGN 494
Query: 233 LSPDIRSYNA 242
L P++ +NA
Sbjct: 495 LVPNVLRWNA 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
T ++N+++++++ ++ + ++ E D+ +YN +I+ K + A ++
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQM-FENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
L+ + K G D++ +NTL++ L R +E +L+ M ++PD+ SYN + +
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 250 EKKTGEAVEFLQEMEKKDVKPD 271
K EA ++L+ M P+
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPN 769
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYR------VVERIFK 155
+++ + K G + AR + D+M E C + ++N ++ K R V++R+ K
Sbjct: 636 MMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGL--GKMGRADLASAVLDRLTK 693
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
+ G + D+V YNT+I A K+ + A + + M+ NG++PD++++NT+++
Sbjct: 694 Q-GGYL----DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 216 GRFEEGEK 223
G+ +E K
Sbjct: 749 GKLKEAYK 756
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 6/183 (3%)
Query: 161 ISVKPDLVS---YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI--TFNTLLDGLYAE 215
+ KPD NT + + A + E GV+ DL T+N+++ +
Sbjct: 585 VEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT-DLTSYTYNSMMSSFVKK 643
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G F+ + QM + DI +YN + GL + A L + K+ D+
Sbjct: 644 GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
N +I LDEA + F ++ + +PD ++ T++ + G LK A +K + +
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 336 TRC 338
C
Sbjct: 764 AGC 766
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 48/329 (14%)
Query: 40 NLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFS 99
N R L F+ C + ++ ++ T L G G ++ +K + + +
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTT--LIGMYGGCGCVEFA--RKVFDEMHQPNLV 173
Query: 100 A--RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
A +IT + AR++FD+M RN T S+N +LA Y+ + + +RIF E+
Sbjct: 174 AWNAVITACFRGNDVAGAREIFDKMLVRNHT----SWNVMLAGYIKAGELESAKRIFSEM 229
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
P D VS++T+I + F + E+++ G+SP+ ++ +L G
Sbjct: 230 P-----HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 218 FEEGEKLWGQMGGKNLS-------------------PDIR-------------SYNARLL 245
FE G+ L G + S P R S+ + +
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-D 304
GLA+ + EAV EM V PD S +++ + G ++E + +F E+++ + +
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
P+ + +V G L+ A D + ++
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQM 433
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 47/214 (21%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +Y + G AR +F+ M E+ C
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRC---------------------------------- 335
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+VS+ ++I E AV + EM GV+PD I+F +LL G EEG
Sbjct: 336 -----IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG 390
Query: 222 EKLWGQMGG-KNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
E + +M ++ P+I Y + K +A +F+ +M + P ++
Sbjct: 391 EDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP---IPPTAIVWRTLLG 447
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ GN++ A+ ++++ N+ D N LV
Sbjct: 448 ACSSHGNIELAE----QVKQRLNELDPNNSGDLV 477
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%)
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S+ P ++YN++I FCK + A ML+ M G SPD++TF+TL++G R + G
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ +M + + + +Y + G A + L EM V PD + + ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 282 FVNEGNLDEAKKWFGEIEKSEN 303
++ L +A +++KSE+
Sbjct: 125 LCSKKELRKAFAILEDLQKSED 146
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 72/141 (51%)
Query: 193 MEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKK 252
M + + P IT+N+++DG + R ++ +++ M K SPD+ +++ + G K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+E EM ++ + + + +I GF G+LD A+ E+ PD TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 313 LVPFLCEKGDLKTAIDVVKEI 333
++ LC K +L+ A +++++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K A++M D M + C+ V++F+ L+ Y +K+ IF E+
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR- 74
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
+ + V+Y T+I FC+ ++A +L EM GV+PD ITF+ +L GL ++
Sbjct: 75 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
P +YN+ + G + + +A L M K PD+ + + +I G+ +D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVS 354
F E+ + + T+ TL+ C+ GDL A D++ E+ + ++ L S
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 355 ESMLSEAKEIVE-LGKTNRYH 374
+ L +A I+E L K+ +H
Sbjct: 128 KKELRKAFAILEDLQKSEDHH 148
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 120/236 (50%), Gaps = 12/236 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPER-NCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
+I YGK+GM + + +M E + V + N+++ +Y + + R +E +
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ-L 314
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ V+PD+ ++N +I +F K+ +++ S+++ MEK S +T+N +++ GR E+
Sbjct: 315 MGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF---LQEMEKKDVKPDLFSLNA 277
+ ++ +M + + P+ +Y + + + K G V+ L+++ DV D N
Sbjct: 375 MDDVFRKMKYQGVKPNSITYCSLVNAYS---KAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
II + G+L K+ + ++E+ + PDK TFAT++ G D V+E+
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG----IFDAVQEL 483
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 130/324 (40%), Gaps = 44/324 (13%)
Query: 80 VIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
+ ++L Q Y K +L + G P +A +F+ M T+ + +L++
Sbjct: 130 IFNLLRKQHWYEPRCKT--YTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIS 187
Query: 140 AYLHSKQYRVVERIFKEVPGEISV---KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN 196
Y S+ ++++ F + SV KPD+ ++ +I CK F+ S++ EM
Sbjct: 188 VYGKSE---LLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 197 GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM---------------------GGKNL-- 233
GV +T+NT++DG G FEE E + M G+N+
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 234 -------------SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
PDI ++N +L + + MEK+ + N +I+
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
F G +++ F +++ P+ T+ +LV + G + V+++I N+ +
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 424
Query: 341 GAPLLQLVVDKLVSESMLSEAKEI 364
P +++ L+ KE+
Sbjct: 425 DTPFFNCIINAYGQAGDLATMKEL 448
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 51/302 (16%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
L+ +Y K+G K A Q+F+E P+R ++L +N L+ Y +K + +F+ +P
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 159 --------------GEIS-------VKP--DLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
GE++ + P ++VS+ T+I F ++ +E+A+S EM +
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV---EKK 252
G+ P+ T +L G G ++ G + + D R +G A+ K
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD------RAIGTALVDMYAK 340
Query: 253 TGE---AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
GE A M KD+ S A+I+G+ G +A + F ++ S PD+
Sbjct: 341 CGELDCAATVFSNMNHKDI----LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA--PLLQ---LVVDKLVSESMLSEAKEI 364
F ++ + +D+ F++ A P L+ LVVD L L+EA E+
Sbjct: 397 FLAVLTACLNSSE----VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Query: 365 VE 366
VE
Sbjct: 453 VE 454
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 12/239 (5%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
G + LI Y SG RA+Q+F+ MPE+N V+S+ L+ + + Y + E
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKN----VVSWTTLINGFSQTGDYETAISTYFE 283
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE- 215
+ E +KP+ + V+ A KS S + + + NG+ D L+D +YA+
Sbjct: 284 ML-EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD-MYAKC 341
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G + ++ M K DI S+ A + G AV + +A++ ++M KPD
Sbjct: 342 GELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
A++ +N +D +F + +P + +V L G L A ++V+ +
Sbjct: 398 LAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 101 RLITLYGKSGMPKRARQMF----DEMPERNCTR---TVLSFNALLAAYLHSKQYRVVERI 153
LI L GK+ A +++ DE PE N V FN LL+A +R R+
Sbjct: 386 HLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRL 445
Query: 154 FKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
++ + +KP +N V+ A K+ +A+ + + M NG P +I++ LL L
Sbjct: 446 LNKMEDK-GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
++E ++W M + P++ +Y L ++K L+EM K ++P +
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVV 564
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
+ NA+I G G A +WF ++ +P++ T+ L+ L + A ++
Sbjct: 565 TFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A Q+F M + TV+S+ ALL+A K Y R++ + ++ ++P+L +Y T+
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI-KVGIEPNLYAYTTMA 535
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
+ F ++L+EM G+ P ++TFN ++ G G + + +M +N+
Sbjct: 536 SVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVE 595
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
P+ +Y + LA + K A E + + + +K +A++K
Sbjct: 596 PNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 137 LLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM--- 193
L+ A + Y V + ++K + S + L N +I K+K + +A+ + E++
Sbjct: 352 LIWACTREEHYIVGKELYKRIRERFS-EISLSVCNHLIWLMGKAKKWWAALEIYEDLLDE 410
Query: 194 --EKNGVSPDLIT--FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
E N +S +L+ FN LL G + G +L +M K L P R +NA L+ +
Sbjct: 411 GPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSK 470
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+T A++ + M KP + S A++ DEA + + + K +P+
Sbjct: 471 ASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYA 530
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ T+ L + ++KE+
Sbjct: 531 YTTMASVLTGQQKFNLLDTLLKEM 554
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 128/311 (41%), Gaps = 39/311 (12%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
Y+ + A Q+R +++++ + + LI G SG + A ++ +M
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 240
Query: 124 ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI--------- 174
+ +++ N +L+AY +QY F+ + G V+PD ++N +I
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA-KVRPDTTTFNIIIYCLSKLGQS 299
Query: 175 -------------KAFCKSKV---------------FESAVSMLEEMEKNGVSPDLITFN 206
+A C+ V E+ ++ E M G+ P+++++N
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 207 TLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
L+ G + G + + PD+ SY L ++ G+A E M K+
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 267 DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
KP++ + NA+I + + G L EA + F ++E+ P+ + TL+ C + K
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA-ACSRSKKKVN 478
Query: 327 IDVVKEIFNTR 337
+D V +R
Sbjct: 479 VDTVLSAAQSR 489
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ LY G + R +F+ M ++S+NAL+ AY + ++ +
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK-QN 384
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ PD+VSY ++ ++ +S+ A + M K P+++T+N L+D + G E
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ QM + P++ S L + KK L + + + + + N+ I
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++N L++A + + K + D TF L+ C AI +KE+
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI YG +G A ++F +M + V+S LLAA SK+ V+ +
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 489
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG---------- 211
+ + +YN+ I ++ + E A+++ + M K V D +TF L+ G
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 212 -----------------LYA--------EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+Y+ +G+ E E ++ QM PD+ +Y + L
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEG 286
+K G+A E EME ++PD + +A+++ F N+G
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKG 648
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 136/285 (47%), Gaps = 14/285 (4%)
Query: 47 KFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLY 106
+++ + DRF+ + E V RL ++ V +L F+++ F LI
Sbjct: 62 RYRIRVENDRFQKDWSVSE-VVDRLMALNRWEEVDGVL--NSWVGRFARKNFPV-LIREL 117
Query: 107 GKSGMPKRARQMFDEMP-ERN-CTRTVLSFNALLAAYLHSKQYRV--VERIFKEVPGEIS 162
+ G + +F M ++N C R + +N ++ LH++ V +F E+ + S
Sbjct: 118 SRRGCIELCVNVFKWMKIQKNYCARNDI-YNMMIR--LHARHNWVDQARGLFFEMQ-KWS 173
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
KPD +Y+ +I A ++ + A++++++M + ++P T+N L++ + G + E
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
++ +M + PD+ ++N L ++ +A+ + + M+ V+PD + N II
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 283 VNEGNLDEAKKWFGEI--EKSENDPDKNTFATLVPFLCEKGDLKT 325
G +A F + +++E PD TF +++ KG+++
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ YG+S P +A+++F M + V+++NAL+ AY + IF+++ +
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD- 454
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+KP++VS T++ A +SK + ++L + G++ + +N+ + E+
Sbjct: 455 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ M K + D ++ + G K EA+ +L+EME + ++++
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 574
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ +G + EA+ F +++ + +PD + +++
Sbjct: 575 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YN +I+ + + A + EM+K PD T++ L++ G++ L M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
++P +YN + EA+E ++M V PDL + N ++ + +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR--CR 339
+A +F ++ ++ PD TF ++ L + G A+D+ + R CR
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 125/259 (48%), Gaps = 8/259 (3%)
Query: 75 KQFRGVIDILEHQKQYSDFSKEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCT 128
K FR D+ + +K + + + G +I+ ++G+PKRA + F++M C
Sbjct: 183 KVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCE 242
Query: 129 RTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVS 188
++ A++ AY + + ++ E + D V+++T+I+ + S ++ ++
Sbjct: 243 PDNVTMAAMIDAYGRAGNVDMALSLYDRARTE-KWRIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 189 MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLA 248
+ EEM+ GV P+L+ +N L+D + R + + ++ + +P+ +Y A +
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 249 VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDK 307
+ +A+ +EM++K + + N ++ + +DEA + F +++ E DPD
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDS 421
Query: 308 NTFATLVPFLCEKGDLKTA 326
TF++L+ G + A
Sbjct: 422 WTFSSLITVYACSGRVSEA 440
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 90 YSDFSKEGFS------ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
Y D GF+ A L+ YG++ A ++ EM E+ + TV+ +N LL+
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF-CKSKVFESAVSMLEEMEKNGVSPDL 202
++ IF+++ + PD +++++I + C +V E+ ++L +M + G P L
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL-QMREAGFEPTL 456
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
+++ + ++ + + Q+ ++PD R + LL + + + E + +
Sbjct: 457 FVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDR-FCGCLLNVMTQTPSEEIGKLIGC 515
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
+EK K L ++K V E N +E
Sbjct: 516 VEKAKPK-----LGQVVKMLVEEQNCEEG 539
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
A+LI+ + + G ++ M N ++ + ++ +K+ IFK +
Sbjct: 252 AKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKD 311
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+ PD V Y T+I+ FC+ SA + EM K G+ P+ +N ++ G + G
Sbjct: 312 K-GYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E + +M + S N + G K+ EA E + M + V P+ + NA+I
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALI 430
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
KGF E +++ K + E++ P +A LV L + T++++
Sbjct: 431 KGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + Y +IK C +K A + + ++ G +PD + + T++ G +G KL
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
W +M K + P+ +YN + G + F EM + + S N +IKGF +
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G DEA + F + ++ P+ T+ L+ C++ ++ + + KE+
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 107/244 (43%), Gaps = 7/244 (2%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G+ + A ++++ + + + +V++ N++L L +++ + KE+ + + D
Sbjct: 159 GLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM---VESEFDSER 215
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
+I+A C +L++ K G+ P + L+ G G + ++ M
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
N P + Y + GL + KK EA + ++ K PD +I+GF +G L
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
A+K + E+ K P++ + ++ ++G+ I +V+ +N R G L
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE----ISLVEAFYNEMLRNGYGGTMLSC 391
Query: 350 DKLV 353
+ ++
Sbjct: 392 NTMI 395
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERI--FKEVPGEISVKPDLVSYNT 172
A ++M CT S+N+++ Q ++E + + E+ PD+ +Y
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLF---QENIIEDLASLVNIIQELDFVPDVDTYLI 552
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
V+ CK ++A ++++ ME+ G+ P + +++++ L +GR E E+ + +M
Sbjct: 553 VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG 612
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAK 292
+ PD +Y + A + EA E ++E+ K ++P F+ +I GFV G +++
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGC 672
Query: 293 KWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
++ ++ + P+ + L+ +KGD K
Sbjct: 673 QYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 38/267 (14%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ +I GK G A + F +M E +++ ++ Y + + + +EV
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
++P +Y +I F K + E L++M ++G+SP+++ + L+ +G F+
Sbjct: 646 HF-LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGL----AVEKKTGEAVE-----FLQEM------- 263
L+G MG ++ D +Y L GL A +KK VE LQ +
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Query: 264 ---------------------EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
KK + P+L+ N II G+ G LDEA ++K
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Query: 303 NDPDKNTFATLVPFLCEKGDLKTAIDV 329
P+ T+ L+ E GD+++AID+
Sbjct: 825 IVPNLVTYTILMKSHIEAGDIESAIDL 851
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 156 EVPGEI--SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLY 213
EV G++ S+ P+L +NT+I +C + + A + LE M+K G+ P+L+T+ L+
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 214 AEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
G E L+ G N PD Y+ L GL K+ +A+ + EM+K + P+
Sbjct: 841 EAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
S +++ EA K ++ + P L+ LCE+ L+ A + +
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA----RAL 953
Query: 334 FNTRCRVGAPLLQ 346
F + G LL
Sbjct: 954 FAIMVQSGRSLLN 966
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D V Y ++K +CK A+ + M + D FNTL+ G G ++G ++
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE-FLQEMEKKDVKPDLFSLNAIIKGFVN 284
QM K + ++ +Y+ + E A+ F+ +D+ ++ +I GF
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPL 344
+G +D+A + + PD T+ L+ L + +LK A+ +++ I + C + P+
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV 450
Query: 345 L 345
+
Sbjct: 451 I 451
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 91/199 (45%)
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
V V A C + + +A+S +E+M G +P ++N+++ L+ E E+ L
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
+ + PD+ +Y + L + A + ME+ ++P + ++II +G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQL 347
+ EA++ F ++ +S PD+ + ++ G + A ++V+E+ R + +
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 348 VVDKLVSESMLSEAKEIVE 366
++ V M+ + + ++
Sbjct: 658 LISGFVKMGMMEKGCQYLD 676
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/296 (18%), Positives = 114/296 (38%), Gaps = 31/296 (10%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L + K G A +FD M + + L+ Y + R++ + E
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV-ER 301
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
S + D +NT+I F K + + M +M K GV ++ T++ ++ EG +
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 222 EKLW-GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+L+ G +++S ++ Y + G + +AV+ L M + PD + ++K
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK 421
Query: 281 GF----------------------VNE------GNLD-EAKKWFGEIEKSENDPDKNTFA 311
+N GN++ + + GEI + + + A
Sbjct: 422 MLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLA 481
Query: 312 TLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
+ LC + + A+ ++++ N C V+ L E+++ + +V +
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 73/158 (46%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E+ ++P + Y+++I + K A +M ++G+ PD I + +++ GR +
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E +L ++ L P +Y + G + ++L +M + + P++ A+I
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
F+ +G+ + FG + +++ D + TL+ L
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y ++ FCK A ++ + ME +G D + + L+ + +L+ +M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
++ D +N + G + +M KK V+ ++F+ + +I + EGN+D
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 290 EAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
A + F SE+ + + + L+ +KG + A+D++ + +
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLD 406
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
I+ H + S + L+ + + G A + + E+N + F LLAA
Sbjct: 57 IVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAG 116
Query: 143 HSKQYRVVERIFKEV---PGEISVKPD--------------------------------- 166
++ R+F+EV PG+ + D
Sbjct: 117 ELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYR 176
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWG 226
L+ N +I AF +++ + + +L+EM++ PD+IT+N++LD L G E +
Sbjct: 177 LIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLS 236
Query: 227 QMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M ++S +I +YN L G+ + + EM + ++PDL S A+I
Sbjct: 237 TMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRS 296
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
GN+ E+ + F E+++ + P + L+ L + GD ++A+ + E+ NT
Sbjct: 297 GNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNT 347
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
+ E+ E + ++ N ++ A+ ++Q V I KE+ E KPD+++YN+V+
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK-EWECKPDVITYNSVLDI 221
Query: 177 FCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP 235
++ + + +L M E VS ++IT+NT+L+G+ RF+ ++ +M + P
Sbjct: 222 LGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEP 281
Query: 236 DIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
D+ SY A + L E++ EM+++ ++P ++ A+I G+ A +
Sbjct: 282 DLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLS 341
Query: 296 GEIEKSEN 303
E++ + +
Sbjct: 342 DELKNTSS 349
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
Query: 93 FSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER 152
F F+A L TL + M AR ++ + + + +FN LL+ + K E
Sbjct: 178 FDTACFNALLRTLCQEKSMTD-ARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEA 232
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL 212
F+E+ G+ +KPD+V+YN++I +CK + E A ++++M + +PD+IT+ T++ GL
Sbjct: 233 FFEEMKGK-GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL 291
Query: 213 YAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDL 272
G+ ++ ++ +M PD+ +YNA + + ++ G+A + + EM KK + P+
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 273 FSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ N + +L + + + + +E P+ + L+
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLI 393
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 46 DKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRG-------VIDILEHQKQYSDFSKEGF 98
++F+ +C + + ++D + +A G V+ L Q S + F
Sbjct: 92 NRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVF 151
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
+ L+ ++G + A ++ ++ +V + N + L+ + +++KE+
Sbjct: 152 DS-LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 159 GEISVKPDLVSYNTVIKAFCK-SKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ ++ ++N VI +FCK SK+FE A+S+ M K GV P++++FN ++DG G
Sbjct: 211 -SLGYVENVNTFNLVIYSFCKESKLFE-ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 218 FEEGEKLWGQMG---GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
+L G+MG G +SP+ +YN+ + G + A +M K V + +
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
A++ + G+ DEA + E+ + + ++V +L +GD++ A+ V++++
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 335 NTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
+ ++ +VV L + EA E
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVE 417
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 46/298 (15%)
Query: 70 RLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTR 129
RL A++ RG + K D ++ + A L+ YG++G A ++ DEM +
Sbjct: 306 RLDLAERIRG-----DMVKSGVDCNERTYGA-LVDAYGRAGSSDEALRLCDEMTSKGLVV 359
Query: 130 TVLSFNALLAAY---------------LHSKQY---RVVERI----------------FK 155
+ +N+++ ++SK R + I F+
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
E + D+V +NT++ F + K A +L M G+S D I+F TL+DG E
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKE 479
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
G+ E +++ M N + ++ YN+ + GL+ G A + ME KD+ +
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTY 535
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN--TFATLVPFLCEKGDLKTAIDVVK 331
N ++ + GN++EA +++K + + + TF ++ LC+ G + A +V+K
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 4/255 (1%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS---VKPDLVSYN 171
A +F M + V+SFN ++ + R ++ ++ G +S V P+ V+YN
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM-GMMSGNFVSPNAVTYN 295
Query: 172 TVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK 231
+VI FCK+ + A + +M K+GV + T+ L+D G +E +L +M K
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 232 NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
L + YN+ + L +E A+ L++M K+++ D F+ +++G G + EA
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 292 KKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDK 351
++ +I + + D TL+ L A ++ + + A ++D
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 352 LVSESMLSEAKEIVE 366
+ E L A EI +
Sbjct: 476 YLKEGKLERALEIYD 490
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 11/263 (4%)
Query: 103 ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS 162
+ L GK GM M + +++N+++ + + + + ERI ++
Sbjct: 273 LQLLGKMGM----------MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS-G 321
Query: 163 VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
V + +Y ++ A+ ++ + A+ + +EM G+ + + +N+++ L+ EG E
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ M KN+ D + + GL EAVEF +++ +K + D+ N ++ F
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGA 342
V + L A + G + D +F TL+ ++G L+ A+++ +
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 343 PLLQLVVDKLVSESMLSEAKEIV 365
+ +V+ L M A+ +V
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVV 524
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI Y K G +RA +++D M + N T ++ +N+++ + R + + V +
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV----NGLSKRGMAGAAEAVVNAM 527
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNG--VSPDLITFNTLLDGLYAEGRFE 219
+K D+V+YNT++ K+ E A +L +M+K S L+TFN +++ L G +E
Sbjct: 528 EIK-DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYE 586
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
+ +++ M + + PD +Y + + + + VE + + V P +I+
Sbjct: 587 KAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Query: 280 KGFVNEGN 287
+ ++ N
Sbjct: 647 RPLLDREN 654
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 42/304 (13%)
Query: 98 FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
++ ++ +Y K G A+++FD E++ ++ +N LLAAY S R+F +
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKD----LILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
E V P+++++N +I + ++ + A M +M+ +G+ P+LI++ T+++G+ G
Sbjct: 468 QLE-GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYN------ARLLGLAVEKKT-GEAVEFLQEMEKKDVKP 270
EE +M L P+ S A L L + + G + LQ ++
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 271 DLFSL-------------------------NAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
L + NA+I + GNL EA + +E P
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP 646
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ---LVVDKLVSESMLSEAK 362
D T ++ GD+ AI++ +I + R P L+ L+VD L S +A
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSM--KPCLEHYGLMVDLLASAGETEKAL 704
Query: 363 EIVE 366
++E
Sbjct: 705 RLIE 708
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
++ L +YGK G+ A ++FDE+P+RN +++NAL+ Y+ + + R+F ++
Sbjct: 211 ASSLADMYGKCGVLDDASKVFDEIPDRN----AVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
+ V+P V+ +T + A E NG+ D I +LL+ G
Sbjct: 267 KQ-GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
E E ++ +M D+ ++N + G + +A+ Q M + +K D +L +
Sbjct: 326 EYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 279 IKGFVNEGNLDEAKK 293
+ NL K+
Sbjct: 382 MSAAARTENLKLGKE 396
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
KPD+ +Y +IK ++++ + +EM ++ + PD++ + TL+ GL +GR E G +
Sbjct: 295 KPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L+ +M GK + D Y + G + K A +++ D+ NA+IKG
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFL 317
+ +D+A K F + E +PD F TL P +
Sbjct: 415 SVNQVDKAYKLFQVAIEEELEPD---FETLSPIM 445
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 191 EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
E+M+K G P + +N ++D L G F+ ++ L + ++ + GL
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+ E +E LQ M + KPD+F+ A+IK V+EGNLD + + + E+ + E PD +
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
TLV LC+ G ++ ++ E+ + + + +++++ V++ + A + E
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 103/212 (48%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
KP + YN ++ A K+ F+ A+++ E+ +++G+ + TF L+ GL GR EE +
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLE 284
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ +M PD+ +Y A + L E ++ EM + ++KPD+ + ++ G
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
+G ++ + F E++ + D+ + L+ G +++A ++ +++ ++
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIG 404
Query: 344 LLQLVVDKLVSESMLSEAKEIVELGKTNRYHP 375
+ V+ L S + + +A ++ ++ P
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI ++ + R ++++M + V +N ++ A + + + + ++++ E
Sbjct: 199 LIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFK-ED 257
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ + ++ ++K CK+ E + +L+ M +N PD+ + ++ L +EG +
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++W +M + PD+ +Y ++GL + + E EM+ K + D +I+G
Sbjct: 318 LRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEG 377
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
FV +G + A + ++ S D + ++ LC + A
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/324 (17%), Positives = 119/324 (36%), Gaps = 76/324 (23%)
Query: 90 YSDFSKEGF----SARLITLYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
Y DF ++G + +I + G K+G + ++ M E C V ++ A++ +
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
R++ E+ + +KPD+++Y T++ CK E + EM+ + D
Sbjct: 311 EGNLDASLRVWDEMRRD-EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDRE 369
Query: 204 TFNTLLDGLYAEGRFEEGEKLW---------GQMGGKN---------------------- 232
+ L++G A+G+ LW +G N
Sbjct: 370 IYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVA 429
Query: 233 ----LSPDIRSYNARLLGLAVEKKTGEAVEFLQEM----------------------EKK 266
L PD + + ++ V + + L+ + EK
Sbjct: 430 IEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKN 489
Query: 267 DVKPDLFSL------------NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+ D+F + N +++ G++ ++ F E+ K +PD ++++ +
Sbjct: 490 AMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI 549
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRC 338
EKGD+K A ++I C
Sbjct: 550 CCFVEKGDVKAACSFHEKIIEMSC 573
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 18/242 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y K + AR++FDEM ER+ V+S+N++++ Y S + ++++K +
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERD----VVSWNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
KP+ V+ +V +A +S + + ++M +N + DL N ++ G YA+ G +
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI-GFYAKCGSLDY 287
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
L+ +M K D +Y A + G EA+ EME L + NA+I
Sbjct: 288 ARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEME----SIGLSTWNAMIS 339
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
G + + +E F E+ + + P+ T ++L+P L +LK KEI R
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG----KEIHAFAIRN 395
Query: 341 GA 342
GA
Sbjct: 396 GA 397
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 134/267 (50%), Gaps = 32/267 (11%)
Query: 82 DILEHQKQYSDFSKEGFSAR--LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLA 139
DI +Q+ K+ ++R LI + K+GM ++AR++FD+ +++ + S+NA+++
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD----IFSWNAMIS 410
Query: 140 AYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS 199
Y S ++ +F+E+ VKPD + T++ F SA+S L +E+ +
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAI---TMVSVF-------SAISSLGSLEEGKRA 460
Query: 200 PDLITFNTL---------LDGLYAE-GRFEEGEKLWGQMGGKNLSPD-IRSYNARLLGLA 248
D + F+T+ + +YA+ G E ++ Q KN+S I +NA + G A
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT--KNISSSTISPWNAIICGSA 518
Query: 249 VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN--DPD 306
A++ +++ +KP+ + ++ + G ++ K +F E KS++ +PD
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF-ESMKSDHGIEPD 577
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ +V L + G L+ A +++K++
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 28/307 (9%)
Query: 71 LAGAKQFRGVIDILEHQKQYSDFSKEG---FSARLITLYGKSGMPKRARQMFDEMPERNC 127
++ G+ D Q EG S L+ +Y K AR++FDEMPERN
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERN- 238
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
++++N +L Y + E +F ++ + D+VS+ T+I + + A+
Sbjct: 239 ---LVTWNVMLNGYSKAGLIEQAEELFDQI-----TEKDIVSWGTMIDGCLRKNQLDEAL 290
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGL 247
EM + G+ P + ++D L A R G Q+ G + Y+ +
Sbjct: 291 VYYTEMLRCGMKPSEV---MMVDLLSASAR-SVGSSKGLQLHGTIVKRGFDCYDFLQATI 346
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
++ + + VK + S NA+I GFV G +++A++ F + +D D
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ----THDKDI 402
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
++ ++ + + A+ + +E+ ++ Q+ D + S+ S + L
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSS--------QVKPDAITMVSVFSAISSLGSL 454
Query: 368 GKTNRYH 374
+ R H
Sbjct: 455 EEGKRAH 461
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 43/271 (15%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV------PG 159
Y K+G+ ++A ++FD++ E++ ++S+ ++ L Q + E+ P
Sbjct: 249 YSKAGLIEQAEELFDQITEKD----IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 160 EISVKPDLVS--------------YNTVIKA------FCKSKVFE-SAVS-----MLEEM 193
E+ + DL+S + T++K F ++ + AVS L++
Sbjct: 305 EV-MMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF 363
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
E + V + + N L+ G G E+ +++ Q K DI S+NA + G A
Sbjct: 364 EAS-VKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK----DIFSWNAMISGYAQSLSP 418
Query: 254 GEAVEFLQEM-EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
A+ +EM VKPD ++ ++ + G+L+E K+ + S P+ N A
Sbjct: 419 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA 478
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCRVGAP 343
++ + G ++TA+++ + N +P
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISP 509
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 51/248 (20%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y + G ++AR++F M E+N +S+NA+++ Y+ FK P
Sbjct: 161 MITGYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPVR- 215
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+V++ +I + K+K E A +M ++M V+ +L+T+N ++ G R E+G
Sbjct: 216 ----GVVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDG 268
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLA--------------VEKKT-------------- 253
KL+ M + + P+ ++ LLG + V K T
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 254 -------GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPD 306
G+A + + M+KKDV + NA+I G+ GN D+A F E+ ++ PD
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 307 KNTFATLV 314
TF ++
Sbjct: 385 WITFVAVL 392
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 46/254 (18%)
Query: 105 LYGKSGMPKR---ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L G S P R A Q+FDE+PE + S+N +L+ Y+ + + + F +P +
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPD----TFSYNIMLSCYVRNVNFEKAQSFFDRMPFK- 153
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEE 220
D S+NT+I + + E A + M EKN VS +N ++ G G E+
Sbjct: 154 ----DAASWNTMITGYARRGEMEKARELFYSMMEKNEVS-----WNAMISGYIECGDLEK 204
Query: 221 GEKL-----------W-----GQMGGK------------NLSPDIRSYNARLLGLAVEKK 252
W G M K ++ ++ ++NA + G +
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
+ ++ + M ++ ++P+ L++ + G L ++ + KS D +
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 313 LVPFLCEKGDLKTA 326
L+ C+ G+L A
Sbjct: 325 LISMYCKCGELGDA 338
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 35/296 (11%)
Query: 84 LEHQKQYSDFSKEG---FSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAA 140
L ++Y D S E +I+ Y + G AR +FD+MP R V+S+N +L
Sbjct: 75 LVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP----CRDVMSWNTVLEG 130
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS-KVFESAVSMLEEMEKNGVS 199
Y + ER+F ++P + ++ S+N +IK + ++ +V E S +++ V
Sbjct: 131 YANIGDMEACERVFDDMP-----ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVV 185
Query: 200 PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
P+ T +L G F+ G+ W G+ L + N + + + K G A+E
Sbjct: 186 PNDATMTLVLSACAKLGAFDFGK--WVHKYGETLGYNKVDVNVKNALIDMYGKCG-AIEI 242
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPF--- 316
E+ K + DL S N +I G G+ EA F E++ S PDK TF ++
Sbjct: 243 AMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKH 302
Query: 317 --LCEKG-----DLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
L E G + T ++ EI + C VVD L L++A E +
Sbjct: 303 MGLVEDGLAYFNSMFTDFSIMPEIEHCGC---------VVDLLSRAGFLTQAVEFI 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 82 DILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 141
+++ H K ++ + F ++ L G + A ++F EM E+N V+ + +++ Y
Sbjct: 17 ELITHAKCSTESLNQMFLFGMLCLMG---VIASANKVFCEMVEKN----VVLWTSMINGY 69
Query: 142 LHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
L +K R F ++S + D+V +NT+I + + A S+ ++M D
Sbjct: 70 LLNKDLVSARRYF-----DLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP----CRD 120
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAV-EFL 260
++++NT+L+G G E E+++ M +N + S+N + G A + E + F
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERN----VFSWNGLIKGYAQNGRVSEVLGSFK 176
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW---FGEIEKSENDPDKNTFATLVPFL 317
+ +++ V P+ ++ ++ G D KW +GE N D N L+
Sbjct: 177 RMVDEGSVVPNDATMTLVLSACAKLGAFDFG-KWVHKYGE-TLGYNKVDVNVKNALIDMY 234
Query: 318 CEKGDLKTAIDVVKEI 333
+ G ++ A++V K I
Sbjct: 235 GKCGAIEIAMEVFKGI 250
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 23/235 (9%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI++Y ++G + A ++FD+ P R+ V+S+ AL+ Y +++F E+P
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRD----VVSYTALIKGYASRGYIENAQKLFDEIP--- 227
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
VK D+VS+N +I + ++ ++ A+ + ++M K V PD T T++ G E G
Sbjct: 228 -VK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE---AVEFLQEMEKKDVKPDLFSLNAI 278
++ + +++ NA + + K GE A + + KDV S N +
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNAL---IDLYSKCGELETACGLFERLPYKDV----ISWNTL 338
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
I G+ + EA F E+ +S P+ T +++P G AID+ + I
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG----AIDIGRWI 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P+ ++ V+K+ KSK F+ + + K G DL +L+ GR E+ K+
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
+ K+ D+ SY A + G A A + E+ KDV S NA+I G+
Sbjct: 192 FD----KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGYAE 243
Query: 285 EGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
GN EA + F ++ K+ PD++T T+V + G ++
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ +SG + RQ+ + + + NAL+ Y + +F+ +P +
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK- 330
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
D++S+NT+I + +++ A+ + +EM ++G +P+ +T ++L G + G
Sbjct: 331 ----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+ + K L + + R + + K G+ +E ++ + L S NA+I G
Sbjct: 387 RWIHVYI-DKRLKGVTNASSLRTSLIDMYAKCGD-IEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNT 336
F G D + F + K PD TF L+ G L D+ + IF T
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML----DLGRHIFRT 495
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 60/338 (17%)
Query: 31 LSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQY 90
L+QD+YKE + K +D F Y ++ A AK ++ + + + K
Sbjct: 353 LAQDIYKEAKRMESSGLLK----LDAF-----TYCTIIKVFADAKMWKWALKVKDDMKSV 403
Query: 91 SDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVV 150
+ LI+ +G+ ++A +F+EM C FN LL A + + QY
Sbjct: 404 GVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRA 463
Query: 151 ERIFKEV------------------------------PGEI----------------SVK 164
R+F+ PG + K
Sbjct: 464 FRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFK 523
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P +YN ++KA C + + +++EM+ G+SP+ IT++TL+D G E ++
Sbjct: 524 PTTATYNILLKA-CGTDYYRGK-ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVN 284
M PD+ +Y + A K A +EM + +KP+ + N ++K
Sbjct: 582 LRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSK 641
Query: 285 EGNLDEAKKWFGEIEKSEN---DPDKNTFATLVPFLCE 319
G+L E ++ + N P+ + L+ CE
Sbjct: 642 YGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEIS---VKPDLVSYNTV 173
+++ M + T + S+N LL + + + + I+KE S +K D +Y T+
Sbjct: 321 KVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTI 380
Query: 174 IKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNL 233
IK F +K+++ A+ + ++M+ GV+P+ T+++L+ G E+ L+ +M
Sbjct: 381 IKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGC 440
Query: 234 SPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKK 293
P+ + +N L + A Q + V L++ + + KG + N+ +
Sbjct: 441 EPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNG 500
Query: 294 WFGEIEKSENDP 305
+ ++ N P
Sbjct: 501 PGSLVNRNSNSP 512
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+ YGK AR++F EMPERN +S+ AL+ AY+ S + + +F +P
Sbjct: 151 FVDFYGKCKDLFSARKVFGEMPERN----AVSWTALVVAYVKSGELEEAKSMFDLMP--- 203
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ +L S+N ++ KS +A + +EM K D+I++ +++DG G
Sbjct: 204 --ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSA 257
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
L+ + G D+R+++A +LG A + EA + EM K+VKPD F + ++
Sbjct: 258 RDLFEEARG----VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA 313
Query: 282 FVNEGNLDEAKK 293
G + +K
Sbjct: 314 CSQMGCFELCEK 325
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y KSG + A+ MFD MPERN + S+NAL+ + S +++F E+P
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERN----LGSWNALVDGLVKSGDLVNAKKLFDEMP--- 234
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
K D++SY ++I + K SA + E E GV D+ ++ L+ G G+ E
Sbjct: 235 --KRDIISYTSMIDGYAKGGDMVSARDLFE--EARGV--DVRAWSALILGYAQNGQPNEA 288
Query: 222 EKLWGQMGGKNLSPD------IRSYNARLLGLAVEKKTGEAVEFLQEMEK---KDVKPDL 272
K++ +M KN+ PD + S +++ + +K + Q M K V P L
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH--QRMNKFSSHYVVPAL 346
Query: 273 FSLNAIIKGFVNEGNLDEAKKWFGEIEKSE 302
+NA G++D A K F E+ + +
Sbjct: 347 IDMNA------KCGHMDRAAKLFEEMPQRD 370
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 93 FSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER 152
F G +++ Y +G+PK ARQ+FDEM ERN V+S+N L++ Y+ ++
Sbjct: 45 FKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----VVSWNGLVSGYIKNRMIVEARN 100
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDG 211
+F+ +P + ++VS+ ++K + + + A S+ M E+N VS + + G
Sbjct: 101 VFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS-----WTVMFGG 150
Query: 212 LYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
L +GR ++ KL+ M K D+ + + GL E + EA EM +++V
Sbjct: 151 LIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNV--- 203
Query: 272 LFSLNAIIKGFVNEGNLDEAKKWF 295
+ +I G+ +D A+K F
Sbjct: 204 -VTWTTMITGYRQNNRVDVARKLF 226
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 41/295 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
+IT Y ++ AR++F+ MPE+ T +S+ ++L Y S + E F+ +P
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Query: 159 --------------GEISVKP---------DLVSYNTVIKAFCKSKVFE-SAVSMLEEME 194
GEIS D ++ +IKA+ + K FE A+ + +M+
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY-ERKGFELEALDLFAQMQ 323
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
K GV P + ++L + G ++ + D+ Y A +L + + K G
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV--YVASVL-MTMYVKCG 380
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
E V+ ++ K D+ N+II G+ + G +EA K F E+ S P+K T ++
Sbjct: 381 ELVKAKLVFDRFSSK-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 315 PFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQ---LVVDKLVSESMLSEAKEIVE 366
G L+ +++ + + + C P ++ VD L + +A E++E
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCV--TPTVEHYSCTVDMLGRAGQVDKAMELIE 492
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 15/307 (4%)
Query: 27 SIKSLSQDLYKEVNLRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQF---RGVIDI 83
++ SL L KE ++ + F K D + +T + + A++F R ++D+
Sbjct: 241 AMNSLMDALVKENSIEHAHEVFLKLFDTIKPDART--FNILIHGFCKARKFDDARAMMDL 298
Query: 84 LEHQKQYSDFSKEGFS-ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
+ + ++F+ + + + Y K G +R +M +EM E C V+++ ++ +
Sbjct: 299 M----KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
SKQ +++++ + V PD Y+++I K+ F+ A + E+M GV D+
Sbjct: 355 KSKQVAEALGVYEKMKEDGCV-PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMG---GKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
+ +NT++ R E +L +M G++ SP++ +Y L +KK
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL 473
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
L M K DV D+ + +I+G G ++EA +F E + P +T LV L E
Sbjct: 474 LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-E 532
Query: 320 KGDLKTA 326
K ++ A
Sbjct: 533 KKNMAEA 539
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 68 VRRLAGAKQFRGVID-ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERN 126
+RRLA + ++ +D LE +K Y + L+ K + A ++F ++ +
Sbjct: 210 MRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-T 268
Query: 127 CTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESA 186
+FN L+ + ++++ R ++ PD+V+Y + ++A+CK F
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDA-RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
MLEEM +NG +P+++T+ ++ L + E ++ +M PD + Y++ +
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-- 304
L+ + +A E ++M + V+ D+ N +I ++ + A + +E E +
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC 447
Query: 305 -PDKNTFATLV 314
P+ T+A L+
Sbjct: 448 SPNVETYAPLL 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 133 SFNALLAAYLHSKQYRVVERIFKEV-PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
++NA++ + + ++ + E+ E S L + + V++ KS + AV
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 192 EMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVE 250
EMEK+ GV D I N+L+D L E E +++ ++ + PD R++N + G
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKA 286
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
+K +A + M+ + PD+ + + ++ + EG+ + E+ ++ +P+ T+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
++ L + + A+ V +++ C A ++ L +A EI E
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 38/344 (11%)
Query: 41 LRKLVDKFKKACDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFS- 99
++K V+ K CD K +ED V+ L+ +L+ +++S+ + +
Sbjct: 95 VKKPVEDIDKVCDF--LNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGF 152
Query: 100 ---ARLITLYGKSGMPKRAR--------------QMFDEMPERNCTR--TVLSFNALLAA 140
A T Y SG A ++ +EM + ++ T+ + + ++
Sbjct: 153 FIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRR 212
Query: 141 YLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
S +Y F E+ VK D ++ N+++ A K E A + ++ + + P
Sbjct: 213 LAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKP 271
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
D TFN L+ G +F++ + M +PD+ +Y + + E E L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND---PDKNTFATLVPFL 317
+EM + P++ + ++ + EA G EK + D PD +++L+ L
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEA---LGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 318 CEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
+ G K A ++ +++ N R D LV +M+S A
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVR---------RDVLVYNTMISAA 423
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 10/232 (4%)
Query: 102 LITLYGKSG-MPKRARQMFDEMPERNCTRTVLSFNALLAAY----LHSKQYRVVERIFKE 156
LI+ YG++ M A F M + + S+ AL+ AY H K Y E + KE
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+KP + +Y +V+ AF +S + + + M + + IT+NTLLDG +G
Sbjct: 515 -----GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ E + + L P + +YN + A + + + L+EM ++KPD + +
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAID 328
+I FV + A + + KS PD ++ L L +K K D
Sbjct: 630 TMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKD 681
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 138/317 (43%), Gaps = 8/317 (2%)
Query: 53 DVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSG-M 111
D + FR +Y + L+ ++++ ++ E + + + A LIT K+G
Sbjct: 266 DKEEFR-DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRS 324
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHS--KQYRVVERIFKEVPGEISVKPDLVS 169
K ++F++M E+ + F L+ ++ K+ +V + E G ++ + +
Sbjct: 325 AKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKG---IRSNTIV 381
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YNT++ A+ KS E + EM G+ P T+N L+D + + E L +M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGE-AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL 288
L P+++SY + KK + A + M+K +KP S A+I + G
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 289 DEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLV 348
++A F E+ K P T+ +++ GD +++ K + + + +
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 349 VDKLVSESMLSEAKEIV 365
+D + + EA+++V
Sbjct: 562 LDGFAKQGLYIEARDVV 578
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ Y KS + +F EM ++ + ++N L+ AY Q +VE + +E+ ++
Sbjct: 385 LMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME-DL 443
Query: 162 SVKPDLVSYNTVIKAFCKSK-VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
++P++ SY +I A+ ++K + + A M+K G+ P ++ L+ G E+
Sbjct: 444 GLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ +M + + P + +Y + L TG+ +E + M ++ +K + N ++
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLD 563
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
GF +G EA+ E K P T+ L+ G ++KE+
Sbjct: 564 GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 38/250 (15%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L TL G+ M + +P++ R V +NA ++ S++Y ++ E +I
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVY-EAMDKI 302
Query: 162 SVKPDLVS------------------------------------YNTVIKAFCKSKVFES 185
+V PD V+ + ++K+FC + E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
A+ + EMEK G+ + I +NTL+D EE E L+ +M K L P +YN +
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNL-DEAKKWFGEIEKSEND 304
A + L+EME ++P++ S +I + + D A F ++K
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 305 PDKNTFATLV 314
P +++ L+
Sbjct: 483 PSSHSYTALI 492
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
KQ S ++ + GK + Q+FDEM +R+ ++ LL Y + +
Sbjct: 135 KQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKV 194
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
+F E E + DLV+++ ++ C+ K E A ++ + D+ N
Sbjct: 195 DEAVGVF-ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNM 252
Query: 208 LLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
+L+G G E ++ W + PD+ SY + L + K G+A+E + M
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAI 327
PD+ N +I + + EA + F EI + DP+ T+ +L+ LC+ +
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 328 DVVKEI 333
++V+E+
Sbjct: 373 ELVEEM 378
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YN ++ K + FE + +EM K + T+ LL+ A + +E ++ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ D+ +++ L+ L K E E L +++ D+ ++N I+ G+ GN+
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHV-EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
EAK+++ +I S+ PD ++ T++ L +KG L A+++ + +++TR + V+
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 350 DKLVSESMLSEAKEI 364
D L + + EA E+
Sbjct: 325 DALCFKKRIPEALEV 339
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 146/353 (41%), Gaps = 65/353 (18%)
Query: 64 YEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMP 123
YE + R A A + + + E +K++ G L+ +G R + + E
Sbjct: 181 YEVLLNRYAAAHKVDEAVGVFERRKEF------GIDDDLVAFHGLLMWLCRYKHV--EFA 232
Query: 124 ER-NCTR------TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
E C+R + + N +L + +R +K++ +PD+VSY T+I A
Sbjct: 233 ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS-KCRPDVVSYGTMINA 291
Query: 177 FCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPD 236
K A+ + M +PD+ N ++D L + R E +++ ++ K P+
Sbjct: 292 LTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 237 IRSYNARLLGLAVEKKTGEAVEFLQEMEKK------------------------------ 266
+ +YN+ L L ++T + E ++EME K
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLER 411
Query: 267 ------DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++ DL++L + + +V ++ ++ + E+E+S PD+ T+ + L K
Sbjct: 412 MAKNKCEMTSDLYNL--MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTK 469
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVV----------DKLVSESMLSEAKE 363
G + A+ +E+ ++ V P ++++ DK++ ++ SE E
Sbjct: 470 GKIGEALSYFQEMM-SKGMVPEPRTEMLLNQNKTKPRVEDKMLRSNLTSEESE 521
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 55/356 (15%)
Query: 55 DRFRTKTG---IYEDT----VRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLY- 106
DR R+ G + DT +RR A A + I E + Y K RL+ +
Sbjct: 160 DRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLL 219
Query: 107 ---GKSGMPKRARQMFDEMP---ERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
K G + A + + + N +V FN LL + S++ + E++++E+
Sbjct: 220 DALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKA- 278
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM--------------------------E 194
++VKP +V+Y T+I+ +C+ + + A+ +LEEM E
Sbjct: 279 MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSE 338
Query: 195 KNGV---------SPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
G+ P ++T+N+L+ G K+ M + + P +YN
Sbjct: 339 ALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFK 398
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
+ KT E + ++ + PD + + I+K +G L A + E++ DP
Sbjct: 399 YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEA 361
D T L+ LC L+ A E F+ R G + Q + K++ + S+
Sbjct: 459 DLLTTTMLIHLLCRLEMLEEAF----EEFDNAVRRGI-IPQYITFKMIDNGLRSKG 509
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 141/353 (39%), Gaps = 48/353 (13%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRG----VIDILEHQKQYSDFSKEGFSARLITLYGKSGMP 112
F +++ V L A++F V D + + + S + F LI Y ++GM
Sbjct: 131 FTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIV-LIRRYARAGMV 189
Query: 113 KRARQMFD-----EMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVK--P 165
++A + F+ E ++ T L LL A R + + G + P
Sbjct: 190 QQAIRAFEFARSYEPVCKSATELRL-LEVLLDALCKEGHVREASMYLERIGGTMDSNWVP 248
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
+ +N ++ + +S+ + A + EEM+ V P ++T+ TL++G R + ++
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M + + +N + GL + EA+ ++ + P + + N+++K F
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 286 GNLDEAK----------------------KWFGEIEKSE-------------NDPDKNTF 310
G+L A K+F + K+E + PD+ T+
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTY 428
Query: 311 ATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKE 363
++ LCE G L A+ V KE+ N +++ L ML EA E
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 52/271 (19%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +Y K AR++FDEMPER+ V+S+ L+AAY +F+ +P +
Sbjct: 190 MIDMYVKCESIDCARKVFDEMPERD----VISWTELIAAYARVGNMECAAELFESLPTK- 244
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITF---------------- 205
D+V++ ++ F ++ + A+ + MEK+G+ D +T
Sbjct: 245 ----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 206 ---------------------NTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARL 244
+ L+D G EE ++ M KN + +Y++ +
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN----VFTYSSMI 356
Query: 245 LGLAVEKKTGEAVEFLQEM-EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN 303
LGLA + EA+ M + ++KP+ + + + G +D+ ++ F + ++
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 304 -DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
P ++ + +V L G L+ A++++K +
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
AR++FD MPERN ++S+N ++ Y +KQ + R+F+E+ S+ PD V+ +V+
Sbjct: 226 ARKLFDAMPERN----LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
A + +++ + + +LD G E+ ++++ +M K ++
Sbjct: 282 PAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA 341
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
S+NA + G A+ A++ M ++ KPD ++ A+I + G ++E +KW
Sbjct: 342 ----SWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKW 396
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
F + + + + +V L G LK A D++ +
Sbjct: 397 FHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 90 YSDFSKEGFSARL------ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+S + GF A + + +Y K G AR FDEMP R+ +S+ AL++ Y+
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPH----RSEVSWTALISGYIR 156
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLI 203
+ + ++F ++P VK D+V YN ++ F KS SA + +EM V I
Sbjct: 157 CGELDLASKLFDQMP---HVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----I 208
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
T+ T++ G + KL+ M +NL S+N + G K+ E + QEM
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 264 EK-KDVKPDLFSLNAIIKGFVNEGNL 288
+ + PD ++ +++ + G L
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGAL 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 49/252 (19%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
AR++FD+ P+R+ + LS N+++ AYL ++QY +++++ E PD ++ T+
Sbjct: 29 ARKLFDQRPQRD--DSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDL-------------------------------I 203
K+ S + + ++ + G D+ +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 204 TFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
++ L+ G G + KL+ QM D+ YNA + G A EM
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 264 EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN--TFATLVPFLCEKG 321
K V + +I G+ N ++D A+K F + P++N ++ T++ C+
Sbjct: 203 THKTV----ITWTTMIHGYCNIKDIDAARKLFDAM------PERNLVSWNTMIGGYCQNK 252
Query: 322 DLKTAIDVVKEI 333
+ I + +E+
Sbjct: 253 QPQEGIRLFQEM 264
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ +Y K G ++A+++FDEMPE+ V S+NA++ Y + R +F V I
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQ----VASWNAMIHGYALNGNARAALDLF--VTMMI 368
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
KPD ++ VI A + E M + G++ + + ++D L G +E
Sbjct: 369 EEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEA 428
Query: 222 EKLWGQM 228
E L M
Sbjct: 429 EDLITNM 435
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 85 EHQKQYSDFSKEGFSAR------LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALL 138
E ++ + K GF LI LYG G AR++FDEMPE R+++S+N+++
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE----RSLVSWNSMI 224
Query: 139 AAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKS----KVFESAVSMLEEME 194
A + +Y ++F+E+ + S +PD + +V+ A C + A + L
Sbjct: 225 DALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSA-CAGLGSLSLGTWAHAFLLRKC 281
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
V+ D++ N+L++ G E+++ M ++L+ S+NA +LG A +
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA----SWNAMILGFATHGRAE 337
Query: 255 EAVEFLQEM--EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFA 311
EA+ F M ++++V+P+ + ++ + G +++ +++F + + +P +
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 312 TLVPFLCEKGDLKTAIDVVKEI 333
+V + G + AID+V +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSM 419
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 129/315 (40%), Gaps = 37/315 (11%)
Query: 57 FRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGMPKRAR 116
++ + Y +++ K F+ + + ++ + A +I YG++G+ A
Sbjct: 674 YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAI 733
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE--RIFKE------VP---------- 158
+ F EM + + +F L+ K V E R F+E VP
Sbjct: 734 RTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLG 793
Query: 159 ------------------GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSP 200
G+I P V+Y+ I+A C+ E A+S L E
Sbjct: 794 CLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL 852
Query: 201 DLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL 260
D T+ +++ GL G ++ M P + Y + ++ EK+ + +E
Sbjct: 853 DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC 912
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
Q+ME + +P + + A+I G+++ G ++EA F +E+ PD T++ + LC+
Sbjct: 913 QKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA 972
Query: 321 GDLKTAIDVVKEIFN 335
+ A+ ++ E+ +
Sbjct: 973 CKSEDALKLLSEMLD 987
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
EI KP + Y ++I F K K E + ++ME P ++T+ ++ G + G+ E
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E + M + SPD ++Y+ + L K+ +A++ L EM K + P + +
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Query: 280 KGFVNEGNLDEAK 292
G EG D A+
Sbjct: 1002 YGLNREGKHDLAR 1014
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y +I + + A+ E ++K+G P + T+ ++ L+ +FE+G L+ +M
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ PD + A + G + + EA + ME+K +KP S + +K D
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
E K F ++ S+ + F+ ++ + EK K I ++KEI
Sbjct: 521 EIIKIFNQMHASKIVIRDDIFSWVISSM-EKNGEKEKIHLIKEI 563
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 93/200 (46%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
YNT++ +++ + ++ EMEKNG D+ T+ L+ + +G ++ +M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
D +YN + L + + A+EF +EM +K + L + ++ +D
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
+ ++ + + + F L+ C G +K A+++++E+ N + A +++V
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 350 DKLVSESMLSEAKEIVELGK 369
L + + +A EIV++ K
Sbjct: 372 KGLCRANRMVDALEIVDIMK 391
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 111 MPKRARQMFDEMPERNC-TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
+P A + F+ + +++ + V +N +L+ ++ +V+ + E+ D+ +
Sbjct: 168 VPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKN-GCDKDIRT 226
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
+ +I + K+K + + E+M K+G D +N ++ L GR + + + +M
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
K ++ +R+Y L +A +K +M + + + ++K F G +
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVV 349
EA + E++ E D F LV LC + A+++V +I R + + +++
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIII 405
Query: 350 DKLVSESMLSEAKEIVELGKTNRYHP 375
+ ++ +S+A E E+ K + P
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPP 431
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P + +Y +++ K K FE ++ EM +NG+ PD + ++ G + R E K+
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKV 490
Query: 225 WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME--KKDVKPDLFS 274
+ M K + P +SY+ + L + E ++ +M K ++ D+FS
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 15/210 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I +Y K G K+AR +FD M ++N +++N ++ Y+ S Q ++F ++P
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNS----VTWNTMIDGYMRSGQVDNAAKMFDKMP--- 167
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ DL+S+ +I F K E A+ EM+ +GV PD + L+ G G
Sbjct: 168 --ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE-AVEFLQEMEKKDVKPDLFSLNAIIK 280
+ + ++ ++R N+ L+ L E A + MEK+ V S N++I
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNS-LIDLYCRCGCVEFARQVFYNMEKRTV----VSWNSVIV 280
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTF 310
GF GN E+ +F ++++ PD TF
Sbjct: 281 GFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 5/202 (2%)
Query: 94 SKEGFSARL-ITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVER 152
+K+ FS + + + KSG P +A +++ EM R V+++N ++ A S+ R
Sbjct: 221 TKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIR 280
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL 212
+F+E+ E +P++ ++NT+IK C+ A ML+EM K G PD IT+ L L
Sbjct: 281 VFREMR-ERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL 339
Query: 213 YAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDL 272
+ E L+G+M + P + +Y + + + M++ PD
Sbjct: 340 ---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDS 396
Query: 273 FSLNAIIKGFVNEGNLDEAKKW 294
+ NA+I + +G LD A+++
Sbjct: 397 AAYNAVIDALIQKGMLDMAREY 418
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
+ K G + ++ + +M T+ + S++ + S + +++KE+ +K
Sbjct: 199 WSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSR-RMKL 257
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D+V+YNTVI+A S+ E + + EM + G P++ T NT++ L +GR + ++
Sbjct: 258 DVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML 317
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
+M + PD +Y L +K E + M + V+P + + +++ F
Sbjct: 318 DEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW 374
Query: 286 GNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
G L + +++S + PD + ++ L +KG L A + +E+
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIF--KEVPGEISV 163
Y + + + A +D++ + N R SF L+ A K E + K V G
Sbjct: 127 YVTAHLVQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFS 185
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
+ +N +++ + K + ++M+ GV+ DL +++ +D + G+ + K
Sbjct: 186 VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK 245
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
L+ +M + + D+ +YN + + + + +EM ++ +P++ + N IIK
Sbjct: 246 LYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
+G + +A + E+ K PD T+ L
Sbjct: 306 EDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 166 DLVSYNTVIKAFCKSKVFESAVSML--EEMEKNGVS-PDLITFNTLLDGLYAEGRFEEGE 222
D S+ ++ A C+ K A + + + NG S + N +L G G + + +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 223 KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGF 282
+ W +M + ++ D+ SY+ + + K +AV+ +EM+ + +K D+ + N +I+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 283 VNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
++ + F E+ + +P+ T T++ LCE G ++ A ++ E+ C+
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 47/353 (13%)
Query: 31 LSQDLYKEVNLRKLVDKFKKACDVDRFRT---KTGIYEDTVRRLAGAKQFRGVIDILEHQ 87
LSQ L K+ N + F++A +RF + +Y + L + + + ++E
Sbjct: 15 LSQILKKQKNPVTALKLFEEA--KERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERM 72
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
K+ S K+ A +I + ++G + A +F + E NC LSF+ LL + +
Sbjct: 73 KEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESEL 132
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
IF++ V + + N ++K C+ + A + +EM G PD ++
Sbjct: 133 EAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 208 LLDGLYAEGRFEEGEKL----WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
L+ G EG+ EE L + ++ K DI Y L L + +A+E L ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 264 EKKDVK-------------------------------------PDLFSLNAIIKGFVNEG 286
+K +K P L S +A+ EG
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV-KEIFNTRC 338
L E ++ + +P + V LC G LK A+ V+ KE+ C
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 52/267 (19%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQ--------YRVVERIFKEVPGEISVKPD 166
A Q+F EM + C S+ L+ + + Y + RI ++ GE D
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE-----D 225
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS--------------------------- 199
+V Y ++ A C + + A+ +L ++ + G+
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRL 285
Query: 200 ----------PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
P L +++ + L+ EG+ EGE++ M K P Y A++ L
Sbjct: 286 LTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 250 EKKTGEAVEFL-QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-PDK 307
K EAV + +EM + P + N +IKG ++G EA + ++ K + ++
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIF 334
T+ TLV LC G A V++E+
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEML 432
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEK 223
P + YN +IK C AV L++M K + T+ TL+DGL +G+F E +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
+ +M K+ P + +Y+ + GL + EAV +L+EM +D+ P+
Sbjct: 427 VMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSML-EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+P Y +KA C++ + AVS++ +EM + P + +N L+ GL +G+ E
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 223 KLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+M + + + +Y + GL + + EA + ++EM K P + + + +IKG
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ EA W E+ + P+ + + L +C AIDVV+
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC-----FCAIDVVE 494
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 47/353 (13%)
Query: 31 LSQDLYKEVNLRKLVDKFKKACDVDRFRT---KTGIYEDTVRRLAGAKQFRGVIDILEHQ 87
LSQ L K+ N + F++A +RF + +Y + L + + + ++E
Sbjct: 15 LSQILKKQKNPVTALKLFEEA--KERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERM 72
Query: 88 KQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQY 147
K+ S K+ A +I + ++G + A +F + E NC LSF+ LL + +
Sbjct: 73 KEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESEL 132
Query: 148 RVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNT 207
IF++ V + + N ++K C+ + A + +EM G PD ++
Sbjct: 133 EAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 208 LLDGLYAEGRFEEGEKL----WGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEM 263
L+ G EG+ EE L + ++ K DI Y L L + +A+E L ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 264 EKKDVK-------------------------------------PDLFSLNAIIKGFVNEG 286
+K +K P L S +A+ EG
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 287 NLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVV-KEIFNTRC 338
L E ++ + +P + V LC G LK A+ V+ KE+ C
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 52/267 (19%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQ--------YRVVERIFKEVPGEISVKPD 166
A Q+F EM + C S+ L+ + + Y + RI ++ GE D
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE-----D 225
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVS--------------------------- 199
+V Y ++ A C + + A+ +L ++ + G+
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRL 285
Query: 200 ----------PDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
P L +++ + L+ EG+ EGE++ M K P Y A++ L
Sbjct: 286 LTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 250 EKKTGEAVEFL-QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND-PDK 307
K EAV + +EM + P + N +IKG ++G EA + ++ K + ++
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIF 334
T+ TLV LC G A V++E+
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEML 432
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEEGEK 223
P + YN +IK C AV L++M K + T+ TL+DGL +G+F E +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPD 271
+ +M K+ P + +Y+ + GL + EAV +L+EM +D+ P+
Sbjct: 427 VMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSML-EEMEKNGVSPDLITFNTLLDGLYAEGRFEEGE 222
+P Y +KA C++ + AVS++ +EM + P + +N L+ GL +G+ E
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 223 KLWGQMGGK-NLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+M + + + +Y + GL + + EA + ++EM K P + + + +IKG
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVK 331
+ EA W E+ + P+ + + L +C AIDVV+
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC-----FCAIDVVE 494
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 14/272 (5%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+ L+ +Y K G AR+MFDEMP+RN V++++ ++ Y + +FKE
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRN----VVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
E ++ + S+++VI S + E + + + L LY++
Sbjct: 211 E-NLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 220 EGE-KLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
EG +++ ++ KNL +NA L A T + +E + M+ +KP+ + +
Sbjct: 269 EGAYQVFNEVPVKNLGI----WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 279 IKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE--IFNT 336
+ + G +DE + +F ++++S +P +A+LV L G L+ A++V+ I T
Sbjct: 325 LNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPT 384
Query: 337 RCRVGAPLLQLVVDKLVSESMLSEAKEIVELG 368
GA L V K + + A ++ ELG
Sbjct: 385 ESVWGALLTSCTVHKNTELAAFA-ADKVFELG 415
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 18/240 (7%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I+ Y + K AR MF +M ERN V+S+NAL+A Y + + +F + E
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERN----VVSWNALIAGYTQNGENEEALSLFCLLKRE- 380
Query: 162 SVKPDLVSYNTVIKAFCKSKV-----FESAVSMLEEMEK--NGVSPDLITFNTLLDGLYA 214
SV P S+ ++KA C ++ V +L+ K +G D+ N+L+D
Sbjct: 381 SVCPTHYSFANILKA-CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 215 EGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFS 274
G EEG ++ +M + D S+NA ++G A EA+E +EM + KPD +
Sbjct: 440 CGCVEEGYLVFRKM----MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ ++ + G ++E + +F + + P ++ + +V L G L+ A +++E+
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 15/278 (5%)
Query: 91 SDFSKEGF-SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRV 149
S FS E F RLI Y K G + RQ+FD+MP+RN + ++N+++
Sbjct: 49 SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN----IYTWNSVVTGLTKLGFLDE 104
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
+ +F+ +P + D ++N+++ F + E A+ M K G + +F ++L
Sbjct: 105 ADSLFRSMP-----ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
+G ++ + D+ +A + + +A EM ++V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV- 218
Query: 270 PDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
S N++I F G EA F + +S +PD+ T A+++ +K +V
Sbjct: 219 ---VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 330 VKEIF-NTRCRVGAPLLQLVVDKLVSESMLSEAKEIVE 366
+ N + R L VD S + EA+ I +
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 22/248 (8%)
Query: 92 DFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE 151
+F + GF ITLY K+G + AR++FDE PER + S+NA++ H+ +
Sbjct: 152 EFCESGF----ITLYCKAGEFENARKVFDENPERK----LGSWNAIIGGLNHAGRANEAV 203
Query: 152 RIFKEVPGEISVKPDLVSYNTVIKAFCK-----SKVFESAVSMLEEMEKNGVSPDLITFN 206
+F ++ ++PD + +V A C S F+ +L+ K D++ N
Sbjct: 204 EMFVDMK-RSGLEPDDFTMVSV-TASCGGLGDLSLAFQLHKCVLQ--AKTEEKSDIMMLN 259
Query: 207 TLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKK 266
+L+D GR + ++ +M +N + S+++ ++G A T EA+E ++M +
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRN----VVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 267 DVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS-ENDPDKNTFATLVPFLCEKGDLKT 325
V+P+ + ++ V+ G ++E K +F ++ E +P + + +V L G LK
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 326 AIDVVKEI 333
A VV+E+
Sbjct: 376 AKKVVEEM 383
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I Y + G + A +F E E+ C ++ + L+ A + ++R E I + E
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCL-EK 768
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG-RFEE 220
+++ D V YNT+IKA ++ + A + E M +GV + T+NT++ +Y G + ++
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS-VYGRGLQLDK 827
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+++ L D + Y ++ K EA+ EM+KK +KP S N ++K
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA---IDVVKE 332
E + +E++ D +T+ TL+ E A I +VKE
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 19/293 (6%)
Query: 53 DVDRFRTKTGIYEDTVRRLAGAKQF--RGVIDILEHQKQYSDFSKEGFSARLITLYGKS- 109
D R K Y T+RR G++ + + E QY + + G +YGK
Sbjct: 69 DARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNG------QMYGKHV 122
Query: 110 --------GMPKRARQMFDEMPERNCTRTV-LSFNALLAAYLHSKQYRVVERIFKEVPGE 160
G+ +R RQ D+M + LSF + + +R V F + +
Sbjct: 123 VAAIKTVRGLSQR-RQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQ 181
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+S +P +V Y V++ + + + A EM + G PD + T+L GR
Sbjct: 182 LSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSA 241
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
+ + + + YN L L + G+ ++ EM ++ V P+ F+ ++
Sbjct: 242 MLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS 301
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ +G +EA K FGE++ P++ T+++++ + GD + AI + +++
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL----HSKQ---YRVVE--R 152
++ LYG+ G K A + F EM E C ++ +L Y HS Y+ V+ R
Sbjct: 194 VLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERR 253
Query: 153 IF---------------KEVPGEI----------SVKPDLVSYNTVIKAFCKSKVFESAV 187
I K G++ V P+ +Y V+ ++ K E A+
Sbjct: 254 ILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEAL 313
Query: 188 SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYN-ARLLG 246
EM+ G P+ +T+++++ G +E+ L+ M + + P +Y A +L
Sbjct: 314 KAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS--NYTCATMLS 371
Query: 247 LAVEKKT-GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
L + + +A+ +ME+ + D II+ + G +A+ F E E+
Sbjct: 372 LYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLA 431
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
D+ T+ + G++ A+DV+ E+ TR
Sbjct: 432 DEKTYLAMSQVHLNSGNVVKALDVI-EMMKTR 462
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 2/271 (0%)
Query: 101 RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGE 160
R+I+ + + G +A + D + + L+A Y + + +R++ GE
Sbjct: 640 RVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYL-AAGE 698
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
S P ++I A+ + E A + E + G P +T + L++ L G+ E
Sbjct: 699 -SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
E + KN+ D YN + + K A E + M V + + N +I
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
+ LD+A + F +S D+ + ++ + G + A+ + E+ +
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 341 GAPLLQLVVDKLVSESMLSEAKEIVELGKTN 371
G P ++V + + E E+++ + N
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 12/224 (5%)
Query: 52 CDVDRFRTKTGIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGFSARLITLYGKSGM 111
C + + T +Y Q I+I + ++ + E +I YGK G
Sbjct: 807 CSIQTYNTMISVY-------GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 112 PKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK--EVPGEISVKPDLVS 169
A +F EM ++ S+N ++ S+ + V+ + + E G + DL +
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCT---DLST 916
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
Y T+I+ + +S F A + +++ G+ F++LL L G EE E+ + +M
Sbjct: 917 YLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMS 976
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLF 273
+SPD L G + + F ++M + V+ D F
Sbjct: 977 EAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRF 1020
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 148/334 (44%), Gaps = 19/334 (5%)
Query: 48 FKKACDVDRFRTKTGIYEDTVRRLAGAKQFRG-VIDILEHQKQYSDFSKEGFSARLITLY 106
F KA R T +Y + L K F G VID+ + E +++ Y
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQ-KKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSY 303
Query: 107 GKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPD 166
K G + A + F EM ++++++++ + + + +++++ + + P
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ-GIVPS 362
Query: 167 LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLD-----GLY--AEGRFE 219
+ T++ + K++ + A+S+ +ME+N + D + ++ GL+ A+ FE
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E E+L NL D ++Y A +A++ ++ M+ +D+ F+ ++
Sbjct: 423 ETERL-------NLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVML 475
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
+ + N+D A++ F + K+ PD ++ ++ + A +K+I +
Sbjct: 476 QCYAKIQNVDCAEEAFRALSKT-GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVH 534
Query: 340 VGAPLLQLVVDKLVSESMLSEAKE-IVELGKTNR 372
L + + E M++EA++ IV++G+ R
Sbjct: 535 FDIELYKTAMRVYCKEGMVAEAQDLIVKMGREAR 568
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 97 GFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
G A L+TL +Q+ ++ + + NA++++Y +R+F
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ G DL+S+N++I F K ++ ESA + +M+++ V D+ T+ LL E
Sbjct: 264 LGGS----KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG---EAVEFLQEMEKKDVKPDLF 273
G+ L G + K L + NA L+ + ++ TG +A+ + ++ K DL
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNA-LISMYIQFPTGTMEDALSLFESLKSK----DLI 374
Query: 274 SLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
S N+II GF +G ++A K+F + SE D F+ L+
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N +L +Y+ +F E+P K D VS+NT+I + E A + M+
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMP-----KRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG 254
++G D +F+ LL G+ + RF+ GE++ G + ++ ++ + A ++
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 255 EAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIE-KSENDPDKNTFATL 313
+A E +E+ +P+ S NA+I GFV ++ A G +E K+ D TFA L
Sbjct: 154 DAFEAFKEIS----EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPL 209
Query: 314 VPFL 317
+ L
Sbjct: 210 LTLL 213
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +Y ++G + +R++F+ M +RN + S+N++L++Y +K V + I EI
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSY--TKLGYVDDAIGLLDEMEI 183
Query: 162 -SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
+KPD+V++N+++ + + + A+++L+ M+ G+ P + ++LL + G +
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 221 GEKLWGQMGGKNLSPD-------------------------------IRSYNARLLGLAV 249
G+ + G + L D I ++N+ + GL+
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 250 EKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNT 309
+A + MEK+ +KPD + N++ G+ G ++A G++++ P+ +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 310 FATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
+ + + G+ + A+ V ++ A + ++ L S+L KE+
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 44/253 (17%)
Query: 83 ILEHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYL 142
IL +Q Y + + LI +Y K+G AR +FD M +N
Sbjct: 251 ILRNQLWYDVYVE----TTLIDMYIKTGYLPYARMVFDMMDAKN---------------- 290
Query: 143 HSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
+V++N+++ + + + A +++ MEK G+ PD
Sbjct: 291 ------------------------IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
IT+N+L G G+ E+ + G+M K ++P++ S+ A G + A++ +
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
M+++ V P+ +++ ++K L K+ G + D LV + GD
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 323 LKTAIDVVKEIFN 335
L++AI++ I N
Sbjct: 447 LQSAIEIFWGIKN 459
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 119/266 (44%), Gaps = 15/266 (5%)
Query: 105 LYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVK 164
YG+ A ++FDEMP+R+ L++N ++ L S + +F+E+ +
Sbjct: 32 FYGRCVSLGFANKLFDEMPKRD----DLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKA 87
Query: 165 PDLVSYNTVIKAF--CKSK-VFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
D +T++K C +K F + + + G+ ++ N+L+ G+ E
Sbjct: 88 YD----STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELS 143
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K++ M +NLS S+N+ L +A+ L EME +KPD+ + N+++ G
Sbjct: 144 RKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSG 199
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVG 341
+ ++G +A ++ + P ++ ++L+ + E G LK + I +
Sbjct: 200 YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYD 259
Query: 342 APLLQLVVDKLVSESMLSEAKEIVEL 367
+ ++D + L A+ + ++
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDM 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
N+L+ Y + + + ++F + +L S+N+++ ++ K + A+ +L+EME
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDR-----NLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLA--VEKK 252
G+ PD++T+N+LL G ++G ++ + +M L P S ++ L +A K
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
G+A+ + + + D++ +I ++ G L A+ F ++ ++N N+ +
Sbjct: 243 LGKAIH--GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMDAKNIVAWNSLVS 299
Query: 313 LVPFLC 318
+ + C
Sbjct: 300 GLSYAC 305
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 24/203 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ Y + MP+ AR++FDEMP+RN ++S+N L++ Y+ + + ++F +P
Sbjct: 54 MVAGYFANLMPRDARKLFDEMPDRN----IISWNGLVSGYMKNGEIDEARKVFDLMP--- 106
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEE 220
+ ++VS+ ++K + + + A S+ +M EKN VS + +L G +GR ++
Sbjct: 107 --ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS-----WTVMLIGFLQDGRIDD 159
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
KL+ + K D + + + GL E + EA E EM ++ V + ++
Sbjct: 160 ACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVT 211
Query: 281 GFVNEGNLDEAKKWFGEI-EKSE 302
G+ +D+A+K F + EK+E
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKTE 234
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 36/240 (15%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
++T YG++ AR++FD MPE+ T +S+ ++L Y+ + + E +F+ +P
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 159 --------------GEISVKPDL---------VSYNTVIKAFCKSKVFESAVSMLEEMEK 195
GEI+ + S+ TVIK ++ A+ + M+K
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
GV P T ++L + G+++ Q+ D+ Y A +L + + K GE
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV--YVASVL-MTMYIKCGE 381
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS-ENDPDKNTF-ATL 313
V+ ++ K D+ N+II G+ + G +EA K F E+ S P++ TF ATL
Sbjct: 382 LVKSKLIFDRFPSK-DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+T+Y K G +++ +FD P ++ ++ +N++++ Y ++F E+P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKD----IIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDLITFNTLLDGLYAEGRFEE 220
S KP+ V++ + A + + E + + E ME GV P + ++D L GRF E
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF 259
++ M + PD + + LLG + EF
Sbjct: 488 AMEMIDSM---TVEPDAAVWGS-LLGACRTHSQLDVAEF 522
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 100 ARLITLYG--KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEV 157
AR ++G K G AR++FDEM ER +V+++ ++ Y + + +IF +
Sbjct: 174 ARTSMIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
P + V S+ +++ + ++ E A + E M V P +I N ++ GL +G
Sbjct: 230 PEKTEV-----SWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQKGE 280
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTG---EAVEFLQEMEKKDVKPDLFS 274
+ +++ M +N + S+ + + ++ G EA++ M+K+ V+P +
Sbjct: 281 IAKARRVFDSMKERNDA----SWQTVI---KIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDL 323
L +I+ + +L K+ ++ + + D D + L+ + G+L
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ LY + G+ A+ +FD + RN +S+NAL+A + +F+ + +
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRN----DVSWNALIAGHARRSGTEKALELFQGMLRD- 256
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+P SY ++ A + E + M K+G NTLLD G +
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
K++ ++ + D+ S+N+ L A EAV + +EM + ++P+ S +++
Sbjct: 317 RKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G LDE ++ ++K P+ + T+V L GDL A+ ++E+
Sbjct: 373 CSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 13/248 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS-KQYRVVERIFKEVPGE 160
LI +YG+ G K A +FD M E+N V+S+N+++AAY+ + K Y +E +F+E+ +
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKN----VISWNSIIAAYVQNGKNYSALE-LFQEL-WD 424
Query: 161 ISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEE 220
S+ PD + +++ A+ +S + + K+ + I N+L+ G E+
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
K + + L D+ S+N+ ++ AV +V EM V P+ + +++
Sbjct: 485 ARKCFNHI----LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 281 GFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI-FNTRC 338
G +DE ++F +++ DP + ++ + G+ A ++E+ F
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 339 RVGAPLLQ 346
R+ LL
Sbjct: 601 RIWGSLLN 608
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 14/226 (6%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ +Y K G A ++F+ M +RN ++++N ++ Y + + F+++ +
Sbjct: 273 ILDMYSKYGEVSYAERIFNGMIQRN----IVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
++PD++ T I S + E M + G P ++ L+D +Y E G+ +
Sbjct: 329 GLQPDVI---TSINLLPASAILEGRTIHGYAMRR-GFLPHMVLETALID-MYGECGQLKS 383
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
E ++ +M KN + S+N+ + K A+E QE+ + PD ++ +I+
Sbjct: 384 AEVIFDRMAEKN----VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTA 326
+ +L E ++ I KS + +LV GDL+ A
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 18/213 (8%)
Query: 128 TRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAV 187
T V+ ++L Y + ERIF + ++ ++V++N +I + ++ A
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGM-----IQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 188 SMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNA--RL 244
++M E+NG+ PD+IT LL EG + G + P + A +
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
G + K+ E + M +K+V S N+II +V G A + F E+ S
Sbjct: 375 YGECGQLKSAEVI--FDRMAEKNV----ISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTR 337
PD T A+++P E L ++ I +R
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 170 YNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMG 229
+N +++AFC + + A S+ E++ +PD+ T N LL G G E + +M
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 230 GKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLD 289
+ P+ +Y R+ G ++ GEA+ ++M++ D + L +I G N
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 290 EAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+A++ F EI K PD + L+ L + GD+ AI V+KE+
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 113 KRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNT 172
K AR +F+++ R V + N LL + + E + E+ KP+ V+Y
Sbjct: 193 KEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKR-GFKPNSVTYGI 250
Query: 173 VIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKN 232
I FCK + F A+ + E+M++ + TL+ G + +L+ ++ +
Sbjct: 251 RIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRG 310
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV--NEGNLDE 290
L+PD +YNA + L A++ ++EME+K ++PD + +++ G + E +
Sbjct: 311 LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNG 370
Query: 291 AKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVD 350
+++ ++++ P T L+ C G++ +D+ K + L+L+
Sbjct: 371 VCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Query: 351 KLVSESMLSEAKE 363
L + ++A E
Sbjct: 431 ALCARRRANDAFE 443
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 20/241 (8%)
Query: 90 YSDFSKEGFSA------RLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+S F + GF + LIT Y K G AR++FDEM +R+ V +NA++ Y
Sbjct: 105 HSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRD----VPVWNAMITGYQR 160
Query: 144 SKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKN-GVSPDL 202
+ +F +P + ++ S+ TVI F ++ + A+ M MEK+ V P+
Sbjct: 161 RGDMKAAMELFDSMP-----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNH 215
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
IT ++L G E G +L G +I NA + + K G +
Sbjct: 216 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNAT---IEMYSKCGMIDVAKRL 272
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
E+ + +L S N++I G DEA F ++ + PD TF L+ C G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL-LACVHGG 331
Query: 323 L 323
+
Sbjct: 332 M 332
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT Y + G K A ++FD MP +N T S+ +++ + + Y ++F + +
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVT----SWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SVKP+ ++ +V+ A E + +NG ++ N ++ G +
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++L+ ++G + ++ S+N+ + LA K EA+ +M ++ KPD + ++
Sbjct: 270 KRLFEELGNQR---NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 282 FVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
V+ G + + ++ F +E+ P + ++ L G L+ A D++K +
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM 379
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 56/314 (17%)
Query: 62 GIYEDTVRRLAGAKQFRGVIDILEHQKQYSDFSKEGF------SARLITLYGKSGMPKRA 115
G+Y D K + ++E +K + K G S L+ +Y G +
Sbjct: 41 GLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEIT 100
Query: 116 RQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPD---LVSY-- 170
++FDEMP+R+ V+S+N L+++Y+ + ++ +FK + E ++K D +VS
Sbjct: 101 HKVFDEMPQRD----VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLS 156
Query: 171 -----------------------------NTVIKAFCKSKVFESAVSMLEEMEKNGVSPD 201
N ++ FCK + A ++ + M V
Sbjct: 157 ACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK-- 214
Query: 202 LITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSP--DIRSYNARLLGLAVEKKTGEAVEF 259
+ +++ G + GR +E L+ + SP D+ + A + G + EA+E
Sbjct: 215 --CWTSMVFGYVSTGRIDEARVLFER------SPVKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 260 LQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCE 319
+ M+ ++PD F L +++ G G L++ K G I ++ DK LV +
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 320 KGDLKTAIDVVKEI 333
G ++TA++V EI
Sbjct: 327 CGCIETALEVFYEI 340
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ ++ K G +AR +FD M ++N V + +++ Y+ + + +F+ P
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKN----VKCWTSMVFGYVSTGRIDEARVLFERSP--- 240
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
VK D+V + ++ + + F+ A+ + M+ G+ PD +LL G G E+G
Sbjct: 241 -VK-DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 222 EKLWGQMGGKNLSP-------------------------------DIRSYNARLLGLAVE 250
+ + G + ++ D S+ + + GLA+
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 251 KKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNT 309
+G A++ EME V+ D + A++ + G + E +K F + + N P
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 310 FATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ LC G L A +++ ++
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKM 442
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I+ Y +G+ K A+++FD MP R V+S+NA++ AY H Y V +F ++ +
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMP----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
+ KPD + +V+ A + ++K+G+ + L+D G+ ++
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ + D+ ++N+ + L+V +A+E EM + KP+ + ++
Sbjct: 359 LEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 282 FVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G LD+A+K F + +P + +V L G ++ A ++V EI
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
P+ ++N+VI+A+ S E A+++ EM V PD +F +L A FEEG +
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ G L D+ N + V ++G + +++ V+ D S N+++ ++
Sbjct: 162 IHGLFIKSGLVTDVFVENTL---VNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSAYL 217
Query: 284 NEGNLDEAKKWFGEIEK 300
+G +DEA+ F E+E+
Sbjct: 218 EKGLVDEARALFDEMEE 234
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 132 LSFNALLAAYLHSKQYRVVERIFKEV---PGEISVKPDLVSYNTVIKAFCKSKVFESAVS 188
+ N+++ AY +S V +F+E+ P V PD S+ V+KA FE
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGP----VFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 189 MLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLA 248
+ K+G+ D+ NTL++ G FE K+ +M + D S+N+ L
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYL 217
Query: 249 VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWF 295
+ EA EME+++V+ S N +I G+ G + EAK+ F
Sbjct: 218 EKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVF 260
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 10/234 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
++ Y K+G + AR MFD+MP + V+++ ++A Y + +R+ ++
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS- 309
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
+K D + +++ A +S + + + ++++ + + N LLD +YA+ G ++
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD-MYAKCGNLKK 368
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
++ + K D+ S+N L GL V EA+E M ++ ++PD + A++
Sbjct: 369 AFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 281 GFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G +DE +F +EK + P + LV L G LK AI VV+ +
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
K+G + AR++FDEMP+R+ ++S+N +L Y ++ +F+++P + +
Sbjct: 197 KAGELRDARRLFDEMPQRD----LISWNTMLDGYARCREMSKAFELFEKMP-----ERNT 247
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
VS++T++ + K+ E A M ++M + +++T+ ++ G +G +E ++L Q
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M L D + + L + +++ ++ + + LNA++ + GN
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 288 LDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDV 329
L +A F +I K D ++ T++ L G K AI++
Sbjct: 366 LKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIEL 403
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y + G K AR FD+MP R +S+ ++ YL + + IF+E+ + P
Sbjct: 312 YVERGNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSA-GMIP 366
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLW 225
D + +V+ A E + ++KN + D++ N L+D + G E+ +K++
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 226 GQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNE 285
M + D ++ A ++GLA + EA++ +M+ ++PD + ++ +
Sbjct: 427 HDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS 482
Query: 286 GNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI-FNTRCRVGAP 343
G +D+A+K+F ++ +P + +V L G +K A ++++++ N V
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGA 542
Query: 344 LLQLVVDKLVSESMLSE--AKEIVELGKTN 371
LL +L ++ ++E AK+I+EL N
Sbjct: 543 LLG--ASRLHNDEPMAELAAKKILELEPDN 570
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 164 KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEK 223
K D+ S+N +I + + K +E ++ +L EME+N VSP +T +L + ++
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 224 LWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFV 283
+ + P +R NA + A + AV + M+ +DV S +I+KG+V
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV----ISWTSIVKGYV 313
Query: 284 NEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
GNL A+ +F ++ D+ ++ ++ G ++++ +E+
Sbjct: 314 ERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREM 359
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 3/243 (1%)
Query: 130 TVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSM 189
T+ +FN L++ S+ + + V E + D Y T+I + KS ++ +
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQ-ESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 190 LEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
+M +GV +L TF L+DG G+ + +G + KN+ PD +NA +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 250 EKKTGEAVEFLQEM--EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDK 307
A + L EM E + PD S+ A++K N G ++ AK+ + I K
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 308 NTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVEL 367
+ V + GD A + K++ ++D ML EA I++
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 368 GKT 370
K+
Sbjct: 705 AKS 707
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Query: 145 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLIT 204
K+ R V+ F+ ++ + P + ++N ++ S+ E A +L ++++G++ D
Sbjct: 447 KKQRAVKEAFRFT--KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKL 504
Query: 205 FNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEME 264
+ TL+ G+ + +++ QM + ++ ++ A + G A + +A +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 265 KKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI--EKSENDPDKNTFATLVPFLCEKGD 322
K+VKPD NA+I G +D A E+ E DPD + L+ C G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 323 LKTAIDVVKEIFNTRCRVGAP 343
++ A +V + I R G P
Sbjct: 625 VERAKEVYQMIHKYGIR-GTP 644
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 106/251 (42%), Gaps = 7/251 (2%)
Query: 90 YSDFSKEGFSARLITL------YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLH 143
+ S G A L T ++G +A + + +N + FNAL++A
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 144 SKQYRVVERIFKEVPGEIS-VKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDL 202
S + E+ E + PD +S ++KA C + E A + + + K G+
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 203 ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQE 262
+ ++ G ++ ++ M K+++PD ++A + K EA LQ+
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 263 MEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGD 322
+ + ++ S ++++ N + +A + + +I+ + P +T L+ LCE
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 323 LKTAIDVVKEI 333
L A++ + EI
Sbjct: 765 LPKAMEYLDEI 775
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 96 EGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFK 155
E F + LI + G + M A + + + +S+++L+ A ++K ++ +++
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
++ I ++P + + N +I A C+ A+ L+E++ G+ P+ IT++ L+ +
Sbjct: 739 KIK-SIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERK 797
Query: 216 GRFEEGEKLWGQMGGKNLSPDI 237
FE KL Q G +SP++
Sbjct: 798 DDFEVSFKLLSQAKGDGVSPNL 819
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTV----LSFNALLAAYLHSKQYRVVERIFKEV 157
LI+ G+SG RA + EM T + +S AL+ A ++ Q + +++ +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAE--THPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Query: 158 PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGR 217
+ ++ Y + + KS ++ A S+ ++M++ V+PD + F+ L+D
Sbjct: 636 -HKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
+E + + + SY++ + K +A+E ++++ ++P + ++NA
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
+I L +A ++ EI+ P+ T++ L+
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 108 KSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDL 167
KSG A ++ +M E++ T + F+AL+ H+K I ++ + ++
Sbjct: 656 KSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ-GIRLGT 714
Query: 168 VSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
+SY++++ A C +K ++ A+ + E+++ + P + T N L+ L + + + +
Sbjct: 715 ISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDE 774
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEF--LQEMEKKDVKPDLFSLNAI 278
+ L P+ +Y+ +L LA E+K V F L + + V P+L I
Sbjct: 775 IKTLGLKPNTITYS--MLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEV--PGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLE 191
N++L A +H + R+F E+ PG I V D +SY T++K K++ + A MLE
Sbjct: 80 MNSVLEACVHCGNIDLALRMFHEMAEPGGIGV--DSISYATILKGLGKARRIDEAFQMLE 137
Query: 192 EMEKNGV--SPDLIT--FNTLLDGLYAEGRFEEGEKLWGQMGGKNL---SPDIRSYNARL 244
+E +P L + LLD L G L + L +P + YN +
Sbjct: 138 TIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLM 197
Query: 245 LGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEI-EKSEN 303
G + A+ L EM + ++PD + N +I + G+LD A K+F ++ EK+E
Sbjct: 198 KGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEE 257
Query: 304 ------DPDKNTFATLVPFLCEKGDLKTAIDVVKEIF 334
PD T+ TLV + DL + ++EIF
Sbjct: 258 YYDDFLQPDVVTYTTLVKGFGDATDLLS----LQEIF 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 165 PDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
P ++ YN ++K + S+ ++A+++L+EM + + PD +T+NTL+ G + K
Sbjct: 188 PSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKF 247
Query: 225 WGQMGGKN-------LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK-KDVKPDLFSLN 276
+ M K L PD+ +Y + G E EM+ ++V D +
Sbjct: 248 FNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFT 307
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSEND-----PDKNTFATLVPFLCEKGD 322
A++ + G+ A FGEI K P + + +++ +GD
Sbjct: 308 AVVDAMLKCGSTSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGD 358
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 19/240 (7%)
Query: 99 SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP 158
S L+ +Y K G + ARQ+FD M ERN V+S+N+++ AY+ ++ + IF+++
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERN----VVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRF 218
E VKP VS + A E + + + G+ ++ N+L+
Sbjct: 330 DE-GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 219 EEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAI 278
+ ++G++ + L S+NA +LG A + +A+ + +M + VKPD F+ ++
Sbjct: 389 DTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSV 444
Query: 279 IKGFVNEGNLDEAKKWF-GEIEKSENDPDKNTFAT--LVPFLCEKGDLKTAIDVVKEIFN 335
I + E ++ KW G + +S DKN F T LV + G AI + + IF+
Sbjct: 445 ITA-IAELSITHHAKWIHGVVMRS--CLDKNVFVTTALVDMYAKCG----AIMIARLIFD 497
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 95 KEGFSARLITLYGKSGMPKRARQM------FDEMPERNCTRTVLSFNALLAAYLHSKQYR 148
K GFS L + G M + RQ+ FD MPER+ ++S+N ++A Y + R
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD----LVSWNTIVAGYSQNGMAR 218
Query: 149 VVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTL 208
+ + K + E ++KP ++ +V+ A ++ + ++G L+ +T
Sbjct: 219 MALEMVKSMCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD-SLVNISTA 276
Query: 209 LDGLYAE-GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKD 267
L +YA+ G E +L+ M L ++ S+N+ + + EA+ Q+M +
Sbjct: 277 LVDMYAKCGSLETARQLFDGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 268 VKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKN--TFATLVPFLCEKGDLKT 325
VKP S+ + + G+L+ + F E D+N +L+ C+ ++ T
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGR--FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 326 A 326
A
Sbjct: 391 A 391
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 110/234 (47%), Gaps = 12/234 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI++Y K A MF ++ +RT++S+NA++ + + + F ++
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQ----SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR- 432
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
+VKPD +Y +VI A + + A + + ++ + ++ L+D +YA+ G
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD-MYAKCGAIMI 491
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
++ M ++++ ++NA + G A+E +EM+K +KP+ + ++I
Sbjct: 492 ARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 281 GFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G ++ K F ++++ + + + + +V L G L A D + ++
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I + K G+ +A+ +FDEMP+RN +S+N++++ ++ + +++ +F+E+ E
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRN----GVSWNSMISGFVRNGRFKDALDMFREMQ-EK 252
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
VKPD + +++ A E + E + +N + I L+D G EEG
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++ K LS +N+ +LGLA A++ E+E+ ++PD S ++
Sbjct: 313 LNVFECAPKKQLS----CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 282 FVNEGNLDEAKKWFGEI-EKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRV 340
+ G + A ++F + EK +P + +V L G L+ A ++K +
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM------- 421
Query: 341 GAPLLQLVVDKLVSESMLSEAKEI--VELGK 369
P+ + D ++ S+LS ++I VE+ K
Sbjct: 422 --PVEE---DTVIWSSLLSACRKIGNVEMAK 447
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 44/254 (17%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
YG+ G + RQ+ + + N +L Y+ RIF + G
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----- 190
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGRFEEGEKL 224
D+V++N++I F K + + A ++ +EM ++NGVS +N+++ G GRF++ +
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVS-----WNSMISGFVRNGRFKDALDM 245
Query: 225 WGQMGGKNLSPD----------------------IRSYNAR----LLGLAVEK------K 252
+ +M K++ PD I Y R L + V K
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
G E L E K L N++I G N G + A F E+E+S +PD +F
Sbjct: 306 CGCIEEGLNVFECAP-KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIG 364
Query: 313 LVPFLCEKGDLKTA 326
++ G++ A
Sbjct: 365 VLTACAHSGEVHRA 378
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
SVKP ++Y +V KA+ + + + K G+ D NT+L G E
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
+++ M G D+ ++N+ ++G A +A EM +++ S N++I G
Sbjct: 181 WRIFLGMIGF----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG----VSWNSMISG 232
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATLV 314
FV G +A F E+++ + PD T +L+
Sbjct: 233 FVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 49/268 (18%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
LI +Y K A ++FDEM ER+ V+S+N+LL+ Y Q + + +F +
Sbjct: 150 LIDMYMKFDDLVDAHKVFDEMYERD----VISWNSLLSGYARLGQMKKAKGLF-----HL 200
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDG---------- 211
+ +VS+ +I + + A+ EM+ G+ PD I+ ++L
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 212 ----LYAE---------------------GRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
LYAE G + +L+GQM GK D+ S++ + G
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK----DVISWSTMISG 316
Query: 247 LAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKS-ENDP 305
A A+E EM++ VKP+ + ++ + G E ++F + + + +P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ L+ L G L+ A+++ K +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTM 404
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 135 NALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEME 194
NAL+ Y ++F ++ G+ D++S++T+I + A+ EM+
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGK-----DVISWSTMISGYAYHGNAHGAIETFNEMQ 334
Query: 195 KNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQM-GGKNLSPDIRSYNARLLGLAVEKKT 253
+ V P+ ITF LL G ++EG + + M + P I Y + LA K
Sbjct: 335 RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEA 291
AVE + M +KPD +++ GNLD A
Sbjct: 395 ERAVEITKTMP---MKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
A ++F+++ N V +N+++ AY H+ Y V RI+K++ + PD ++ +
Sbjct: 61 ATRLFNQVSNPN----VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLS 234
K+ + + K G ++T N L+D + K++ +M +
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER--- 173
Query: 235 PDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKW 294
D+ S+N+ L G A + +A M K + S A+I G+ G EA +
Sbjct: 174 -DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI----VSWTAMISGYTGIGCYVEAMDF 228
Query: 295 FGEIEKSENDPDKNTFATLVPFLCEKGDLK 324
F E++ + +PD+ + +++P + G L+
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLE 258
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 34/246 (13%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVP--- 158
+I Y K G AR +FD+M +R+ +S+N ++ Y+H + +F E+P
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRD----TISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 159 ---------GEISV--------------KPDLVSYNTVIKAFCKSKVFESAVSMLEEMEK 195
G SV + VS+N++I A+ K+K ++ AV + M
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 196 NGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGE 255
G PD T +LL G ++ Q+ K + PD+ +NA + + + GE
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVHNALI---TMYSRCGE 458
Query: 256 AVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
+E + ++ +K ++ + NA+I G+ GN EA FG ++ + P TF +++
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 316 FLCEKG 321
G
Sbjct: 519 ACAHAG 524
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVE---RIFKEVP 158
+I+ Y K +AR++FD MP+R+ V+++N +++ Y+ R +E ++F E+P
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRD----VVTWNTMISGYVSCGGIRFLEEARKLFDEMP 132
Query: 159 GEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM-EKNGVSPDLITFNTLLDGLYAEGR 217
D S+NT+I + K++ A+ + E+M E+N VS ++ ++ G G
Sbjct: 133 SR-----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS-----WSAMITGFCQNGE 182
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFL-QEMEKKDVKPDL-FSL 275
+ L+ +M K+ SP A + GL ++ EA L Q + DL ++
Sbjct: 183 VDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAY 238
Query: 276 NAIIKGFVNEGNLDEAKKWFGEI 298
N +I G+ G ++ A+ F +I
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQI 261
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 115 ARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVI 174
AR++FDEMP R+ S+N +++ Y +++ +F+++P + + VS++ +I
Sbjct: 124 ARKLFDEMPSRDS----FSWNTMISGYAKNRRIGEALLLFEKMP-----ERNAVSWSAMI 174
Query: 175 KAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGG--KN 232
FC++ +SAV + +M SP L+ GL R E + GQ G
Sbjct: 175 TGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSG 230
Query: 233 LSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDL-----------------FSL 275
+ +YN ++G ++ EA L D PDL S
Sbjct: 231 REDLVYAYNTLIVGYG-QRGQVEAARCL-----FDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
N++IK ++ G++ A+ F +++ D D ++ T++ ++ A + E+ N
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
FN L Y++ R + + K V PD N +IKA+ K + A+ + +EM
Sbjct: 194 FNKLNVCYVYLHAVRSLTKQMKSN----GVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM 249
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKT 253
G P+ T++ L+ G+ +GR +G + +M K + P+ Y + L++E++
Sbjct: 250 ALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRL 309
Query: 254 GEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
EAVE + +M + PD+ + N ++ G EA + E +K + + + TL
Sbjct: 310 DEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTL 369
Query: 314 V 314
+
Sbjct: 370 M 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 164 KPDLVSYNTVI----KAFCKSKV----FESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
KPDL +Y ++ K F K V + S+ ++M+ NGV PD N ++
Sbjct: 177 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKC 236
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
+E +++ +M P+ +Y+ + G+ + + G+ + F +EM+ K + P+
Sbjct: 237 LEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCY 296
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
+I E LDEA + ++ + PD T+ T++ LC G A+++V+E
Sbjct: 297 MVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 14/225 (6%)
Query: 153 IFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGL 212
IF+ + K + +Y+T+IK K +++EE+ + +N ++
Sbjct: 94 IFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIR-- 151
Query: 213 YAEGR---FEEGEKLWGQMGGKNLS-PDIRSYNA-------RLLGLAVEKKTGEAVEFL- 260
+ GR F ++ +M + S PD+ +Y R L V AV L
Sbjct: 152 FCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLT 211
Query: 261 QEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEK 320
++M+ V PD F LN IIK + +DEA + F E+ ++P+ T++ LV +CEK
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 321 GDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIV 365
G + + KE+ +++ L E L EA E+V
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 316
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ + EM + G+ + +T+ TL+ GL+ G + ++++ +M + PDI +YN L G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 247 LA---------VEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGE 297
L V K + + + K VKP++ + +I GF +G +EA F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 298 IEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKL 352
+++ PD T+ TL+ GD + +++KE+ + R A LV D L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 117 QMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKA 176
++F EM +R +++ L+ + + + IFKE+ + V PD+++YN ++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPDIMTYNILLDG 60
Query: 177 FCKSKVFESAV---------SMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQ 227
CK+ E A+ + + GV P+++T+ T++ G +G EE L+ +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 228 MGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGN 287
M PD +YN + + + E ++EM D S ++ +++G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA-STYGLVTDMLHDGR 179
Query: 288 LDEA 291
LD+
Sbjct: 180 LDKG 183
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
+V E ++ D YN +I CK+ F+ A ++ + +G+ PD+ T+N ++ +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSL 61
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
GR EKL+ +M + L PD +YN+ + GL + K +A + V +
Sbjct: 62 GR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTF 109
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFN 335
N +I G+ + + F E+ + + T+ TL+ + GD TA+D+ +E+ +
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 336 TRCRVGAPLLQLVVDKLVSESMLSEA 361
+ + ++ +L S L +A
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKA 195
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+++Y SG A ++FDE+P+R +V+++ AL + Y S ++R +FK++ E+
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAIDLFKKMV-EM 206
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
VKPD V+ A +S +++ ME+ + + TL++ LYA+ G+ E+
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN-LYAKCGKMEK 265
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIK 280
++ M + DI +++ + G A E +E +M ++++KPD FS+ +
Sbjct: 266 ARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 281 GFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ G LD + I++ E + L+ + G + +V KE+
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L+ LY K G ++AR +FD M E++ +++++ ++ Y + + +F ++ E
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKD----IVTWSTMIQGYASNSFPKEGIELFLQMLQE- 307
Query: 162 SVKPD---LVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GR 217
++KPD +V + + + + E +S+++ E +L N L+D +YA+ G
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE---FLTNLFMANALID-MYAKCGA 363
Query: 218 FEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNA 277
G +++ +M K DI NA + GLA + + EK + PD +
Sbjct: 364 MARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 278 IIKGFVNEGNLDEAKKWFGEI 298
++ G V+ G + + ++F I
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAI 440
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 138/298 (46%), Gaps = 32/298 (10%)
Query: 59 TKTGIYEDTVR--RLAGAKQ--------------FRGVIDILEHQKQYSDFSKEGF---- 98
++G+YED +R R G F +D+++ ++ + ++G
Sbjct: 218 AQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDV 277
Query: 99 --SARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKE 156
+ L+ +Y KS + + ++F + R+ +S+N+L+A Y+ + +Y R+F++
Sbjct: 278 YIGSSLVDMYAKSARIEDSERVFSRLYCRDG----ISWNSLVAGYVQNGRYNEALRLFRQ 333
Query: 157 VPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEG 216
+ VKP V++++VI A + + + G ++ + L+D G
Sbjct: 334 MV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 217 RFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLN 276
+ K++ +M N+ ++ S+ A ++G A+ EAV +EM+++ VKP+ +
Sbjct: 393 NIKAARKIFDRM---NVLDEV-SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 448
Query: 277 AIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
A++ + G +DEA +F + K + + +A + L G L+ A + + ++
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 102 LITLYGKS-GMPKRAR--QMFDEMPERNCTRT---VLSFNALLAAYLHSKQYRVVERIFK 155
L+ +Y K GM + +FDEMP+R V + ++ + S V R+F+
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS-----VRRVFE 200
Query: 156 EVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE 215
+P + D+VSYNT+I + +S ++E A+ M+ EM + PD T +++L
Sbjct: 201 VMP-----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 216 GRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSL 275
+G+++ G + K + D+ ++ + A + ++ + +D S
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG----ISW 311
Query: 276 NAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVP 315
N+++ G+V G +EA + F ++ ++ P F++++P
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 133 SFNALLAAY-----LHSKQYRV--VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFES 185
SFNA ++ Y +H+K+ + VERI K++ + + PD+++ ++ + KS FE
Sbjct: 379 SFNASISDYSKLIHIHAKENHIEDVERILKKM-SQNGIFPDILTATALVHMYSKSGNFER 437
Query: 186 AVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLL 245
A E ++ G+ PD + ++ G G+ + GE+L +M K L Y A L
Sbjct: 438 ATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLR 497
Query: 246 GLAVEKKTGEAVEFLQEMEKKDVKPDLF-SLNAIIKGFVNEGNLDEAKKWFGEIEKSEND 304
A A M+ P F + + ++ + G +D+AK F E+ K +
Sbjct: 498 AYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHK 557
Query: 305 PDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEI 364
PD A LV + L A+ ++ ++ +G ++VD + + ++ EA+++
Sbjct: 558 PDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQL 617
Query: 365 V 365
+
Sbjct: 618 L 618
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 150 VERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLL 209
V+ + K + GE P+ + +++ C++ A ++ M +G+S + ++ L+
Sbjct: 196 VKIVLKRMIGE-GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLV 254
Query: 210 DGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVK 269
G + G ++ L+ +M SP++ +Y + + G EA L +++ + +
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 270 PDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKG 321
PD+ N +I + G +EA+K F +EK + PD+ TFA+++ LC G
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 100 ARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPG 159
+++ L ++G A Q+ M + +V ++ L++ + S + + +F ++
Sbjct: 216 GQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI- 274
Query: 160 EISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE 219
+I P+LV+Y ++IK F + + A ++L +++ G++PD++ N ++ GRFE
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 220 EGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAII 279
E K++ + + L PD ++ + L L + K + V + D DL + N +
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF-DLVPRITHGIGTDF--DLVTGNLLS 391
Query: 280 KGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKEIFNTRCR 339
F G A K + + D T+ + LC G + AI + K I +
Sbjct: 392 NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Query: 340 VGAPLLQLVVDKLVSESMLSEAKEIVELGKTN 371
+ A ++D L +ELGK N
Sbjct: 452 LDAHFHSAIIDSL------------IELGKYN 471
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 118/298 (39%), Gaps = 68/298 (22%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
L++ + +SG P++A +F++M + C+ ++++ +L+ ++ + +V E
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSE- 311
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFE-- 219
+ PD+V N +I + + FE A + +EK + PD TF ++L L G+F+
Sbjct: 312 GLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLV 371
Query: 220 ------------------------------EGEKLWGQMGGKNLSPDIRSYNARLLGLAV 249
K+ M K+ + D +Y L L
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 250 ----------------EKKTGEA------VEFLQEMEKKDVKPDLF-------------S 274
EKK +A ++ L E+ K + LF S
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS 491
Query: 275 LNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKTAIDVVKE 332
IKG V ++EA ++++ P++ T+ T++ LC++ + + +++E
Sbjct: 492 YTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+++ Y +SG A +F++MPER+ V S+NA+LAA + + +F+ + E
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERD----VPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAE-GRFEE 220
S++P+ V+ V+ A ++ + A + + +S D+ N+L+D LY + G EE
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD-LYGKCGNLEE 313
Query: 221 GEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEK---KDVKPDLFSLNA 277
++ K+L+ ++N+ + A+ ++ EA+ +EM K D+KPD +
Sbjct: 314 ASSVFKMASKKSLT----AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 278 IIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVPFLCEKGDLKTAIDVVKEI 333
++ + G + + + +F + +P + L+ L G A++V+ +
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 106 YGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKP 165
Y K G A ++FDEMP ++ +++N ++ L K+ +F +
Sbjct: 188 YAKRGKIDEAMRLFDEMPYKD----QVAWNVMITGCLKCKEMDSARELFDRF-----TEK 238
Query: 166 DLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKL- 224
D+V++N +I + + A+ + +EM G PD++T +LL G E G++L
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 225 -------------------WGQM------------------GGKNLSPDIRSYNARLLGL 247
W + G K+ D+ ++N ++GL
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD--RDLSTWNTLIVGL 356
Query: 248 AVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPD 306
A+ G ++E +EM++ V P+ + +I + G +DE +K+F + N +P+
Sbjct: 357 ALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 307 KNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ +V L G L+ A V+ +
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESM 442
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 13/241 (5%)
Query: 134 FNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVSYNTVIKAFCKSKVFESAVSMLEEM 193
+NAL+ Y +F+ V DL ++NT+I E ++ M EEM
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDR-----DLSTWNTLIVGLALHHA-EGSIEMFEEM 371
Query: 194 EKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGK-NLSPDIRSYNARLLGLAVEKK 252
++ V P+ +TF ++ GR +EG K + M N+ P+I+ Y + L +
Sbjct: 372 QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQ 431
Query: 253 TGEAVEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFAT 312
EA F++ M+ ++P+ ++ GN+ E K+ E S + +
Sbjct: 432 LEEAFMFVESMK---IEPNAIVWRTLLGACKIYGNV-ELGKYANEKLLSMRKDESGDYVL 487
Query: 313 LVPFLCEKGDLKTAIDVVKEIFNTRCR--VGAPLLQLVVDKLVSESMLSEAKEIVELGKT 370
L G V K +TR + G L++ DKL+ +LS E G+
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSRGRI 547
Query: 371 N 371
N
Sbjct: 548 N 548
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 49/291 (16%)
Query: 110 GMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEISVKPDLVS 169
G K A ++FDE+P+ + V N +L S + ++ E+ V PD +
Sbjct: 60 GALKYAHKLFDEIPKPD----VSICNHVLRGSAQSMKPEKTVSLYTEMEKR-GVSPDRYT 114
Query: 170 YNTVIKAFCKSK------VFESAVS----MLEEMEKN------------GVSPDL----- 202
+ V+KA K + F V +L E KN G++ +L
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 203 ----ITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVE 258
+ ++++ G G+ +E +L+ +M K D ++N + G K+ A E
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARE 230
Query: 259 FLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLC 318
+KDV + NA+I G+VN G EA F E+ + PD T +L+
Sbjct: 231 LFDRFTEKDV----VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 319 EKGDLKTAIDVVKEIFNT-----RCRVGAPLLQLVVDKLVSESMLSEAKEI 364
GDL+T + I T VG P+ ++D + A E+
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV 337
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+I+ Y + G ARQ+FD MP+RN V+S+N+L+A Y H+ Q + F+++
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRN----VVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 162 SVKPDLVSYNTVIKAFCKSKVFESAVSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEG 221
KPD V+ +V+ A E +++ + KN + + + +L+ G E
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 222 EKLWGQMGGKNLSPDIRSYNARLLGLAVEKKTGEAVEFLQEMEKKDVKPDLFSLNAIIKG 281
++++ +M + D+ SYN A E + L +M+ + ++PD + +++
Sbjct: 453 KRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 282 FVNEGNLDEAKKWFGEIEKSENDPDKNTFATL 313
G L E ++ F KS +P + +A +
Sbjct: 509 CNRAGLLKEGQRIF----KSIRNPLADHYACM 536
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 48/268 (17%)
Query: 102 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHSKQYRVVERIFKEVPGEI 161
+IT + K + AR+ FD MPE ++V+S+NA+L+ Y + R+F ++ +
Sbjct: 204 MITGFAKVKDLENARKYFDRMPE----KSVVSWNAMLSGYAQNGFTEDALRLFNDML-RL 258
Query: 162 SVKPDLVSYNTVIKA--------------------------FCKSKVF---------ESA 186
V+P+ ++ VI A F K+ + +SA
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 187 VSMLEEMEKNGVSPDLITFNTLLDGLYAEGRFEEGEKLWGQMGGKNLSPDIRSYNARLLG 246
+ E+ G +L+T+N ++ G G +L+ M +N + S+N+ + G
Sbjct: 319 RRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN----VVSWNSLIAG 371
Query: 247 LAVEKKTGEAVEFLQEM-EKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDP 305
A + A+EF ++M + D KPD ++ +++ + +L+ I K++
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 306 DKNTFATLVPFLCEKGDLKTAIDVVKEI 333
+ + + +L+ G+L A V E+
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEM 459