Miyakogusa Predicted Gene
- Lj4g3v0423120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0423120.1 Non Chatacterized Hit- tr|D8S2E1|D8S2E1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.05,2e-17,ZF_FYVE,Zinc finger, FYVE-related; seg,NULL;
FYVE,Zinc finger, FYVE-type; ZINC FINGER FYVE DOMAIN CO,CUFF.47118.1
(710 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61690.1 | Symbols: | phosphoinositide binding | chr1:227828... 539 e-153
AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 63 9e-10
AT3G14270.1 | Symbols: FAB1B | phosphatidylinositol-4-phosphate ... 57 6e-08
AT3G43230.1 | Symbols: | RING/FYVE/PHD-type zinc finger family ... 55 2e-07
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 54 4e-07
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 53 6e-07
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 52 1e-06
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 52 1e-06
>AT1G61690.1 | Symbols: | phosphoinositide binding |
chr1:22782825-22786782 REVERSE LENGTH=1171
Length = 1171
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 327/720 (45%), Positives = 439/720 (60%), Gaps = 61/720 (8%)
Query: 1 MLEKIGLPPKPSLRGNNWVVDASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQRMYLR 60
MLEKIGLPPKPSLRGN+WVVDAS+CQGC +QFTFINRKHHCRRCGGLFC +CT QR+ LR
Sbjct: 1 MLEKIGLPPKPSLRGNSWVVDASHCQGCSSQFTFINRKHHCRRCGGLFCGTCTQQRLSLR 60
Query: 61 GQGDSPVRICDPCKKLEEAARFEMRQG--RRAGRGGSLKSAPRDEDEVLNQILGQSEELL 118
GQGDSPVRIC+PCKK+EEAARFE+R G RA +GGS K ++ED+VL++ILG ++
Sbjct: 61 GQGDSPVRICEPCKKIEEAARFELRHGYKNRAAKGGSSKRTVKNEDDVLSEILGSDVDVS 120
Query: 119 SSGKQSASEKDSPTQRPVGIASSSSTKVFSNHDDGDIQKIVSNEIPNNLGIDVESSSPDE 178
SS + +S + ++ +ASSSS K G++++ +SP+E
Sbjct: 121 SSSESVSSTDRNASKE---MASSSSNK----------------------GMELD-ASPEE 154
Query: 179 LRQQAVEEXXXXXXXXXXXXPEEALKAFKRGKELERQADALEVHLRKIRKKVLPSGGLPD 238
LR+QAVE +EALKAFKRG+ELER+ADALE+ LR+ RK+ L + +
Sbjct: 155 LRKQAVEAKNKYRILKGEGKSDEALKAFKRGRELEREADALEISLRRNRKRELSMRNVAE 214
Query: 239 MLSSDIPVESGRKTKSLPHTGKEKDDLTSELRELGWSDMDLRNEDGNKAKMSLEGELSSM 298
+ ES + K L GK DDL ++LRELGWSD +ED A +SLEGE SS+
Sbjct: 215 TQNKAATKESSKSQKPLRQGGKGNDDLAADLRELGWSD----DEDKKPATISLEGEFSSL 270
Query: 299 LGEIFAKTGEEKGSRIDKTQVVAMKKKALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
L EI +K IDK+QV+A+K+KAL
Sbjct: 271 LREIPRSANPQKTGGIDKSQVIALKRKALTLKREGKLAEAKDELKKAKILERELEEQELL 330
Query: 359 XXXXXXXXXXXXXIRGMDDD-DKDFSNLHDQEHGFDFDHLVGTSDDL--HGNFEVTEKDM 415
I MDDD + D ++ H FD +LVG DD+ HG ++VT++DM
Sbjct: 331 GGADGSDDELSALINSMDDDKEDDLLAQYEGSHDFDISNLVGNLDDIGVHGEYDVTDEDM 390
Query: 416 MDPELAGALEALGWTEP----ENSSSKSQTFDKEALLNEIKSLKREALNQKRAGHTEEAM 471
DP +A AL++LGW+E EN S+ +++ L EI++LKREALN KRAG+ EAM
Sbjct: 391 EDPAIAAALKSLGWSEDPGHHENVHSRPSPKNRDESLAEIQTLKREALNLKRAGNVVEAM 450
Query: 472 AFLKKAKLLERDLNSFGSEDNTGNGSDSIQLDERXXXXXXXXXSTVAPKSRLMIQRELLS 531
A LKKAKLLE++L + + T + + + ER P+SRL IQ+ELL+
Sbjct: 451 ATLKKAKLLEKELEAADTSSETVDTTRA----ERDTSLKP------PPRSRLAIQKELLA 500
Query: 532 LKKKALTLRREGKINEAEEEMRKGAALECQLMEMDKASNGKASSMNTADNVLHSAHKHAD 591
+KKKALTLRREGK NEAEEE++KGA L+ QL E+D +S A+ T + K D
Sbjct: 501 VKKKALTLRREGKFNEAEEELKKGAVLQNQLDELDNSSKLAATGKATRE-------KGND 553
Query: 592 SNRNPPLEEGNEDDVTDNDLSDPRYLSLLRDLGWNDDNDELSNSPSKP-LKKDDTHPVQI 650
L++ E DV D +L+DP YLS+L+ LGWND++ N+P+ P +K D +
Sbjct: 554 LPDISSLDDDGEVDVKDEELNDPNYLSMLKSLGWNDED----NNPAGPSSEKSDPLNSRP 609
Query: 651 SDSSLSKHSTSISVEAPRRSKAEIQRELLGLKRKAFTLRREGKAEDAEEVLKMTKVLEAK 710
++ ++ + + V PRR+KAEIQRELLGLKRKA TLRR+G ++AEEVL T++LEA+
Sbjct: 610 GKTAEAQGAYEVRVTKPRRTKAEIQRELLGLKRKALTLRRQGNVDEAEEVLNQTQILEAQ 669
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 148/326 (45%), Gaps = 85/326 (26%)
Query: 388 QEHGFDFDHLVGTSDDLHGNFEVTEKDMMDPELAGALEALGWTEPENSSSKSQTFDKEAL 447
+E G D + DD G +V ++++ DP L++LGW + +N+ +
Sbjct: 548 REKGNDLPDISSLDDD--GEVDVKDEELNDPNYLSMLKSLGWNDEDNNPAGPS------- 598
Query: 448 LNEIKSLKREALNQKRAGHTEEAMAFLKKAKLLERDLNSFGSEDNTGNGSDSIQLDERXX 507
S K + LN R G T EA G+ +++
Sbjct: 599 -----SEKSDPLNS-RPGKTAEAQ------------------------GAYEVRV----- 623
Query: 508 XXXXXXXSTVAPKSRLMIQRELLSLKKKALTLRREGKINEAEEEMRKGAALECQLMEMDK 567
T +++ IQRELL LK+KALTLRR+G ++EAEE + + LE Q+ME+D
Sbjct: 624 --------TKPRRTKAEIQRELLGLKRKALTLRRQGNVDEAEEVLNQTQILEAQIMEIDS 675
Query: 568 ASNGKASSMNTADNVLHSAHKHADSNRNPPLEEGNEDDVTDNDLSDPRYLSLLRDLGWND 627
N A S S DS N G +D VT+ND+ DP LS L++LGW D
Sbjct: 676 GKNLYADSDQPKK---RSNDLATDSRLN-----GGDDSVTENDMKDPALLSTLKNLGWED 727
Query: 628 DNDELSNSPSKPLKKDDTHPVQISDSSLSKHSTSISVEAPR---RSKAEIQRELLGLKRK 684
+ +P K++ + S+ PR +SK +IQRELL LKRK
Sbjct: 728 E---------EPKKEEASF-------------GSVQSSGPRIAAKSKGQIQRELLDLKRK 765
Query: 685 AFTLRREGKAEDAEEVLKMTKVLEAK 710
A +R+GK DA+E+ VLEA+
Sbjct: 766 ALAFKRQGKTGDADELYSKASVLEAQ 791
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 128/290 (44%), Gaps = 61/290 (21%)
Query: 435 SSSKSQTFDKEALLNEIKSLKREALNQKRAGHTEEAMAFLKKAKLLERDLNSFGSEDNTG 494
S+S T + L EI + K++AL KR G+ EA L++AKLLER L +
Sbjct: 922 SASIQNTSPQNTLKQEILAHKKKALALKREGNISEAKKALQEAKLLERRLQEGENPSPEK 981
Query: 495 NGSDSI--QLDERXXXXXXXXXSTVAPKS-----RLMIQRELLSLKKKALTLRREGKINE 547
G D + ++ S+ APK+ R +Q+E LS K++A+ LRREGK+ E
Sbjct: 982 LGRDDMVSTTEDPPAREKENSPSSSAPKAMSGRDRFKLQQESLSHKRQAMKLRREGKMQE 1041
Query: 548 AEEEMRKGAALECQLMEMDKASNGKASSMNTADNVLHSAHKHADSNRNPPLEEGNEDDVT 607
AE E LE QL + + S++ P+ DDV
Sbjct: 1042 AEAEFEIAKTLEAQL-------------------------EDSTSSKPEPV-----DDVA 1071
Query: 608 DNDLSDPRYLSLLRDLGWNDDNDELSNSPSKPLKKDDT-------HPVQISDSSLSKHST 660
D DP+ LS L+ +G D N P P+ K DT +PV+ S+ + +
Sbjct: 1072 VEDFLDPQLLSALKAIGL----DNPVNPP--PVSKTDTTQAAAKPNPVKESNRNTNNQER 1125
Query: 661 SISVEAPRRSKAEIQRELLGLKRKAFTLRREGKAEDAEEVLKMTKVLEAK 710
S + R KAE K KA T +R GK +A + L+ K+ E K
Sbjct: 1126 S---QLEERIKAE--------KVKAVTFKRAGKQAEALDALRRAKLYEKK 1164
>AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:6971554-6974578 FORWARD LENGTH=601
Length = 601
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 16 NNWVVD--ASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQRMYLRGQGDSP-VRICDP 72
++WV D S C C + F R+HHCR CG +FC+ CT R+ L + ++P VR+CD
Sbjct: 450 DHWVPDEAVSKCTSCGSDFGAFIRRHHCRNCGDVFCDKCTQGRIALTAEDNAPQVRVCDR 509
Query: 73 CKKLEEAARFEMRQGRRAGRGGSLKS 98
C + E ++ GR SL+S
Sbjct: 510 C--MAEVSQRLSNAKETTGRNVSLQS 533
>AT3G14270.1 | Symbols: FAB1B | phosphatidylinositol-4-phosphate
5-kinase family protein | chr3:4754624-4761185 FORWARD
LENGTH=1791
Length = 1791
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 18 WVVDASN--CQGCCAQFTFINRKHHCRRCGGLFCNSCTHQRM-YLRGQGDSP------VR 68
W+ D S C C QFT INR+HHCR CG +FC CT + + +P +R
Sbjct: 36 WMPDQSCRVCYECDCQFTLINRRHHCRHCGRVFCGKCTANSIPFAPSDLRTPREDWERIR 95
Query: 69 ICDPC 73
+C+ C
Sbjct: 96 VCNYC 100
>AT3G43230.1 | Symbols: | RING/FYVE/PHD-type zinc finger family
protein | chr3:15207776-15209599 FORWARD LENGTH=485
Length = 485
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 18 WVVD--ASNCQGCCAQFTFIN-RKHHCRRCGGLFCNSCTHQRMYL--RGQGDSPVRICDP 72
W+ D AS C C FT I +HHCR CGG+FC +C+ R + R + +P R+CD
Sbjct: 172 WLPDSLASTCMQCSTPFTAITCGRHHCRFCGGIFCRNCSKGRCLMPSRFRERNPQRVCDS 231
Query: 73 C 73
C
Sbjct: 232 C 232
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 20 VDASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQR---MYLRGQGDSPVRICDPCK-K 75
D++ C GC F ++ + H+C CG +FCNSCT ++ + + + P R+CD C K
Sbjct: 640 TDSTKCSGCRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIK 699
Query: 76 LE 77
LE
Sbjct: 700 LE 701
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 20 VDASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQ---RMYLRGQGDSPVRICDPC-KK 75
+D S C GC F+F ++H+C CG +FC+SCT + + + + P R+CD C K
Sbjct: 657 MDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNK 716
Query: 76 LEEAARFEMRQGRRAGRGGSLK--SAPRDEDE 105
L++ + R GS+ S P D+D+
Sbjct: 717 LKKTMETDPSSHSSLSRRGSINQGSDPIDKDD 748
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 20 VDASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQ---RMYLRGQGDSPVRICDPC-KK 75
+D S C GC F F ++H+C CG +FC+SC+++ + + + P R+CD C K
Sbjct: 661 MDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNK 720
Query: 76 LEEA 79
L++A
Sbjct: 721 LKKA 724
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 20 VDASNCQGCCAQFTFINRKHHCRRCGGLFCNSCTHQ---RMYLRGQGDSPVRICDPC-KK 75
+D S C GC F F ++H+C CG +FC+SC+++ + + + P R+CD C K
Sbjct: 695 MDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNK 754
Query: 76 LEEA 79
L++A
Sbjct: 755 LKKA 758