Miyakogusa Predicted Gene

Lj4g3v0412640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0412640.2 Non Chatacterized Hit- tr|I1KQU4|I1KQU4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3186
PE=,85.59,0,FAD/NAD(P)-binding domain,NULL; SE,Squalene epoxidase;
SQUALENE MONOOXYGENASE,NULL; no description,N,CUFF.48671.2
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreduc...   296   6e-81
AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 | chr4:177440...   283   6e-77
AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 | chr2:972394...   275   1e-74
AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase ...   187   3e-48
AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidoredu...   186   8e-48
AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 | chr5:818...   180   6e-46
AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 | chr5:81...   167   4e-42

>AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding
           oxidoreductase family protein | chr1:21714094-21717246
           REVERSE LENGTH=531
          Length = 531

 Score =  296 bits (758), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 144/202 (71%), Positives = 173/202 (85%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
           M  YLKTVVA Q+P E++ SFIAA+DKGN+++MP+R MPASP+PTPGALL+GDAFNMRHP
Sbjct: 295 MKNYLKTVVAPQMPHEVYDSFIAAVDKGNIKSMPNRSMPASPYPTPGALLMGDAFNMRHP 354

Query: 61  LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
           LTGGGMTVALADIVVLRNLLRPL DL + +++CKYLESFYTLRKP+A+TINTLA AL +V
Sbjct: 355 LTGGGMTVALADIVVLRNLLRPLRDLSDGASLCKYLESFYTLRKPVAATINTLANALYQV 414

Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
           F  S + A  E+++A  DYL LG + + G  SLLSGLNPRPL++V HFFAVA+YGV RLL
Sbjct: 415 FCSSENEARNEMREACFDYLGLGGMCTSGPVSLLSGLNPRPLTLVCHFFAVAVYGVIRLL 474

Query: 181 KPFPSPKRIWIGARLISGAACI 202
            PFPSPKRIW+GA+LISGA+ I
Sbjct: 475 IPFPSPKRIWLGAKLISGASGI 496


>AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 |
           chr4:17744085-17746426 FORWARD LENGTH=525
          Length = 525

 Score =  283 bits (724), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 141/202 (69%), Positives = 169/202 (83%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
           MA +LKT+VA QVPP++  +FI+A++KGN+RTMP+R MPA P  TPGALL+GDAFNMRHP
Sbjct: 289 MAHHLKTMVAPQVPPQIRDAFISAVEKGNIRTMPNRSMPADPIHTPGALLLGDAFNMRHP 348

Query: 61  LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
           LTGGGMTVAL+DIV+LR+LL PL DL N  ++ KY+ESFYTLRKP+ASTINTLA AL KV
Sbjct: 349 LTGGGMTVALSDIVILRDLLNPLVDLTNKESLSKYIESFYTLRKPVASTINTLAGALYKV 408

Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
           F  SPD A  E+++A  DYLSLG V S G  +LLSGLNPRP+S+VLHFFAVAI+GVGRLL
Sbjct: 409 FLASPDDARSEMRRACFDYLSLGGVCSSGPVALLSGLNPRPMSLVLHFFAVAIFGVGRLL 468

Query: 181 KPFPSPKRIWIGARLISGAACI 202
            P PS KR+W+GARLIS A+ I
Sbjct: 469 VPLPSVKRLWLGARLISSASGI 490


>AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 |
           chr2:9723947-9726270 REVERSE LENGTH=585
          Length = 585

 Score =  275 bits (703), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/194 (70%), Positives = 160/194 (82%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
           MA YLKT VA QVP ++  +FI A++KGN+RTMP+R MPA P PTPGALL+GDAFNMRHP
Sbjct: 357 MAKYLKTRVAPQVPTKVREAFITAVEKGNIRTMPNRSMPADPIPTPGALLLGDAFNMRHP 416

Query: 61  LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
           LTGGGMTVALADIVVLR+LLRP+ +L++  A+ KY+ESFYTLRKP+ASTINTLA AL KV
Sbjct: 417 LTGGGMTVALADIVVLRDLLRPIRNLNDKEALSKYIESFYTLRKPVASTINTLADALYKV 476

Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
           F  S D A  E+++A  DYLSLG VFS G  +LLSGLNPRPLS+VLHFFAVAIY V RL+
Sbjct: 477 FLASSDEARTEMREACFDYLSLGGVFSSGPVALLSGLNPRPLSLVLHFFAVAIYAVCRLM 536

Query: 181 KPFPSPKRIWIGAR 194
            PFPS +  W+GAR
Sbjct: 537 LPFPSIESFWLGAR 550


>AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase
           family protein | chr5:8172670-8175395 REVERSE LENGTH=490
          Length = 490

 Score =  187 bits (476), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 1/199 (0%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKGN-MRTMPSRFMPASPHPTPGALLIGDAFNMRH 59
           MA ++K  +A QVP +L   F+  ID+G  ++ MP++ M A+     G +L+GDAFNMRH
Sbjct: 282 MATFVKNTIAPQVPLKLRKIFLKGIDEGEHIKAMPTKKMTATLSEKKGVILLGDAFNMRH 341

Query: 60  PLTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPK 119
           P    GM V L+DI++LR LL+PL +L NA  I + ++SFY +RKPM++T+NTL  A  +
Sbjct: 342 PAIASGMMVLLSDILILRRLLQPLSNLGNAQKISQVIKSFYDIRKPMSATVNTLGNAFSQ 401

Query: 120 VFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRL 179
           V   S D A + ++Q   DYLS G   + G+ +LL G+NPRP+S++ H  A+ +  +G L
Sbjct: 402 VLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHL 461

Query: 180 LKPFPSPKRIWIGARLISG 198
           L PFPSP RIW   RL  G
Sbjct: 462 LSPFPSPLRIWHSLRLFVG 480


>AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding
           oxidoreductase family protein | chr5:8172594-8175395
           REVERSE LENGTH=516
          Length = 516

 Score =  186 bits (473), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 89/196 (45%), Positives = 129/196 (65%), Gaps = 1/196 (0%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKG-NMRTMPSRFMPASPHPTPGALLIGDAFNMRH 59
           MA ++K  +A QVP +L   F+  ID+G +++ MP++ M A+     G +L+GDAFNMRH
Sbjct: 282 MATFVKNTIAPQVPLKLRKIFLKGIDEGEHIKAMPTKKMTATLSEKKGVILLGDAFNMRH 341

Query: 60  PLTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPK 119
           P    GM V L+DI++LR LL+PL +L NA  I + ++SFY +RKPM++T+NTL  A  +
Sbjct: 342 PAIASGMMVLLSDILILRRLLQPLSNLGNAQKISQVIKSFYDIRKPMSATVNTLGNAFSQ 401

Query: 120 VFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRL 179
           V   S D A + ++Q   DYLS G   + G+ +LL G+NPRP+S++ H  A+ +  +G L
Sbjct: 402 VLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHL 461

Query: 180 LKPFPSPKRIWIGARL 195
           L PFPSP RIW   RL
Sbjct: 462 LSPFPSPLRIWHSLRL 477


>AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 |
           chr5:8183291-8186601 REVERSE LENGTH=517
          Length = 517

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 130/196 (66%), Gaps = 1/196 (0%)

Query: 1   MALYLKTVVASQVPPELHTSFIAAIDKG-NMRTMPSRFMPASPHPTPGALLIGDAFNMRH 59
           M+ ++K  +  QVPP+L   F+  ID+G +++ +P++ M ++     G +++GDAFNMRH
Sbjct: 283 MSTFMKNTIVPQVPPKLRKIFLKGIDEGAHIKVVPAKRMTSTLSKKKGVIVLGDAFNMRH 342

Query: 60  PLTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPK 119
           P+   GM V L+DI++LR LL+PL +L +A+ + + + SFY +RKPM++T+NTL  A  +
Sbjct: 343 PVVASGMMVLLSDILILRRLLQPLSNLGDANKVSEVINSFYDIRKPMSATVNTLGNAFSQ 402

Query: 120 VFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRL 179
           V   S D A + ++Q   DYL  G   + G+ +LL G+NPRPLS+V H  A+ +  +G+L
Sbjct: 403 VLIGSTDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQL 462

Query: 180 LKPFPSPKRIWIGARL 195
           L PFPSP RIW   +L
Sbjct: 463 LSPFPSPLRIWHSLKL 478


>AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 |
           chr5:8164547-8167669 REVERSE LENGTH=516
          Length = 516

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 129/203 (63%), Gaps = 4/203 (1%)

Query: 1   MALYLKTVVASQVPP--ELHTSFIAAIDKG--NMRTMPSRFMPASPHPTPGALLIGDAFN 56
           M+ +LK  +A Q+P    L   F+  I++G   +++  ++ M +      G +++GDAFN
Sbjct: 279 MSTFLKKSMAPQIPETGNLREIFLKGIEEGLPEIKSTATKSMSSRLCDKRGVIVLGDAFN 338

Query: 57  MRHPLTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATA 116
           MRHP+   GM VAL+DI +LRNLL+PL +L N   +   ++SFY +RKPM++T+NTLA+ 
Sbjct: 339 MRHPIIASGMMVALSDICILRNLLKPLPNLSNTKKVSDLVKSFYIIRKPMSATVNTLASI 398

Query: 117 LPKVFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGV 176
             +V   + D A + ++Q   +YL+ G   + GL ++L G+NP PL++VLH  A+ +  +
Sbjct: 399 FSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSM 458

Query: 177 GRLLKPFPSPKRIWIGARLISGA 199
           G LL PFPSP+R W   R+++ A
Sbjct: 459 GHLLSPFPSPRRFWHSLRILAWA 481