Miyakogusa Predicted Gene

Lj4g3v0412640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0412640.1 Non Chatacterized Hit- tr|I1KL88|I1KL88_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56390
PE,74.19,0,seg,NULL; DAO,FAD dependent oxidoreductase; no
description,NULL; SQUALENE MONOOXYGENASE,NULL; FAD/NA,CUFF.48671.1
         (319 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreduc...   389   e-108
AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 | chr4:177440...   387   e-108
AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 | chr2:972394...   382   e-106
AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidoredu...   278   3e-75
AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase ...   278   4e-75
AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 | chr5:818...   271   3e-73
AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 | chr5:81...   253   1e-67
AT5G24155.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...    62   7e-10

>AT1G58440.1 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding
           oxidoreductase family protein | chr1:21714094-21717246
           REVERSE LENGTH=531
          Length = 531

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/275 (68%), Positives = 220/275 (80%)

Query: 45  AKTTSENGICPQNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEV 104
           +  TS+ G     G+   D            LAYTLG+D RRVHVIERDL+EPDRIVGE+
Sbjct: 44  STVTSDVGSVNITGDTVADVIVVGAGVAGSALAYTLGKDKRRVHVIERDLSEPDRIVGEL 103

Query: 105 LIPGGYLKLIELGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGR 164
           L PGGYLKL+ELG+EDC++EIDAQ+++GYA +K+GK  +L+YPLEKF   VSG+SFHNGR
Sbjct: 104 LQPGGYLKLLELGIEDCVEEIDAQRVYGYALFKNGKRIRLAYPLEKFHEDVSGRSFHNGR 163

Query: 165 FIQRMRKKALSLPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFS 224
           FIQRMR+KA SLPNV+LEQGTV SL+EE GTIKGV YK K+G+E  A A LTIVCDGCFS
Sbjct: 164 FIQRMREKAASLPNVQLEQGTVLSLLEENGTIKGVRYKNKAGEEQTAFAALTIVCDGCFS 223

Query: 225 NLRRSLCTPKVEVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELH 284
           NLRRSLC P+VEVPS FV LVLENCNLPYANHGH++  DPS IL YPISSTEVRC V++ 
Sbjct: 224 NLRRSLCNPQVEVPSCFVGLVLENCNLPYANHGHVVLADPSPILMYPISSTEVRCLVDVP 283

Query: 285 GQKLPSIGNGEMALYLKTVVASQVPPELHTSFIAA 319
           GQK+PSI NGEM  YLKTVVA Q+P E++ SFIAA
Sbjct: 284 GQKVPSIANGEMKNYLKTVVAPQMPHEVYDSFIAA 318


>AT4G37760.1 | Symbols: SQE3 | squalene epoxidase 3 |
           chr4:17744085-17746426 FORWARD LENGTH=525
          Length = 525

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/244 (73%), Positives = 213/244 (87%)

Query: 76  LAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLEDCLDEIDAQQIFGYAF 135
           LA+TLG++GRRVHVIERDL EPDRIVGE+L PGGYLKLIELGLEDC+ +IDAQ++ GYA 
Sbjct: 69  LAHTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVKDIDAQRVLGYAL 128

Query: 136 YKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALSLPNVKLEQGTVTSLVEEKGT 195
           +KDGK  KLSYPL++FDS V+G+SFHNGRF+QRMR+KA  LPNV++EQGTVTSLVEE G 
Sbjct: 129 FKDGKHTKLSYPLDQFDSDVAGRSFHNGRFVQRMREKASLLPNVRMEQGTVTSLVEENGI 188

Query: 196 IKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEVPSHFVALVLENCNLPYAN 255
           IKGV YKTK GQEL + APLTIVCDGCFSNLRRSLC PKVEVPS+FV LVLENC LP+ N
Sbjct: 189 IKGVQYKTKDGQELKSFAPLTIVCDGCFSNLRRSLCKPKVEVPSNFVGLVLENCELPFPN 248

Query: 256 HGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMALYLKTVVASQVPPELHTS 315
           HGH++ GDPS IL YPISS+EVRC V++ G KLPS+ +GEMA +LKT+VA QVPP++  +
Sbjct: 249 HGHVVLGDPSPILFYPISSSEVRCLVDVPGSKLPSVASGEMAHHLKTMVAPQVPPQIRDA 308

Query: 316 FIAA 319
           FI+A
Sbjct: 309 FISA 312


>AT2G22830.1 | Symbols: SQE2 | squalene epoxidase 2 |
           chr2:9723947-9726270 REVERSE LENGTH=585
          Length = 585

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/289 (64%), Positives = 220/289 (76%), Gaps = 8/289 (2%)

Query: 39  KSSNGCAK----TTSENGICPQNGE----GSTDXXXXXXXXXXXXLAYTLGEDGRRVHVI 90
           +SSN   K      S+N    +N E      TD            LA+TLG++GRRVHVI
Sbjct: 92  RSSNKNKKNRGLVVSQNDTVSKNLETEVDSGTDVIIVGAGVAGSALAHTLGKEGRRVHVI 151

Query: 91  ERDLNEPDRIVGEVLIPGGYLKLIELGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEK 150
           ERD +E DRIVGE+L PGGYLKLIELGLEDC+ +IDAQ++ GY  +KDGK  KL+YPLE 
Sbjct: 152 ERDFSEQDRIVGELLQPGGYLKLIELGLEDCVKKIDAQRVLGYVLFKDGKHTKLAYPLET 211

Query: 151 FDSHVSGKSFHNGRFIQRMRKKALSLPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELI 210
           FDS V+G+SFHNGRF+QRMR+KAL+L NV+LEQGTVTSL+EE GTIKGV Y+TK G E  
Sbjct: 212 FDSDVAGRSFHNGRFVQRMREKALTLSNVRLEQGTVTSLLEEHGTIKGVRYRTKEGNEFR 271

Query: 211 AKAPLTIVCDGCFSNLRRSLCTPKVEVPSHFVALVLENCNLPYANHGHIIFGDPSTILSY 270
           + APLTIVCDGCFSNLRRSLC PKV+VPS FV LVLENC LP+ANHGH++ GDPS IL Y
Sbjct: 272 SFAPLTIVCDGCFSNLRRSLCKPKVDVPSTFVGLVLENCELPFANHGHVVLGDPSPILMY 331

Query: 271 PISSTEVRCFVELHGQKLPSIGNGEMALYLKTVVASQVPPELHTSFIAA 319
           PISS+EVRC V++ GQKLP I NGEMA YLKT VA QVP ++  +FI A
Sbjct: 332 PISSSEVRCLVDVPGQKLPPIANGEMAKYLKTRVAPQVPTKVREAFITA 380


>AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding
           oxidoreductase family protein | chr5:8172594-8175395
           REVERSE LENGTH=516
          Length = 516

 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 141/280 (50%), Positives = 182/280 (65%), Gaps = 2/280 (0%)

Query: 40  SSNGCAKTTSENGICPQNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDR 99
           ++ G   T   + +  +  +G+TD            LAY L +DGRRVHVIERDL EP+R
Sbjct: 24  TNRGKKATQLADAVVEEREDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPER 83

Query: 100 IVGEVLIPGGYLKLIELGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEK--FDSHVSG 157
           I+GE + PGG L L +LGLEDCL+ IDAQ+  G   YKDGK A  S+P++   F    S 
Sbjct: 84  IMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSA 143

Query: 158 KSFHNGRFIQRMRKKALSLPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTI 217
           +SFHNGRF+QR+R+KA SLPNV+LE+GTV SL+EEKG IKGV YK  +G+E  A APLT+
Sbjct: 144 RSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTV 203

Query: 218 VCDGCFSNLRRSLCTPKVEVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEV 277
           VCDGC+SNLRRSL     EV S+ V  + +NC L       +I   PS  + Y ISST+V
Sbjct: 204 VCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLYQISSTDV 263

Query: 278 RCFVELHGQKLPSIGNGEMALYLKTVVASQVPPELHTSFI 317
           RC  E+    +PSI NGEMA ++K  +A QVP +L   F+
Sbjct: 264 RCVFEVLPNNIPSISNGEMATFVKNTIAPQVPLKLRKIFL 303


>AT5G24150.2 | Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase
           family protein | chr5:8172670-8175395 REVERSE LENGTH=490
          Length = 490

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 141/280 (50%), Positives = 182/280 (65%), Gaps = 2/280 (0%)

Query: 40  SSNGCAKTTSENGICPQNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDR 99
           ++ G   T   + +  +  +G+TD            LAY L +DGRRVHVIERDL EP+R
Sbjct: 24  TNRGKKATQLADAVVEEREDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPER 83

Query: 100 IVGEVLIPGGYLKLIELGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEK--FDSHVSG 157
           I+GE + PGG L L +LGLEDCL+ IDAQ+  G   YKDGK A  S+P++   F    S 
Sbjct: 84  IMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSA 143

Query: 158 KSFHNGRFIQRMRKKALSLPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTI 217
           +SFHNGRF+QR+R+KA SLPNV+LE+GTV SL+EEKG IKGV YK  +G+E  A APLT+
Sbjct: 144 RSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTV 203

Query: 218 VCDGCFSNLRRSLCTPKVEVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEV 277
           VCDGC+SNLRRSL     EV S+ V  + +NC L       +I   PS  + Y ISST+V
Sbjct: 204 VCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLYQISSTDV 263

Query: 278 RCFVELHGQKLPSIGNGEMALYLKTVVASQVPPELHTSFI 317
           RC  E+    +PSI NGEMA ++K  +A QVP +L   F+
Sbjct: 264 RCVFEVLPNNIPSISNGEMATFVKNTIAPQVPLKLRKIFL 303


>AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 |
           chr5:8183291-8186601 REVERSE LENGTH=517
          Length = 517

 Score =  271 bits (694), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 136/282 (48%), Positives = 182/282 (64%), Gaps = 8/282 (2%)

Query: 39  KSSNGCAKTTSENGICPQNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPD 98
           K +   A T +E+       +G+ D            LAY L +DGRRVHVIERD+ EP+
Sbjct: 28  KKATDLADTVAED-----QKDGAADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPE 82

Query: 99  RIVGEVLIPGGYLKLIELGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEK--FDSHVS 156
           R++GE + PGG L L +LGL+DCL++IDAQ+  G A YKDGK A   +P++   F    S
Sbjct: 83  RMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPS 142

Query: 157 GKSFHNGRFIQRMRKKALSLPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLT 216
            +SFHNGRF+Q++R+KA SL NV+LE+GTV SL+EEKG +KGV YK K G+E  A APLT
Sbjct: 143 ARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETTALAPLT 202

Query: 217 IVCDGCFSNLRRSLCTP-KVEVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISST 275
           +VCDGC+SNLRRSL      E+ S+ V  + +NC L      H+I   PS  + Y ISST
Sbjct: 203 VVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPSFTMVYQISST 262

Query: 276 EVRCFVELHGQKLPSIGNGEMALYLKTVVASQVPPELHTSFI 317
           +VRC  E+  +  PSI NGEM+ ++K  +  QVPP+L   F+
Sbjct: 263 DVRCGFEVLPENFPSIANGEMSTFMKNTIVPQVPPKLRKIFL 304


>AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 |
           chr5:8164547-8167669 REVERSE LENGTH=516
          Length = 516

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 127/252 (50%), Positives = 165/252 (65%), Gaps = 1/252 (0%)

Query: 59  EGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGL 118
           +G+TD            LAY L +DGRRVHVIERDL EP R +GE++  GG   L +LGL
Sbjct: 41  DGATDVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGL 100

Query: 119 EDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEK-FDSHVSGKSFHNGRFIQRMRKKALSLP 177
           EDCL++IDAQ+    A YKDGK A L +P +K F     G+   NGR +QR+R+KA SL 
Sbjct: 101 EDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLS 160

Query: 178 NVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEV 237
           NV+LE+GTV SL+EE+G +KGV YK  +G+E+ A APLT+VCDGC+SNLRRSL     EV
Sbjct: 161 NVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEV 220

Query: 238 PSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMA 297
            S+ V  V +N  L   +  H+IF  P   + Y I+S EVRC  E+    +PSI NGEM+
Sbjct: 221 LSYMVGYVTKNSRLEDPHSLHLIFSKPLVCVIYQITSDEVRCVAEVPADSIPSISNGEMS 280

Query: 298 LYLKTVVASQVP 309
            +LK  +A Q+P
Sbjct: 281 TFLKKSMAPQIP 292


>AT5G24155.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr5:8180118-8181016 REVERSE LENGTH=121
          Length = 121

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 76  LAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLE 119
           LAY+L +DGRRV  IERD+ EP+R++GE + PGG L L +LGLE
Sbjct: 62  LAYSLAKDGRRVLAIERDMREPERMMGEFMQPGGRLMLSKLGLE 105