Miyakogusa Predicted Gene

Lj4g3v0409520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0409520.1 Non Chatacterized Hit- tr|I3T0F9|I3T0F9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,SelR,Peptide methionine sulphoxide reductase MrsB; no
description,Peptide methionine sulphoxide redu,CUFF.47067.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21860.3 | Symbols: MSRB2 | methionine sulfoxide reductase B ...   248   1e-66
AT4G21860.1 | Symbols: MSRB2 | methionine sulfoxide reductase B ...   248   1e-66
AT4G04800.1 | Symbols: ATMSRB3, MSRB3 | methionine sulfoxide red...   233   6e-62
AT4G04830.1 | Symbols: ATMSRB5, MSRB5 | methionine sulfoxide red...   228   3e-60
AT4G04810.1 | Symbols: ATMSRB4, MSRB4 | methionine sulfoxide red...   216   1e-56
AT4G21850.1 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide red...   202   1e-52
AT4G04830.2 | Symbols: MSRB5 | methionine sulfoxide reductase B5...   199   7e-52
AT4G21840.1 | Symbols: ATMSRB8, MSRB8 | methionine sulfoxide red...   198   2e-51
AT4G21830.2 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide red...   197   3e-51
AT4G21830.1 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide red...   196   1e-50
AT4G04840.1 | Symbols: ATMSRB6, MSRB6 | methionine sulfoxide red...   186   1e-47
AT4G21860.2 | Symbols: MSRB2 | methionine sulfoxide reductase B ...   150   5e-37
AT4G21850.2 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide red...   122   1e-28
AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide red...   117   7e-27
AT1G53670.2 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide red...   100   5e-22

>AT4G21860.3 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600238-11601507 REVERSE LENGTH=202
          Length = 202

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 117/146 (80%), Positives = 130/146 (89%), Gaps = 5/146 (3%)

Query: 65  KRGFRGGVVVAM--AAPQ---KSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGV 119
           +RGF GG +VAM  +AP+   K E+EWRA+LSPEQFRILRQKGTEYPGTGEY+K F +G+
Sbjct: 54  RRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGI 113

Query: 120 YRCAGCETPLYRSTTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVF 179
           Y CAGC TPLY+STTKF+SGCGWPAF++GLPGAI R PDPDGRRIEITCAACGGHLGHVF
Sbjct: 114 YCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDGRRIEITCAACGGHLGHVF 173

Query: 180 KGEGFPTPTDERHCVNSISLKFVPAN 205
           KGEGFPTPTDERHCVNSISLKF P N
Sbjct: 174 KGEGFPTPTDERHCVNSISLKFTPEN 199


>AT4G21860.1 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600238-11601507 REVERSE LENGTH=202
          Length = 202

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 117/146 (80%), Positives = 130/146 (89%), Gaps = 5/146 (3%)

Query: 65  KRGFRGGVVVAM--AAPQ---KSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGV 119
           +RGF GG +VAM  +AP+   K E+EWRA+LSPEQFRILRQKGTEYPGTGEY+K F +G+
Sbjct: 54  RRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGI 113

Query: 120 YRCAGCETPLYRSTTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVF 179
           Y CAGC TPLY+STTKF+SGCGWPAF++GLPGAI R PDPDGRRIEITCAACGGHLGHVF
Sbjct: 114 YCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDGRRIEITCAACGGHLGHVF 173

Query: 180 KGEGFPTPTDERHCVNSISLKFVPAN 205
           KGEGFPTPTDERHCVNSISLKF P N
Sbjct: 174 KGEGFPTPTDERHCVNSISLKFTPEN 199


>AT4G04800.1 | Symbols: ATMSRB3, MSRB3 | methionine sulfoxide
           reductase B3 | chr4:2439574-2440937 FORWARD LENGTH=176
          Length = 176

 Score =  233 bits (594), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 107/134 (79%), Positives = 115/134 (85%), Gaps = 3/134 (2%)

Query: 74  VAMAAP---QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLY 130
           VAMAAP   QK ++EWRA+LSPEQFRILRQKGTEYPGTGEY  F  EGVY C GC  PLY
Sbjct: 39  VAMAAPGSVQKGDEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLY 98

Query: 131 RSTTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDE 190
           +STTKFN+GCGWPAF+EG+PGAI R  DPDGRRIEI CA CGGHLGHVFKGEGF TPTDE
Sbjct: 99  KSTTKFNAGCGWPAFFEGIPGAITRTTDPDGRRIEINCATCGGHLGHVFKGEGFATPTDE 158

Query: 191 RHCVNSISLKFVPA 204
           RHCVNS+SLKF PA
Sbjct: 159 RHCVNSVSLKFTPA 172


>AT4G04830.1 | Symbols: ATMSRB5, MSRB5 | methionine sulfoxide
           reductase B5 | chr4:2445902-2446872 FORWARD LENGTH=139
          Length = 139

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 102/127 (80%), Positives = 114/127 (89%)

Query: 80  QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSG 139
           QK+E+EWRAVLSPEQFRILRQKGTE PGTGEYDKFF EG++ C GC+TPLY+STTKF+SG
Sbjct: 9   QKTEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSG 68

Query: 140 CGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 199
           CGWPAF+EGLPGAI R PDPDGRR EITCAAC GHLGHVFKGEG+  PTDERHCVNS+S+
Sbjct: 69  CGWPAFFEGLPGAINRTPDPDGRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVSI 128

Query: 200 KFVPANT 206
            F PA +
Sbjct: 129 SFNPAKS 135


>AT4G04810.1 | Symbols: ATMSRB4, MSRB4 | methionine sulfoxide
           reductase B4 | chr4:2441412-2442567 FORWARD LENGTH=139
          Length = 139

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 110/126 (87%)

Query: 80  QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSG 139
           +K+E+EWRAVLSPEQFRILRQKGTE PGT EYDKFF EG++ C GC+TPLY+STTKF++G
Sbjct: 9   KKTEEEWRAVLSPEQFRILRQKGTETPGTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDAG 68

Query: 140 CGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 199
           CGWPAF+EGLPGAI R PDPDGRR EITCA C GHLGHV KGEG+ TPTDER CVNS+S+
Sbjct: 69  CGWPAFFEGLPGAINRAPDPDGRRTEITCAVCDGHLGHVHKGEGYSTPTDERLCVNSVSI 128

Query: 200 KFVPAN 205
            F PA 
Sbjct: 129 NFNPAK 134


>AT4G21850.1 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide
           reductase B9 | chr4:11591378-11592138 REVERSE LENGTH=143
          Length = 143

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 107/130 (82%)

Query: 72  VVVAMAAPQKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYR 131
           V  +  + QK + +WRA+LSPEQFR+LR+KGTE  G GEY K F +G+Y CAGC TPLY+
Sbjct: 8   VAPSTGSVQKKDQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYK 67

Query: 132 STTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDER 191
           STTKF+SGCGWP+F++ +PGAI + P+  GRR+EITCAAC GHLGHV KGEGFPT TDER
Sbjct: 68  STTKFDSGCGWPSFFDAIPGAIKQTPEAGGRRMEITCAACDGHLGHVVKGEGFPTATDER 127

Query: 192 HCVNSISLKF 201
           HCVNS+SLKF
Sbjct: 128 HCVNSVSLKF 137


>AT4G04830.2 | Symbols: MSRB5 | methionine sulfoxide reductase B5 |
           chr4:2445902-2446872 FORWARD LENGTH=129
          Length = 129

 Score =  199 bits (507), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 92/127 (72%), Positives = 104/127 (81%), Gaps = 10/127 (7%)

Query: 80  QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSG 139
           QK+E+EWRAVLSPEQ           PGTGEYDKFF EG++ C GC+TPLY+STTKF+SG
Sbjct: 9   QKTEEEWRAVLSPEQ----------KPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSG 58

Query: 140 CGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 199
           CGWPAF+EGLPGAI R PDPDGRR EITCAAC GHLGHVFKGEG+  PTDERHCVNS+S+
Sbjct: 59  CGWPAFFEGLPGAINRTPDPDGRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVSI 118

Query: 200 KFVPANT 206
            F PA +
Sbjct: 119 SFNPAKS 125


>AT4G21840.1 | Symbols: ATMSRB8, MSRB8 | methionine sulfoxide
           reductase B8 | chr4:11587231-11588178 REVERSE LENGTH=143
          Length = 143

 Score =  198 bits (504), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 5/140 (3%)

Query: 72  VVVAMAAP-----QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCE 126
            + A A P     QK ++EWRAVLSPEQFR+LR KGT+  G GE+ K F EG Y CAGC 
Sbjct: 2   AMTAAAVPSSGSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCG 61

Query: 127 TPLYRSTTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPT 186
           T LY+STTKF+SGCGWPAF++ +PGAI + P+  GRR+EITCA C GHLGHVFKGEG+ T
Sbjct: 62  TALYKSTTKFDSGCGWPAFFDAIPGAIKQTPEAGGRRMEITCAVCDGHLGHVFKGEGYST 121

Query: 187 PTDERHCVNSISLKFVPANT 206
           PTD+RHCVNS+SLKF  A++
Sbjct: 122 PTDQRHCVNSVSLKFASADS 141


>AT4G21830.2 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide
           reductase B7 | chr4:11584565-11585247 REVERSE LENGTH=141
          Length = 141

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%)

Query: 72  VVVAMAAPQKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYR 131
            V A  + QK ++EWRAVLSPEQFR+LR KGT+  G GE+ K F EG Y CAGC T LY+
Sbjct: 5   AVPATGSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYK 64

Query: 132 STTKFNSGCGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDER 191
           STTKF+SGCGWPAF++ +PGAI + P+  GRR+EITCA C GHLGHVFKGEG+ TPTD+R
Sbjct: 65  STTKFDSGCGWPAFFDAIPGAIKQTPEAGGRRMEITCAVCDGHLGHVFKGEGYSTPTDQR 124

Query: 192 HCVNSISLKFVPANT 206
           HCVNS+SLKF  A +
Sbjct: 125 HCVNSVSLKFSSAGS 139


>AT4G21830.1 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide
           reductase B7 | chr4:11584565-11585256 REVERSE LENGTH=144
          Length = 144

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 104/127 (81%)

Query: 80  QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSG 139
           QK ++EWRAVLSPEQFR+LR KGT+  G GE+ K F EG Y CAGC T LY+STTKF+SG
Sbjct: 16  QKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSG 75

Query: 140 CGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 199
           CGWPAF++ +PGAI + P+  GRR+EITCA C GHLGHVFKGEG+ TPTD+RHCVNS+SL
Sbjct: 76  CGWPAFFDAIPGAIKQTPEAGGRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVNSVSL 135

Query: 200 KFVPANT 206
           KF  A +
Sbjct: 136 KFSSAGS 142


>AT4G04840.1 | Symbols: ATMSRB6, MSRB6 | methionine sulfoxide
           reductase B6 | chr4:2449659-2451302 FORWARD LENGTH=153
          Length = 153

 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 98/127 (77%)

Query: 80  QKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSG 139
           +KS +EWR VLSPEQF+ILR+K  E  G+GEY K F EG+Y C GC  P+Y+STTKF+SG
Sbjct: 25  KKSNEEWRTVLSPEQFKILREKSIEKRGSGEYVKLFEEGIYCCVGCGNPVYKSTTKFDSG 84

Query: 140 CGWPAFYEGLPGAIYRNPDPDGRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 199
           CGWPAF++ +PGAI R  +  G R EITC  C GHLGHV K EGFPTPTDERHCVNS++L
Sbjct: 85  CGWPAFFDAIPGAINRTEERAGLRYEITCTKCDGHLGHVLKNEGFPTPTDERHCVNSVAL 144

Query: 200 KFVPANT 206
           KF  A T
Sbjct: 145 KFSSAIT 151


>AT4G21860.2 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600282-11601507 REVERSE LENGTH=184
          Length = 184

 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 71/103 (68%), Positives = 85/103 (82%), Gaps = 5/103 (4%)

Query: 65  KRGFRGGVVVAM--AAPQ---KSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGV 119
           +RGF GG +VAM  +AP+   K E+EWRA+LSPEQFRILRQKGTEYPGTGEY+K F +G+
Sbjct: 54  RRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGI 113

Query: 120 YRCAGCETPLYRSTTKFNSGCGWPAFYEGLPGAIYRNPDPDGR 162
           Y CAGC TPLY+STTKF+SGCGWPAF++GLPGAI R    + R
Sbjct: 114 YCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTMGDESR 156


>AT4G21850.2 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide
           reductase B9 | chr4:11591548-11592138 REVERSE LENGTH=121
          Length = 121

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 66/83 (79%)

Query: 71  GVVVAMAAPQKSEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLY 130
            V  +  + QK + +WRA+LSPEQFR+LR+KGTE  G GEY K F +G+Y CAGC TPLY
Sbjct: 7   AVAPSTGSVQKKDQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLY 66

Query: 131 RSTTKFNSGCGWPAFYEGLPGAI 153
           +STTKF+SGCGWP+F++ +PGAI
Sbjct: 67  KSTTKFDSGCGWPSFFDAIPGAI 89


>AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide
           reductase B 1 | chr1:20036687-20038074 FORWARD
           LENGTH=202
          Length = 202

 Score =  117 bits (292), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 5/123 (4%)

Query: 82  SEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSGCG 141
           SE+EW+  L+PEQ+ I RQKGTE   TGEY      GVY C  C+TPL+ S+TKF+SG G
Sbjct: 74  SENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFDSSTKFDSGTG 133

Query: 142 WPAFYEGLPGAIYRNPDPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 198
           WP++Y+ +   +    D       R E+ CA C  HLGHVF  +  P PT +R+C+NS +
Sbjct: 134 WPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVF--DDGPRPTGKRYCLNSAA 191

Query: 199 LKF 201
           LK 
Sbjct: 192 LKL 194


>AT1G53670.2 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide
           reductase B 1 | chr1:20036687-20038074 FORWARD
           LENGTH=195
          Length = 195

 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 12/123 (9%)

Query: 82  SEDEWRAVLSPEQFRILRQKGTEYPGTGEYDKFFAEGVYRCAGCETPLYRSTTKFNSGCG 141
           SE+EW+  L+PEQ+ I RQKGTE   TGEY      GVY C  C+TPL+        G G
Sbjct: 74  SENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLF-------DGTG 126

Query: 142 WPAFYEGLPGAIYRNPDPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 198
           WP++Y+ +   +    D       R E+ CA C  HLGHVF  +  P PT +R+C+NS +
Sbjct: 127 WPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVF--DDGPRPTGKRYCLNSAA 184

Query: 199 LKF 201
           LK 
Sbjct: 185 LKL 187