Miyakogusa Predicted Gene

Lj4g3v0409480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0409480.1 tr|G7JU04|G7JU04_MEDTR Glutamyl-tRNA reductase
OS=Medicago truncatula GN=MTR_4g092820 PE=3 SV=1,75.43,0,Glutamyl
tRNA-reductase catalytic, N-terminal domain,Tetrapyrrole biosynthesis,
glutamyl-tRNA reduct,CUFF.47062.1
         (535 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family pr...   621   e-178
AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family pr...   605   e-173
AT2G31250.1 | Symbols: HEMA3 | Glutamyl-tRNA reductase family pr...   500   e-141

>AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family
           protein | chr1:21624028-21626051 REVERSE LENGTH=543
          Length = 543

 Score =  621 bits (1602), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/460 (65%), Positives = 370/460 (80%), Gaps = 3/460 (0%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           AADRYTKE+SSI+ IGL++HTAPVE+REKLAI E +WP+ I ELCGLNHIEEAAVLSTCN
Sbjct: 86  AADRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCN 145

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           R+EIYV+ALSQ+RGV+EVT+WMSK SG+P+ E+ +H+ LLYNKDATQH+FEV+AGLDSLV
Sbjct: 146 RMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDATQHIFEVSAGLDSLV 205

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           LGEGQILA            +GFG+ +SG+FK AI+ GKRVR+ETNI            E
Sbjct: 206 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVE 265

Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
           LA MKL +SS   AR+ VIG+GKMG+LVIK+L AKGC K+V+VNR+EE+V+AIR EM   
Sbjct: 266 LALMKLPQSSNVSARMCVIGAGKMGKLVIKHLMAKGCTKVVVVNRSEERVSAIREEMPGI 325

Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVS-QGARRRLFIDISMPRN 375
           +I++RPL EML CA+EADV+FTSTASE+PLF KE+VE LP  S +    R F+DIS+PRN
Sbjct: 326 EIIYRPLDEMLACASEADVVFTSTASETPLFLKEHVENLPQASPEVGGLRHFVDISVPRN 385

Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
           V   V ++ETA VYNVDDL+EVVAANKEDR++KAMEA+ II EE  +FEAW+DSLETVPT
Sbjct: 386 VGSCVGEVETARVYNVDDLKEVVAANKEDRMRKAMEAQTIITEESTQFEAWRDSLETVPT 445

Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
           IKK RAYAERI  +E+EKC+SKMG+DI+K+   A+  L  GIVN+ LHGPMQHLRCDG+D
Sbjct: 446 IKKLRAYAERIRVAELEKCMSKMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHLRCDGSD 505

Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMERVQK 535
           +R LSE LENM ALNRMY LE +  ++EEK+KA  E+ QK
Sbjct: 506 SRTLSETLENMHALNRMYGLEKD--ILEEKLKAMAEQQQK 543


>AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family
           protein | chr1:3237224-3239262 REVERSE LENGTH=530
          Length = 530

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 294/458 (64%), Positives = 364/458 (79%), Gaps = 7/458 (1%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           A DRYTKE+SSI+ IGL++HTAPVE+REKLAI E +WP+ I ELCGLNHIEEAAVLSTCN
Sbjct: 77  AIDRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCN 136

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           R+EIYV+ALSQ+RGV+EVT+WMSK SG+P+ E+ +H+ LLYNKD TQH+FEV+AGLDSLV
Sbjct: 137 RMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDVTQHIFEVSAGLDSLV 196

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           LGEGQILA            +GFG+ +SG+FK AI+ GKRVR+ETNI            E
Sbjct: 197 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 256

Query: 257 LAQMKLSESSFA-DARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKD 315
           LA MKL ESS A  AR+LV+G+GKMG+LVIK+L AKGC KMV+VNR+EEKV A+R EM  
Sbjct: 257 LALMKLPESSHASSARMLVVGAGKMGKLVIKHLVAKGCTKMVVVNRSEEKVAAVRNEMPP 316

Query: 316 A-DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPR 374
             +I+++PL EML CAAEADV+FTSTASE+PLF KE VE LP V      RLF+DIS+PR
Sbjct: 317 GVEIIYKPLDEMLSCAAEADVVFTSTASETPLFLKEQVETLPPVRDA---RLFVDISVPR 373

Query: 375 NVEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVP 434
           NV   V++++   V+NVDDL+EVVAANKEDR++KAM+A+ II +E   FEAW+DSLETVP
Sbjct: 374 NVGSCVAEIDGTRVFNVDDLKEVVAANKEDRVRKAMDAQAIITDESKHFEAWRDSLETVP 433

Query: 435 TIKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGN 494
           TIKK R Y ERI ++E+EK L KMG D++K+ +  +  L  GIVNKLLHGPMQHLRCDGN
Sbjct: 434 TIKKLRGYTERIIAAEIEKSLPKMGIDMNKKMRKTVDDLIRGIVNKLLHGPMQHLRCDGN 493

Query: 495 DNRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
           D+R LSE L+NM+ALNRMY L+ E  ++EEKI+AK+E+
Sbjct: 494 DSRTLSETLDNMQALNRMYGLDAE--ILEEKIRAKVEK 529


>AT2G31250.1 | Symbols: HEMA3 | Glutamyl-tRNA reductase family
           protein | chr2:13319702-13321526 REVERSE LENGTH=524
          Length = 524

 Score =  500 bits (1287), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/457 (55%), Positives = 342/457 (74%), Gaps = 6/457 (1%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           A DRYT+E+SSI+ IGL+ HT+P+E+RE+LAI E +WP  I +LC LNHIEEAAVLSTCN
Sbjct: 72  AIDRYTRERSSIVVIGLSFHTSPLEMRERLAIPEAEWPLAITQLCALNHIEEAAVLSTCN 131

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           RIEIYV ALS+ RGV+EVT+WMSK SG+P+ ++ +H+ LLYNKDATQHLF+V+AGL+SLV
Sbjct: 132 RIEIYVSALSRYRGVKEVTEWMSKRSGIPVSDICQHRFLLYNKDATQHLFQVSAGLESLV 191

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           +GE QI +             GFG+++S +F++A  AGKRVR++TNI            E
Sbjct: 192 IGENQIQS-QVRKAEQVVKQEGFGRIISTLFEKANKAGKRVRAQTNIASGAVSVSSAAVE 250

Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
           LA  KL   S + A +LVIG+G+MG+ +I++L AKGC KMV++NR+E+KV AIR+EM+  
Sbjct: 251 LALTKLP-GSVSSAMMLVIGAGEMGKRIIEHLVAKGCTKMVVMNRSEDKVAAIRKEMQSG 309

Query: 317 -DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPRN 375
            +I+++PL E+L CAAEA+VIFTST+SE+PLF KE+VE LP        RLF+DIS+PRN
Sbjct: 310 VEIIYKPLDEILACAAEANVIFTSTSSETPLFLKEHVEILPPCP-ADYARLFVDISVPRN 368

Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
           V   V++L++A VYNVDDL+EVVAANKEDR +K+MEA  II+EE  +FE W+DSL+T PT
Sbjct: 369 VGSCVAELDSARVYNVDDLKEVVAANKEDRARKSMEALPIIREETIEFEGWRDSLQTFPT 428

Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
           I+K R+  ERI +  VEK +SK GN + K+ ++A+      IVN +L  PM+HLR DG  
Sbjct: 429 IRKLRSKTERIRAECVEKLISKHGNGMDKKTREAVEKQTRIIVNNILDYPMKHLRYDGTG 488

Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
           +  L E LENM+A+NR+Y+L+ E  L+EEKI+ K ++
Sbjct: 489 SSKLRETLENMQAVNRIYELDGE--LLEEKIREKKDK 523