Miyakogusa Predicted Gene

Lj4g3v0388280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0388280.1 Non Chatacterized Hit- tr|I1JDV6|I1JDV6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.66,0,seg,NULL;
Med25_VWA,Mediator complex, subunit Med25, von Willebrand factor type
A; OS09G0306700 PROT,NODE_35263_length_2214_cov_94.314812.path2.1
         (685 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G25540.1 | Symbols: PFT1 | phytochrome and flowering time reg...   669   0.0  
AT1G25540.2 | Symbols: PFT1 | phytochrome and flowering time reg...   524   e-149

>AT1G25540.1 | Symbols: PFT1 | phytochrome and flowering time
           regulatory protein (PFT1) | chr1:8969392-8974446 REVERSE
           LENGTH=836
          Length = 836

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/694 (55%), Positives = 466/694 (67%), Gaps = 35/694 (5%)

Query: 1   MAAE-KQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYN 59
           M++E KQLIV  E TAA+GPYW TI++DYLEKIIRSF G+E  G++   S VE +LV +N
Sbjct: 1   MSSEVKQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFN 60

Query: 60  THGCYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGLSEALMMF--PNSQSG 117
           +HG Y   LVQR+GWTR+ D+F  WLS + F GGGFN+ A AEGL+EALMMF  P+ Q+ 
Sbjct: 61  SHGSYCACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQ 120

Query: 118 SPNQQNVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNRLYDAEAVAKAF 177
             N    D+ +HCIL+ ASNP+ L TPVY PR Q++E++E  D+   +RL DAE VA  F
Sbjct: 121 PSN----DLKRHCILITASNPHILPTPVYRPRLQNVERNENGDAQAESRLSDAETVASYF 176

Query: 178 PQFSISLSVICPKQLPKVKAIYNAGKRTSRAADPPVDV-KTTHFLVLISEAFREASSALS 236
            + S+SLSV+CPKQLP ++A+YNAGK   ++AD  +D  K T +LVLISE F EA +ALS
Sbjct: 177 AKCSVSLSVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALS 236

Query: 237 RSGITSLPSNQSPVKVDAVSVTP---VTGAPPTSLPSVNGSIASRQPISAGNVAPATVKV 293
            S  T+LP  QSPVKVD  +V P   VTG PP  + S NG I +RQP+S G V  ATVKV
Sbjct: 237 HSA-TNLPQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVGPVPTATVKV 295

Query: 294 EPVPVTSMVAGPAFPHNSSVPRAAITGQGIXXXXXXXXXXXXXDIMTNTENGQDTKPMA- 352
           EP  VTSM   P+FPH  +V R A   Q I             D+++N EN  D KP+  
Sbjct: 296 EPSTVTSMAPVPSFPHIPAVARPAT--QAIPSIQTSSASPVSQDMVSNAENAPDIKPVVV 353

Query: 353 SMLQQPLRPVNPAQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMIS 412
           S +  PLR   P  ANVN+LNNLSQ RQVM+SAAL+G  S    S+GQ+ VAMHMSNMIS
Sbjct: 354 SGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAMHMSNMIS 409

Query: 413 SGMASSVPAAQNVFXXXXXXXXXXXXXXXLTAPAQVGQXXXXXXXXXXXXXXXXXXXVGI 472
           +GMA+S+P +Q VF               L   AQ GQ                   +G+
Sbjct: 410 TGMATSLPPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTSNVASNLGV 469

Query: 473 SQPLSNLQGAVSMGQQVPGMSQGNISGTXXXXXXXXXXXXXXXXLGQSVVSSGNGTMIPT 532
           SQP+  +    + G     M QG IS                  LGQ  VSSG G M+PT
Sbjct: 470 SQPMQGM----NQGSHSGAMMQGGIS----------MNQNMMSGLGQGNVSSGTGGMMPT 515

Query: 533 PGMSQQVQSGVQPL--VNNAAANMTLPQQTSGGMQATQSKYLKVWEGSLSGQRQGQPVFI 590
           PG+ QQ QSG+Q L   N++A NM L Q +SG MQ +QSKY+KVWEG+LSGQRQGQPV I
Sbjct: 516 PGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQPVLI 575

Query: 591 TKLEGYRSASAPETIAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQL 650
           T+LEGYRSASA +++AANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAM+ HGFLGQL
Sbjct: 576 TRLEGYRSASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQL 635

Query: 651 QEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 684
           Q+KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG
Sbjct: 636 QDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 669


>AT1G25540.2 | Symbols: PFT1 | phytochrome and flowering time
           regulatory protein (PFT1) | chr1:8969392-8973301 REVERSE
           LENGTH=727
          Length = 727

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 319/585 (54%), Positives = 384/585 (65%), Gaps = 34/585 (5%)

Query: 109 MMF--PNSQSGSPNQQNVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNR 166
           MMF  P+ Q+    Q + D+ +HCIL+ ASNP+ L TPVY PR Q++E++E  D+   +R
Sbjct: 1   MMFSPPSGQA----QPSNDLKRHCILITASNPHILPTPVYRPRLQNVERNENGDAQAESR 56

Query: 167 LYDAEAVAKAFPQFSISLSVICPKQLPKVKAIYNAGKRTSRAADPPVDV-KTTHFLVLIS 225
           L DAE VA  F + S+SLSV+CPKQLP ++A+YNAGK   ++AD  +D  K T +LVLIS
Sbjct: 57  LSDAETVASYFAKCSVSLSVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLIS 116

Query: 226 EAFREASSALSRSGITSLPSNQSPVKVDAVSVTP---VTGAPPTSLPSVNGSIASRQPIS 282
           E F EA +ALS S  T+LP  QSPVKVD  +V P   VTG PP  + S NG I +RQP+S
Sbjct: 117 ENFVEACAALSHSA-TNLPQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVS 175

Query: 283 AGNVAPATVKVEPVPVTSMVAGPAFPHNSSVPRAAITGQGIXXXXXXXXXXXXXDIMTNT 342
            G V  ATVKVEP  VTSM   P+FPH  +V R A   Q I             D+++N 
Sbjct: 176 VGPVPTATVKVEPSTVTSMAPVPSFPHIPAVARPAT--QAIPSIQTSSASPVSQDMVSNA 233

Query: 343 ENGQDTKPMA-SMLQQPLRPVNPAQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQT 401
           EN  D KP+  S +  PLR   P  ANVN+LNNLSQ RQVM+SAAL+G  S    S+GQ+
Sbjct: 234 ENAPDIKPVVVSGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQS 289

Query: 402 PVAMHMSNMISSGMASSVPAAQNVFXXXXXXXXXXXXXXXLTAPAQVGQXXXXXXXXXXX 461
            VAMHMSNMIS+GMA+S+P +Q VF               L   AQ GQ           
Sbjct: 290 AVAMHMSNMISTGMATSLPPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQ 349

Query: 462 XXXXXXXXVGISQPLSNLQGAVSMGQQVPGMSQGNISGTXXXXXXXXXXXXXXXXLGQSV 521
                   +G+SQP+  +    + G     M QG IS                  LGQ  
Sbjct: 350 TTSNVASNLGVSQPMQGM----NQGSHSGAMMQGGIS----------MNQNMMSGLGQGN 395

Query: 522 VSSGNGTMIPTPGMSQQVQSGVQPL--VNNAAANMTLPQQTSGGMQATQSKYLKVWEGSL 579
           VSSG G M+PTPG+ QQ QSG+Q L   N++A NM L Q +SG MQ +QSKY+KVWEG+L
Sbjct: 396 VSSGTGGMMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNL 455

Query: 580 SGQRQGQPVFITKLEGYRSASAPETIAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFR 639
           SGQRQGQPV IT+LEGYRSASA +++AANWPP MQIVRLISQDHMNNKQYVGKADFLVFR
Sbjct: 456 SGQRQGQPVLITRLEGYRSASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFR 515

Query: 640 AMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 684
           AM+ HGFLGQLQ+KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG
Sbjct: 516 AMSQHGFLGQLQDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 560