Miyakogusa Predicted Gene

Lj4g3v0385800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0385800.1 Non Chatacterized Hit- tr|I1KL47|I1KL47_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.05,0,GDI,GDP
dissociation inhibitor; RAB GDP-DISSOCIATION INHIBITOR,NULL; no
description,NULL; RABGDIREP,,CUFF.47022.1
         (203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09550.1 | Symbols:  | GDP dissociation inhibitor family prot...   378   e-105
AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleot...   332   9e-92
AT2G44100.2 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleot...   332   1e-91
AT3G59920.1 | Symbols: ATGDI2, GDI2 | RAB GDP dissociation inhib...   328   2e-90
AT3G06540.1 | Symbols: REP, AthREP | Rab escort protein | chr3:2...    79   3e-15

>AT5G09550.1 | Symbols:  | GDP dissociation inhibitor family protein
           / Rab GTPase activator family protein |
           chr5:2963850-2966465 FORWARD LENGTH=445
          Length = 445

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/203 (89%), Positives = 192/203 (94%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           MIPKF+MANG LV+ LIHTDVTKYLNFKAVDGSFVY KGKIYKVPATDVEALKSPLMGLF
Sbjct: 75  MIPKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIYKVPATDVEALKSPLMGLF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRARKFFIYVQDY+  DPKSHEGLDL++VTAR++ISKYGLEDDTIDFIGHALALH DD
Sbjct: 135 EKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGLEDDTIDFIGHALALHNDD 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
            YLD PA DFV+RIK+YAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 DYLDQPAIDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD +GKAIGVTS GETAK
Sbjct: 255 ECKVEFDGSGKAIGVTSAGETAK 277


>AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleotide
           diphosphate dissociation inhibitor 1 |
           chr2:18241804-18244864 FORWARD LENGTH=445
          Length = 445

 Score =  332 bits (852), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 157/203 (77%), Positives = 182/203 (89%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           M+PKFMMANG LVRVLIHTDVTKYL+FKAVDGS+V+ +GK+ KVPAT +EALKSPLMG+F
Sbjct: 75  MMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPATPMEALKSPLMGIF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRA KFF YVQ+Y+  DPK+H+G+DL +VT + LI+K+GL++DTIDFIGHA+ALH +D
Sbjct: 135 EKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGLKEDTIDFIGHAVALHCND 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
           ++L  PA D V R+K+YAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 NHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD  GK  GVTSEGETAK
Sbjct: 255 ECKVEFDEEGKVSGVTSEGETAK 277


>AT2G44100.2 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleotide
           diphosphate dissociation inhibitor 1 |
           chr2:18241804-18244731 FORWARD LENGTH=431
          Length = 431

 Score =  332 bits (851), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 157/203 (77%), Positives = 182/203 (89%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           M+PKFMMANG LVRVLIHTDVTKYL+FKAVDGS+V+ +GK+ KVPAT +EALKSPLMG+F
Sbjct: 75  MMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPATPMEALKSPLMGIF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRA KFF YVQ+Y+  DPK+H+G+DL +VT + LI+K+GL++DTIDFIGHA+ALH +D
Sbjct: 135 EKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGLKEDTIDFIGHAVALHCND 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
           ++L  PA D V R+K+YAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 NHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD  GK  GVTSEGETAK
Sbjct: 255 ECKVEFDEEGKVSGVTSEGETAK 277


>AT3G59920.1 | Symbols: ATGDI2, GDI2 | RAB GDP dissociation
           inhibitor 2 | chr3:22135157-22138221 FORWARD LENGTH=444
          Length = 444

 Score =  328 bits (840), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 155/203 (76%), Positives = 179/203 (88%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           M+PKFMM NG LVR LIHTDVTKYL+FKAVDGS+V+ KGK+ KVPAT +EALKS LMG+F
Sbjct: 75  MMPKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVFVKGKVQKVPATPMEALKSSLMGIF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRA KFF +VQ+Y+  DPK+H+G+DL +VT ++LI+KYGL+ +TIDFIGHA+ALH +D
Sbjct: 135 EKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTKELIAKYGLDGNTIDFIGHAVALHTND 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
            +LD PA D V R+K+YAESLARFQG SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 QHLDQPAFDTVMRMKLYAESLARFQGTSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD  GK IGVTSEGETAK
Sbjct: 255 ECKVEFDEGGKVIGVTSEGETAK 277


>AT3G06540.1 | Symbols: REP, AthREP | Rab escort protein |
           chr3:2035201-2037662 REVERSE LENGTH=563
          Length = 563

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 28/199 (14%)

Query: 3   PKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNK-GKIYKVPATDVEALKSPLMGLFE 61
           P+ +      + +++ +    Y+ FK++D SFV +  G++  VP +     K   + L E
Sbjct: 127 PRVVFCADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLE 186

Query: 62  KRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIG---------- 111
           K +  KFF  VQ +  S   S E  D   V     IS+  +E   +DF+           
Sbjct: 187 KNQLMKFFKLVQSHLAS---STEKDDSTTVK----ISEEDMESPFVDFLSKMRLPPKIKS 239

Query: 112 ---HALA-LHLDDSYLDT-----PAKDFVERIKVYAESLARFQGG-SPYIYPLYGLGELP 161
              +A+A L  D    +T       K+ ++R+ +Y  S+ RF       IYP+YG GELP
Sbjct: 240 IILYAIAMLDYDQDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELP 299

Query: 162 QAFARLSAVYGGTYMLNKP 180
           QAF R +AV G  Y+L  P
Sbjct: 300 QAFCRRAAVKGCIYVLRMP 318