Miyakogusa Predicted Gene

Lj4g3v0365710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0365710.1 Non Chatacterized Hit- tr|Q84NQ5|Q84NQ5_ORYSJ
Putative uncharacterized protein P0034A04.119
OS=Oryza,29.36,1e-16,seg,NULL,CUFF.47017.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58120.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   146   3e-35
AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-26525...    57   3e-08

>AT1G58120.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast
           hits to 93 proteins in 15 species: Archae - 0; Bacteria
           - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr1:21520962-21522224 FORWARD LENGTH=420
          Length = 420

 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 188/419 (44%), Gaps = 58/419 (13%)

Query: 22  IKVPDAQVLRIVSRSLFLALVFATLPFLGSFLNGSVVSEFAAKSGSSINVEVLGLILHDL 81
           +K   ++VL +  RS  LAL+F +  +L S L     +   +KS  S   E+L L+L+DL
Sbjct: 38  LKASRSEVLSLFMRSTLLALLFLSFTWL-SLLKYGTTATAPSKSVESDLPELLPLLLNDL 96

Query: 82  GEEGLLRKEDKALILN------TPRGFKGGVALLNW------DNEV-NVVMDESYDFVIT 128
            ++GL +  DKAL L+      T   +   V   +       D E+ ++V DE++DF   
Sbjct: 97  EKQGLFKMGDKALFLSGGDDEVTVSSYSQTVIETDMLLVSASDQEMQSMVPDETFDFAFA 156

Query: 129 PS--FEDAVFADSVLKVNGIVAFPLSDNASGSGFRKQSHYKVVYLRRYGEIFVALRKIGL 186
            S   + A F D  LKV GI    L+       F K  +Y++VY++      + +RK G 
Sbjct: 157 HSRHIDSAEFIDRTLKVGGIFTVQLNLQDLPPNFLKHPNYEIVYVKSSEYTVMTMRKTGE 216

Query: 187 ANKNLVDSSPKRKLCQFTTETKXXXXXXXXXXXXXXXXXXDSSPK--RKLCQFTTETKXX 244
             +     +  RKL   T E                    D+  K  RKL     E    
Sbjct: 217 TEQKQSLVATGRKLLGITEE--------------------DAREKALRKLEDVLLEPPRA 256

Query: 245 XXXXXXXXXXXXXXXXVDNSNKNLKIKYLPELLDDSL--EGYKRRVFIGVGLREENKAAV 302
                                   + +YLP+L+ D+L  E Y RRVFI VG   +  + +
Sbjct: 257 ASRKSRTYFK--------------RTRYLPDLMGDNLDLESYSRRVFIDVG-NGKGSSGM 301

Query: 303 EWFERNYPKKGTKFQIHSLLVAPEEDLPVPHSADFSDWLSKHXXXXXXXXXXXXXXXXXX 362
           EWF  NYP +  KF+++ +    +E          ++WL ++                  
Sbjct: 302 EWFVENYPTRNQKFEMYKIETVNDEMSLESEKMGMTEWLKENVKEEEYVVMKAEAEMVEE 361

Query: 363 XXXXRTIYLVDELFLECNNEWWQ-TGK--QKKSRRAYWECLALYGRLRDEGVAVHQWWG 418
               ++I +VDELFLEC  +     G+  Q KS RAYWECLALYG+LRDEGVAVHQWWG
Sbjct: 362 MMRSKSIKMVDELFLECKPKGLGLRGRKMQSKSGRAYWECLALYGKLRDEGVAVHQWWG 420


>AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-265250
           REVERSE LENGTH=513
          Length = 513

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 336 DFSDWLSKHXXXXXXXXXXXXXXXXXXXXXXR-----TIYLVDELFLECNNEWWQTG--- 387
           DF+DWL K                       R      I L+DELFLEC+   WQ     
Sbjct: 423 DFADWLKKSVRERDFVVMKMDVEGTEFDLIPRLIKTGAICLIDELFLECHYNRWQRCCPG 482

Query: 388 -KQKKSRRAYWECLALYGRLRDEGVAVHQWW 417
            + +K  + Y +CL L+  LR  GV VHQWW
Sbjct: 483 QRSQKYNKTYNQCLELFNSLRQRGVLVHQWW 513