Miyakogusa Predicted Gene

Lj4g3v0353440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0353440.1 tr|Q3C1F4|Q3C1F4_LOTJA Nonsymbiotic hemoglobin
OS=Lotus japonicus GN=LjHb1 PE=2
SV=1,99.38,0,PLANT_GLOBIN,Leghaemoglobin, iron-binding site;
PLANTGLOBIN,Leghaemoglobin; no description,Globin, s,gene.g52151.t1.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB...   264   2e-71
AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB...   170   5e-43

>AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB1 |
           hemoglobin 1 | chr2:6982782-6983522 REVERSE LENGTH=160
          Length = 160

 Score =  264 bits (674), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/160 (78%), Positives = 141/160 (88%)

Query: 1   MSTLGSTCFTEEQEALVVKSWSVMKKNSAELGLKLFLKIFEIAPSAQKLFSFLRDSKVPL 60
           M + G   FTEEQEALVVKSWSVMKKNSAELGLKLF+KIFEIAP+ +K+FSFLRDS +P 
Sbjct: 1   MESEGKIVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPA 60

Query: 61  EENPKLKPHAMSVFVMTCESAAQLRKAGKVTVRESTLKKLGATHYKYGVVNEHFEVTKFA 120
           E+NPKLKPHAMSVFVM CESA QLRK GKVTVRE+TLK+LGA+H KYGVV+EHFEV K+A
Sbjct: 61  EQNPKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYA 120

Query: 121 LLDTIKEAVPEMWSPEMKNAWTQAYDQLVGAIKSEMKPSS 160
           LL+TIKEAVPEMWSPEMK AW QAYD LV AIK+EM  S+
Sbjct: 121 LLETIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEMNLSN 160


>AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB2 |
           haemoglobin 2 | chr3:3276516-3277765 REVERSE LENGTH=158
          Length = 158

 Score =  170 bits (430), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 84/158 (53%), Positives = 112/158 (70%)

Query: 4   LGSTCFTEEQEALVVKSWSVMKKNSAELGLKLFLKIFEIAPSAQKLFSFLRDSKVPLEEN 63
           +G   FTE+QEALV +SW ++K++  +  L  F +I EIAP+A+ LFSFLRDS      N
Sbjct: 1   MGEIGFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNN 60

Query: 64  PKLKPHAMSVFVMTCESAAQLRKAGKVTVRESTLKKLGATHYKYGVVNEHFEVTKFALLD 123
           PKLK HA+ VF MTCE+A QLR+ GKV V ++TL+ LG+ H K GV++ HFEV K ALL 
Sbjct: 61  PKLKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLR 120

Query: 124 TIKEAVPEMWSPEMKNAWTQAYDQLVGAIKSEMKPSSS 161
           T+KE + E ++ E++ AW+QAYD L  AIK+EMK   S
Sbjct: 121 TLKEGLGEKYNEEVEGAWSQAYDHLALAIKTEMKQEES 158