Miyakogusa Predicted Gene
- Lj4g3v0353410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0353410.1 Non Chatacterized Hit- tr|I1LJH9|I1LJH9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.89,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,gene.g52148.t1.1
(642 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 708 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 373 e-103
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 4e-94
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 337 1e-92
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 3e-92
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 335 5e-92
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 322 6e-88
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 8e-86
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 315 9e-86
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 315 9e-86
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 309 4e-84
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 2e-82
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 303 3e-82
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 303 3e-82
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 7e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 300 1e-81
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 300 2e-81
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 5e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 299 5e-81
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 298 8e-81
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 295 6e-80
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 291 1e-78
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 286 3e-77
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 286 4e-77
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 285 7e-77
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 283 2e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 280 2e-75
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 5e-75
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 8e-75
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 278 8e-75
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 1e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 277 1e-74
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 8e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 7e-73
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 268 8e-72
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 4e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 266 5e-71
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 265 6e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 264 1e-70
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 6e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 254 1e-67
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 254 1e-67
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 253 3e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 249 6e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 247 2e-65
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 5e-65
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 245 6e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 7e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 233 3e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 233 3e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 3e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 6e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 4e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 8e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 1e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 5e-48
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 188 8e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 3e-47
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 97 3e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 89 8e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 8e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 5e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 4e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 73 7e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 3e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 4e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 52 1e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 5e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 6e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/637 (53%), Positives = 461/637 (72%), Gaps = 13/637 (2%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSAS-HRDLVSYNSMLSAYAGADGCDTVALD 59
M RN +SWNA+I AY+K +N+ +AR LF+S + RDL++YN++LS +A DGC++ A++
Sbjct: 49 MLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIE 108
Query: 60 LFARM-QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
+F M + +D I +D+ T+TTM+ LSAKL V YG+Q+H +VKT ND +KFA+SSLI
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 119 MYSKCGSFREAYNVFSG-CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
MYSKCG F+E N+F+G C VD V++NAM+AA CR+G +D AL+VFW+NPE NDT+SW
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
NTLIAGY QNGY E AL + + M E G+++++H+ +VL+ + LK LK+GK VHA VLK
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 238 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 297
N SN+FVSSGIVD YCKCGNM+YAES + G + ++ SS+I GYSS+G M +AKRL
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 298 FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
FDSLSE+N VVWTA+ GY+ +Q ++V +L R F E PD++++V+VLGAC++QA
Sbjct: 349 FDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAY 408
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
+ GK+ H + LRT + MD+KL +A VDMYSKCGN+ YAE+ F + +RD ++YN MI
Sbjct: 409 MEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNAMI 466
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
AG AHHG E K+ Q F++M + KPD ITF+ALLSACRHRGLV GEK+F SM E YN+
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKI-PIQIDASIWGAFLNACKINNNTTLVKQAE 536
PE HY CM+D+YG+ +L+KA+E M I ++ DA I GAFLNAC N NT LVK+ E
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVE 586
Query: 537 EELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVF 596
E+LL +E NGSRY+Q+AN YA+ G+W+EM RIR +MRGKE GCSW ++ H+F
Sbjct: 587 EKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMF 646
Query: 597 TSGDTSHSKADAIYSTLVCLYGKLYLTFTELKQLDEI 633
TS D SH + +AIY+ L+ +L ++DEI
Sbjct: 647 TSSDISHYETEAIYAM-------LHFVTKDLSEIDEI 676
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 216/470 (45%), Gaps = 55/470 (11%)
Query: 98 HSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD--LVSKNAMVAACCRD 155
H +K+ + L+ + + L+++YSK G REA NVF D +++ + S NA++AA +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVF---DEMLERNVYSWNAVIAAYVKF 67
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ-NGYMERALTLFIEMIEK---GIEYNQHT 211
+ A +F + D +++NTL++G+ + +G A+ +F EM K I + T
Sbjct: 68 NNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 212 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG-- 269
+ +++ L + G+ +H +++K +F S ++ Y KCG + +++ G
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 270 IGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV-WTALCSGYVKSQQCEAVFKL 328
+ A +++IA Y +G++ KA +F E N + W L +GY ++ E K+
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
L D VL + +L +GK+ HA +L+ ++ ++S +VD+Y
Sbjct: 248 AVSMEEN-GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNV--MIAGYAHHGFENKAIQLFQEMLKISL----- 441
KCGN+ YAE + L + LY+ MI GY+ G +A +LF + + +L
Sbjct: 307 KCGNMKYAESAHLLYGFGN----LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTA 362
Query: 442 ---------------------------KPDAITFVALLSACRHRGLVELGEKFF-MSMKE 473
PD++ V++L AC + +E G++ S++
Sbjct: 363 MFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNAC 523
+L + VDMY + +E A E + + D ++ A + C
Sbjct: 423 --GILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGC 469
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 222 LKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 281
+KCLK G H +K+ S+ +V+ Y K G +R A +V+ + ++ ++ +++
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 282 IAGYSSKGNMTKAKRLFDSLS-ERNYVVWTALCSGYVKSQQCEA-VFKLFREFRTTEA-- 337
IA Y N+ +A+ LF+S + ER+ + + L SG+ K+ CE+ ++F E E
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+ D + ++ A + G+Q H +++T + + S+L+ MYSKCG
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
F D + N MIA Y G +KA+ +F +++ D I++ L++
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQ 237
Query: 458 RGLVELGEKFFMSMKED 474
G E K +SM+E+
Sbjct: 238 NGYEEEALKMAVSMEEN 254
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/627 (36%), Positives = 347/627 (55%), Gaps = 46/627 (7%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN ++WN+++ K L +A +LF S RD ++NSM+S +A D C+ AL
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE-ALCY 139
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
FA M ++ ++E + ++L+ + L + G Q+HS + K+ + S+L+DMY
Sbjct: 140 FAMMH--KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCG+ +A VF D + D + VSWN+L
Sbjct: 198 SKCGNVNDAQRVF---DEMGD------------------------------RNVVSWNSL 224
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I + QNG AL +F M+E +E ++ TLASV+SAC L +K+G+ VH V+KND
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 241 CSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
N + S+ VD Y KC ++ A ++ + I++ A +S+I+GY+ + A+ +F
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
++ERN V W AL +GY ++ + E LF + E++ P N+L ACA A L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR-ESVCPTHYSFANILKACADLAELH 403
Query: 360 LGKQTHAYILRTKLNM------DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
LG Q H ++L+ D + ++L+DMY KCG + F+ + + RD + +
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME--RDCVSW 461
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
N MI G+A +G+ N+A++LF+EML+ KPD IT + +LSAC H G VE G +F SM
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVK 533
D+ V P HY CMVD+ GR LE+A + ++P+Q D+ IWG+ L ACK++ N TL K
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
E+LL+VE N YV L+N+YA GKW ++ +RK MR + TK PGCSWI ++
Sbjct: 582 YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD 641
Query: 594 HVFTSGDTSHSKADAIYSTLVCLYGKL 620
HVF D SH + I+S L L ++
Sbjct: 642 HVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 225/480 (46%), Gaps = 87/480 (18%)
Query: 84 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 143
+ +KL + Y + +H+ ++K+ F + LID YSKCGS + VF ++
Sbjct: 30 IKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ-RNIY 87
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 203
+ N++V + G +D A ++F PE D +WN++++G+ Q+ E AL F M ++
Sbjct: 88 TWNSVVTGLTKLGFLDEADSLFRSMPE-RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE 146
Query: 204 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
G N+++ ASVLSAC+GL + G VH+L+ K+ S+ ++ S +VD Y KCGN+ A
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS-QQC 322
+ V+ D + +RN V W +L + + ++
Sbjct: 207 QRVF-------------------------------DEMGDRNVVSWNSLITCFEQNGPAV 235
Query: 323 EA--VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDEKL 379
EA VF++ E R PD + + +V+ ACA + + +G++ H +++ KL D L
Sbjct: 236 EALDVFQMMLESRVE----PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 380 ASALVDMYSKCGNIAYAEKSFQ-----------------------------LVTDSDRDV 410
++A VDMY+KC I A F ++R+V
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF--- 467
+ +N +IAGY +G +A+ LF + + S+ P +F +L AC + LG +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 468 -------FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
F S +ED +I+ ++DMY + +E+ RK+ ++ D W A +
Sbjct: 412 VLKHGFKFQSGEED-----DIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/623 (35%), Positives = 348/623 (55%), Gaps = 10/623 (1%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R AFSWN ++ AY K ++ FD RD VS+ +M+ Y G A+ +
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI-GQYHKAIRV 133
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
M ++ I + TLT +L A R + GK++HS++VK + +SL++MY
Sbjct: 134 MGDM--VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG A VF V D+ S NAM+A + G+MD+A+ F + E D V+WN++
Sbjct: 192 AKCGDPMMAKFVFDRM-VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSM 249
Query: 181 IAGYVQNGYMERALTLFIEMIEKGI-EYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
I+G+ Q GY RAL +F +M+ + ++ TLASVLSAC L+ L +GK +H+ ++
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--PFATSSLIAGYSSKGNMTKAKRL 297
+ V + ++ Y +CG + A + G K ++L+ GY G+M +AK +
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 298 FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
F SL +R+ V WTA+ GY + LFR P++ + +L + A+
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAAMLSVASSLAS 428
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
LS GKQ H +++ +++AL+ MY+K GNI A ++F L+ +RD + + MI
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR-CERDTVSWTSMI 487
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
A HG +A++LF+ ML L+PD IT+V + SAC H GLV G ++F MK+ +
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEE 537
+P + HYACMVD++GR L++A EF+ K+PI+ D WG+ L+AC+++ N L K A E
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 538 ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFT 597
LL +E +N Y LAN+Y+A GKW E +IRK M+ K G SWI V++ +HVF
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Query: 598 SGDTSHSKADAIYSTLVCLYGKL 620
D +H + + IY T+ ++ ++
Sbjct: 668 VEDGTHPEKNEIYMTMKKIWDEI 690
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 139/283 (49%), Gaps = 39/283 (13%)
Query: 211 TLASVLSACTGLKCLKLGKC--------VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 262
+L+++L CT L + K VH V+K+ + ++ + +++ Y K G +
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 322
A ++ + +++ F+ +++++ YS +G+M FD L +R+ V WT + GY Q
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 382
++ + E + P + NVL + A + GK+ H++I++ L + ++++
Sbjct: 128 HKAIRVMGDM-VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 383 LVDMYSKCGNIAYAEKSF-----------------------------QLVTDSDRDVILY 413
L++MY+KCG+ A+ F Q ++RD++ +
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSAC 455
N MI+G+ G++ +A+ +F +ML+ S L PD T ++LSAC
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 333/624 (53%), Gaps = 61/624 (9%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
A + Y K N+ A+ LFD++ + + SYN+M++ Y+ + AL LF R+ S+
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH-GFKALLLFHRLMSS--G 377
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
+G DEI+L+ + A ++ + G Q++ +K++ L ++ IDMY KC + EA+
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
VF D + + D VSWN +IA + QNG
Sbjct: 438 RVF-------DEMRRR--------------------------DAVSWNAIIAAHEQNGKG 464
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
L LF+ M+ IE ++ T S+L ACTG L G +H+ ++K+ SN V +
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
+D Y KCG + AE ++ S + G M + +++ + + V W
Sbjct: 524 IDMYSKCGMIEEAEKIH-----------SRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTE-ALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
++ SGYV +Q E LF R E + PD VL CA A+ LGKQ HA ++
Sbjct: 573 SIISGYVMKEQSEDAQMLFT--RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ +L D + S LVDMYSKCG++ + F+ RD + +N MI GYAHHG +A
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFE--KSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
IQLF+ M+ ++KP+ +TF+++L AC H GL++ G ++F MK DY + P++ HY+ MVD
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN-NNTTLVKQAEEELLKVEADNGS 548
+ G+ ++++A+E +R++P + D IW L C I+ NN + ++A LL+++ + S
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
Y L+NVYA G W ++ +R+ MRG + K PGCSW+ +++ +HVF GD +H + +
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEE 868
Query: 609 IYSTLVCLYGKLYLTFTELKQLDE 632
IY +L L ++E+K D+
Sbjct: 869 IYE-------ELGLIYSEMKPFDD 885
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 210/455 (46%), Gaps = 70/455 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ SWN +I Y K++++ +A + F+ RD+VS+NSMLS Y +G ++++
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL-QNGESLKSIEV 167
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M R+ I D T +L + + L G Q+H +V+ D A S+L+DMY
Sbjct: 168 FVDM--GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+K F E+ VF G + VS +A++A C
Sbjct: 226 AKGKRFVESLRVFQGIPE-KNSVSWSAIIAGC---------------------------- 256
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
VQN + AL F EM + +Q ASVL +C L L+LG +HA LK+D
Sbjct: 257 ----VQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
++ V + +D Y KC NM+ A+ LFD+
Sbjct: 313 AADGIVRTATLDMYAKCDNMQ-------------------------------DAQILFDN 341
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
N + A+ +GY + + LF ++ L D + + V ACA+ LS
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSE 400
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
G Q + +++ L++D +A+A +DMY KC +A A + F + RD + +N +IA +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM--RRRDAVSWNAIIAAH 458
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
+G + + LF ML+ ++PD TF ++L AC
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 220/445 (49%), Gaps = 46/445 (10%)
Query: 86 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSK 145
AK + GKQ H++M+ + + F L+ L+ +Y+ F A VF + D+VS
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP-LRDVVSW 117
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
N M+ + M A N F+ D VSWN++++GY+QNG +++ +F++M +GI
Sbjct: 118 NKMINGYSKSNDMFKA-NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 206 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAE 264
E++ T A +L C+ L+ LG +H +V++ GC V +S ++D Y K R+ E
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAK--GKRFVE 233
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
S+ R+F + E+N V W+A+ +G V++
Sbjct: 234 SL-----------------------------RVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
K F+E + A + + I +VL +CA + L LG Q HA+ L++ D + +A +
Sbjct: 265 ALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH--HGFENKAIQLFQEMLKISLK 442
DMY+KC N+ A+ F + +R YN MI GY+ HGF KA+ LF ++ L
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQS--YNAMITGYSQEEHGF--KALLLFHRLMSSGLG 379
Query: 443 PDAITFVALLSACRH-RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
D I+ + AC +GL E + + +++K ++ + + A +DMYG+ L +A
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAF 437
Query: 502 EFMRKIPIQIDASIWGAFLNACKIN 526
++ + DA W A + A + N
Sbjct: 438 RVFDEMR-RRDAVSWNAIIAAHEQN 461
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 6/287 (2%)
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
V C L+LGK HA ++ + FV + ++ Y + A V+ + ++
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+ + +I GYS +M KA F+ + R+ V W ++ SGY+++ + ++F +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM-G 172
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
E + D +L C+ SLG Q H ++R + D ASAL+DMY+K
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 395 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
+ + FQ + +++ + ++ +IAG + + A++ F+EM K++ + ++L +
Sbjct: 233 ESLRVFQGIP--EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 455 CRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
C + LG + ++K D+ I A + DMY + + ++ A
Sbjct: 291 CAALSELRLGGQLHAHALKSDF-AADGIVRTATL-DMYAKCDNMQDA 335
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 330/622 (53%), Gaps = 43/622 (6%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA--GADGCDTVAL 58
+P N FSWN +++AY KA +++ + F+ RD V++N ++ Y+ G G A
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
+ R SA T +TL TML LS+ V GKQ+H ++K + S L+
Sbjct: 127 NTMMRDFSANLT----RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
MY+ G +A VF G D + V N+++ G ++ AL +F + E D+VSW
Sbjct: 183 MYANVGCISDAKKVFYGLDDR-NTVMYNSLMGGLLACGMIEDALQLF-RGME-KDSVSWA 239
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
+I G QNG + A+ F EM +G++ +Q+ SVL AC GL + GK +HA +++
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
+ + +V S ++D YCKC + YA++V F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTV-------------------------------F 328
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
D + ++N V WTA+ GY ++ + E K+F + + + + PD + + ACA ++L
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTLGQAISACANVSSL 387
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
G Q H + + L ++++LV +Y KCG+I + + F + + RD + + M++
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM--NVRDAVSWTAMVS 445
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
YA G + IQLF +M++ LKPD +T ++SAC GLVE G+++F M +Y ++
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
P I HY+CM+D++ R +LE+A+ F+ +P DA W L+AC+ N + K A E
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAES 565
Query: 539 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 598
L++++ + + Y L+++YA++GKW+ + ++R+ MR K K PG SWI + +H F++
Sbjct: 566 LIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSA 625
Query: 599 GDTSHSKADAIYSTLVCLYGKL 620
D S D IY+ L L K+
Sbjct: 626 DDESSPYLDQIYAKLEELNNKI 647
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 223 KCLKLG--------KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
+C+ LG K +H +++ F+ + IV Y + YA V+ I +
Sbjct: 12 QCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPN 71
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
F+ ++L+ YS G +++ + F+ L +R+ V W L GY S A K +
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
+ + ++ +L + +SLGKQ H +++ + S L+ MY+ G I+
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 395 YAEKSF----------------------------QLVTDSDRDVILYNVMIAGYAHHGFE 426
A+K F QL ++D + + MI G A +G
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
+AI+ F+EM LK D F ++L AC G + G++ + N IY +
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSA 310
Query: 487 MVDMY 491
++DMY
Sbjct: 311 LIDMY 315
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 320/616 (51%), Gaps = 61/616 (9%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ SWN +I Y++ NL +AR LF+ RD+ S+N+MLS YA +GC A +
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA-QNGCVDDARSV 179
Query: 61 FARMQSARDTIGMDEITLTTMLNL---SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
F RM D ++ +L+ ++K+ C + K+ + + + + L+
Sbjct: 180 FDRMPEKND------VSWNALLSAYVQNSKMEEACM-------LFKSRENWALVSWNCLL 226
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
+ K EA F + V D+VS N ++ + GK+D A +F ++P D +W
Sbjct: 227 GGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKIDEARQLFDESP-VQDVFTW 284
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
+++GY+QN +E A LF +M E+
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER---------------------------------- 310
Query: 238 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 297
N+ + ++ Y + M A+ ++ + ++ +++I GY+ G +++AK L
Sbjct: 311 -----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 298 FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
FD + +R+ V W A+ +GY +S +LF + + + + L CA
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL-NRSSFSSALSTCADVVA 424
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
L LGKQ H +++ + +AL+ MY KCG+I A F+ + + +D++ +N MI
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMI 482
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
AGY+ HGF A++ F+ M + LKPD T VA+LSAC H GLV+ G ++F +M +DY V
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEE 537
+P HYACMVD+ GR LE A M+ +P + DA+IWG L A +++ NT L + A +
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 538 ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFT 597
++ +E +N YV L+N+YA+ G+W ++G++R MR K K+PG SWI ++N H F+
Sbjct: 603 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 662
Query: 598 SGDTSHSKADAIYSTL 613
GD H + D I++ L
Sbjct: 663 VGDEFHPEKDEIFAFL 678
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 30/289 (10%)
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
Y + G A V+ + S + + +I+GY G A++LFD + ER+ V W +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT-----------LSLGK 362
GYV+++ +LF + +TM+ C A +S
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 363 QTHAYILRTKLN-----MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD----RDVILY 413
AY+ +K+ + ALV G +K + D RDV+ +
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
N +I GYA G ++A QLF E S D T+ A++S +VE + F M E
Sbjct: 254 NTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
V + M+ Y +G ++E A E +P + + S W +
Sbjct: 310 RNEV-----SWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITG 352
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 321/626 (51%), Gaps = 54/626 (8%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F NA++ Y + +L+ AR +FD S D+VS+NS++ +YA G VAL++F+RM
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL-GKPKVALEMFSRM 219
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D ITL +L A L GKQ+H + V + + F + L+DMY+KCG
Sbjct: 220 TNEFGC-RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLI 181
EA VFS V D+VS NAMVA + G+ + A+ +F K E D V+W+ I
Sbjct: 279 MMDEANTVFSNMS-VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK---- 237
+GY Q G AL + +M+ GI+ N+ TL SVLS C + L GK +H +K
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 238 ---NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
N V + ++D Y KC + A
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKV-------------------------------DTA 426
Query: 295 KRLFDSLS--ERNYVVWTALCSGYVKSQQCEAVFKLFRE-FRTTEALIPDTMIIVNVLGA 351
+ +FDSLS ER+ V WT + GY + +L E F P+ I L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLAS-ALVDMYSKCGNIAYAEKSFQLVTDS--DR 408
CA A L +GKQ HAY LR + N S L+DMY+KCG+I+ A +LV D+ +
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA----RLVFDNMMAK 542
Query: 409 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 468
+ + + ++ GY HG+ +A+ +F EM +I K D +T + +L AC H G+++ G ++F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 469 MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNN 528
MK + V P HYAC+VD+ GR +L A+ + ++P++ +W AFL+ C+I+
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 529 TTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIY 588
L + A E++ ++ +++ Y L+N+YA G+W ++ RIR MR K K PGCSW+
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 589 VENGIHVFTSGDTSHSKADAIYSTLV 614
G F GD +H A IY L+
Sbjct: 723 GIKGTTTFFVGDKTHPHAKEIYQVLL 748
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 236/505 (46%), Gaps = 53/505 (10%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRD--LVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+I YI L+ A +L D + +NS++ +Y G +GC L LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLSW 123
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
T D T + ++ V G+ H+ + T + F ++L+ MYS+C S +A
Sbjct: 124 T--PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF V D+VS N+++ + + GK +AL +F +
Sbjct: 182 RKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTN------------------- 221
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E G + TL +VL C L LGK +H + ++ N FV +
Sbjct: 222 ------------EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----N 305
+VD Y KCG M A +V++ + +K + ++++AGYS G A RLF+ + E +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V W+A SGY + + R+ ++ + P+ + +++VL CA L GK+ H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 366 AYILRTKLNM------DEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
Y ++ +++ DE + + L+DMY+KC + A F ++ +RDV+ + VMI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 419 GYAHHGFENKAIQLFQEMLK--ISLKPDAITFVALLSACRHRGLVELGEKFFM-SMKEDY 475
GY+ HG NKA++L EM + +P+A T L AC + +G++ +++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKA 500
N +P ++ C++DMY + + A
Sbjct: 509 NAVP-LFVSNCLIDMYAKCGSISDA 532
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 34/324 (10%)
Query: 138 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV-SWNTLIAGYVQNGYMERALTL 196
G++ L + +++ G + A+++ + P + V WN+LI Y NG + L L
Sbjct: 55 GILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYL 114
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
F M + +T V AC + ++ G+ HAL L SN FV + +V Y +
Sbjct: 115 FGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
C +++ A+++FD +S + V W ++ Y
Sbjct: 175 C-------------------------------RSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
K + + ++F PD + +VNVL CA T SLGKQ H + + +++ +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
+ + LVDMY+KCG + A F + S +DV+ +N M+AGY+ G A++LF++M
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 437 LKISLKPDAITFVALLSACRHRGL 460
+ +K D +T+ A +S RGL
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGL 345
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 200/483 (41%), Gaps = 123/483 (25%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTV 56
M ++ SWNA++ Y + A LF+ D+V++++ +S YA G
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA-QRGLGYE 348
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK------ 110
AL + +M S+ I +E+TL ++L+ A + + +GK++H Y +K DL K
Sbjct: 349 ALGVCRQMLSS--GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 111 -FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP 169
++ LIDMY+KC A +F +P
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSL-------------------------------SP 435
Query: 170 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY--NQHTLASVLSACTGLKCLKL 227
+ D V+W +I GY Q+G +AL L EM E+ + N T++ L AC L L++
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 228 GKCVHALVLKN-DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
GK +HA L+N FVS+ ++D Y KCG++ A V+ + K+ +SL+ GY
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
G +A +FD + FKL D + ++
Sbjct: 556 MHGYGEEALGIFDEMRRIG--------------------FKL------------DGVTLL 583
Query: 347 NVLGACAIQATLSLGKQTHAYILRTK----LNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
VL AC+ + G + Y R K ++ + + LVD+ + G +
Sbjct: 584 VVLYACSHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRL--------- 631
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
N A++L +EM ++P + +VA LS CR G VE
Sbjct: 632 ------------------------NAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVE 664
Query: 463 LGE 465
LGE
Sbjct: 665 LGE 667
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/606 (32%), Positives = 319/606 (52%), Gaps = 73/606 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y+K + AR +FD + RD++S+NS+++ Y ++G L +F +M +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV-SNGLAEKGLSVFVQMLVS-- 290
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I +D T+ ++ A R++ G+ +HS VK ++L+DMYSKCG A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND--TVSWNTLIAGYVQN 187
VF E +D VS+ ++IAGY +
Sbjct: 351 KAVFR-----------------------------------EMSDRSVVSYTSMIAGYARE 375
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
G A+ LF EM E+GI + +T+ +VL+ C + L GK VH + +ND + FVS
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ ++D Y KCG+M+ AE V++ + +K + +++I GYS +A LF+ L E
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE---- 491
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
E F PD + VL ACA + G++ H Y
Sbjct: 492 ---------------EKRFS------------PDERTVACVLPACASLSAFDKGREIHGY 524
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
I+R D +A++LVDMY+KCG + A F + + +D++ + VMIAGY HGF
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI--ASKDLVSWTVMIAGYGMHGFGK 582
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+AI LF +M + ++ D I+FV+LL AC H GLV+ G +FF M+ + + P + HYAC+
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VDM R L KA F+ +PI DA+IWGA L C+I+++ L ++ E++ ++E +N
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 607
YV +AN+YA KW ++ R+RK + + K PGCSWI ++ +++F +GD+S+ + +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE 762
Query: 608 AIYSTL 613
I + L
Sbjct: 763 NIEAFL 768
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 223/507 (43%), Gaps = 76/507 (14%)
Query: 35 RDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 94
R + N+ L + C++ L+ ++ +D TL ++L L A + + G
Sbjct: 59 RSVTDANTQLRRF-----CESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDG 113
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 154
K++ +++ + S L MY+ CG +EA VF
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD-------------------- 153
Query: 155 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 214
+ K++ AL WN L+ ++G ++ LF +M+ G+E + +T +
Sbjct: 154 EVKIEKAL-------------FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSC 200
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
V + + L+ + G+ +H +LK+ V + +V FY K + A V+ + +
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+ +S+I GY S G L+E+ V+ +
Sbjct: 261 VISWNSIINGYVSNG-----------LAEKGLSVFVQM---------------------L 288
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
+ D IV+V CA +SLG+ H+ ++ + +++ + L+DMYSKCG++
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 395 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
A+ F+ + SDR V+ Y MIAGYA G +A++LF+EM + + PD T A+L+
Sbjct: 349 SAKAVFREM--SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 455 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR-GNQLEKAVEF--MRKIPIQI 511
C L++ G++ +KE+ ++ +I+ ++DMY + G+ E + F MR I
Sbjct: 407 CARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 512 DASIWGAFLNACKINNNTTLVKQAEEE 538
+I G + C N +L EE
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEE 492
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGC-DTVALDLFAR 63
+ F NA++ Y K ++ +A +F +D++S+N+++ Y + C AL LF
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY--SKNCYANEALSLFNL 488
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
+ + DE T+ +L A L G+++H Y+++ + +SL+DMY+KC
Sbjct: 489 LLEEK-RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G+ A+ +F D+ SK D VSW +IAG
Sbjct: 548 GALLLAHMLFD------DIASK---------------------------DLVSWTVMIAG 574
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
Y +G+ + A+ LF +M + GIE ++ + S+L AC+
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 300/539 (55%), Gaps = 7/539 (1%)
Query: 78 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFREAYNVFSGC 136
L ++L + + GK +H ++ T LS+ LI MY KCG +A VF
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 196
+ +L S N MV+ + G + A VF PE D VSWNT++ GY Q+G + AL
Sbjct: 109 H-LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE-RDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
+ E GI++N+ + A +L+AC + L+L + H VL SN +S I+D Y K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
CG M A+ + + +K ++LI+GY+ G+M A++LF + E+N V WTAL +GY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
V+ LFR+ + P+ + L A A A+L GK+ H Y++RT + +
Sbjct: 287 VRQGSGNRALDLFRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
+ S+L+DMYSK G++ +E+ F+ + D D + +N MI+ A HG +KA+++ +M
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 437 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 496
+K ++P+ T V +L+AC H GLVE G ++F SM + ++P+ HYAC++D+ GR
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 497 LEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 556
++ + + ++P + D IW A L C+I+ N L K+A +EL+K++ ++ + Y+ L+++
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 557 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA--DAIYSTL 613
YA GKW + ++R M+ + K SWI +E + FT D SH+ A + IY L
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFIL 583
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 216/474 (45%), Gaps = 45/474 (9%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN +SWN ++ Y+K+ L +AR +FDS RD+VS+N+M+ YA DG AL +
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFYKE 169
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSK 122
+ R I +E + +L K R + +Q H V A LS LS S+ID Y+K
Sbjct: 170 FR--RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHG-QVLVAGFLSNVVLSCSIIDAYAK 226
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CG A F V D+ +++ + G M+ A +F + PE N VSW LIA
Sbjct: 227 CGQMESAKRCFDEMT-VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN-PVSWTALIA 284
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GYV+ G RAL LF +MI G++ Q T +S L A + L+ GK +H +++ +
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA-TSSLIAGYSSKGNMTKAKRLFDSL 301
N V S ++D Y K G++ +E V+ K +++I+ + G KA R+ D +
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
+FR P+ +V +L AC+ + G
Sbjct: 405 I----------------------------KFRVQ----PNRTTLVVILNACSHSGLVEEG 432
Query: 362 -KQTHAYILRTKLNMDEKLASALVDMYSKCGNIA-YAEKSFQLVTDSDRDVILYNVMIAG 419
+ + ++ + D++ + L+D+ + G K ++ + D+ + +N ++
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI--WNAILGV 490
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
HG E + E++K+ + A ++ L S G EL EK MK+
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSA-PYILLSSIYADHGKWELVEKLRGVMKK 543
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 170/385 (44%), Gaps = 32/385 (8%)
Query: 168 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKL 227
NP + ++ + + +A++ + ++GI LAS+L C K LK
Sbjct: 5 NPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQ 64
Query: 228 GKCVHA-LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
GK +H L + N +S+ ++ Y KCG A V+ + +++ ++ +++++GY
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
G + +A+ +FDS+ ER+ V W + GY + ++EFR + + +
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFA 183
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
+L AC L L +Q H +L + L+ +++D Y+KCG + A++ F +T
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 407 D-----------------------------RDVILYNVMIAGYAHHGFENKAIQLFQEML 437
D ++ + + +IAGY G N+A+ LF++M+
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ +KP+ TF + L A + G++ M NV P + ++DMY + L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSL 362
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNA 522
E + R + D W ++A
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISA 387
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 322/609 (52%), Gaps = 46/609 (7%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLT 79
+L AR +FD + ++N+++ AYA G D V L ++A + ++ ++ T
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYAS--GPDPV-LSIWAFLDMVSESQCYPNKYTFP 135
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
++ +A++ + G+ +H VK+A F +SLI Y CG A VF+
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE- 194
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
D VSWN++I G+VQ G ++AL LF +
Sbjct: 195 --------------------------------KDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M + ++ + T+ VLSAC ++ L+ G+ V + + +N N +++ ++D Y KCG+
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A+ ++ + K ++++ GY+ + A+ + +S+ +++ V W AL S Y ++
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
+ +F E + + + + + +V+ L ACA L LG+ H+YI + + M+ +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
SAL+ MYSKCG++ + + F V RDV +++ MI G A HG N+A+ +F +M +
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
++KP+ +TF + AC H GLV+ E F M+ +Y ++PE HYAC+VD+ GR LEK
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
AV+F+ +PI S+WGA L ACKI+ N L + A LL++E N +V L+N+YA
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 560 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGK 619
GKW + +RK MR K PGCS I ++ IH F SGD +H ++ + YGK
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV-------YGK 633
Query: 620 LYLTFTELK 628
L+ +LK
Sbjct: 634 LHEVMEKLK 642
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 183/354 (51%), Gaps = 13/354 (3%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F N++I Y +L A +F + +D+VS+NSM++ + D AL+LF +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK-ALELFKKM 223
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+S + + +T+ +L+ AK+R + +G+Q+ SY+ + +++ ++++DMY+KCG
Sbjct: 224 ES--EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S +A +F + D V+ M+ + A V P+ D V+WN LI+ Y
Sbjct: 282 SIEDAKRLFDAMEE-KDNVTWTTMLDGYAISEDYEAAREVLNSMPQ-KDIVAWNALISAY 339
Query: 185 VQNGYMERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
QNG AL +F E+ ++K ++ NQ TL S LSAC + L+LG+ +H+ + K+ N
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
V+S ++ Y KCG++ + V+ + + F S++I G + G +A +F + E
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Query: 304 RNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT---MIIVNVLG 350
N V +T + + + LF + + ++P+ IV+VLG
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 9/309 (2%)
Query: 275 PFATSSL--IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
P++ S L +A SS ++ A+++FD + + N W L Y F +
Sbjct: 62 PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM 121
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
+ P+ ++ A A ++LSLG+ H +++ + D +A++L+ Y CG+
Sbjct: 122 VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
+ A K F T ++DV+ +N MI G+ G +KA++LF++M +K +T V +L
Sbjct: 182 LDSACKVF--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 453 SACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 512
SAC +E G + S E+ V + M+DMY + +E A + + D
Sbjct: 240 SACAKIRNLEFGRQ-VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKD 297
Query: 513 ASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 572
W L+ I+ + + A E L + + + L + Y GK NE + E
Sbjct: 298 NVTWTTMLDGYAISED---YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 573 MRGKEATKL 581
++ ++ KL
Sbjct: 355 LQLQKNMKL 363
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 46/343 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M ++ +W ++ Y + + AR + +S +D+V++N+++SAY +G AL +
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE-QNGKPNEALIV 351
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F +Q ++ + +++ITL + L+ A++ + G+ +HSY+ K ++ S+LI MY
Sbjct: 352 FHELQLQKN-MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCG ++ VF+ E D W+ +
Sbjct: 411 SKCGDLEKSREVFNSV---------------------------------EKRDVFVWSAM 437
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G +G A+ +F +M E ++ N T +V AC+ + + + + N G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 241 -CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS---SLIAGYSSKGNMTKAK- 295
+ + IVD + G + A + I P +TS +L+ N+ A+
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI--PPSTSVWGALLGACKIHANLNLAEM 555
Query: 296 ---RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
RL + L RN L + Y K + E V +L + R T
Sbjct: 556 ACTRLLE-LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 322/586 (54%), Gaps = 12/586 (2%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ +SWN ++ + KA L+ AR LF++ +D+V+ NS+L Y +G AL L
Sbjct: 119 MPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI-LNGYAEEALRL 177
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F + D ITLTT+L A+L + GKQ+H+ ++ + SSL+++Y
Sbjct: 178 FKELN-----FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG R A + D S +A+++ G+++ + +F + + WN++
Sbjct: 233 AKCGDLRMASYMLEQIREPDDH-SLSALISGYANCGRVNESRGLFDRKSN-RCVILWNSM 290
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I+GY+ N AL LF EM + E + TLA+V++AC GL L+ GK +H K
Sbjct: 291 ISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGL 349
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+ V+S ++D Y KCG+ A +++ + +S+I Y S G + AKR+F+
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ ++ + W ++ +G+ ++ + F + + L D + + +V+ ACA ++L L
Sbjct: 410 IENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD-LPTDEVSLSSVISACASISSLEL 468
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
G+Q A L+ D+ ++S+L+D+Y KCG + + + F + SD + +N MI+GY
Sbjct: 469 GEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDE--VPWNSMISGY 526
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
A +G +AI LF++M ++P ITF+ +L+AC + GLVE G K F SMK D+ +P+
Sbjct: 527 ATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPD 586
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
H++CMVD+ R +E+A+ + ++P +D S+W + L C N + K+A E+++
Sbjct: 587 KEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKII 646
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
++E +N YVQL+ ++A G W +RK MR TK PG SW
Sbjct: 647 ELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 157/342 (45%), Gaps = 60/342 (17%)
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSN-QFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
+L +C+ L + + L+LK S+ V++ ++ Y + G M A +++ + +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF---- 329
+ F+ +++I GY + G + R FD + ER+ W + SG+ K+ + +LF
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 330 -REFRTTEALI----------------------PDTMIIVNVLGACAIQATLSLGKQTHA 366
++ T +L+ D + + VL ACA L GKQ HA
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD------------------- 407
IL + D K+ S+LV++Y+KCG++ A + + + D
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 408 ----------RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
R VIL+N MI+GY + + +A+ LF EM + + D+ T A+++AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIG 330
Query: 458 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR-GNQLE 498
G +E G++ + + ++ +I + ++DMY + G+ +E
Sbjct: 331 LGFLETGKQMHCHACK-FGLIDDIVVASTLLDMYSKCGSPME 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
V +L +C+ + +L +QT+ +L+ L+ +A+ L+ MYS+ G + A F +
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 405 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 464
D R+ +N MI GY + G + +++ F M + D ++ ++S G + +
Sbjct: 90 D--RNYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVA 143
Query: 465 EKFFMSMKE-DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNAC 523
+ F +M E D L + H +++ Y E+A+ +++ DA L AC
Sbjct: 144 RRLFNAMPEKDVVTLNSLLH-GYILNGYA-----EEALRLFKELNFSADAITLTTVLKAC 197
Query: 524 KINNNTTLVKQAEEELL--KVEADNGSRYVQLANVYAAEG 561
KQ ++L VE D+ L NVYA G
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMN-SSLVNVYAKCG 236
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/605 (30%), Positives = 329/605 (54%), Gaps = 14/605 (2%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
+I +Y + A + S + S++S++ A A T ++ +F+RM S +
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK-LFTQSIGVFSRMFS--HGL 112
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D L + + A+L GKQ+H + D+ F S+ MY +CG +A
Sbjct: 113 IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARK 172
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 188
VF D+V+ +A++ A R G ++ + + + + VSWN +++G+ ++G
Sbjct: 173 VFDRMSDK-DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
Y + A+ +F ++ G +Q T++SVL + + L +G+ +H V+K ++ V S
Sbjct: 232 YHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS 291
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER---- 304
++D Y K G++ S++ + ++ I G S G + KA +F+ E+
Sbjct: 292 AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N V WT++ +G ++ + +LFRE + + P+ + I ++L AC A L G+ T
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H + +R L + + SAL+DMY+KCG I ++ F ++ ++++ +N ++ G++ HG
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSLMNGFSMHG 468
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
+ + +F+ +++ LKPD I+F +LLSAC GL + G K+F M E+Y + P + HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
+CMV++ GR +L++A + ++++P + D+ +WGA LN+C++ NN L + A E+L +E
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
+N YV L+N+YAA+G W E+ IR +M K PGCSWI V+N ++ +GD SH
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 605 KADAI 609
+ D I
Sbjct: 649 QIDQI 653
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 219/492 (44%), Gaps = 66/492 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+AF ++ Y++ + AR +FD S +D+V+ +++L AYA GC + + + M
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA-RKGCLEEVVRILSEM 208
Query: 65 QSA----------------------RDTIGM-----------DEITLTTMLNLSAKLRVV 91
+S+ ++ + M D++T++++L ++
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 92 CYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAA 151
G+ +H Y++K K +S++IDMY K G ++F+ + +++ NA +
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE-MMEAGVCNAYITG 327
Query: 152 CCRDGKMDMALNVF----WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 207
R+G +D AL +F + E N VSW ++IAG QNG AL LF EM G++
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELN-VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 208 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 267
N T+ S+L AC + L G+ H ++ N V S ++D Y KCG + ++ V+
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 268 AGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTAL---CSGYVKSQ 320
+ K+ +SL+ G+S G + +F+SL + +++ +T+L C +
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY--ILRTKLNMDEK 378
+ FK+ E + + +VN+LG GK AY I D
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA--------GKLQEAYDLIKEMPFEPDSC 558
Query: 379 LASALVDMYSKCGNIAY----AEKSFQLVTDSDRD-VILYNVMIAGYAHHGFENKAIQLF 433
+ AL++ N+ AEK F L ++ V+L N+ YA G + +
Sbjct: 559 VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI----YAAKGMWTEVDSIR 614
Query: 434 QEMLKISLKPDA 445
+M + LK +
Sbjct: 615 NKMESLGLKKNP 626
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 315/607 (51%), Gaps = 70/607 (11%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F+ + Y K + +AR +FD RDLVS+N++++ Y+ +G +AL++ M
Sbjct: 171 FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS-QNGMARMALEMVKSM-- 227
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ + IT+ ++L + LR++ GK++H Y +++ D ++L+DMY+KCGS
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
A +F G ++ +N VSWN++I YVQ
Sbjct: 288 ETARQLFDG------MLERN---------------------------VVSWNSMIDAYVQ 314
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
N + A+ +F +M+++G++ ++ L AC L L+ G+ +H L ++ N V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
+ ++ YCKC + A S +F L R
Sbjct: 375 VNSLISMYCKCKEVDTAAS-------------------------------MFGKLQSRTL 403
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V W A+ G+ ++ + F + R+ + PDT V+V+ A A + K H
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
++R+ L+ + + +ALVDMY+KCG I A F ++ S+R V +N MI GY HGF
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM--SERHVTTWNAMIDGYGTHGFG 520
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
A++LF+EM K ++KP+ +TF++++SAC H GLVE G K F MKE+Y++ + HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
MVD+ GR +L +A +F+ ++P++ +++GA L AC+I+ N ++A E L ++ D+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 606
G +V LAN+Y A W ++G++R M + K PGCS + ++N +H F SG T+H +
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 607 DAIYSTL 613
IY+ L
Sbjct: 701 KKIYAFL 707
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 187/413 (45%), Gaps = 56/413 (13%)
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAM----------VAACCRDGKMDMALNVFWK- 167
+ +C S +E + LV KN + V+ CR G +D A VF
Sbjct: 43 LLERCSSLKELRQILP-------LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 95
Query: 168 NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKL 227
+ + N V ++T++ G+ + +++AL F+ M +E + +L C L++
Sbjct: 96 DSKLN--VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 228 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
GK +H L++K+ + F +G+ + Y KC + A V+ + + + ++++AGYS
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 288 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
G A + S+ E N L P + IV+
Sbjct: 214 NGMARMALEMVKSMCEEN--------------------------------LKPSFITIVS 241
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD 407
VL A + +S+GK+ H Y +R+ + +++ALVDMY+KCG++ A + F + +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML--E 299
Query: 408 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 467
R+V+ +N MI Y + +A+ +FQ+ML +KP ++ + L AC G +E G +F
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RF 358
Query: 468 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+ + + + ++ MY + +++ A K+ + S W A +
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS-WNAMI 410
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 43/243 (17%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN N++I Y K + A ++F R LVS+N+M+ +A +G AL+ F++
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA-QNGRPIDALNYFSQ 428
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+S T+ D T +++ A+L + + K +H ++++ D + F ++L+DMY+KC
Sbjct: 429 MRSR--TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G+ A +F D++S+ +WN +I G
Sbjct: 487 GAIMIARLIF-------DMMSE--------------------------RHVTTWNAMIDG 513
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHALVL 236
Y +G+ + AL LF EM + I+ N T SV+SAC+ GLKC + K +++ L
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 237 KND 239
D
Sbjct: 574 SMD 576
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+N F A++ Y K + AR +FD S R + ++N+M+ Y G G AL+LF
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY-GTHGFGKAALELFEE 529
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYS 121
MQ + TI + +T ++++ + +V G + YM+K + +LS +++D+
Sbjct: 530 MQ--KGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLG 586
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN-DTVSWNTL 180
+ G EA++ + AM+ AC ++ A + E N D ++ L
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 181 IAGYVQNGYM-ERALTLFIEMIEKGIE 206
+A + M E+ + + M+ +G+
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLR 673
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 320/614 (52%), Gaps = 78/614 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I Y+K N+ +AR LFD + +V++NSM+S YA A+G D AL +F M+ +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMR--LN 289
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ + E + +++ L A L+ + + +Q+H +VK + ++L+ YSKC + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 130 YNVFS--GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
+F GC G + VSW +I+G++QN
Sbjct: 350 LRLFKEIGCVG----------------------------------NVVSWTAMISGFLQN 375
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
E A+ LF EM KG+ N+ T + +L+A + + VHA V+K + + V
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVG 431
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ ++D Y K G + A V++GI K A S+++AGY+ G
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG------------------ 473
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC-AIQATLSLGKQTHA 366
+ EA K+F E T + P+ ++L C A A++ GKQ H
Sbjct: 474 -------------ETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+ ++++L+ ++SAL+ MY+K GNI AE+ F+ ++D++ +N MI+GYA HG
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQA 577
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
KA+ +F+EM K +K D +TF+ + +AC H GLVE GEK+F M D + P H +C
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
MVD+Y R QLEKA++ + +P ++IW L AC+++ T L + A E+++ ++ ++
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 606
+ YV L+N+YA G W E ++RK M + K PG SWI V+N + F +GD SH
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 757
Query: 607 DAIYSTLVCLYGKL 620
D IY L L +L
Sbjct: 758 DQIYMKLEDLSTRL 771
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 218/507 (42%), Gaps = 108/507 (21%)
Query: 17 IKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEI 76
+ + L A LFD + RD SY S+L ++ DG A LF + R + MD
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFS-RDGRTQEAKRLFLNIH--RLGMEMDCS 94
Query: 77 TLTTMLNLSAKLRVVCYGKQMHSYMVKTA--NDLSKFALSSLIDMYSKCGSFREAYNVFS 134
+++L +SA L +G+Q+H +K +D+S +SL+D Y K +F++ VF
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFD 152
Query: 135 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 194
++ +N V+W TLI+GY +N + L
Sbjct: 153 ------EMKERN---------------------------VVTWTTLISGYARNSMNDEVL 179
Query: 195 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 254
TLF+ M +G + N T A+ L G VH +V+KN VS+ +++ Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 255 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS-------LSERNYV 307
KCGN+R A ++ +KS +S+I+GY++ G +A +F S LSE ++
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 308 VWTALCS------------------GYVKSQ-----------QCEAV---FKLFREFRTT 335
LC+ G++ Q +C A+ +LF+E
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 336 EALIPDTMIIVNVL------------------GACAIQATLSL---------GKQTHAYI 368
++ T +I L G + T S+ + HA +
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++T + +AL+D Y K G + A K F + D+D++ ++ M+AGYA G
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI--DDKDIVAWSAMLAGYAQTGETEA 477
Query: 429 AIQLFQEMLKISLKPDAITFVALLSAC 455
AI++F E+ K +KP+ TF ++L+ C
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 38/266 (14%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
R++ A++ AY+K + +A +F +D+V++++ML+ YA G A+ +F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT-GETEAAIKMFG 483
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRV-VCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
+ + I +E T +++LN+ A + GKQ H + +K+ D S S+L+ MY+
Sbjct: 484 EL--TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 541
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
K G+ A VF DLVS N+M+
Sbjct: 542 KKGNIESAEEVFKR-QREKDLVSWNSMI-------------------------------- 568
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN-DG 240
+GY Q+G +AL +F EM ++ ++ + T V +ACT ++ G+ +++++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESV 266
+ +S +VD Y + G + A V
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKV 654
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 303/603 (50%), Gaps = 72/603 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT-VALDLFAR 63
N FS+N I+ AY K + AR LFD D VSYN+++S YA D +T A+ LF R
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA--DARETFAAMVLFKR 130
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+ + +D TL+ ++ +A V KQ+H + V D ++ + YSK
Sbjct: 131 MR--KLGFEVDGFTLSGLI--AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G REA ++VF+ E D VSWN++I
Sbjct: 187 GLLREA--------------------------------VSVFYGMDELRDEVSWNSMIVA 214
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Y Q+ +AL L+ EMI KG + + TLASVL+A T L L G+ H ++K N
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
V SG++DFY KCG M ++++F +
Sbjct: 275 SHVGSGLIDFYSKCGGC----------------------------DGMYDSEKVFQEILS 306
Query: 304 RNYVVWTALCSGYVKSQQ-CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+ VVW + SGY +++ E K FR+ + PD V V AC+ ++ S K
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 363 QTHAYILRTKLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
Q H +++ + + + +AL+ +Y K GN+ A F + + + + +N MI GYA
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE--LNAVSFNCMIKGYA 423
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
HG +A+ L+Q ML + P+ ITFVA+LSAC H G V+ G+++F +MKE + + PE
Sbjct: 424 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 483
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
HY+CM+D+ GR +LE+A F+ +P + + W A L AC+ + N L ++A EL+
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 543
Query: 542 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT 601
++ + YV LAN+YA KW EM +RK MRGK K PGCSWI V+ HVF + D
Sbjct: 544 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDW 603
Query: 602 SHS 604
SH
Sbjct: 604 SHP 606
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
T +L + L GK +HAL +K+ S+ ++S+ V+ Y KCG + YA + +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 271 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 330
+ F+ + ++ Y+ + A++LFD + + + V + L SGY +++ A LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 331 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
R + D + ++ AC + + L KQ H + + + + +A V YSK
Sbjct: 130 RMRKLGFEV-DGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G + A F + D RD + +N MI Y H KA+ L++EM+ K D T +
Sbjct: 187 GLLREAVSVFYGM-DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 451 LLSA 454
+L+A
Sbjct: 246 VLNA 249
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 313/595 (52%), Gaps = 42/595 (7%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
+++ A LF D+V +N+M+ ++ D CD + L+ M ++ + D T
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVD-CDGEGVRLYLNM--LKEGVTPDSHTFPF 139
Query: 81 MLN-LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
+LN L + GK++H ++VK + + ++L+ MYS CG
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-------------- 185
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
MDMA VF + + D SWN +I+GY + E ++ L +E
Sbjct: 186 ------------------MDMARGVFDRRCK-EDVFSWNLMISGYNRMKEYEESIELLVE 226
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M + TL VLSAC+ +K L K VH V + + + + +V+ Y CG
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
M A ++ + + + +S++ GY +GN+ A+ FD + R+ + WT + GY+++
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
++FRE ++ +IPD +V+VL ACA +L +G+ YI + K+ D +
Sbjct: 347 GCFNESLEIFREMQSA-GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVV 405
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+AL+DMY KCG A+K F D D RD + M+ G A++G +AI++F +M
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFH---DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 439 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 498
+S++PD IT++ +LSAC H G+V+ KFF M+ D+ + P + HY CMVDM GR ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 499 KAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 558
+A E +RK+P+ ++ +WGA L A +++N+ + + A +++L++E DNG+ Y L N+YA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 559 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+W ++ +R+++ K PG S I V H F +GD SH +++ IY L
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 218/514 (42%), Gaps = 83/514 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N + NA++ Y + AR +FD D+ S+N M+S Y + +++L M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE-SIELLVEM 227
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ R+ + +TL +L+ +K++ K++H Y+ + + S ++L++ Y+ CG
Sbjct: 228 E--RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A +F D++S ++V G + +A F + P D +SW +I GY
Sbjct: 286 EMDIAVRIFRSMKA-RDVISWTSIVKGYVERGNLKLARTYFDQMP-VRDRISWTIMIDGY 343
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++ G +L +F EM G+ ++ T+ SVL+AC L L++G+ + + KN ++
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
V + ++D Y KCG A+ V+ + + F ++++ G ++ G +A ++F + +
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
++ PD + + VL AC + ++
Sbjct: 464 --------------------------------SIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
A K+ D ++ +LV Y M+ G
Sbjct: 492 FA-----KMRSDHRIEPSLVH---------------------------YGCMVDMLGRAG 519
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACR---HRGLVELGEKFFMSMKEDYNVLPEI 481
+A ++ ++M + P++I + ALL A R + EL K + ++ D +
Sbjct: 520 LVKEAYEILRKM---PMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV--- 573
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASI 515
YA + ++Y + + E RKI +D +I
Sbjct: 574 --YALLCNIYAGCKRWKDLREVRRKI---VDVAI 602
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 139/344 (40%), Gaps = 57/344 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ SW +I+ Y++ NL AR FD RD +S+ M+ Y A GC +L++
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA-GCFNESLEI 355
Query: 61 FARMQSARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
F MQSA GM DE T+ ++L A L + G+ + +Y+ K ++LID
Sbjct: 356 FREMQSA----GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
MY KCG +A VF D D +W
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQ---------------------------------RDKFTWT 438
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
++ G NG + A+ +F +M + I+ + T VLSAC + + A + +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 239 DGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG--------YSSKG 289
V G +VD + G ++ A + K P +S++ G ++ +
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILR----KMPMNPNSIVWGALLGASRLHNDEP 554
Query: 290 NMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
A + L N V+ LC+ Y ++ +K RE R
Sbjct: 555 MAELAAKKILELEPDNGAVYALLCNIYAGCKR----WKDLREVR 594
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 18/319 (5%)
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSK--GNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+++S+ G+ +P L + S+ G+++ A +LF + E + VVW + G+ K
Sbjct: 54 HSQSITRGVA-PNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTKLNMDEK 378
+L+ E + PD+ +L G L+ GK+ H ++++ L +
Sbjct: 113 DCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLY 171
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+ +ALV MYS CG + A F DV +N+MI+GY ++I+L EM +
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFD--RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 439 ISLKPDAITFVALLSAC---RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 495
+ P ++T + +LSAC + + L + ++ K + P + +V+ Y
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE----PSLRLENALVNAYAACG 285
Query: 496 QLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 555
+++ AV R + + D W + + N L + +++ + + + +
Sbjct: 286 EMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQM---PVRDRISWTIMID 341
Query: 556 VYAAEGKWNEMGRIRKEMR 574
Y G +NE I +EM+
Sbjct: 342 GYLRAGCFNESLEIFREMQ 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 42/306 (13%)
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
++FK TE++ D +++LG C T KQ H+ + + + L
Sbjct: 16 SIFKALLMSTITESISNDYSRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKL 72
Query: 384 VDMYSK--CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
+ G+++YA K F V + DV+++N MI G++ + + ++L+ MLK +
Sbjct: 73 FVFWCSRLGGHVSYAYKLF--VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV 130
Query: 442 KPDAITFVALLSAC-RHRGLVELGEKF---------------------------FMSMKE 473
PD+ TF LL+ R G + G+K M M
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMAR 190
Query: 474 ---DYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNACKINN 527
D +++ + M+ Y R + E+++E M + + + L+AC
Sbjct: 191 GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK 250
Query: 528 NTTLVKQAEEELLKVEADNGSRYVQ-LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
+ L K+ E + + + + R L N YAA G+ + RI + M+ ++
Sbjct: 251 DKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 587 IYVENG 592
YVE G
Sbjct: 311 GYVERG 316
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 318/611 (52%), Gaps = 39/611 (6%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ F N+++ Y + L AR +FD S R++VS+ SM+ YA D A+DLF R
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD-AVDLFFR 225
Query: 64 MQSARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
M RD + + +T+ +++ AKL + G+++++++ + +++ +S+L+DMY K
Sbjct: 226 M--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
C + A +F G +L NAM +
Sbjct: 284 CNAIDVAKRLFDEY-GASNLDLCNAMAS-------------------------------- 310
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
YV+ G AL +F M++ G+ ++ ++ S +S+C+ L+ + GK H VL+N S
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ + ++D Y KC A ++ + K+ +S++AGY G + A F+++
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E+N V W + SG V+ E ++F ++ E + D + ++++ AC L L K
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
+ YI + + +D +L + LVDM+S+CG+ A F +T+ RDV + I A
Sbjct: 491 WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN--RDVSAWTAAIGAMAM 548
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
G +AI+LF +M++ LKPD + FV L+AC H GLV+ G++ F SM + + V PE
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
HY CMVD+ GR LE+AV+ + +P++ + IW + L AC++ N + A E++ +
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
+ YV L+NVYA+ G+WN+M ++R M+ K K PG S I + H FTSGD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 603 HSKADAIYSTL 613
H + I + L
Sbjct: 729 HPEMPNIEAML 739
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 38/324 (11%)
Query: 135 GCDGVVDLVSKNAMVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
G D V ++K +VA C G + A VF + + +N+LI GY +G
Sbjct: 59 GLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN 116
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
A+ LF+ M+ GI +++T LSAC + G +H L++K + FV + +V
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
FY +CG + A V FD +SERN V WT+
Sbjct: 177 HFYAECGELDSARKV-------------------------------FDEMSERNVVSWTS 205
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ GY + + LF E + P+++ +V V+ ACA L G++ +A+I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
+ +++ + SALVDMY KC I A++ F S+ D L N M + Y G +A+
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALG 323
Query: 432 LFQEMLKISLKPDAITFVALLSAC 455
+F M+ ++PD I+ ++ +S+C
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC 347
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 231/535 (43%), Gaps = 114/535 (21%)
Query: 20 HNLTQARALFD-SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 78
+L+ A+ +F+ S S+ YNS++ YA + C+ L LF RM ++ I D+ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNS--GISPDKYTF 137
Query: 79 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 138
L+ AK R G Q+H +VK F +SL+ Y++C
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC--------------- 182
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 198
G++D A VF + E N VSW ++I GY + + + A+ LF
Sbjct: 183 -----------------GELDSARKVFDEMSERN-VVSWTSMICGYARRDFAKDAVDLFF 224
Query: 199 EMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCK 256
M+ ++ + N T+ V+SAC L+ L+ G+ V+A + +N G N + S +VD Y K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMK 283
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
C + AKRLFD N + A+ S Y
Sbjct: 284 CNAIDV-------------------------------AKRLFDEYGASNLDLCNAMASNY 312
Query: 317 VK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
V+ +++ VF L + + PD + +++ + +C+ + GK H Y+LR
Sbjct: 313 VRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ-- 431
+ + +AL+DMY KC A + F + S++ V+ +N ++AGY +G + A +
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 432 ----------------------LFQEMLKI--------SLKPDAITFVALLSACRHRGLV 461
LF+E +++ + D +T +++ SAC H G +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 462 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIW 516
+L + + ++++ + ++ +VDM+ R E A+ + + D S W
Sbjct: 487 DLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 37/296 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M ++ +WN+I+ Y++ + A F++ +++VS+N+++S + A+++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE-AIEV 456
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQS ++ + D +T+ ++ + L + K ++ Y+ K L ++L+DM+
Sbjct: 457 FCSMQS-QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
S+CG A ++F+ D +W
Sbjct: 516 SRCGDPESAMSIFNSLTN---------------------------------RDVSAWTAA 542
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G ERA+ LF +MIE+G++ + L+AC+ ++ GK + +LK G
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIK-SPFATSSLIAGYSSKGNMTKA 294
S + V G +VD + G + A + + ++ + +SL+A +GN+ A
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 318/611 (52%), Gaps = 39/611 (6%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ F N+++ Y + L AR +FD S R++VS+ SM+ YA D A+DLF R
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD-AVDLFFR 225
Query: 64 MQSARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
M RD + + +T+ +++ AKL + G+++++++ + +++ +S+L+DMY K
Sbjct: 226 M--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
C + A +F G +L NAM +
Sbjct: 284 CNAIDVAKRLFDEY-GASNLDLCNAMAS-------------------------------- 310
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
YV+ G AL +F M++ G+ ++ ++ S +S+C+ L+ + GK H VL+N S
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ + ++D Y KC A ++ + K+ +S++AGY G + A F+++
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E+N V W + SG V+ E ++F ++ E + D + ++++ AC L L K
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
+ YI + + +D +L + LVDM+S+CG+ A F +T+ RDV + I A
Sbjct: 491 WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN--RDVSAWTAAIGAMAM 548
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
G +AI+LF +M++ LKPD + FV L+AC H GLV+ G++ F SM + + V PE
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
HY CMVD+ GR LE+AV+ + +P++ + IW + L AC++ N + A E++ +
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
+ YV L+NVYA+ G+WN+M ++R M+ K K PG S I + H FTSGD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 603 HSKADAIYSTL 613
H + I + L
Sbjct: 729 HPEMPNIEAML 739
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 38/324 (11%)
Query: 135 GCDGVVDLVSKNAMVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
G D V ++K +VA C G + A VF + + +N+LI GY +G
Sbjct: 59 GLDNDVSTITK--LVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN 116
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
A+ LF+ M+ GI +++T LSAC + G +H L++K + FV + +V
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
FY +CG + A V FD +SERN V WT+
Sbjct: 177 HFYAECGELDSARKV-------------------------------FDEMSERNVVSWTS 205
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ GY + + LF E + P+++ +V V+ ACA L G++ +A+I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
+ +++ + SALVDMY KC I A++ F S+ D L N M + Y G +A+
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALG 323
Query: 432 LFQEMLKISLKPDAITFVALLSAC 455
+F M+ ++PD I+ ++ +S+C
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC 347
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 231/535 (43%), Gaps = 114/535 (21%)
Query: 20 HNLTQARALFD-SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 78
+L+ A+ +F+ S S+ YNS++ YA + C+ L LF RM ++ I D+ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMMNS--GISPDKYTF 137
Query: 79 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 138
L+ AK R G Q+H +VK F +SL+ Y++C
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC--------------- 182
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 198
G++D A VF + E N VSW ++I GY + + + A+ LF
Sbjct: 183 -----------------GELDSARKVFDEMSERN-VVSWTSMICGYARRDFAKDAVDLFF 224
Query: 199 EMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCK 256
M+ ++ + N T+ V+SAC L+ L+ G+ V+A + +N G N + S +VD Y K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVNDLMVSALVDMYMK 283
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
C + AKRLFD N + A+ S Y
Sbjct: 284 CNAIDV-------------------------------AKRLFDEYGASNLDLCNAMASNY 312
Query: 317 VK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
V+ +++ VF L + + PD + +++ + +C+ + GK H Y+LR
Sbjct: 313 VRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ-- 431
+ + +AL+DMY KC A + F + S++ V+ +N ++AGY +G + A +
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRM--SNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 432 ----------------------LFQEMLKI--------SLKPDAITFVALLSACRHRGLV 461
LF+E +++ + D +T +++ SAC H G +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 462 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIW 516
+L + + ++++ + ++ +VDM+ R E A+ + + D S W
Sbjct: 487 DLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 135/296 (45%), Gaps = 37/296 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M ++ +WN+I+ Y++ + A F++ +++VS+N+++S + A+++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE-AIEV 456
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQS ++ + D +T+ ++ + L + K ++ Y+ K L ++L+DM+
Sbjct: 457 FCSMQS-QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
S+CG A ++F+ L ++ D +W
Sbjct: 516 SRCGDPESAMSIFNS------LTNR---------------------------DVSAWTAA 542
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G ERA+ LF +MIE+G++ + L+AC+ ++ GK + +LK G
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIK-SPFATSSLIAGYSSKGNMTKA 294
S + V G +VD + G + A + + ++ + +SL+A +GN+ A
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 310/615 (50%), Gaps = 70/615 (11%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+N F NA++ Y K L AR +F+ RD V++N+++ +Y D ++ A DLF R
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV-QDENESEAFDLFKR 519
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M I D L + L + + GKQ+H VK D SSLIDMYSKC
Sbjct: 520 MNLC--GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G ++A VFS PE++ VS N LIAG
Sbjct: 578 GIIKDARKVFSSL--------------------------------PEWS-VVSMNALIAG 604
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Y QN +E A+ LF EM+ +G+ ++ T A+++ AC + L LG H + K S
Sbjct: 605 YSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS- 662
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS- 302
E Y GI SL+ Y + MT+A LF LS
Sbjct: 663 --------------------EGEYLGI---------SLLGMYMNSRGMTEACALFSELSS 693
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
++ V+WT + SG+ ++ E K ++E R + ++PD V VL C++ ++L G+
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
H+ I ++DE ++ L+DMY+KCG++ + + F + +V+ +N +I GYA
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS-NVVSWNSLINGYAK 811
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
+G+ A+++F M + + PD ITF+ +L+AC H G V G K F M Y + +
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
H ACMVD+ GR L++A +F+ ++ DA +W + L AC+I+ + + + E+L+++
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
E N S YV L+N+YA++G W + +RK MR + K+PG SWI VE H+F +GD S
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 603 HSKADAIYSTLVCLY 617
HS+ I L LY
Sbjct: 992 HSEIGKIEMFLEDLY 1006
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 213/471 (45%), Gaps = 82/471 (17%)
Query: 3 HR-NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
HR + ++ +I YI+ L AR LF S D+V++N M+S + G GC+TVA++ F
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH-GKRGCETVAIEYF 315
Query: 62 ARM-----QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
M +S R T+G ++ + + + A L + G +H+ +K + + SSL
Sbjct: 316 FNMRKSSVKSTRSTLG----SVLSAIGIVANLDL---GLVVHAEAIKLGLASNIYVGSSL 368
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
+ MYSKC KM+ A VF E ND V
Sbjct: 369 VSMYSKCE--------------------------------KMEAAAKVFEALEEKND-VF 395
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN +I GY NG + + LF++M G + T S+LS C L++G H++++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K N FV + +VD Y KCG + A++
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALE-------------------------------DARQ 484
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+F+ + +R+ V W + YV+ + F LF+ ++ D + + L AC
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC-GIVSDGACLASTLKACTHVH 543
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
L GKQ H ++ L+ D S+L+DMYSKCG I A K F + + V+ N +
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNAL 601
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 467
IAGY+ + E +A+ LFQEML + P ITF ++ AC + LG +F
Sbjct: 602 IAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 232/537 (43%), Gaps = 82/537 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NAI+ Y K ++ A FD +D+ ++NSMLS Y+ V + + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE---N 154
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I ++ T + +L+ A+ V +G+Q+H M+K + + + +L+DMY+KC +A
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 130 YNVFSGCDGVVD-----------------LVSKNAMVAACCRD----------------- 155
VF + +VD L + +V RD
Sbjct: 215 RRVF---EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTY 271
Query: 156 ---GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 212
GK+ A +F + D V+WN +I+G+ + G A+ F M + ++ + TL
Sbjct: 272 IRLGKLKDARLLFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 213 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 272
SVLSA + L LG VHA +K SN +V S +V Y KC M A V+ +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
K+ +++I GY+ G K LF + Y +
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI------------------------ 426
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
D ++L CA L +G Q H+ I++ KL + + +ALVDMY+KCG
Sbjct: 427 --------DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
+ A + F+ + DRD + +N +I Y E++A LF+ M + D + L
Sbjct: 479 LEDARQIFERMC--DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 453 SACRH-RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
AC H GL + + +S+K + +++ + ++DMY + ++ A + +P
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLD--RDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 191/460 (41%), Gaps = 78/460 (16%)
Query: 84 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 143
L+ LR+ GK +HS + D ++++D+Y+KC A F D +
Sbjct: 72 LALALRI---GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-------DFL 121
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 203
K D +WN++++ Y G + L F+ + E
Sbjct: 122 EK---------------------------DVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 204 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
I N+ T + VLS C ++ G+ +H ++K N + +VD Y KC + A
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSK----------------------------------- 288
V+ I + + L +GY
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274
Query: 289 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV-FKLFREFRTTEALIPDTMIIVN 347
G + A+ LF +S + V W + SG+ K + CE V + F R + ++ + +
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGK-RGCETVAIEYFFNMRKS-SVKSTRSTLGS 332
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD 407
VL A I A L LG HA ++ L + + S+LV MYSKC + A K F+ + +
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL--EE 390
Query: 408 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 467
++ + +N MI GYAH+G +K ++LF +M D TF +LLS C +E+G +F
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 468 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
S+ + ++ +VDMY + LE A + ++
Sbjct: 451 H-SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 308/613 (50%), Gaps = 72/613 (11%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
H + + +++ Y K + +A +F + L +N+M++AYA D ALDLF
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND-YGYSALDLFG 362
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
M+ + ++ D TL+ +++ + L + YGK +H+ + K + S+L+ +YSK
Sbjct: 363 FMR--QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CG +AY VF K+ E D V+W +LI+
Sbjct: 421 CGCDPDAYLVF---------------------------------KSMEEKDMVAWGSLIS 447
Query: 183 GYVQNGYMERALTLFIEMIEK--GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
G +NG + AL +F +M + ++ + + SV +AC GL+ L+ G VH ++K
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
N FV S ++D Y KC G A ++F S
Sbjct: 508 VLNVFVGSSLIDLYSKC-------------------------------GLPEMALKVFTS 536
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+S N V W ++ S Y ++ E LF ++ + PD++ I +VL A + A+L
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFN-LMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
GK H Y LR + D L +AL+DMY KCG YAE F+ + + +I +N+MI GY
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGY 653
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
HG A+ LF EM K PD +TF++L+SAC H G VE G+ F MK+DY + P
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
+ HYA MVD+ GR LE+A F++ +PI+ D+SIW L+A + ++N L + E+LL
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
++E + GS YVQL N+Y G NE ++ M+ K K PGCSWI V + +VF SG
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833
Query: 601 TSHSKADAIYSTL 613
+S I++ L
Sbjct: 834 SSSPMKAEIFNVL 846
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 229/545 (42%), Gaps = 104/545 (19%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASH-------RDLVSYNSMLSAYAGADGCDTVA 57
+ F +++ Y+K L A +FD S RD+ +NSM+ Y
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF--------- 144
Query: 58 LDLFARMQSARDTIGMDEITLT-----TMLNLSAKLRVVCY--------GKQMHSYMVKT 104
+ + ++ +G L +LS + V+C GKQ+H +M++
Sbjct: 145 -----KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 105 ANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 164
+ D F ++LIDMY K G +A+ VF V++ K
Sbjct: 200 SLDTDSFLKTALIDMYFKFGLSIDAWRVF------VEIEDK------------------- 234
Query: 165 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC 224
++ V WN +I G+ +G E +L L++ ++ + L AC+ +
Sbjct: 235 -------SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 225 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
G+ +H V+K ++ +V + ++ Y KCG + AE+V
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV------------------ 329
Query: 285 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 344
F + ++ +W A+ + Y ++ + LF F ++++PD+
Sbjct: 330 -------------FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG-FMRQKSVLPDSFT 375
Query: 345 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
+ NV+ C++ + GK HA + + + + SAL+ +YSKCG A F+ +
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK--S 433
Query: 405 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEML--KISLKPDAITFVALLSACRHRGLVE 462
++D++ + +I+G +G +A+++F +M SLKPD+ ++ +AC +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
G + SM + VL ++ + ++D+Y + E A++ + + + W + ++
Sbjct: 494 FGLQVHGSMIKTGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISC 551
Query: 523 CKINN 527
NN
Sbjct: 552 YSRNN 556
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 119/292 (40%), Gaps = 43/292 (14%)
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ-HTLASVLSACTGLKCLKLGKCVHAL 234
S N+ I +Q G +AL L+ + + T S+L AC+ L L GK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
V+ RY PF +SL+ Y G + A
Sbjct: 86 VV--------------------VLGWRY-----------DPFIATSLVNMYVKCGFLDYA 114
Query: 295 KRLFDSLSE-------RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
++FD S+ R+ VW ++ GY K ++ + FR + PD +
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF-GVRPDAFSLSI 173
Query: 348 VLGACAIQATLSL--GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
V+ + GKQ H ++LR L+ D L +AL+DMY K G A + F + D
Sbjct: 174 VVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIED 233
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
+V+L+NVMI G+ G ++ L+ S+K + +F L AC
Sbjct: 234 KS-NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ 284
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
++L AC+ LS GK H ++ D +A++LV+MY KCG + YA + F + S
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 407 D-----RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
RDV ++N MI GY + + F+ ML ++PDA + ++S G
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 306/614 (49%), Gaps = 71/614 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y K A LF S D V++N M+S Y + G +L F M S+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS-GLMEESLTFFYEMISS-- 334
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D IT +++L +K + Y KQ+H Y+++ + L F S+LID Y KC A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
N+FS C+ V D V + +I+GY+ NG
Sbjct: 395 QNIFSQCNSV---------------------------------DVVVFTAMISGYLHNGL 421
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+L +F +++ I N+ TL S+L L LKLG+ +H ++K + +
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++D Y KCG M A + F+ LS+R+ V W
Sbjct: 482 VIDMYAKCGRMNLAYEI-------------------------------FERLSKRDIVSW 510
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
++ + +S A +FR+ + + D + I L ACA + S GK H +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVS-GICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ L D S L+DMY+KCGN+ A F+ T +++++ +N +IA +HG +
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFK--TMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 430 IQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
+ LF EM++ S ++PD ITF+ ++S+C H G V+ G +FF SM EDY + P+ HYAC+V
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
D++GR +L +A E ++ +P DA +WG L AC+++ N L + A +L+ ++ N
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSG 747
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
YV ++N +A +W + ++R M+ +E K+PG SWI + H+F SGD +H ++
Sbjct: 748 YYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSH 807
Query: 609 IYSTLVCLYGKLYL 622
IYS L L G+L L
Sbjct: 808 IYSLLNSLLGELRL 821
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 241/519 (46%), Gaps = 72/519 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F +++I AY++ + LFD +D V +N ML+ YA D+V + F+ M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV-IKGFSVM 230
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D I + +T +L++ A ++ G Q+H +V + D +SL+ MYSKCG
Sbjct: 231 R--MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
F +A +F M A V W N +I+GY
Sbjct: 289 RFDDASKLFR----------------------MMSRADTVTW-----------NCMISGY 315
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
VQ+G ME +LT F EMI G+ + T +S+L + + + L+ K +H ++++ +
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
F++S ++D Y KC + A+++ F +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNI-------------------------------FSQCNSV 404
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
+ VV+TA+ SGY+ + ++FR + + P+ + +V++L I L LG++
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGREL 463
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H +I++ + + A++DMY+KCG + A + F+ + S RD++ +N MI A
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL--SKRDIVSWNSMITRCAQSD 521
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
+ AI +F++M + D ++ A LSAC + G+ M + +++ ++Y
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSE 580
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNAC 523
+ ++DMY + L+ A+ + + + S W + + AC
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAAC 618
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 168/377 (44%), Gaps = 65/377 (17%)
Query: 78 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 137
L+ +L + ++ GKQ+H++++ + + ++ MY+ CGSF +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC-------- 89
Query: 138 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
GKM L++ + WN++I+ +V+NG + +AL +
Sbjct: 90 ------------------GKMFYRLDL-----RRSSIRPWNSIISSFVRNGLLNQALAFY 126
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
+M+ G+ + T ++ AC LK K F+S + C
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFK---------------GIDFLSDTVSSLGMDC 171
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
F SSLI Y G + +LFD + +++ V+W + +GY
Sbjct: 172 NE----------------FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
K ++V K F R + + P+ + VL CA + + LG Q H ++ + ++ +
Sbjct: 216 KCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ ++L+ MYSKCG A K F++++ + D + +N MI+GY G +++ F EM+
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 438 KISLKPDAITFVALLSA 454
+ PDAITF +LL +
Sbjct: 333 SSGVLPDAITFSSLLPS 349
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 51/410 (12%)
Query: 133 FSGCDGVVDLVSK----------NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
F G D + D VS ++++ A GK+D+ +F + + D V WN ++
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ-KDCVIWNVMLN 212
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY + G ++ + F M I N T VLS C + LG +H LV
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV------- 265
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
V SG VDF N SL++ YS G A +LF +S
Sbjct: 266 ---VVSG-VDFEGSIKN--------------------SLLSMYSKCGRFDDASKLFRMMS 301
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+ V W + SGYV+S E F E + ++PD + ++L + + L K
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
Q H YI+R +++D L SAL+D Y KC ++ A+ F DV+++ MI+GY H
Sbjct: 361 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV--DVVVFTAMISGYLH 418
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEI 481
+G ++++F+ ++K+ + P+ IT V++L ++LG + +K+ ++ I
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 482 YHYAC-MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
C ++DMY + ++ A E ++ + D W + + C ++N +
Sbjct: 479 ---GCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPS 524
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 193/441 (43%), Gaps = 48/441 (10%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F +A+I AY K ++ A+ +F + D+V + +M+S Y +G +L++F +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL-HNGLYIDSLEMFRWL 432
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ I +EITL ++L + L + G+++H +++K D ++IDMY+KCG
Sbjct: 433 VKVK--ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
AY +F + +SK D VSWN++I
Sbjct: 491 RMNLAYEIF-------ERLSKR--------------------------DIVSWNSMITRC 517
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
Q+ A+ +F +M GI Y+ ++++ LSAC L GK +H ++K+ S+
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+ S ++D Y KCGN++ A +V+ + K+ + +S+IA + G + + LF + E+
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 305 -----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ + + + S + + FR + P AC +
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY-----ACVVDLFGR 692
Query: 360 LGKQTHAY--ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
G+ T AY + D + L+ N+ AE + + D D Y V+I
Sbjct: 693 AGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
Query: 418 AGYAHHGFENKAIQLFQEMLK 438
+ + E +++ + ++K
Sbjct: 753 SNAHANAREWESVTKVRSLMK 773
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 212 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 271
L+ +L AC+ L+ GK VHA ++ N + + I+ Y CG+ ++ +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 272 IK--SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF 329
++ S +S+I+ + G + +A + + LC F +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFY----------FKMLC------------FGVS 135
Query: 330 REFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD--EKLASALVDMY 387
+ T L+ + + N G + T+S L MD E +AS+L+ Y
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVS------------SLGMDCNEFVASSLIKAY 183
Query: 388 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
+ G I K F V +D +++NVM+ GYA G + I+ F M + P+A+T
Sbjct: 184 LEYGKIDVPSKLFDRVLQ--KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVT 241
Query: 448 FVALLSACRHRGLVELG 464
F +LS C + L++LG
Sbjct: 242 FDCVLSVCASKLLIDLG 258
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
R E IP + ++ L AC+ L GKQ HA+++ ++ D ++ MY+ CG+
Sbjct: 28 RFLEETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGS 85
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
+ K F + + +N +I+ + +G N+A+ + +ML + PD TF L+
Sbjct: 86 FSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLV 145
Query: 453 SAC 455
AC
Sbjct: 146 KAC 148
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 258/448 (57%), Gaps = 3/448 (0%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
DT WN +I G+ + ER+L L+ M+ +N +T S+L AC+ L + +H
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 292
A + K ++ + + +++ Y GN + A ++ I + +S+I GY G M
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 293 KAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 352
A LF ++E+N + WT + SGYV++ + +LF E + ++ + PD + + N L AC
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSAC 257
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
A L GK H+Y+ +T++ MD L L+DMY+KCG + A + F+ + + V
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI--KKKSVQA 315
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+ +I+GYA+HG +AI F EM K+ +KP+ ITF A+L+AC + GLVE G+ F SM+
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV 532
DYN+ P I HY C+VD+ GR L++A F++++P++ +A IWGA L AC+I+ N L
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 533 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 592
++ E L+ ++ +G RYV AN++A + KW++ R+ M+ + K+PGCS I +E
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 593 IHVFTSGDTSHSKADAIYSTLVCLYGKL 620
H F +GD SH + + I S + KL
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKL 523
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 220/499 (44%), Gaps = 80/499 (16%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
L A+ +FD D +N M+ ++ +D + +L L+ RM + + + T ++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPER-SLLLYQRMLCS--SAPHNAYTFPSL 121
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
L + L Q+H+ + K + +A++SLI+ Y+ G+F+ A+ +F D
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
VS N+++ + GKMD+AL +F K E N +SW T+I+GYVQ + AL LF EM
Sbjct: 182 -VSWNSVIKGYVKAGKMDIALTLFRKMAEKN-AISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
+E + +LA+ LSAC L L+ GK +H+ + K + + ++D Y KCG M
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 321
A V+ I KS A ++LI+GY+ G+ +A S +++ Q+
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREA------------------ISKFMEMQK 341
Query: 322 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 381
+ P+ + VL AC+ + GK
Sbjct: 342 M--------------GIKPNVITFTAVLTACSYTGLVEEGK------------------- 368
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
+ YS E+ + L + Y ++ G ++A + QEM L
Sbjct: 369 --LIFYS-------MERDYNLKPTIEH----YGCIVDLLGRAGLLDEAKRFIQEM---PL 412
Query: 442 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH---YACMVDMYGRGNQLE 498
KP+A+ + ALL ACR +ELGE+ + + + YH Y +++ + +
Sbjct: 413 KPNAVIWGALLKACRIHKNIELGEEIGEIL-----IAIDPYHGGRYVHKANIHAMDKKWD 467
Query: 499 KAVEFMRKIPIQIDASIWG 517
KA E R + Q A + G
Sbjct: 468 KAAETRRLMKEQGVAKVPG 486
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 181/421 (42%), Gaps = 52/421 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P + SWN++I Y+KA + A LF + ++ +S+ +M+S Y AD + AL L
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQAD-MNKEALQL 234
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ++ + D ++L L+ A+L + GK +HSY+ KT + LIDMY
Sbjct: 235 FHEMQNS--DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMY 292
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG EA VF KN + +W L
Sbjct: 293 AKCGEMEEALEVF---------------------------------KNIKKKSVQAWTAL 319
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I+GY +G+ A++ F+EM + GI+ N T +VL+AC+ ++ GK + + ++
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKG-NMTKAKRLF 298
G IVD + G + A+ + P +++I G K + K L
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM----PLKPNAVIWGALLKACRIHKNIELG 435
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
+ + E + YV A+ K + + T L+ + + V G +T+
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG-VAKVPGC----STI 490
Query: 359 SLGKQTHAYILRTKLNMD-EKLASALVDMYSKCGNIAYA----EKSFQLVTDSDRDVILY 413
SL TH ++ + + + EK+ S M K Y E LV D +R+ I++
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 414 N 414
Sbjct: 551 Q 551
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 317/613 (51%), Gaps = 71/613 (11%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ F ++ I Y + ++ +R +FDS R++ +N+M+ Y D C +++LF
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND-CLVESIELFLE 307
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
+++ + DE+T + + L+ V G+Q H ++ K +L ++SL+ MYS+C
Sbjct: 308 AIGSKEIVS-DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
GS +++ VF R+ D VSWNT+I+
Sbjct: 367 GSVHKSFGVF-----------------LSMRE----------------RDVVSWNTMISA 393
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
+VQNG + L L EM ++G + + T+ ++LSA + L+ ++GK HA +++ G
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQF 452
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ ++S ++D Y K G +R ++ ++ G +GY+ E
Sbjct: 453 EGMNSYLIDMYSKSGLIRISQKLFEG-------------SGYA----------------E 483
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
R+ W ++ SGY ++ E F +FR+ + + P+ + + ++L AC+ ++ LGKQ
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H + +R L+ + +ASALVDMYSK G I YAE F +R+ + Y MI GY H
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS--QTKERNSVTYTTMILGYGQH 600
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G +AI LF M + +KPDAITFVA+LSAC + GL++ G K F M+E YN+ P H
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQID-ASIWGAFLNACKINNNTTLVKQAEEELLKV 542
Y C+ DM GR ++ +A EF++ + + + A +WG+ L +CK++ L + E L K
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 543 E-ADNGSRY-VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+ N S Y V L+N+YA E KW + ++R+ MR K K G S I + ++ F S D
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRD 780
Query: 601 TSHSKADAIYSTL 613
H + IY +
Sbjct: 781 QEHPHSSEIYDVI 793
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 205/449 (45%), Gaps = 65/449 (14%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
N AR LFD+ V +N+++ + + AL ++RM+ D T ++
Sbjct: 54 NPQLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
L A+ + + GK +H ++++ + S+ +SL++MY C + + +
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF---------- 162
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
+ D+ VF N + V+WNTLI+ YV+ G A F M
Sbjct: 163 ----------------EYDVVRKVF-DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ ++ + + +V A + + +K + L+LK + D Y
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLK------------LGDEY------ 247
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+K F SS I+ Y+ G++ ++R+FDS ERN VW + YV++
Sbjct: 248 -----------VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA--TLSLGKQTHAYILRTKLNMDEK 378
+LF E ++ ++ D + +L A A+ A + LG+Q H ++ + +
Sbjct: 297 CLVESIELFLEAIGSKEIVSDE--VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV 354
Query: 379 LASALVDMYSKCGNIAYAEKSFQL-VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ ++L+ MYS+CG++ KSF + ++ +RDV+ +N MI+ + +G +++ + L EM
Sbjct: 355 IVNSLMVMYSRCGSV---HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEK 466
K K D IT ALLSA + E+G++
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQ 440
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 45/367 (12%)
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 203
S + ++ C+DG +A +F P+ TV WNT+I G++ N AL LF ++K
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPK-PTTVLWNTIIIGFICNNLPHEAL-LFYSRMKK 98
Query: 204 GIEY---NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ + +T +S L AC K LK GK VH +++ S++ V + +++ Y C N
Sbjct: 99 TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN- 157
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
A + +++FD++ +N V W L S YVK+
Sbjct: 158 --APDCF----------------------EYDVVRKVFDNMRRKNVVAWNTLISWYVKTG 193
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN----MD 376
+ + F E + P + VNV A +I + S+ K Y L KL D
Sbjct: 194 RNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSI--SRSIKKANVFYGLMLKLGDEYVKD 250
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQ 434
+ S+ + MY++ G+I + + F DS +R++ ++N MI Y + ++I+LF
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVF----DSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 435 EML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 493
E + + D +T++ SA VELG +F + +++ LP + + MV MY R
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSR 365
Query: 494 GNQLEKA 500
+ K+
Sbjct: 366 CGSVHKS 372
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 315/629 (50%), Gaps = 82/629 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N+F N ++ Y K L ++ L S RDLV++N++LS+ + AL+ M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREM 293
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKC 123
+ + DE T++++L + L ++ GK++H+Y +K + D + F S+L+DMY C
Sbjct: 294 --VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
VF DG D + + WN +IAG
Sbjct: 352 KQVLSGRRVF---------------------DGMFDRKIGL------------WNAMIAG 378
Query: 184 YVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
Y QN + + AL LFI M E G+ N T+A V+ AC + +H V+K
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
++FV + ++D Y + G + A R+F +
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIA-------------------------------MRIFGKME 467
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE----------ALIPDTMIIVNVLGAC 352
+R+ V W + +GYV S+ E L + + E +L P+++ ++ +L +C
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
A + L+ GK+ HAY ++ L D + SALVDMY+KCG + + K F + ++VI
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVIT 585
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+NV+I Y HG +AI L + M+ +KP+ +TF+++ +AC H G+V+ G + F MK
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID-ASIWGAFLNACKINNNTTL 531
DY V P HYAC+VD+ GR ++++A + M +P + A W + L A +I+NN +
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 532 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 591
+ A + L+++E + S YV LAN+Y++ G W++ +R+ M+ + K PGCSWI +
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 592 GIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
+H F +GD+SH +++ + L L+ ++
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 244/534 (45%), Gaps = 87/534 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y K + +FD S R+ VS+NS++S+ + + +AL+ F M +
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE-MALEAFRCMLD--E 193
Query: 70 TIGMDEITLTTMLNLSAKLRV---VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ TL +++ + L + + GKQ+H+Y ++ +L+ F +++L+ MY K G
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKL 252
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
+ V G G DLV +WNT+++ Q
Sbjct: 253 ASS-KVLLGSFGGRDLV--------------------------------TWNTVLSSLCQ 279
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQF 245
N + AL EM+ +G+E ++ T++SVL AC+ L+ L+ GK +HA LKN N F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
V S +VD YC C + V +G +R+FD + +R
Sbjct: 340 VGSALVDMYCNC------KQVLSG-------------------------RRVFDGMFDRK 368
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
+W A+ +GY +++ + LF + L+ ++ + V+ AC S + H
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
++++ L+ D + + L+DMYS+ G I A + F + DRD++ +N MI GY
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM--EDRDLVTWNTMITGYVFSEH 486
Query: 426 ENKAIQLFQEML-----------KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
A+ L +M ++SLKP++IT + +L +C + G++ ++
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNN 528
N+ ++ + +VDMY + L+ + + +IP Q + W + A ++ N
Sbjct: 547 -NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 192/446 (43%), Gaps = 81/446 (18%)
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSKCGSFREA 129
I D +L A L+ + GKQ+H+++ K + ++ +L+++Y KCG F
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
Y VF D +S+ + VSWN+LI+
Sbjct: 153 YKVF-------DRISER--------------------------NQVSWNSLISSLCSFEK 179
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGL---KCLKLGKCVHALVLKNDGCSNQFV 246
E AL F M+++ +E + TL SV++AC+ L + L +GK VHA L+ G N F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFI 238
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
++L+A Y G + +K L S R+
Sbjct: 239 -------------------------------INTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V W + S +++Q + RE E + PD I +VL AC+ L GK+ HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 367 YILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
Y L+ L+ + + SALVDMY C + + F + DR + L+N MIAGY+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF--DRKIGLWNAMIAGYSQNEH 384
Query: 426 ENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEK---FFMSMKEDYNVLPEI 481
+ +A+ LF M + + L ++ T ++ AC G E F + D + +
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ- 443
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKI 507
++DMY R +++ A+ K+
Sbjct: 444 ---NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 161/329 (48%), Gaps = 44/329 (13%)
Query: 167 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 226
++PE+ W L+ V++ + A+ +++MI GI+ + + ++L A L+ ++
Sbjct: 60 RSPEW-----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDME 114
Query: 227 LGKCVHALVLK-NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 285
LGK +HA V K G + V++ +V+ Y KCG+ +VY
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF---GAVY------------------ 153
Query: 286 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
++FD +SERN V W +L S ++ E + FR E + P + +
Sbjct: 154 ----------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSFTL 202
Query: 346 VNVLGACA---IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
V+V+ AC+ + L +GKQ HAY LR K ++ + + LV MY K G +A ++ L
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSK--VLL 259
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ RD++ +N +++ + +A++ +EM+ ++PD T ++L AC H ++
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
G++ ++ ++ + + +VDMY
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMY 348
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 47/228 (20%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ F N ++ Y + + A +F RDLV++N+M++ Y ++ + AL L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED-ALLLLHK 496
Query: 64 MQ---------SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFA 112
MQ ++R ++ + ITL T+L A L + GK++H+Y +K A D++
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA--V 554
Query: 113 LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 172
S+L+DMY+KCG + M+ VF + P+ N
Sbjct: 555 GSALVDMYAKCGC--------------------------------LQMSRKVFDQIPQKN 582
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
++WN +I Y +G + A+ L M+ +G++ N+ T SV +AC+
Sbjct: 583 -VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 305/602 (50%), Gaps = 72/602 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I Y K AR +FD+ S RDL+S+NS+++ A +G + A+ LF MQ R
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA-QNGLEVEAVCLF--MQLLRC 410
Query: 70 TIGMDEITLTTMLNLSAKL-RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
+ D+ T+T++L ++ L + KQ+H + +K N F ++LID YS+ +E
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A + ++ F D V+WN ++AGY Q+
Sbjct: 471 A---------------------------------EILFERHNF-DLVAWNAMMAGYTQSH 496
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ L LF M ++G + TLA+V C L + GK VHA +K+ + +VSS
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
GI+D Y KCG+M A+ FA FDS+ + V
Sbjct: 557 GILDMYVKCGDMSAAQ-----------FA--------------------FDSIPVPDDVA 585
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
WT + SG +++ + E F +F + R ++PD I + A + L G+Q HA
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLM-GVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
L+ D + ++LVDMY+KCG+I A F+ + ++ +N M+ G A HG +
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWNAMLVGLAQHGEGKE 702
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
+QLF++M + +KPD +TF+ +LSAC H GLV K SM DY + PEI HY+C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
D GR +++A + + ++ AS++ L AC++ +T K+ +LL++E + S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
YV L+N+YAA KW+EM R M+G + K PG SWI V+N IH+F D S+ + +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 609 IY 610
IY
Sbjct: 883 IY 884
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 216/492 (43%), Gaps = 74/492 (15%)
Query: 30 DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLR 89
D++S +++ N LS Y + G + L FA M + D++T ML + K+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHS-GQYSALLKCFADM--VESDVECDQVTFILMLATAVKVD 329
Query: 90 VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMV 149
+ G+Q+H +K DL +SLI+MY K F A VF
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD--------------- 374
Query: 150 AACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 209
N D +SWN++IAG QNG A+ LF++++ G++ +Q
Sbjct: 375 ------------------NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 210 HTLASVLSACTGL-KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
+T+ SVL A + L + L L K VH +K + S+ FVS+ ++D Y + M+ AE ++
Sbjct: 417 YTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF- 475
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
+ FD V W A+ +GY +S KL
Sbjct: 476 -------------------------ERHNFD------LVAWNAMMAGYTQSHDGHKTLKL 504
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
F + D + V C ++ GKQ HAY +++ ++D ++S ++DMY
Sbjct: 505 F-ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 448
KCG+++ A+ +F + D + + MI+G +G E +A +F +M + + PD T
Sbjct: 564 KCGDMSAAQFAFDSIPVPDD--VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 449 VALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
L A +E G + + + N + + +VDMY + ++ A ++I
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 509 IQIDASIWGAFL 520
+ ++ + W A L
Sbjct: 681 M-MNITAWNAML 691
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 247/581 (42%), Gaps = 96/581 (16%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT----VA 57
P R F N +I Y K +LT AR +FD RDLVS+NS+L+AYA + C A
Sbjct: 72 PER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
LF ++ +D + +TL+ ML L V + H Y K D +F +L+
Sbjct: 130 FLLFRILR--QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALV 187
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NP-- 169
++Y K G +E +F D+V N M+ A G + A+++ NP
Sbjct: 188 NIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 170 -----------------------EFNDTVSWNTLI------AGYVQNGYMERALTLFIEM 200
ND S + +I + Y+ +G L F +M
Sbjct: 247 ITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM 306
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+E +E +Q T +L+ + L LG+ VH + LK VS+ +++ YCK
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+A +V FD++SER+ + W ++ +G ++
Sbjct: 367 GFARTV-------------------------------FDNMSERDLISWNSVIAGIAQNG 395
Query: 321 -QCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTKLNMDEK 378
+ EAV + R L PD + +VL A ++ LSL KQ H + ++ D
Sbjct: 396 LEVEAVCLFMQLLRC--GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+++AL+D YS+ + AE F+ + D++ +N M+AGY +K ++LF M K
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 439 ISLKPDAITFVALLSACRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ D T + C + G++ ++K Y++ +++ + ++DMY + +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDM 568
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
A IP+ D + W ++ C ++ EEE
Sbjct: 569 SAAQFAFDSIPVPDDVA-WTTMISGC--------IENGEEE 600
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 189/463 (40%), Gaps = 106/463 (22%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGA-DGCDTVALDLFAR 63
++F A+I AY + + +A LF+ + DLV++N+M++ Y + DG T+ L
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
Q R D+ TL T+ L + GKQ+H+Y +K+ DL + S ++DMY KC
Sbjct: 510 KQGERS----DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G A F V D V+ M++ C
Sbjct: 566 GDMSAAQFAFDSIP-VPDDVAWTTMISGC------------------------------- 593
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
++NG ERA +F +M G+ ++ T+A++ A + L L+ G+ +HA LK + ++
Sbjct: 594 -IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
FV + +VD Y KCG++ + Y LF +
Sbjct: 653 PFVGTSLVDMYAKCGSI---DDAYC----------------------------LFKRIEM 681
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
N W A+ G + + + +LF++ ++ + PD + + VL AC+ +S
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSL-GIKPDKVTFIGVLSACSHSGLVS---- 736
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
A M S G+ Y K ++ Y+ +
Sbjct: 737 -----------------EAYKHMRSMHGD--YGIKP---------EIEHYSCLADALGRA 768
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
G +A L + M S++ A + LL+ACR +G E G++
Sbjct: 769 GLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKR 808
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 171/404 (42%), Gaps = 79/404 (19%)
Query: 94 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 153
GK H+ ++ + +F +++LI MYSKCGS A VF
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD------------------- 98
Query: 154 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY-----MERALTLFIEMIEKGIEYN 208
K P+ D VSWN+++A Y Q+ +++A LF + + + +
Sbjct: 99 -------------KMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTS 144
Query: 209 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
+ TL+ +L C + + H K ++FV+ +V+ Y K G ++ + ++
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204
Query: 269 -------------------------GIGIKSPFATSSL------------IAGYSSKGNM 291
I + S F +S L I+G S
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQ 264
Query: 292 TKA-KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
K+ D+ S + S Y+ S Q A+ K F + ++ I+ +
Sbjct: 265 VKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
A + +L+LG+Q H L+ L++ ++++L++MY K +A F + S+RD+
Sbjct: 325 AVKVD-SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM--SERDL 381
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
I +N +IAG A +G E +A+ LF ++L+ LKPD T ++L A
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 225 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
L LGKC HA +L + +F+ + ++ Y KCG++ Y
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTY---------------------- 92
Query: 285 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC-----EAVFKLFREFRTTEALI 339
A+R+FD + +R+ V W ++ + Y +S +C + F LFR R + +
Sbjct: 93 ---------ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR-QDVVY 142
Query: 340 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 399
M + +L C + + H Y + L+ DE +A ALV++Y K G + +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 400 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 451
F+ + RDV+L+N+M+ Y GF+ +AI L L P+ IT L
Sbjct: 203 FEEM--PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 35/185 (18%)
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+ L LGK THA IL + N + L + L+ MYSKCG++ YA + F + DRD++ +N
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM--PDRDLVSWNS 110
Query: 416 MIAGYAHHG---FEN--KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
++A YA EN +A LF+ + + + +T +L C H G V E F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF--- 167
Query: 471 MKEDYNVLPEIYHYAC-------------MVDMYGRGNQLEKAVEFMRKIPIQIDASIWG 517
+ YAC +V++Y + ++++ ++P + D +W
Sbjct: 168 -----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWN 215
Query: 518 AFLNA 522
L A
Sbjct: 216 LMLKA 220
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 320/612 (52%), Gaps = 27/612 (4%)
Query: 12 IIMAYIKAHNLTQARALFDSAS--HRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSAR 68
++ Y + ++T AR +F+ A RD V YN+M++ ++ DG A++LF +M+
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS--AINLFCKMK--H 141
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGK----QMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D T ++L A L +V + Q H+ +K+ ++L+ +YSKC
Sbjct: 142 EGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 125 S----FREAYNVFSGCDGVV--DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
S A VF D ++ D S M+ ++G D+ + + V++N
Sbjct: 199 SSPSLLHSARKVF---DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
+I+GYV G+ + AL + M+ GIE ++ T SV+ AC L+LGK VHA VL+
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
+ S F +S +V Y KCG A +++ + K + ++L++GY S G++ +AK +F
Sbjct: 316 EDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
+ E+N + W + SG ++ E KLF + E P + +CA+
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAY 433
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
G+Q HA +L+ + +AL+ MY+KCG + A + F+ T D + +N +IA
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR--TMPCLDSVSWNALIA 491
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
HG +A+ +++EMLK ++PD IT + +L+AC H GLV+ G K+F SM+ Y +
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
P HYA ++D+ R + A + +P + A IW A L+ C+++ N L A ++
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 539 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 598
L + ++ Y+ L+N++AA G+W E+ R+RK MR + K CSWI +E +H F
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 599 GDTSHSKADAIY 610
DTSH +A+A+Y
Sbjct: 672 DDTSHPEAEAVY 683
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 163/352 (46%), Gaps = 49/352 (13%)
Query: 213 ASVLSACTGLK--CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
A+ L C L+ L+L + VH ++ + + ++D YCK + YA ++ I
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI 75
Query: 271 GIKSPFATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKSQQCEAVFKL 328
A +++++GY + G++T A+ +F+ + R+ V++ A+ +G+ + + L
Sbjct: 76 SEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINL 135
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLG-KQTHAYILRTKLNMDEKLASALVDMY 387
F + + E PD +VL A+ A Q HA L++ +++ALV +Y
Sbjct: 136 FCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 388 SKCGN----IAYAEKSFQLVTDSDR------------------------------DVILY 413
SKC + + A K F + + D ++ Y
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF--FMSM 471
N MI+GY + GF +A+++ + M+ ++ D T+ +++ AC GL++LG++ ++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 472 KEDYNVLPEIYHYA-CMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ED++ +H+ +V +Y + + ++A K+P + D W A L+
Sbjct: 315 REDFS-----FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 158/342 (46%), Gaps = 50/342 (14%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP ++ SWNA++ Y+ + ++ +A+ +F ++++S+ M+S A +G L L
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA-ENGFGEEGLKL 404
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F+ M+ R+ + + + A L C G+Q H+ ++K D S A ++LI MY
Sbjct: 405 FSCMK--REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG EA VF +D VS NA++AA
Sbjct: 463 AKCGVVEEARQVFRTMP-CLDSVSWNALIAALG--------------------------- 494
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH---ALVLK 237
Q+G+ A+ ++ EM++KGI ++ TL +VL+AC+ + G+ V +
Sbjct: 495 -----QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 238 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT--SSLIAGYSSKGNM---- 291
++ + ++D C+ G AESV + K P A +L++G GNM
Sbjct: 550 IPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFK-PTAEIWEALLSGCRVHGNMELGI 606
Query: 292 TKAKRLFDSLSERN--YVVWTALCSGYVKSQQCEAVFKLFRE 331
A +LF + E + Y++ + + + + ++ V KL R+
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRD 648
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/613 (29%), Positives = 314/613 (51%), Gaps = 70/613 (11%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
P ++ +I++Y + + +AR+LFD RD+V++ +M++ YA ++ + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSN-YNARAWECF 99
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M + +E TL+++L ++V+ YG +H +VK + S + +++++MY+
Sbjct: 100 HEM--VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
C M AAC + +++ + + V+W TLI
Sbjct: 158 TCSV---------------------TMEAAC-----------LIFRDIKVKNDVTWTTLI 185
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
G+ G L ++ +M+ + E + + + A + + GK +HA V+K
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
SN V + I+D YC+CG + ++AK F +
Sbjct: 246 SNLPVMNSILDLYCRCGYL-------------------------------SEAKHYFHEM 274
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
+++ + W L S +S EA+ +F+ F + + +P+ +++ ACA A L+ G
Sbjct: 275 EDKDLITWNTLISELERSDSSEALL-MFQRFES-QGFVPNCYTFTSLVAACANIAALNCG 332
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
+Q H I R N + +LA+AL+DMY+KCGNI +++ F + D R+++ + M+ GY
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR-RNLVSWTSMMIGYG 391
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
HG+ +A++LF +M+ ++PD I F+A+LSACRH GLVE G K+F M+ +Y + P+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQ-AEEELL 540
Y C+VD+ GR ++ +A E + ++P + D S WGA L ACK + + L+ + A +++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+++ YV L+ +YAAEGKW + R+RK MR K G SWI VEN + F D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 601 TSHSKADAIYSTL 613
A ++YS L
Sbjct: 572 KMCPNASSVYSVL 584
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 268/498 (53%), Gaps = 45/498 (9%)
Query: 114 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 173
S LI + EA+ +F D S N M++ R+ + A + F + P F D
Sbjct: 97 SLLIGISKDPSRMMEAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMP-FKD 154
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
SWNT+I GY + G ME+A LF M+EK
Sbjct: 155 AASWNTMITGYARRGEMEKARELFYSMMEK------------------------------ 184
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
N+ + ++ Y +CG++ A + ++ A +++I GY +
Sbjct: 185 ---------NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 294 AKRLFDSLS-ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 352
A+ +F ++ +N V W A+ SGYV++ + E KLFR E + P++ + + L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLGC 294
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
+ + L LG+Q H + ++ L D ++L+ MY KCG + A K F+++ +DV+
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM--KKKDVVA 352
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+N MI+GYA HG +KA+ LF+EM+ ++PD ITFVA+L AC H GLV +G +F SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV 532
DY V P+ HY CMVD+ GR +LE+A++ +R +P + A+++G L AC+++ N L
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 533 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 592
+ A E+LL++ + N + YVQLAN+YA++ +W ++ R+RK M+ K+PG SWI + N
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 593 IHVFTSGDTSHSKADAIY 610
+H F S D H + D+I+
Sbjct: 533 VHHFRSSDRIHPELDSIH 550
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 199/468 (42%), Gaps = 84/468 (17%)
Query: 1 MPHRNAFSWNAIIMAYIK-AHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALD 59
M +N +WN++++ K + +A LFD D SYN MLS Y
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVN------- 139
Query: 60 LFARMQSARDTIGM-DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
F + QS D + D + TM+ A+ + +++ Y + N++S +++I
Sbjct: 140 -FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF-YSMMEKNEVS---WNAMIS 194
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
Y +CG +A + F V +V+ AM+ + K+++A +F + V+WN
Sbjct: 195 GYIECGDLEKASHFFK-VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
+I+GYV+N E L LF M+E+GI N L+S L C+ L L+LG+ +H +V K+
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
C++ + ++ YCKCG + A ++ + K A +++I+GY+ GN K
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK----- 368
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
ALC LFRE + PD + V VL AC +
Sbjct: 369 ------------ALC--------------LFREM-IDNKIRPDWITFVAVLLACNHAGLV 401
Query: 359 SLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
++G ++R K+ + +VD+ + G +
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL------------------------ 437
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
+A++L + M +P A F LL ACR VEL E
Sbjct: 438 ---------EEALKLIRSM---PFRPHAAVFGTLLGACRVHKNVELAE 473
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 301/606 (49%), Gaps = 72/606 (11%)
Query: 11 AIIMAYIKAHN-LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
++I ++K N A +FD S ++V++ M++ G A+ F M
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM-GFPREAIRFFLDM--VLS 263
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
D+ TL+++ + A+L + GKQ+HS+ +++ L SL+DMY+KC +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSA---- 317
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN-G 188
DG +D VF E + +SW LI GY++N
Sbjct: 318 -------------------------DGSVDDCRKVF-DRMEDHSVMSWTALITGYMKNCN 351
Query: 189 YMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
A+ LF EMI +G +E N T +S AC L ++GK V K SN V+
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ ++ + K M A+R F+SLSE+N V
Sbjct: 412 NSVISMFVK-------------------------------SDRMEDAQRAFESLSEKNLV 440
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
+ G ++ E FKL E T L ++L A ++ G+Q H+
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
+++ L+ ++ + +AL+ MYSKCG+I A + F + +R+VI + MI G+A HGF
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM--ENRNVISWTSMITGFAKHGFAI 557
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+ ++ F +M++ +KP+ +T+VA+LSAC H GLV G + F SM ED+ + P++ HYACM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VD+ R L A EF+ +P Q D +W FL AC++++NT L K A ++L+++ +
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 607
+ Y+QL+N+YA GKW E +R++M+ + K GCSWI V + IH F GDT+H A
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 608 AIYSTL 613
IY L
Sbjct: 738 QIYDEL 743
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 213/467 (45%), Gaps = 80/467 (17%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASH---RDLVSYNSMLSAYAGADGCDTVALDLFARMQ 65
+N++I Y K+ + +A +F++ RD+VS+++M++ Y G +G + A+ +F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY-GNNGRELDAIKVFVEFL 158
Query: 66 SARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSK 122
+G+ ++ T ++ + V G+ +++KT + S + SLIDM+ K
Sbjct: 159 E----LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 123 C-GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
SF AY VF K E N V+W +I
Sbjct: 215 GENSFENAYKVFD--------------------------------KMSELN-VVTWTLMI 241
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
+Q G+ A+ F++M+ G E ++ TL+SV SAC L+ L LGK +H+ +++
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
+ V +VD Y KC S+ G++ +++FD +
Sbjct: 302 DD--VECSLVDMYAKC----------------------------SADGSVDDCRKVFDRM 331
Query: 302 SERNYVVWTALCSGYVK--SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ + + WTAL +GY+K + EA+ LF E T + P+ + AC +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAI-NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
+GKQ + L + +A++++ M+ K + A+++F+ + S+++++ YN + G
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL--SEKNLVSYNTFLDG 448
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+ +A +L E+ + L A TF +LLS + G + GE+
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 42/214 (19%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADG-CDTVALDLFARMQS-- 66
N++I ++K+ + A+ F+S S ++LVSYN+ L DG C + + ++ S
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL------DGTCRNLNFEQAFKLLSEI 465
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+G+ T ++L+ A + + G+Q+HS +VK ++ ++LI MYSKCGS
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
A VF+ F +N + +SW ++I G+ +
Sbjct: 526 DTASRVFN------------------------------FMEN---RNVISWTSMITGFAK 552
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
+G+ R L F +MIE+G++ N+ T ++LSAC+
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 172/414 (41%), Gaps = 91/414 (21%)
Query: 137 DGV--VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG--- 188
DG+ +D V+ ++++ +C R + V + EF+ D+V +N+LI+ Y ++G
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 189 -------YMER------------------------ALTLFIEMIEKGIEYNQHTLASVLS 217
M R A+ +F+E +E G+ N + +V+
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174
Query: 218 ACTGLKCLKLGKCVHALVLKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPF 276
AC+ + +G+ ++K S+ V ++D + K N
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN----------------- 217
Query: 277 ATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 336
+ A ++FD +SE N V WT + + ++ + F +
Sbjct: 218 -------------SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLS 263
Query: 337 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC---GNI 393
D + +V ACA LSLGKQ H++ +R+ L D + +LVDMY+KC G++
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSV 321
Query: 394 AYAEKSFQLVTDSDRDVILYNVMIAGYAHH-GFENKAIQLFQEML-KISLKPDAITFVAL 451
K F + D V+ + +I GY + +AI LF EM+ + ++P+ TF +
Sbjct: 322 DDCRKVFDRM--EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 452 LSAC-----RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
AC G LG+ F + + +V + + M+ + +++E A
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV------ISMFVKSDRMEDA 427
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
D++ ++L +C LGK HA ++ + D L ++L+ +YSK G+ A AE F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 401 QLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
+ + RDV+ ++ M+A Y ++G E AI++F E L++ L P+ + A++ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 460 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG-NQLEKAVEFMRKIPIQIDASIWGA 518
V +G + + + ++ ++DM+ +G N E A + K+ +++ W
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTL 239
Query: 519 FLNAC 523
+ C
Sbjct: 240 MITRC 244
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVL 236
+ LI ++ G + A++ M GI + T +S+L +C + +LGK VHA
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR-- 87
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
+++F + ++ Y +SLI+ YS G+ KA+
Sbjct: 88 -------------LIEFDIEPDSVLY----------------NSLISLYSKSGDSAKAED 118
Query: 297 LFDSL---SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
+F+++ +R+ V W+A+ + Y + + K+F EF L+P+ V+ AC+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL-GLVPNDYCYTAVIRACS 177
Query: 354 IQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGN-IAYAEKSFQLVTDSDRDVI 411
+ +G+ T ++++T D + +L+DM+ K N A K F + S+ +V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM--SELNVV 235
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF 467
+ +MI GF +AI+ F +M+ + D T ++ SAC + LG++
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 310/599 (51%), Gaps = 51/599 (8%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFARMQSARDTIGM--DEITL 78
L A ++F + +L+ +N+M +A + D V AL L+ M S +G+ + T
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSS--DPVSALKLYVCMIS----LGLLPNSYTF 137
Query: 79 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 138
+L AK + G+Q+H +++K DL + +SLI MY + G +A+ VF
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 198
D+VS A++ G ++ A +F + P D VSWN +I+GY + G + AL LF
Sbjct: 198 R-DVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 199 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
+M++ + ++ T+ +V+SAC ++LG+ VH + + SN + + ++D Y KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 259 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 318
+ A LF+ L ++ + W L GY
Sbjct: 316 ELETACG-------------------------------LFERLPYKDVISWNTLIGGYTH 344
Query: 319 SQQCEAVFKLFRE-FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI---LRTKLN 374
+ LF+E R+ E P+ + ++++L ACA + +G+ H YI L+ N
Sbjct: 345 MNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 375 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
L ++L+DMY+KCG+I A + F + + + +N MI G+A HG + + LF
Sbjct: 403 ASS-LRTSLIDMYAKCGDIEAAHQVFNSILH--KSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 435 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 494
M KI ++PD ITFV LLSAC H G+++LG F +M +DY + P++ HY CM+D+ G
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 495 NQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLA 554
++A E + + ++ D IW + L ACK++ N L + E L+K+E +N YV L+
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 579
Query: 555 NVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
N+YA+ G+WNE+ + R + K K+PGCS I +++ +H F GD H + IY L
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 227/529 (42%), Gaps = 121/529 (22%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
PHR+ S+ A+I Y + A+ LFD +D+VS+N+M+S YA G AL+LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA-ETGNYKEALELF 254
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M + + DE T+ T+++ A+ + G+Q+H ++ + +++LID+YS
Sbjct: 255 KDMM--KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
KC G+++ A +F + P + D +SWNTLI
Sbjct: 313 KC--------------------------------GELETACGLFERLP-YKDVISWNTLI 339
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN-DG 240
GY + AL LF EM+ G N T+ S+L AC L + +G+ +H + K G
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 241 CSN-QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
+N + + ++D Y KCG++ A V F+
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQV-------------------------------FN 428
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
S+ ++ W A+ G+ + +A F LF R + PD + V +L AC+ L
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI-GIQPDDITFVGLLSACSHSGMLD 487
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
LG+ +I RT + D K+ L Y MI
Sbjct: 488 LGR----HIFRT-MTQDYKMTPKLEH---------------------------YGCMIDL 515
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
H G +A ++ M ++PD + + +LL AC+ G VELGE F ++ + P
Sbjct: 516 LGHSGLFKEAEEMINMM---EMEPDGVIWCSLLKACKMHGNVELGESFAENL---IKIEP 569
Query: 480 E-IYHYACMVDMY---GRGNQLEKAVEF-----MRKIP----IQIDASI 515
E Y + ++Y GR N++ K M+K+P I+ID+ +
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 303/606 (50%), Gaps = 71/606 (11%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ Y+K T AR +FD RD VSYN+M+ Y + + + D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL----DQF 303
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D +T++++L LR + K +++YM+K L + LID+Y+KCG A +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
VF N+M E DTVSWN++I+GY+Q+G +
Sbjct: 364 VF------------NSM---------------------ECKDTVSWNSIISGYIQSGDLM 390
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
A+ LF M+ + + T ++S T L LK GK +H+ +K+ C + VS+ ++
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
D Y KCG + G+ K +F S+ + V W
Sbjct: 451 DMYAKCGEV----------------------------GDSLK---IFSSMGTGDTVTWNT 479
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ S V+ ++ + R +E ++PD + L CA A LGK+ H +LR
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
+ ++ +AL++MYSKCG + + + F+ + S RDV+ + MI Y +G KA++
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERM--SRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
F +M K + PD++ F+A++ AC H GLV+ G F MK Y + P I HYAC+VD+
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 492 GRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 551
R ++ KA EF++ +PI+ DASIW + L AC+ + + ++ ++++ D+ +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 552 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYS 611
+N YAA KW+++ IRK ++ K TK PG SWI V +HVF+SGD S +++AIY
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 612 TLVCLY 617
+L LY
Sbjct: 777 SLEILY 782
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 38/383 (9%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
DL NA+V R G + A VF + P D VSWN+LI+GY +GY E AL ++ E+
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
I + T++SVL A L +K G+ +H LK+ S V++G+V Y K
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK---- 254
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+ P T A+R+FD + R+ V + + GY+K +
Sbjct: 255 -----------FRRP----------------TDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
E ++F E + PD + + +VL AC LSL K + Y+L+ ++ +
Sbjct: 288 MVEESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+ L+D+Y+KCG++ A F + +D + +N +I+GY G +A++LF+ M+ +
Sbjct: 346 NILIDVYAKCGDMITARDVFN--SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+ D IT++ L+S ++ G K S + ++ ++DMY + ++ +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 501 VEFMRKIPIQIDASIWGAFLNAC 523
++ + D W ++AC
Sbjct: 463 LKIFSSMGTG-DTVTWNTVISAC 484
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 107/459 (23%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I Y K ++ AR +F+S +D VS+NS++S Y + G A+ LF M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS-GDLMEAMKLFKMMMIMEE 404
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
D IT ++++S +L + +GK +HS +K+ + ++LIDMY+KCG ++
Sbjct: 405 Q--ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+FS G D V+ N +++AC R G L V
Sbjct: 463 LKIFSSM-GTGDTVTWNTVISACVRFGDFATGLQV------------------------- 496
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+M + + + T L C L +LGK +H +L+ S + +
Sbjct: 497 -------TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+++ Y KCG + + R+F+ +S R+ V W
Sbjct: 550 LIEMYSKCGCLE-------------------------------NSSRVFERMSRRDVVTW 578
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T + Y + E + F + + ++PD+++ + ++ AC+ + G +
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKS-GIVPDSVVFIAIIYACSHSGLVDEGLACFEK-M 636
Query: 370 RTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
+T +D + + +VD+ S+ I+ AE+ Q
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ-------------------------- 670
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+ +KPDA + ++L ACR G +E E+
Sbjct: 671 ----------AMPIKPDASIWASVLRACRTSGDMETAER 699
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 67/363 (18%)
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 154
+++H+ ++ D S F LID YS FRE +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSH---FREPAS----------------------- 57
Query: 155 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 214
+L+VF + + WN++I + +NG AL + ++ E + +++T S
Sbjct: 58 ------SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPS 111
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
V+ AC GL ++G V+ +L S+ FV + +VD Y + G + A V+ + ++
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+ +SLI+GYSS G +A ++ L W
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNS----W------------------------- 202
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
++PD+ + +VL A + G+ H + L++ +N + + LV MY K
Sbjct: 203 ---IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 395 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
A + F + RD + YN MI GY +++++F E L KPD +T ++L A
Sbjct: 260 DARRVFDEM--DVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRA 316
Query: 455 CRH 457
C H
Sbjct: 317 CGH 319
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 259 NMRYAESVYAGIGIKSP-FATSSLIAGYSSKGNMTKAKRLFDSLSE-RNYVVWTALCSGY 316
+R ++ +G+ S F + LI YS + +F +S +N +W ++ +
Sbjct: 22 ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAF 81
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
K+ + + + R ++ + PD +V+ ACA +G + IL D
Sbjct: 82 SKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
+ +ALVDMYS+ G + A + F + RD++ +N +I+GY+ HG+ +A++++ E+
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 437 LKISLKPDAITFVALLSACRHRGLVELGE 465
+ PD+ T ++L A + +V+ G+
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
++ HA ++ L+ + + L+D YS A + F+ V+ + ++V L+N +I ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSIIRAFS 82
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
+G +A++ + ++ + + PD TF +++ AC E+G+ + + D ++
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDL 141
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ +VDMY R L +A + ++P++ D W + ++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG 181
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 328/619 (52%), Gaps = 46/619 (7%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFAR 63
+ F N+++ Y++ + +A +LF +DLVS+N +++ YA C+ A LF
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS--NCEWFKAFQLFHN 319
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-SSLIDMYSK 122
+ D + D +T+ ++L + A+L + GK++HSY+++ + L ++ ++LI Y++
Sbjct: 320 LVHKGD-VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
G AY FS L+S D +SWN ++
Sbjct: 379 FGDTSAAYWAFS-------LMSTK--------------------------DIISWNAILD 405
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
+ + + L L ++ + I + T+ S+L C ++ + K VH +K
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLH 465
Query: 243 NQ---FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLF 298
++ + + ++D Y KCGN+ YA ++ G+ + + +SL++GY + G+ A+ LF
Sbjct: 466 DEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF 525
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
+S + W+ + Y +S +FRE + + P+T+ I+N+L CA A+L
Sbjct: 526 TEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA-RGMRPNTVTIMNLLPVCAQLASL 584
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
L +Q H YI+R L D +L L+D+Y+KCG++ +A FQ +D+ RD++++ M+A
Sbjct: 585 HLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQ--SDARRDLVMFTAMVA 641
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
GYA HG +A+ ++ M + ++KPD + +L+AC H GL++ G + + S++ + +
Sbjct: 642 GYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMK 701
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
P + YAC VD+ RG +L+ A F+ ++P++ +A+IWG L AC N L
Sbjct: 702 PTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANH 761
Query: 539 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 598
LL+ E+D+ +V ++N+YAA+ KW + +R M+ KE K GCSW+ V+ +VF S
Sbjct: 762 LLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVS 821
Query: 599 GDTSHSKADAIYSTLVCLY 617
GD SH + D+I+ + LY
Sbjct: 822 GDCSHPRRDSIFDLVNALY 840
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 75/451 (16%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
+++ Y K + + +F D V +N +L+ + + G +T + F M A D
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET--MRFFKAMHFA-DE 117
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG-SFREA 129
+T +L L +L GK MHSY++K + ++L+ MY+K G F +A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
Y F DG+ D D VSWN +IAG+ +N
Sbjct: 178 YTAF---DGIAD------------------------------KDVVSWNAIIAGFSENNM 204
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLK---CLKLGKCVHALVLKNDGCSNQ-F 245
M A F M+++ E N T+A+VL C + + G+ +H+ V++ F
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
V + +V FY + G + +A LF + ++
Sbjct: 265 VCNSLVSFYLRVGRIE-------------------------------EAASLFTRMGSKD 293
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V W + +GY + + F+LF + PD++ I+++L CA L+ GK+ H
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 366 AYILR-TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
+YILR + L D + +AL+ Y++ G+ + A +F L+ S +D+I +N ++ +A
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM--STKDIISWNAILDAFADSP 411
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSAC 455
+ + + L +L ++ D++T ++LL C
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 33/252 (13%)
Query: 204 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
G + V+ AC + L G+ +H V K + VS +++ Y KC M
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM--- 72
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 323
+++F + + VVW + +G S E
Sbjct: 73 ----------------------------DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRE 104
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
+ + F+ + P ++ VL C GK H+YI++ L D + +AL
Sbjct: 105 TM-RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNAL 163
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
V MY+K G I + + +D+DV+ +N +IAG++ + A + F MLK +P
Sbjct: 164 VSMYAKFGFI-FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP 222
Query: 444 DAITFVALLSAC 455
+ T +L C
Sbjct: 223 NYATIANVLPVC 234
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 312/584 (53%), Gaps = 48/584 (8%)
Query: 37 LVSYNSMLSAYAGADGCD-TVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 95
L+ YN ML + A DG T L LF ++ + D TL +L +LR V G+
Sbjct: 11 LLMYNKMLKSLA--DGKSFTKVLALFGELRG--QGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 96 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 155
++H Y VK + + +SL+ MY+ G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLG------------------------------- 95
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLAS 214
K+++ VF + P+ D VSWN LI+ YV NG E A+ +F M E +++++ T+ S
Sbjct: 96 -KIEITHKVFDEMPQ-RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVS 153
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
LSAC+ LK L++G+ ++ V+ S + + + +VD +CKCG + A +V+ + K+
Sbjct: 154 TLSACSALKNLEIGERIYRFVVTEFEMSVR-IGNALVDMFCKCGCLDKARAVFDSMRDKN 212
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+S++ GY S G + +A+ LF+ ++ V+WTA+ +GYV+ + + +LFR +T
Sbjct: 213 VKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
+ PD ++V++L CA L GK H YI ++ +D+ + +ALVDMY+KCG I
Sbjct: 273 A-GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 331
Query: 395 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
A + F + +RD + +I G A +G +A+ L+ EM + ++ DAITFVA+L+A
Sbjct: 332 TALEVFYEI--KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 455 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAS 514
C H G V G K F SM E +NV P+ H +C++D+ R L++A E + K+ + D +
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 515 ---IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRK 571
++ + L+A + N + ++ E+L KVE + S + LA+VYA+ +W ++ +R+
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRR 509
Query: 572 EMRGKEATKLPGCSWIYVENGIHVFTSGDT--SHSKADAIYSTL 613
+M+ K PGCS I ++ H F GD SH K D I S L
Sbjct: 510 KMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 211/460 (45%), Gaps = 45/460 (9%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+++ N+++ Y + +FD RD+VS+N ++S+Y G +G A+ +F RM
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG-NGRFEDAIGVFKRM 138
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
S + DE T+ + L+ + L+ + G++++ ++V T ++S ++L+DM+ KCG
Sbjct: 139 -SQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCG 196
Query: 125 SFREAYNVFSGCDGVVDLVSK--NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
+A VF D + D K +MV G++D A +F ++P D V W ++
Sbjct: 197 CLDKARAVF---DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP-VKDVVLWTAMMN 252
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GYVQ + AL LF M GI + L S+L+ C L+ GK +H + +N
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
++ V + +VD Y KCG + A V F +
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEV-------------------------------FYEIK 341
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
ER+ WT+L G + L+ E + D + V VL AC ++ G+
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL-DAITFVAVLTACNHGGFVAEGR 400
Query: 363 QT-HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVI-LYNVMIAG 419
+ H+ R + + S L+D+ + G + AE+ ++ +SD ++ +Y +++
Sbjct: 401 KIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSA 460
Query: 420 YAHHGFENKAIQLFQEMLKISLK-PDAITFVALLSACRHR 458
++G A ++ +++ K+ + A T +A + A +R
Sbjct: 461 ARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 44/341 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M +N W +++ Y+ + +AR LF+ + +D+V + +M++ Y + D AL+L
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE-ALEL 266
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ+A I D L ++L A+ + GK +H Y+ + + K ++L+DMY
Sbjct: 267 FRCMQTA--GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG ++ AL VF++ E DT SW +L
Sbjct: 325 AKCGC--------------------------------IETALEVFYEIKE-RDTASWTSL 351
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHALVLKND 239
I G NG RAL L+ EM G+ + T +VL+AC + G K H++ +++
Sbjct: 352 IYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHN 411
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT----SSLIAGYSSKGNMTKAK 295
S ++D C+ G + AE + + +S SL++ + GN+ A+
Sbjct: 412 VQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAE 471
Query: 296 RLFDSLSE---RNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
R+ + L + + T L S Y + + E V + R+ +
Sbjct: 472 RVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK 512
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 311/612 (50%), Gaps = 73/612 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+++ Y KA + +F R+ ++++M+S YA G A+ +F ++
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA-TRGRVEEAIKVFNLFLREKE 215
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF-ALS-SLIDMYSKCGSFR 127
+ T +L+ A V G+Q+H +K N L F ALS +L+ MYSKC S
Sbjct: 216 EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK--NGLLGFVALSNALVTMYSKCESLN 273
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
EA +F D D ++++W+ ++ GY QN
Sbjct: 274 EACKMF---------------------DSSGD------------RNSITWSAMVTGYSQN 300
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
G A+ LF M GI+ +++T+ VL+AC+ + L+ GK +H+ +LK
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---------- 350
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
G R+ FAT++L+ Y+ G + A++ FD L ER+
Sbjct: 351 ---------LGFERHL------------FATTALVDMYAKAGCLADARKGFDCLQERDVA 389
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
+WT+L SGYV++ E L+R +T +IP+ + +VL AC+ ATL LGKQ H +
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
++ ++ + SAL MYSKCG++ F+ ++DV+ +N MI+G +H+G +
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFR--RTPNKDVVSWNAMISGLSHNGQGD 506
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+A++LF+EML ++PD +TFV ++SAC H+G VE G +F M + + P++ HYACM
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VD+ R QL++A EF+ I +W L+ACK + L A E+L+ + +
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 607
S YVQL+ +Y A G+ ++ R+ K MR +K GCSWI ++N HVF GDT H +
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Query: 608 AIYSTLVCLYGK 619
LVCL +
Sbjct: 687 ET-KDLVCLVSR 697
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 253/558 (45%), Gaps = 85/558 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT--VALDLFARMQSA 67
N ++ Y K L +A ++F++ +D+VS+NS+++ Y+ G + + LF M+ A
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMR-A 111
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
+D + + TL + + L+ G+Q H+ +VK +SS D+Y
Sbjct: 112 QDILP-NAYTLAGIFKAESSLQSSTVGRQAHALVVK---------MSSFGDIY------- 154
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
VD ++V C+ G ++ L VF PE N T +W+T+++GY
Sbjct: 155 ------------VD----TSLVGMYCKAGLVEDGLKVFAYMPERN-TYTWSTMVSGYATR 197
Query: 188 GYMERAL---TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
G +E A+ LF+ E+G + + + +VLS+ + LG+ +H + +KN
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+S+ +V Y KC ++ A ++ G ++ S+++ GYS G +A +LF
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS----- 311
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
++F + + P IV VL AC+ L GKQ
Sbjct: 312 ----------------------RMF-----SAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H+++L+ +ALVDMY+K G +A A K F + +RDV L+ +I+GY +
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL--QERDVALWTSLISGYVQNS 402
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYH 483
+A+ L++ M + P+ T ++L AC +ELG++ ++K + + E+
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL--EVPI 460
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK-- 541
+ + MY + LE R+ P + D W A ++ N + EE+L
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 542 VEADNGSRYVQLANVYAA 559
+E D+ V N+ +A
Sbjct: 520 MEPDD----VTFVNIISA 533
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 199/456 (43%), Gaps = 72/456 (15%)
Query: 77 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 136
TL L ++ R + G+ +H +++T + L++ Y+KCG +A+++F
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF--- 72
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT- 195
NA++ C+D VSWN+LI GY QNG + + T
Sbjct: 73 ---------NAII---CKD------------------VVSWNSLITGYSQNGGISSSYTV 102
Query: 196 --LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
LF EM + I N +TLA + A + L+ +G+ HALV+K + +V + +V
Sbjct: 103 MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGM 162
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
YCK G + ++F + ERN W+ +
Sbjct: 163 YCKAGLVE-------------------------------DGLKVFAYMPERNTYTWSTMV 191
Query: 314 SGYVKSQQCEAVFKLFREF-RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
SGY + E K+F F R E + VL + A + LG+Q H ++
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
L L++ALV MYSKC ++ A K F + DR+ I ++ M+ GY+ +G +A++L
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F M +KP T V +L+AC +E G++ S ++ +VDMY
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLH-SFLLKLGFERHLFATTALVDMYA 368
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNN 528
+ L A + + + D ++W + ++ N++
Sbjct: 369 KAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSD 403
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ F+ A++ Y KA L AR FD RD+ + S++S Y + + AL L+ R
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV-QNSDNEEALILYRR 413
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M++A I ++ T+ ++L + L + GKQ+H + +K L S+L MYSKC
Sbjct: 414 MKTA--GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NPEFNDTVSW 177
GS + VF D+VS NAM++ +G+ D AL +F + P D V++
Sbjct: 472 GSLEDGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP---DDVTF 527
Query: 178 NTLIAGYVQNGYMERALTLF 197
+I+ G++ER F
Sbjct: 528 VNIISACSHKGFVERGWFYF 547
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 206 EYNQHT--LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
E N HT L L+ + + L G+ VH +++ + ++ +V+FY KCG + A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 323
S++ I K + +SLI GYS G ++ S Y
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGIS---------------------SSYT------ 101
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
V +LFRE R + ++P+ + + A + + ++G+Q HA +++ D + ++L
Sbjct: 102 -VMQLFREMRAQD-ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
V MY K G + K F + +R+ ++ M++GYA G +AI++F L+
Sbjct: 160 VGMYCKAGLVEDGLKVFAYM--PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 309/611 (50%), Gaps = 73/611 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA+I Y+K ++ AR LFD RD++S+N+M+S Y C L+LF M+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE-GLELFFAMRGL-- 291
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
++ D +TLT++++ L G+ +H+Y++ T + +SL MY GS+REA
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+FS E D VSW T+I+GY N
Sbjct: 352 EKLFS---------------------------------RMERKDIVSWTTMISGYEYNFL 378
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
++A+ + M + ++ ++ T+A+VLSAC L L G +H L +K S V++
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+++ Y KC + KA +F ++ +N + W
Sbjct: 439 LINMYSKCKCI-------------------------------DKALDIFHNIPRKNVISW 467
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T++ +G + +C R+ + T L P+ + + L ACA L GK+ HA++L
Sbjct: 468 TSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
RT + +D+ L +AL+DMY +CG + A F +DV +N+++ GY+ G +
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN---SQKKDVTSWNILLTGYSERGQGSMV 582
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++LF M+K ++PD ITF++LL C +V G +F M EDY V P + HYAC+VD
Sbjct: 583 VELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVD 641
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+ GR +L++A +F++K+P+ D ++WGA LNAC+I++ L + + + + +++ +
Sbjct: 642 LLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY 701
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
Y+ L N+YA GKW E+ ++R+ M+ T GCSW+ V+ +H F S D H + I
Sbjct: 702 YILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
Query: 610 YSTLVCLYGKL 620
+ L Y K+
Sbjct: 762 NTVLEGFYEKM 772
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 187/384 (48%), Gaps = 40/384 (10%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KG 204
NA +A R G + A VF K E N SWN L+ GY + GY + A+ L+ M+ G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERN-LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 205 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
++ + +T VL C G+ L GK VH V++ + V + ++ Y KCG+++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK--- 248
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
A+ LFD + R+ + W A+ SGY ++ C
Sbjct: 249 ----------------------------SARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
+LF R ++ PD M + +V+ AC + LG+ HAY++ T +D + ++L
Sbjct: 281 GLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
MY G+ AEK F + +D++ + MI+GY ++ +KAI ++ M + S+KPD
Sbjct: 340 QMYLNAGSWREAEKLFSRM--ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 445 AITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
IT A+LSAC G ++ G E +++K ++ + +++MY + ++KA++
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKA--RLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 504 MRKIPIQIDASIWGAFLNACKINN 527
IP + + W + + ++NN
Sbjct: 456 FHNIP-RKNVISWTSIIAGLRLNN 478
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 185/437 (42%), Gaps = 74/437 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA + +++ NL A +F S R+L S+N ++ YA D A+ L+ RM
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE-AMCLYHRMLWV-G 190
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D T +L + + GK++H ++V+ +L +++LI MY KCG + A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F + P D +SWN +I+GY +NG
Sbjct: 251 RLLFD--------------------------------RMPR-RDIISWNAMISGYFENGM 277
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
L LF M ++ + TL SV+SAC L +LG+ +HA V+ + V +
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+ Y G+ R AE +LF + ++ V W
Sbjct: 338 LTQMYLNAGSWREAE-------------------------------KLFSRMERKDIVSW 366
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T + SGY + + +R +++ PD + + VL ACA L G + H +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ +L +A+ L++MYSKC I A F + ++VI + +IAG N+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNI--PRKNVISWTSIIAGLR---LNNRC 480
Query: 430 IQ--LFQEMLKISLKPD 444
+ +F +K++L+P+
Sbjct: 481 FEALIFLRQMKMTLQPN 497
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
+ G NG +E A+ L M E + ++ +++ C + + G V+++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL---- 121
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
S + +G++ ++ +A + GN+ A +F
Sbjct: 122 ------------------------SSMSSLGVE---LGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+SERN W L GY K + L+ + PD VL C L+
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIA 418
GK+ H +++R +D + +AL+ MY KCG++ KS +L+ D RD+I +N MI+
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDV----KSARLLFDRMPRRDIISWNAMIS 270
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
GY +G ++ ++LF M +S+ PD +T +++SAC G LG
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 299/604 (49%), Gaps = 69/604 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y + +L A LFD S + VS +M+SAYA G A+ LF+ M ++ D
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA-EQGILDKAVGLFSGMLASGD 180
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
TT+L R + +G+Q+H+++++ + + +++MY KCG A
Sbjct: 181 KPPSS--MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF MA+ K P V+ L+ GY Q G
Sbjct: 239 KRVFD------------------------QMAV----KKP-----VACTGLMVGYTQAGR 265
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL LF++++ +G+E++ + VL AC L+ L LGK +HA V K S V +
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+VDFY KC + A R F + E N V W
Sbjct: 326 LVDFYIKCSSFE-------------------------------SACRAFQEIREPNDVSW 354
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+A+ SGY + Q E K F+ R+ A I ++ ++ AC++ A ++G Q HA +
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ L + SAL+ MYSKCG + A + F+ + + D ++ + I+G+A++G ++A
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD--IVAWTAFISGHAYYGNASEA 472
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++LF++M+ +KP+++TF+A+L+AC H GLVE G+ +M YNV P I HY CM+D
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+Y R L++A++FM+ +P + DA W FL+ C + N L + A EEL +++ ++ +
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
YV N+Y GKW E + K M + K CSWI + IH F GD H + I
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 610 YSTL 613
Y L
Sbjct: 653 YEKL 656
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 143/345 (41%), Gaps = 37/345 (10%)
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ A EM + G+ + ++ + AC L+ L G+ +H + + + +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++ YC+C ++ A +LFD +SE N V
Sbjct: 124 VLQMYCECRSLE-------------------------------DADKLFDEMSELNAVSR 152
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T + S Y + + LF + P +M +L + L G+Q HA+++
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY-TTLLKSLVNPRALDFGRQIHAHVI 211
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
R L + + + +V+MY KCG + A++ F + + V +M+ GY G A
Sbjct: 212 RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMV-GYTQAGRARDA 269
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++LF +++ ++ D+ F +L AC + LG++ + + + E+ +VD
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPLVD 328
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA-CKINNNTTLVK 533
Y + + E A ++I D S W A ++ C+++ VK
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVS-WSAIISGYCQMSQFEEAVK 372
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 300/629 (47%), Gaps = 86/629 (13%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
I+ Y K + AR +FD +D + +N+M+S Y + +Q RD I
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM-------YVESIQVFRDLI 212
Query: 72 G-----MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+D TL +L A+L+ + G Q+HS KT + L+ I +YSKCG
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
KM AL ++ P D V++N +I GY
Sbjct: 273 ------------------------------KMGSALFREFRKP---DIVAYNAMIHGYTS 299
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
NG E +L+LF E++ G TL S++ L + +H LK++ S+ V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASV 356
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
S+ + Y K + A++LFD E++
Sbjct: 357 STALTTVYSKLNEIE-------------------------------SARKLFDESPEKSL 385
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
W A+ SGY ++ E LFRE + +E P+ + I +L ACA LSLGK H
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+ T +++AL+ MY+KCG+IA A + F L+T ++ + +N MI+GY HG
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK--KNEVTWNTMISGYGLHGQG 502
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
+A+ +F EML + P +TF+ +L AC H GLV+ G++ F SM Y P + HYAC
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
MVD+ GR L++A++F+ + I+ +S+W L AC+I+ +T L + E+L +++ DN
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 606
+V L+N+++A+ + + +R+ + ++ K PG + I + HVFTSGD SH +
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 607 DAIYSTLVCLYGKL----YLTFTELKQLD 631
IY L L GK+ Y TEL D
Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELALHD 711
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 41/359 (11%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCV 231
D +N L+ G+ N +L++F + + ++ N T A +SA +G + + G+ +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 232 HALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
H + DGC ++ + S IV Y K +
Sbjct: 142 HGQAVV-DGCDSELLLGSNIVKMYFKFWRVE----------------------------- 171
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
A+++FD + E++ ++W + SGY K++ ++FR+ DT ++++L
Sbjct: 172 --DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
A A L LG Q H+ +T + + + + +YSKCG I F+ D+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP--DI 287
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
+ YN MI GY +G ++ LF+E++ + + T V+L+ H L+ + +
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK 347
Query: 471 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNT 529
N L + +Y + N++E A + + P + S W A ++ N T
Sbjct: 348 S----NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS-WNAMISGYTQNGLT 401
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 295/556 (53%), Gaps = 43/556 (7%)
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
T++++ + + + +H+ +++T +D F + LI + S S AY+VFS
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS----- 85
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
+ NP + + +I G+V +G ++L+
Sbjct: 86 -------------------------YVSNP---NVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
MI + + + + SVL AC LK+ + +HA VLK S++ V +++ Y K G
Sbjct: 118 MIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A+ ++ + + A + +I YS G + +A LF + ++ V WTA+ G V++
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
++ +LFRE + E + + V VL AC+ L LG+ H+++ ++ + +
Sbjct: 234 KEMNKALELFREMQM-ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
+AL++MYS+CG+I A + F+++ D+DVI YN MI+G A HG +AI F++M+
Sbjct: 293 GNALINMYSRCGDINEARRVFRVM--RDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 350
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
+P+ +T VALL+AC H GL+++G + F SMK +NV P+I HY C+VD+ GR +LE+
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
A F+ IPI+ D + G L+ACKI+ N L ++ + L + E + YV L+N+YA+
Sbjct: 411 AYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS 470
Query: 560 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGK 619
GKW E IR+ MR K PGCS I V+N IH F GD +H +AIY L L
Sbjct: 471 SGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL--N 528
Query: 620 LYLTFTELKQLDEIQG 635
L F E Q+D I G
Sbjct: 529 RILRFKE-NQIDIIMG 543
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 42/306 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ + +I Y + + +A LF +D V + +M+ + AL+L
Sbjct: 184 MPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK-ALEL 242
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ + + +E T +L+ + L + G+ +HS++ +LS F ++LI+MY
Sbjct: 243 FREMQM--ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 300
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
S+CG EA VF RD D +S+NT+
Sbjct: 301 SRCGDINEARRVFR-----------------VMRD----------------KDVISYNTM 327
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I+G +G A+ F +M+ +G NQ TL ++L+AC+ L +G V + +
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 387
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSP-FATSSLIAGYSSKGNMTK----A 294
Q G IVD + G + A I I+ +L++ GNM A
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 295 KRLFDS 300
KRLF+S
Sbjct: 448 KRLFES 453
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/609 (29%), Positives = 296/609 (48%), Gaps = 86/609 (14%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M RN SWN ++ YIK + +AR +F+ R++VS+ +M+ Y +G A L
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYM-QEGMVGEAESL 132
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F RM +E++ T M LID
Sbjct: 133 FWRMPER------NEVSWTVMFG-------------------------------GLID-D 154
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+ R+ Y++ V D+V+ M+ CR+G++D A +F + E N V+W T+
Sbjct: 155 GRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERN-VVTWTTM 209
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I GY QN ++ A LF M EK T S S G
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEK-------TEVSWTSMLLG------------------- 243
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
Y G + AE + + +K A +++I G+ G ++KA+R+FD
Sbjct: 244 -------------YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ +R+ W + Y + LF + + + + P ++++L CA A+L
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQK-QGVRPSFPSLISILSVCATLASLQY 349
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
G+Q HA+++R + + D +AS L+ MY KCG + A+ F S +D+I++N +I+GY
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF--SSKDIIMWNSIISGY 407
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
A HG +A+++F EM P+ +T +A+L+AC + G +E G + F SM+ + V P
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
+ HY+C VDM GR Q++KA+E + + I+ DA++WGA L ACK ++ L + A ++L
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+ E DN YV L+++ A+ KW ++ +RK MR +K PGCSWI V +H+FT G
Sbjct: 528 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG 587
Query: 601 TSHSKADAI 609
+ A+
Sbjct: 588 IKNHPEQAM 596
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
+ G + A + + K+ + +S+++GY S G +A++LFD +SERN V W L SG
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHAYILRTKLN 374
Y+K+ ++ E R L+P+ NV+ A ++ + G A L +
Sbjct: 89 YIKN-------RMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWR-- 135
Query: 375 MDEKLASALVDMYSKC---GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
M E+ + M+ G I A K + ++ +DV+ MI G G ++A
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMM--PVKDVVASTNMIGGLCREGRVDEARL 193
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
+F EM + + +T+ +++ R V++ K F M E V + M+ Y
Sbjct: 194 IFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV-----SWTSMLLGY 244
Query: 492 GRGNQLEKAVEFMRKIPIQ 510
++E A EF +P++
Sbjct: 245 TLSGRIEDAEEFFEVMPMK 263
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 186/611 (30%), Positives = 320/611 (52%), Gaps = 15/611 (2%)
Query: 13 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 72
I + K+ + AR +FD D V++N+ML++Y+ G A+ LF +++ +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRL-GLHQEAIALFTQLRFSDAKP- 68
Query: 73 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 132
D+ + T +L+ A L V +G+++ S ++++ S +SLIDMY KC A V
Sbjct: 69 -DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 133 FSG--CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
F CD + V+ +++ A + + AL+VF + P+ +WN +I+G+ G +
Sbjct: 128 FRDMCCDSRNE-VTWCSLLFAYMNAEQFEAALDVFVEMPK-RVAFAWNIMISGHAHCGKL 185
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVSSG 249
E L+LF EM+E + + +T +S+++AC+ + G+ VHA++LKN S +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++ FY K G+ A I + + + +S+I G KA +F E+N V W
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T + +GY ++ E + F E + + D VL AC+ A L GK H ++
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKS-GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ +ALV++Y+KCG+I A+++F + +++D++ +N M+ + HG ++A
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI--ANKDLVSWNTMLFAFGVHGLADQA 422
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++L+ M+ +KPD +TF+ LL+ C H GLVE G F SM +DY + E+ H CM+D
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Query: 490 MYGRGNQLEKAVE----FMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEAD 545
M+GRG L +A + + + + S W L AC + +T L ++ + L E
Sbjct: 483 MFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 546 NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSK 605
+V L+N+Y + G+W E +R+EM + K PGCSWI V N + F GD+SH +
Sbjct: 543 EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Query: 606 ADAIYSTLVCL 616
+ + TL CL
Sbjct: 603 LEELSETLNCL 613
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 216/454 (47%), Gaps = 45/454 (9%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN +W +++ AY+ A A +F R ++N M+S +A ++ L LF
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKE 194
Query: 64 MQSARDTIGMDEITLTTMLN-LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
M + D T ++++N SA V YG+ +H+ M+K + A +S++ Y+K
Sbjct: 195 MLESE--FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
GS +A + V+ VS N+++ AC + G+ + AL VF PE N V+W T+I
Sbjct: 253 LGSRDDAMRELESIE-VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN-IVTWTTMIT 310
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY +NG E+AL F+EM++ G++ + +VL AC+GL L GK +H ++
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG 370
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+V + +V+ Y KCG+++ A+ + I K + ++++ + G +A +L+D++
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM- 429
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+ SG + PD + + +L C+ + G
Sbjct: 430 ---------IASG----------------------IKPDNVTFIGLLTTCSHSGLVEEGC 458
Query: 363 QTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEK----SFQLVTDSDRDVILYNVMI 417
+++ ++ ++ + ++DM+ + G++A A+ LVTDS + ++
Sbjct: 459 MIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLG 518
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 451
A H + + + ++LKI+ + ++FV L
Sbjct: 519 ACSTH--WHTELGREVSKVLKIAEPSEEMSFVLL 550
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
+S IA + G + A+++FD + E + V W + + Y + + LF + R ++A
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
PD +L CA + G++ + ++R+ + ++L+DMY KC + A K
Sbjct: 68 -PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 399 SFQ-LVTDSDRDV------------------------------ILYNVMIAGYAHHGFEN 427
F+ + DS +V +N+MI+G+AH G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSAC 455
+ LF+EML+ KPD TF +L++AC
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 6 AFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ 65
A+ NA++ Y K ++ +A F +++DLVS+N+ML A+ G G AL L+ M
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAF-GVHGLADQALKLYDNMI 430
Query: 66 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKCG 124
++ I D +T +L + +V G + MVK L ++ +IDM+ + G
Sbjct: 431 AS--GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGG 488
Query: 125 SFREAYNVFSGCDGVVDLVSKNA----MVAACCRDGKMDMALNV--FWKNPEFNDTVSWN 178
EA ++ + +V S N+ ++ AC ++ V K E ++ +S+
Sbjct: 489 HLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFV 548
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIE 206
L Y G + + EM+E+G++
Sbjct: 549 LLSNLYCSTGRWKEGEDVRREMVERGMK 576
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 317/575 (55%), Gaps = 8/575 (1%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
++ S+N ++ Y+++ L A LFD R VSY +++ YA + + A++LF M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAMELFREM 164
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
++ I ++E+TL T+++ + L + + + S +K + F ++L+ MY C
Sbjct: 165 RNL--GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
++A +F +LV+ N M+ + G ++ A +F + E D VSW T+I G
Sbjct: 223 CLKDARKLFDEMPER-NLVTWNVMLNGYSKAGLIEQAEELFDQITE-KDIVSWGTMIDGC 280
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++ ++ AL + EM+ G++ ++ + +LSA G +H ++K
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD 340
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSE 303
F+ + I+ FY +++ A + +K A+ ++LIAG+ G + +A+ +FD +
Sbjct: 341 FLQATIIHFYAVSNDIKLALQQFEA-SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
++ W A+ SGY +S + LFRE ++ + PD + +V+V A + +L GK+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAH 422
H Y+ + + ++ L +A++DMY+KCG+I A F + S + +N +I G A
Sbjct: 460 AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
HG A+ L+ ++ + +KP++ITFV +LSAC H GLVELG+ +F SMK D+ + P+I
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK 579
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
HY CMVD+ G+ +LE+A E ++K+P++ D IWG L+A + + N + + A EL +
Sbjct: 580 HYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAI 639
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE 577
+ +G V L+NVYA G+W ++ +R+EMR ++
Sbjct: 640 DPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRD 674
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 221/466 (47%), Gaps = 42/466 (9%)
Query: 75 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 134
E L + L A V G+Q+H ++K+ D + + +S+++MY+KC +A +VF
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 135 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 194
+D S N MV R ++ AL +F PE VS+ TLI GY QN A+
Sbjct: 101 D-HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPE-RSCVSYTTLIKGYAQNNQWSEAM 158
Query: 195 TLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFY 254
LF EM GI N+ TLA+V+SAC+ L + + + +L +K FVS+ ++ Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 255 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 314
C C ++ A ++ + ++ + ++ GYS G + +A+ LFD ++E++ V W +
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 315 GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 374
G ++ Q + + E + P +++V++L A A S G Q H I++ +
Sbjct: 279 GCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 375 MDEKLASALVDMYSKCGNIAYAEKSFQL-VTD---------------------------- 405
+ L + ++ Y+ +I A + F+ V D
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELG 464
D+D+ +N MI+GYA A+ LF+EM+ S +KPDAIT V++ SA G +E G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 465 EKFFMSMKEDY----NVLPEIYHYACMVDMYGRGNQLEKAVEFMRK 506
++ DY + P A ++DMY + +E A+ +
Sbjct: 458 KR-----AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQ 498
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 199/431 (46%), Gaps = 47/431 (10%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGC---DTVA 57
MP RN +WN ++ Y KA + QA LFD + +D+VS+ +M+ DGC + +
Sbjct: 234 MPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI------DGCLRKNQLD 287
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
L + R + E+ + +L+ SA+ G Q+H +VK D F +++I
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 118 DMYSKCGSFREAYNVFSGCDGVVD-LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
Y+ + A F V D + S+NA++A ++G ++ A VF + + D S
Sbjct: 348 HFYAVSNDIKLALQQFEA--SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD-KDIFS 404
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
WN +I+GY Q+ + AL LF EMI ++ + T+ SV SA + L L+ GK H +
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
+ N +++ I+D Y KCG++ A +++ + TK
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIF----------------------HQTK-- 500
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
++S W A+ G + L+ + ++ + P+++ V VL AC
Sbjct: 501 ----NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLSACCHA 555
Query: 356 ATLSLGKQTHAYILRTK--LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
+ LGK T+ +++ + D K +VD+ K G + A++ + + DV+++
Sbjct: 556 GLVELGK-TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP-VKADVMIW 613
Query: 414 NVMIAGYAHHG 424
++++ HG
Sbjct: 614 GMLLSASRTHG 624
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 305/600 (50%), Gaps = 70/600 (11%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
A++ Y K ++ A F ++V +N ML AY D + +F +MQ +
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN-SFRIFRQMQI--EE 485
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I ++ T ++L +L + G+Q+HS ++KT L+ + S LIDMY+K G A+
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
++ G D VSW T+IAGY Q +
Sbjct: 546 DILIRFAG---------------------------------KDVVSWTTMIAGYTQYNFD 572
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
++ALT F +M+++GI ++ L + +SAC GL+ LK G+ +HA
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA----------------- 615
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
++ +G PF ++L+ YS G + ++ F+ + + W
Sbjct: 616 -------------QACVSGFSSDLPF-QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
AL SG+ +S E ++F E + + + + A + A + GKQ HA I +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
T + + ++ +AL+ MY+KCG+I+ AEK F V S ++ + +N +I Y+ HGF ++A+
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNAIINAYSKHGFGSEAL 778
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
F +M+ +++P+ +T V +LSAC H GLV+ G +F SM +Y + P+ HY C+VDM
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 550
R L +A EF++++PI+ DA +W L+AC ++ N + + A LL++E ++ + Y
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 551 VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIY 610
V L+N+YA KW+ R++M+ K K PG SWI V+N IH F GD +H AD I+
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 195/446 (43%), Gaps = 70/446 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I Y + + AR +FD +D S+ +M+S + + C+ A+ LF M
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE-CEAEAIRLFCDMYVL-- 282
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I +++L+ K+ + G+Q+H ++K + ++L+ +Y G+ A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
++FS N D V++NTLI G Q GY
Sbjct: 343 EHIFS---------------------------------NMSQRDAVTYNTLINGLSQCGY 369
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E+A+ LF M G+E + +TLAS++ AC+ L G+ +HA K SN +
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+++ Y KC ++ A + ++ N V+W
Sbjct: 430 LLNLYAKCADIETALDYFLETEVE-------------------------------NVVLW 458
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ Y F++FR+ + E ++P+ ++L C L LG+Q H+ I+
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEE-IVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+T ++ + S L+DMY+K G + A L+ + +DV+ + MIAGY + F++KA
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 430 IQLFQEMLKISLKPDAITFVALLSAC 455
+ F++ML ++ D + +SAC
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSAC 601
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 217/493 (44%), Gaps = 78/493 (15%)
Query: 16 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 75
Y+ +L A +FD R + ++N M+ A + V LF RM S + + +E
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV-FGLFVRMVS--ENVTPNE 186
Query: 76 ITLTTMLNL----SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
T + +L S VV +Q+H+ ++ S + LID+YS
Sbjct: 187 GTFSGVLEACRGGSVAFDVV---EQIHARILYQGLRDSTVVCNPLIDLYS---------- 233
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
R+G +D+A VF D SW +I+G +N
Sbjct: 234 ----------------------RNGFVDLARRVF-DGLRLKDHSSWVAMISGLSKNECEA 270
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
A+ LF +M GI + +SVLSAC ++ L++G+ +H LVLK S+ +V + +V
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
Y GN+ AE +++ + + ++LI G S G KA LF +
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH--------- 381
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ L PD+ + +++ AC+ TL G+Q HAY +
Sbjct: 382 -----------------------LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
+ K+ AL+++Y+KC +I A F L T+ + +V+L+NVM+ Y + +
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYF-LETEVE-NVVLWNVMLVAYGLLDDLRNSFR 476
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
+F++M + P+ T+ ++L C G +ELGE+ + + N Y + ++DMY
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMY 535
Query: 492 GRGNQLEKAVEFM 504
+ +L+ A + +
Sbjct: 536 AKLGKLDTAWDIL 548
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 221/517 (42%), Gaps = 80/517 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA++ Y NL A +F + S RD V+YN++++ + G A++LF RM D
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC-GYGEKAMELFKRMH--LD 383
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D TL +++ + + G+Q+H+Y K + +L+++Y+KC
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD---- 439
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
++ AL+ F + E + V WN ++ Y
Sbjct: 440 ----------------------------IETALDYFLET-EVENVVLWNVMLVAYGLLDD 470
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ + +F +M + I NQ+T S+L C L L+LG+ +H+ ++K + N +V S
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 250 IVDFYCKCGNMRYAESV---YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
++D Y K G + A + +AG ++
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAG----------------------------------KDV 556
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V WT + +GY + + FR+ + D + + N + ACA L G+Q HA
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+ + D +ALV +YS+CG I + +F+ D I +N +++G+ G
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN--IAWNALVSGFQQSGNN 673
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYA 485
+A+++F M + + + TF + + A ++ G++ + K Y+ E+ +
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN-- 731
Query: 486 CMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
++ MY + + A + ++ + + S W A +NA
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINA 767
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 42/370 (11%)
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
G + A VF + PE +WN +I + LF+ M+ + + N+ T + V
Sbjct: 134 GDLYGAFKVFDEMPE-RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 216 LSACTGLK-CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
L AC G + + +HA +L Y G+ S
Sbjct: 193 LEACRGGSVAFDVVEQIHARIL------------------------------YQGLR-DS 221
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA-VFKLFREFR 333
+ LI YS G + A+R+FD L +++ W A+ SG K++ CEA +LF +
Sbjct: 222 TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE-CEAEAIRLFCDMY 280
Query: 334 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 393
++P +VL AC +L +G+Q H +L+ + D + +ALV +Y GN+
Sbjct: 281 VL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 394 AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
AE F + S RD + YN +I G + G+ KA++LF+ M L+PD+ T +L+
Sbjct: 340 ISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 454 ACRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 512
AC G + G++ + K + +I ++++Y + +E A+++ + ++ +
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKI--EGALLNLYAKCADIETALDYFLETEVE-N 454
Query: 513 ASIWGAFLNA 522
+W L A
Sbjct: 455 VVLWNVMLVA 464
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 191/464 (41%), Gaps = 109/464 (23%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
NA+ + +I Y K L A + + +D+VS+ +M++ Y + D AL F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-FDDKALTTFRQM 582
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
I DE+ LT ++ A L+ + G+Q+H+ +
Sbjct: 583 LDR--GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG------------------- 621
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
FS DL +NA+V R GK++ + F + E D ++WN L++G+
Sbjct: 622 --------FSS-----DLPFQNALVTLYSRCGKIEESYLAF-EQTEAGDNIAWNALVSGF 667
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
Q+G E AL +F+ M +GI+ N T S + A + +K GK VHA++ K S
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
V + ++ Y KCG++ AE + + K+ + +++I YS G ++A FD +
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N + P+ + +V VL AC +
Sbjct: 788 N--------------------------------VRPNHVTLVGVLSAC-----------S 804
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAE---KSFQLVTDSDRDVILYNVMIAGYA 421
H LVD IAY E + L + V + +++
Sbjct: 805 HI---------------GLVDK-----GIAYFESMNSEYGLSPKPEHYVCVVDMLTRA-- 842
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
G ++A + QEM +KPDA+ + LLSAC +E+GE
Sbjct: 843 --GLLSRAKEFIQEM---PIKPDALVWRTLLSACVVHKNMEIGE 881
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 307/612 (50%), Gaps = 71/612 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
++++ Y K + + +FD RD+ S+N+++S + + + AL+LF RM+S+
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK-ALELFGRMESS-- 202
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ ++LT ++ ++L + GK++H VK +L ++ S+L+DMY KC
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC---- 258
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+++A VF K P V+WN++I GYV G
Sbjct: 259 ----------------------------LEVAREVFQKMPR-KSLVAWNSMIKGYVAKGD 289
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ + + MI +G +Q TL S+L AC+ + L GK +H V+++ ++ +V+
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++D Y KCG AE+V++ + + +I+ Y S GN KA ++D +
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM-------- 401
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ + PD + +VL AC+ A L GKQ H I
Sbjct: 402 ------------------------VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
++L DE L SAL+DMYSKCGN A + F + +DV+ + VMI+ Y HG +A
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK--KDVVSWTVMISAYGSHGQPREA 495
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
+ F EM K LKPD +T +A+LSAC H GL++ G KFF M+ Y + P I HY+CM+D
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 490 MYGRGNQLEKAVEFMRKIPIQID-ASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
+ GR +L +A E +++ P D A + +AC ++ +L + L++ D+ S
Sbjct: 556 ILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAS 615
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
Y+ L N+YA+ W+ R+R +M+ K PGCSWI + + + F + D SH +A+
Sbjct: 616 TYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAEN 675
Query: 609 IYSTLVCLYGKL 620
+Y L L G +
Sbjct: 676 VYECLALLSGHM 687
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 236/521 (45%), Gaps = 74/521 (14%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHR-DLVSYNSMLSAYAGADGCDTVALDLFA 62
R+ ++I Y + AR +F++ R D+ +NS++S Y+ + L++F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYS-KNSMFHDTLEVFK 95
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
R+ + + D T ++ L G+ +H+ +VK+ SSL+ MY+K
Sbjct: 96 RLLNCSICVP-DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
+N+F +L VF + PE D SWNT+I+
Sbjct: 155 -------FNLFEN-------------------------SLQVFDEMPE-RDVASWNTVIS 181
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
+ Q+G E+AL LF M G E N +L +SAC+ L L+ GK +H +K
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+++V+S +VD Y KC + A V+ + KS A +S+I GY +KG+
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD------------ 289
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
S+ C + E P + ++L AC+ L GK
Sbjct: 290 ----------------SKSCVEILNRM----IIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI-LYNVMIAGYA 421
H Y++R+ +N D + +L+D+Y KCG AE F + + +DV +NVMI+ Y
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF---SKTQKDVAESWNVMISSYI 386
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
G KA++++ +M+ + +KPD +TF ++L AC +E G++ +S+ E E+
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
A ++DMY + ++A IP + D W ++A
Sbjct: 447 LLSA-LLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/632 (28%), Positives = 313/632 (49%), Gaps = 67/632 (10%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N FSWN I + ++ N ++ L Y ML GC D F
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLL-----------YKQMLR-----HGCCESRPDHF--- 157
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
T + + A LR+ G + +++K +L ++ I M++ CG
Sbjct: 158 ------------TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCG 205
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
M+ A VF ++P D VSWN LI GY
Sbjct: 206 D--------------------------------MENARKVFDESP-VRDLVSWNCLINGY 232
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+ G E+A+ ++ M +G++ + T+ ++S+C+ L L GK + V +N
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+ + ++D + KCG++ A ++ + ++ + +++I+GY+ G + +++LFD + E+
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
+ V+W A+ G V++++ + LF+E +T+ PD + +++ L AC+ L +G
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK-PDEITMIHCLSACSQLGALDVGIWI 411
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H YI + L+++ L ++LVDMY+KCGNI+ A F + R+ + Y +I G A HG
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYTAIIGGLALHG 469
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
+ AI F EM+ + PD ITF+ LLSAC H G+++ G +F MK +N+ P++ HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
+ MVD+ GR LE+A M +P++ DA++WGA L C+++ N L ++A ++LL+++
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
+ YV L +Y W + R R+ M + K+PGCS I V + F D S
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 605 KADAIYSTLVCLYGKLYLTFTELKQLDEIQGN 636
+++ IY L CL + + + L EI N
Sbjct: 650 ESEKIYDRLHCLGRHMRSSLSVLFSEYEITNN 681
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 172/405 (42%), Gaps = 72/405 (17%)
Query: 139 VVDLVSKNAMVAACC--RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 196
++D + + ++A C +D ++ + K E + SWN I G+ ++ + + L
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKIL-KGIENPNIFSWNVTIRGFSESENPKESFLL 140
Query: 197 FIEMIEKGI---EYNQHTLASVLSACTGLKCLKLGKCV--HALVLKNDGCSNQFVSSGIV 251
+ +M+ G + T + C L+ LG + H L L+ + S+ V + +
Sbjct: 141 YKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSH--VHNASI 198
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
+ CG+M A V+ +SP R+ V W
Sbjct: 199 HMFASCGDMENARKVFD----ESPV---------------------------RDLVSWNC 227
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
L +GY K + E +++ +E + PD + ++ ++ +C++ L+ GK+ + Y+
Sbjct: 228 LINGYKKIGEAEKAIYVYK-LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSF----------------------------QLV 403
L M L +AL+DM+SKCG+I A + F +L
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 404 TD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
D ++DV+L+N MI G A+ LFQEM + KPD IT + LSAC G ++
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
+G + E Y++ + +VDMY + + +A+ I
Sbjct: 407 VG-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 263 AESVYAGIGIKSPFATSSLIA--GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
A+ + G+ I PFA+S LIA S + + ++ + N W G+ +S+
Sbjct: 74 AQMIINGL-ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESE 132
Query: 321 QCEAVFKLFREFRTTEAL--IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 378
+ F L+++ PD + CA SLG ++L+ +L +
Sbjct: 133 NPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSH 192
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+ +A + M++ CG++ A K F RD++ +N +I GY G KAI +++ M
Sbjct: 193 VHNASIHMFASCGDMENARKVFD--ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 439 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 498
+KPD +T + L+S+C G + G++F+ +KE+ + I ++DM+ + +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIH 309
Query: 499 KA 500
+A
Sbjct: 310 EA 311
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 40/303 (13%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD-GCDTVALDLFA 62
R SW +I Y + L +R LFD +D+V +N+M+ A G D AL LF
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD--ALALFQ 378
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
MQ++ DEIT+ L+ ++L + G +H Y+ K + L+ +SL+DMY+K
Sbjct: 379 EMQTS--NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CG+ EA +VF G + +++++ +I
Sbjct: 437 CGNISEALSVFHGI---------------------------------QTRNSLTYTAIIG 463
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
G +G A++ F EMI+ GI ++ T +LSAC ++ G+ + + +
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 243 NQFVSSGI-VDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDS 300
Q I VD + G + A+ + + +++ A +L+ G GN+ ++
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 583
Query: 301 LSE 303
L E
Sbjct: 584 LLE 586
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 275/524 (52%), Gaps = 45/524 (8%)
Query: 93 YGKQMHSYMVKTANDLSKFALSSLIDMYSKC---GSFREAYNVFSGCDGVVDLVS----K 145
+G+ +H ++V+ D + ++L++MY+K GS NVF D + S +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF---DEMPQRTSNSGDE 179
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
+ C +D VF P D VS+NT+IAGY Q+G E AL + EM +
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 206 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 265
+ + TL+SVL + + GK +H V++ S+ ++ S +VD Y K + +E
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE- 297
Query: 266 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 325
R+F L R+ + W +L +GYV++ +
Sbjct: 298 ------------------------------RVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 326 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 385
+LFR+ T + P + +V+ ACA ATL LGKQ H Y+LR + +ASALVD
Sbjct: 328 LRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 386 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 445
MYSKCGNI A K F + D + + +I G+A HG ++A+ LF+EM + +KP+
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDE--VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 446 ITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMR 505
+ FVA+L+AC H GLV+ +F SM + Y + E+ HYA + D+ GR +LE+A F+
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504
Query: 506 KIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNE 565
K+ ++ S+W L++C ++ N L ++ E++ V+++N YV + N+YA+ G+W E
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 566 MGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
M ++R MR K K P CSWI ++N H F SGD SH D I
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 326/646 (50%), Gaps = 47/646 (7%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT-VALD 59
M +R+ SW A+I AY + +++A +FD R SYN+M++A + CD A +
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMI-KNKCDLGKAYE 134
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
LF D + ++ TM+ + +R + + Y A + L+
Sbjct: 135 LFC------DIPEKNAVSYATMI--TGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSG 186
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y + G + EA VF G V ++VS ++MV C+ G++ A ++F + E N ++W
Sbjct: 187 YLRAGKWNEAVRVFQGM-AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN-VITWTA 244
Query: 180 LIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
+I GY + G+ E LF+ M ++G ++ N +TLA + AC + G +H LV +
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG-------------- 284
+ F+ + ++ Y K G M A++V+ + K + +SLI G
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 285 -----------------YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFK 327
+S KG ++K LF + E++ + WTA+ S +V + E
Sbjct: 365 EKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALC 424
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 387
F + E + P++ +VL A A A L G Q H +++ + D + ++LV MY
Sbjct: 425 WFHKMLQKE-VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMY 483
Query: 388 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
KCGN A K F + S+ +++ YN MI+GY+++GF KA++LF + +P+ +T
Sbjct: 484 CKCGNTNDAYKIFSCI--SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 448 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
F+ALLSAC H G V+LG K+F SMK YN+ P HYACMVD+ GR L+ A + +
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 508 PIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 567
P + + +WG+ L+A K + L + A ++L+++E D+ + YV L+ +Y+ GK +
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Query: 568 RIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
RI + K K PG SWI ++ +H F +GD S + I TL
Sbjct: 662 RIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTL 707
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 30/230 (13%)
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
+ + GN++ AE+++ + +S + ++I+ Y+ G M+KA ++FD + R + A+
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 314 SGYVKSQQCE--AVFKLFREFRTTEALIPDTMIIV-----------------------NV 348
+ +K+ +C+ ++LF + A+ TMI +V
Sbjct: 120 TAMIKN-KCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSV 178
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSD 407
+ L GK A + + + E ++ S++V Y K G I A F +T +
Sbjct: 179 ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT--E 236
Query: 408 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACR 456
R+VI + MI GY GF LF M + +K ++ T + ACR
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
F +S I+ ++ GN+ +A+ +F +S R+ V W A+ S Y ++ + +++F E
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR 110
Query: 336 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA-LVDMYSKCGNIA 394
+ MI + C LGK AY L + ++ A ++ + + G
Sbjct: 111 VTTSYNAMITAMIKNKC------DLGK---AYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 395 YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML---------------KI 439
AE + RD + NV+++GY G N+A+++FQ M K+
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 440 SLKPDA------------ITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
DA IT+ A++ G E G F+ M+++ +V A M
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 488 VD------MYGRGNQLEKAVEFMRKIPIQID 512
Y G+Q+ V ++P++ D
Sbjct: 282 FKACRDFVRYREGSQIHGLVS---RMPLEFD 309
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 307/618 (49%), Gaps = 84/618 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N + N +I Y K A +FDS R++VS+++++S + +G +L LF+ M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV-LNGDLKGSLSLFSEM 98
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
R I +E T +T L L + G Q+H + +K ++ +SL+DMYSKCG
Sbjct: 99 --GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 156
Query: 125 SFREAYNVFSGCDGVVD--LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
EA VF +VD L+S NAM IA
Sbjct: 157 RINEAEKVFR---RIVDRSLISWNAM--------------------------------IA 181
Query: 183 GYVQNGYMERALTLFIEMIEKGIEY--NQHTLASVLSACTGLKCLKLGKCVHALVLKND- 239
G+V GY +AL F M E I+ ++ TL S+L AC+ + GK +H ++++
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 240 GC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
C S+ ++ +VD Y KCG + A + I K+ + SSLI GY+ +G +A LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
L E N + D+ + +++G A A L
Sbjct: 302 KRLQELNSQI--------------------------------DSFALSSIIGVFADFALL 329
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF---QLVTDSDRDVILYNV 415
GKQ A ++ ++ + +++VDMY KCG + AEK F QL +DVI + V
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-----KDVISWTV 384
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
+I GY HG K++++F EML+ +++PD + ++A+LSAC H G+++ GE+ F + E +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
+ P + HYAC+VD+ GR +L++A + +PI+ + IW L+ C+++ + L K+
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
+ LL+++A N + YV ++N+Y G WNE G R+ K K G SW+ +E +H
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHF 564
Query: 596 FTSGDTSHSKADAIYSTL 613
F SG+ SH I TL
Sbjct: 565 FRSGEDSHPLTPVIQETL 582
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 223/510 (43%), Gaps = 113/510 (22%)
Query: 78 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 137
L ++L + + + G Q+H Y++K+ + L+ + LIDMY KC RE
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKC---REPL------- 58
Query: 138 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
MA VF PE N VSW+ L++G+V NG ++ +L+LF
Sbjct: 59 ----------------------MAYKVFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLF 95
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
EM +GI N+ T ++ L AC L L+ G +H LK V + +VD Y KC
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
G + AE V+ I +S + +++IAG+ G +KA F + E N +
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN-----------I 204
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
K + PD + ++L AC+ + GKQ H +++R+ +
Sbjct: 205 KER-------------------PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 378 K--LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 435
+ +LVD+Y KCG + A K+F + ++ +I ++ +I GYA G +A+ LF+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 436 MLKISLKPDAITF---------VALLSACRHR--------------------------GL 460
+ +++ + D+ ALL + GL
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 461 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWG 517
V+ EK F M+ L ++ + ++ YG+ +K+V M + I+ D +
Sbjct: 364 VDEAEKCFAEMQ-----LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 518 AFLNACKINNNTTLVKQAEEELLKVEADNG 547
A L+AC +++ ++K+ EE K+ +G
Sbjct: 419 AVLSAC---SHSGMIKEGEELFSKLLETHG 445
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 263/456 (57%), Gaps = 15/456 (3%)
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
NG ++A L+++++ I N+ T +S+L +C+ K GK +H VLK + +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYV 163
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
++G+VD Y K G++ A+ V+ + +S +++++I Y+ +GN+ A+ LFDS+ ER+
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V W + GY + LF++ PD + +V L AC+ L G+ H
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-DVILYNVMIAGYAHHGF 425
++ +++ ++ K+ + L+DMYSKCG++ E++ + D+ R D++ +N MIAGYA HG+
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSL---EEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 426 ENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
A++LF EM I+ L+P ITF+ L AC H GLV G + F SM ++Y + P+I HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
C+V + GR QL++A E ++ + + D+ +W + L +CK++ + L K+ E L+ +
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
N YV L+N+YA+ G + + ++R M+ K K PG S I +EN +H F +GD HS
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 605 KADAIYSTL------VCLYGKLYLTFTELKQLDEIQ 634
K+ IY+ L + +G + T T L+ L+E +
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 12/289 (4%)
Query: 15 AYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMD 74
AY + + ALF DL + + ++ A +G A L+ ++ S+ I +
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSE--INPN 129
Query: 75 EITLTTML-NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
E T +++L + S K GK +H++++K + + + L+D+Y+K G A VF
Sbjct: 130 EFTFSSLLKSCSTK-----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 134 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 193
LVS AM+ + G ++ A +F E D VSWN +I GY Q+G+ A
Sbjct: 185 DRMPER-SLVSSTAMITCYAKQGNVEAARALFDSMCE-RDIVSWNVMIDGYAQHGFPNDA 242
Query: 194 LTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
L LF +++ +G + ++ T+ + LSAC+ + L+ G+ +H V + N V +G++D
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 253 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
Y KCG++ A V+ K A +++IAGY+ G A RLF+ +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 102/220 (46%), Gaps = 36/220 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ S A+I Y K N+ ARALFDS RD+VS+N M+ YA G AL L
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA-QHGFPNDALML 245
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F ++ A DEIT+ L+ +++ + G+ +H ++ + L+ + LIDMY
Sbjct: 246 FQKLL-AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCGS EA VF+ D+V+ NAM
Sbjct: 305 SKCGSLEEAVLVFNDTPR-KDIVAWNAM-------------------------------- 331
Query: 181 IAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSAC 219
IAGY +GY + AL LF EM G++ T L AC
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/617 (31%), Positives = 296/617 (47%), Gaps = 72/617 (11%)
Query: 6 AFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ 65
F N +I Y K + AR + R++VS+ S++S A +G + AL F M+
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA-QNGHFSTALVEFFEMR 100
Query: 66 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 125
R+ + ++ T A LR+ GKQ+H+ VK L F S DMY
Sbjct: 101 --REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY----- 153
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 185
C+ D A +F + PE N +WN I+ V
Sbjct: 154 ---------------------------CKTRLRDDARKLFDEIPERN-LETWNAFISNSV 185
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
+G A+ FIE N T + L+AC+ L LG +H LVL++ ++
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
V +G++DFY KC +R +E ++ +G K N
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTK-------------------------------N 274
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V W +L + YV++ + E L+ R D MI +VL ACA A L LG+ H
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI-SSVLSACAGMAGLELGRSIH 333
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
A+ ++ + + SALVDMY KCG I +E++F + + ++++ N +I GYAH G
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE--KNLVTRNSLIGGYAHQGQ 391
Query: 426 ENKAIQLFQEMLK--ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
+ A+ LF+EM P+ +TFV+LLSAC G VE G K F SM+ Y + P H
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEH 451
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
Y+C+VDM GR +E+A EF++K+PIQ S+WGA NAC+++ L A E L K++
Sbjct: 452 YSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLD 511
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
+ +V L+N +AA G+W E +R+E++G K G SWI V+N +H F + D SH
Sbjct: 512 PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
Query: 604 SKADAIYSTLVCLYGKL 620
I +TL L ++
Sbjct: 572 ILNKEIQTTLAKLRNEM 588
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 208/685 (30%), Positives = 326/685 (47%), Gaps = 116/685 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MPH+N S N +I ++K +++ AR LFD+ R +V++ ++ YA D A L
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDE-AFKL 132
Query: 61 FARMQSARDTIGMDEITLTTML---NLSAKLRVVCYGKQMHSYMVKTANDLSKF------ 111
F +M + D +T TT+L N + V Q+H++ VK D + F
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV---GQVHAFAVKLGFDTNPFLTVSNV 189
Query: 112 ---------------------------ALSSLIDMYSKCGSFREAYNVF-----SG---- 135
++LI Y K G + E+ ++F SG
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 136 ---CDGVVDLV---------------------SKNAMVAACCRD--GKMDMALN---VFW 166
GV+ V S++A V D K D L +F
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 167 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 226
+ PE D VS+N +I+ Y Q E +L F EM G + A++LS L L+
Sbjct: 310 EMPEL-DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
+G+ +H L S V + +VD Y KC AE +
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI-------------------- 408
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
F SL +R V WTAL SGYV+ A KLF + R + L D
Sbjct: 409 -----------FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFA 456
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTD 405
VL A A A+L LGKQ HA+I+R+ N++ + S LVDMY+KCG+I A + F+ +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEM-- 513
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
DR+ + +N +I+ +A +G AI F +M++ L+PD+++ + +L+AC H G VE G
Sbjct: 514 PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 466 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKI 525
++F +M Y + P+ HYACM+D+ GR + +A + M ++P + D +W + LNAC+I
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633
Query: 526 NNNTTLVKQAEEELLKVEA-DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGC 584
+ N +L ++A E+L +E + + YV ++N+YAA G+W ++ ++K MR + K+P
Sbjct: 634 HKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAY 693
Query: 585 SWIYVENGIHVFTSGDTSHSKADAI 609
SW+ V + IHVF+S D +H D I
Sbjct: 694 SWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
D C + F IV+ + G + A VY + K+ +T+++I+G+ G+++ A+ LF
Sbjct: 47 DTCRSNF----IVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLF 102
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF-RTTEALIPDTMIIVNVLGACAIQAT 357
D++ +R V WT L Y ++ + FKLFR+ R++ +PD + +L C
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVP 162
Query: 358 LSLGKQTHAYILRTKLNMDEKL--ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+ Q HA+ ++ + + L ++ L+ Y + + A F+ + ++D + +N
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI--PEKDSVTFNT 220
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF-------- 467
+I GY G ++I LF +M + +P TF +L A LG++
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 468 -------------FMSMKED--------YNVLPEI--YHYACMVDMYGRGNQLEKAVEFM 504
F S K D ++ +PE+ Y ++ Y + +Q E ++ F
Sbjct: 281 FSRDASVGNQILDFYS-KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 505 RKI 507
R++
Sbjct: 340 REM 342
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 278/539 (51%), Gaps = 68/539 (12%)
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I D T+L +++ G+ +H++++++ ++L++MY+KCGS EA
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
VF K P+ D V+W TLI+GY Q+
Sbjct: 116 K--------------------------------VFEKMPQ-RDFVTWTTLISGYSQHDRP 142
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
AL F +M+ G N+ TL+SV+ A + G C H L
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER---RGCCGHQLH--------------- 184
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
F KCG + +V+ G S+L+ Y+ G M A+ +FD+L RN V W
Sbjct: 185 -GFCVKCG---FDSNVHVG---------SALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
AL +G+ + E +LF+ + P ++ GAC+ L GK HAY+++
Sbjct: 232 ALIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
+ + + L+DMY+K G+I A K F + + RDV+ +N ++ YA HGF +A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
F+EM ++ ++P+ I+F+++L+AC H GL++ G ++ MK+D ++PE +HY +VD+
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 550
GR L +A+ F+ ++PI+ A+IW A LNAC+++ NT L A E + +++ D+ +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 551 VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
V L N+YA+ G+WN+ R+RK+M+ K P CSW+ +EN IH+F + D H + + I
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 205/503 (40%), Gaps = 116/503 (23%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD-GCDTVALDLFARMQSAR 68
N ++ Y K +L +AR +F+ RD V++ +++S Y+ D CD AL F +M R
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD--ALLFFNQM--LR 154
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
+E TL++++ +A R C G Q+H + VK D + S+L+D+Y++ G +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A VF + D VS NA++ AG+ +
Sbjct: 215 AQLVFDALESRND-VSWNALI--------------------------------AGHARRS 241
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
E+AL LF M+ G + + AS+ AC+ L+ GK VHA ++K+ F +
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++D Y K G++ A +++FD L++R+ V
Sbjct: 302 TLLDMYAKSGSIHDA-------------------------------RKIFDRLAKRDVVS 330
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W +L + Y + + F E R + P+ + ++VL AC+ L G + +
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
+ + + +VD+ + G++ N+
Sbjct: 390 KKDGIVPEAWHYVTVVDLLGRAGDL---------------------------------NR 416
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG----EKFFMSMKEDYNVLPEIYHY 484
A++ +EM ++P A + ALL+ACR ELG E F +D P + Y
Sbjct: 417 ALRFIEEM---PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG--PHVILY 471
Query: 485 ACMVDMYGRGNQLEKAVEFMRKI 507
++Y G + A +K+
Sbjct: 472 ----NIYASGGRWNDAARVRKKM 490
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 282/550 (51%), Gaps = 36/550 (6%)
Query: 73 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 132
+D+ + +L +K+ + G ++H K A F + +DMY+ CG A NV
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 133 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 192
F D +S D V+WNT+I Y + G ++
Sbjct: 169 F-------DEMSHR--------------------------DVVTWNTMIERYCRFGLVDE 195
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
A LF EM + + ++ L +++SAC ++ + ++ +++ND + + + +V
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 253 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
Y G M A + + +++ F ++++++GYS G + A+ +FD +++ V WT +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
S YV+S + ++F E + PD + + +V+ ACA L K H+ I
Sbjct: 316 ISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
L + + +AL++MY+KCG + F+ + R+V+ ++ MI + HG + A+ L
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKM--PRRNVVSWSSMINALSMHGEASDALSL 432
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F M + +++P+ +TFV +L C H GLVE G+K F SM ++YN+ P++ HY CMVD++G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
R N L +A+E + +P+ + IWG+ ++AC+I+ L K A + +L++E D+ V
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 612
++N+YA E +W ++ IR+ M K K G S I H F GD H +++ IY+
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 613 LVCLYGKLYL 622
L + KL L
Sbjct: 613 LDEVVSKLKL 622
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 203/475 (42%), Gaps = 75/475 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F + Y + AR +FD SHRD+V++N+M+ Y D A LF M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE-AFKLFEEM 203
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + + DE+ L +++ + + Y + ++ ++++ + L++L+ MY+ G
Sbjct: 204 KDS--NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A F V +L AMV+ + G++D A V + E D V W T+I+ Y
Sbjct: 262 CMDMAREFFRKM-SVRNLFVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLVCWTTMISAY 319
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
V++ Y + AL +F EM GI+ + ++ SV+SAC L L K VH+ + N S
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+++ +++ Y KCG + V+ + ++ + SS+I S G + A LF + +
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N + P+ + V VL C+ + GK
Sbjct: 440 N--------------------------------VEPNEVTFVGVLYGCSHSGLVEEGK-- 465
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
K+ +++ D Y+ + + Y M+ +
Sbjct: 466 -------------KIFASMTDEYNITPKLEH-----------------YGCMVDLFGRAN 495
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE---KFFMSMKEDYN 476
+A+++ + M + + + + +L+SACR G +ELG+ K + ++ D++
Sbjct: 496 LLREALEVIESM---PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 169/402 (42%), Gaps = 69/402 (17%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSAC 219
ALNVF P +++ +N + ++ RA LF + I G +Q + +L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 220 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 279
+ + L G +H + K + FV +G +D Y CG + YA +V
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV------------- 168
Query: 280 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALI 339
FD +S R+ V W + Y + + FKLF E + + ++
Sbjct: 169 ------------------FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN-VM 209
Query: 340 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM------------- 386
PD MI+ N++ AC + + + +++ + MD L +ALV M
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 387 ------------------YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
YSKCG + A+ F +D++ + MI+ Y + +
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD--QTEKKDLVCWTTMISAYVESDYPQE 327
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
A+++F+EM +KPD ++ +++SAC + G+++ K+ S + E+ ++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALI 386
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
+MY + L+ + K+P + S W + +NA ++ +
Sbjct: 387 NMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGEAS 427
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M RN F A++ Y K L A+ +FD +DLV + +M+SAY +D AL +
Sbjct: 273 MSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE-ALRV 331
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M + I D +++ ++++ A L ++ K +HS + + ++LI+MY
Sbjct: 332 FEEMCCS--GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG +D +VF K P N VSW+++
Sbjct: 390 AKCGG--------------------------------LDATRDVFEKMPRRN-VVSWSSM 416
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I +G AL+LF M ++ +E N+ T VL C+ ++ GK + A +
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
+ + G +VD + + +R A V + P A++ +I G
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESM----PVASNVVIWG 517
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/607 (29%), Positives = 298/607 (49%), Gaps = 74/607 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I +Y+K + A LF+ +++++S+ ++LS Y + A++LF M ++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK-QNALHKEAMELFTSM--SKF 344
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D +++L A L + +G Q+H+Y +K + +SLIDMY+KC +A
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF + AA D V +N +I GY + G
Sbjct: 405 RKVF------------DIFAAA---------------------DVVLFNAMIEGYSRLGT 431
Query: 190 ---MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
+ AL +F +M + I + T S+L A L L L K +H L+ K + F
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
S ++D Y C ++ ++ +FD + ++
Sbjct: 492 GSALIDVYSNCYCLK-------------------------------DSRLVFDEMKVKDL 520
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V+W ++ +GYV+ + E LF E + + PD N++ A A++ LG++ H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRER-PDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+L+ L + + +AL+DMY+KCG+ A K+F + + RDV+ +N +I+ YA+HG
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD--SAASRDVVCWNSVISSYANHGEG 637
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
KA+Q+ ++M+ ++P+ ITFV +LSAC H GLVE G K F M + + PE HY C
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVC 696
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
MV + GR +L KA E + K+P + A +W + L+ C N L + A E + + +
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 606
+ L+N+YA++G W E ++R+ M+ + K PG SWI + +H+F S D SH KA
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKA 816
Query: 607 DAIYSTL 613
+ IY L
Sbjct: 817 NQIYEVL 823
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 233/503 (46%), Gaps = 80/503 (15%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ + +I Y+K N+ AR +FD+ + V++ +M+S G V+L LF
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQLF-- 237
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
Q D + D L+T+L+ + L + GKQ+H+++++ ++ ++ LID Y KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G A+ +F+G + +KN +SW TL++G
Sbjct: 298 GRVIAAHKLFNG------MPNKN---------------------------IISWTTLLSG 324
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Y QN + A+ LF M + G++ + + +S+L++C L L G VHA +K + ++
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+V++ ++D Y KC +T A+++FD +
Sbjct: 385 SYVTNSLIDMYAKC-------------------------------DCLTDARKVFDIFAA 413
Query: 304 RNYVVWTALCSGYVK---SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ V++ A+ GY + + +FR+ R + P + V++L A A +L L
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIA 418
KQ H + + LN+D SAL+D+YS C Y K +LV D +D++++N M A
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNC----YCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS-MKEDYNV 477
GY +A+ LF E+ +PD TF +++A + V+LG++F +K
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 478 LPEIYHYACMVDMYGRGNQLEKA 500
P I + ++DMY + E A
Sbjct: 589 NPYITN--ALLDMYAKCGSPEDA 609
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 227/490 (46%), Gaps = 81/490 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I Y +A + AR +F+ R+LVS+++M+SA G +L +F R
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA-CNHHGIYEESLVVFLEFWRTRK 141
Query: 70 TIGMDEITLTTMLN----LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 125
+E L++ + L + R + + Q+ S++VK+ D + + LID Y K
Sbjct: 142 D-SPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLK--- 195
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 185
DG +D A VF PE TV+W T+I+G V
Sbjct: 196 -----------------------------DGNIDYARLVFDALPE-KSTVTWTTMISGCV 225
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
+ G +L LF +++E + + + L++VLSAC+ L L+ GK +HA +L+ +
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
+ + ++D Y KCG + A +LF+ + +N
Sbjct: 286 LMNVLIDSYVKCGRV-------------------------------IAAHKLFNGMPNKN 314
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
+ WT L SGY ++ + +LF + L PD ++L +CA L G Q H
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
AY ++ L D + ++L+DMY+KC + A K F + + DV+L+N MI GY+ G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGT 431
Query: 426 E---NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLPEI 481
+ ++A+ +F++M ++P +TFV+LL A L LG K + Y + +I
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 482 YHYACMVDMY 491
+ + ++D+Y
Sbjct: 490 FAGSALIDVY 499
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 34/317 (10%)
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
+D N ++ R G M A VF K PE N VSW+T+++ +G E +L +F+E
Sbjct: 77 LDTYLSNILINLYSRAGGMVYARKVFEKMPERN-LVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 200 MIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
+ N++ L+S + AC+GL DG +++ + F K G
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGL----------------DG-RGRWMVFQLQSFLVKSG 178
Query: 259 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK 318
+ VY G + LI Y GN+ A+ +FD+L E++ V WT + SG VK
Sbjct: 179 ---FDRDVYVG---------TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 319 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 378
+ +LF + + ++PD I+ VL AC+I L GKQ HA+ILR L MD
Sbjct: 227 MGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
L + L+D Y KCG + A K F + ++++I + +++GY + +A++LF M K
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGM--PNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 439 ISLKPDAITFVALLSAC 455
LKPD ++L++C
Sbjct: 344 FGLKPDMYACSSILTSC 360
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 195/465 (41%), Gaps = 109/465 (23%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA--GADGCDTVALDLF- 61
+++ N++I Y K LT AR +FD + D+V +N+M+ Y+ G AL++F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 62 -ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
R + R ++ +T ++L SA L + KQ+H M K +L FA S+LID+Y
Sbjct: 444 DMRFRLIRPSL----LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
S C C +D ++ VF + D V WN++
Sbjct: 500 SNC---------------------------YCLKDSRL-----VF-DEMKVKDLVIWNSM 526
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
AGYVQ E AL LF+E+ ++ T A++++A L ++LG+ H +LK
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
N ++++ ++D Y KCG SP A + FDS
Sbjct: 587 ECNPYITNALLDMYAKCG---------------SP----------------EDAHKAFDS 615
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ R+ V W ++ S Y + + ++ + +E + P+ + V VL AC+ +
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKM-MSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
G + +LR + + + +V + + G +
Sbjct: 675 GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRL--------------------------- 707
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
NKA +L ++M KP AI + +LLS C G VEL E
Sbjct: 708 ------NKARELIEKM---PTKPAAIVWRSLLSGCAKAGNVELAE 743
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H I+ L +D L++ L+++YS+ G + YA K F+ + +R+++ ++ M++ HH
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM--PERNLVSWSTMVSACNHH 123
Query: 424 GFENKAIQLFQEMLKISL-KPDAITFVALLSAC-----RHRGLVELGEKFFMSMKEDYNV 477
G +++ +F E + P+ + + AC R R +V + F + D +V
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNAC 523
Y ++D Y + ++ A +P + W ++ C
Sbjct: 184 ----YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 184/682 (26%), Positives = 325/682 (47%), Gaps = 109/682 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N I+ Y K +L AR +FD R+LVSY S+++ Y+ +G A+ L+ +M ++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS-QNGQGAEAIRLYLKM--LQE 162
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D+ +++ A V GKQ+H+ ++K
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL------------------------- 197
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+ L+++NA++A R +M A VF+ P D +SW+++IAG+ Q G+
Sbjct: 198 -------ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGF 249
Query: 190 MERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
AL+ EM+ G+ + N++ S L AC+ L G +H L +K++ N
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF---------- 298
+ D Y +CG + A V+ I + + +IAG ++ G +A +F
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 299 DSLSER-------------------NYVV-W---------TALCSGYVKSQQCEAVFKLF 329
D++S R +Y++ W +L + Y F LF
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 330 REFRTTEALI-------------------------------PDTMIIVNVLGACAIQATL 358
+FR + PD + + N+L C ++L
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
LG Q H Y L+T L ++ + + L+DMY+KCG++ A + F + +RDV+ ++ +I
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNRDVVSWSTLIV 547
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
GYA GF +A+ LF+EM ++P+ +TFV +L+AC H GLVE G K + +M+ ++ +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
P H +C+VD+ R +L +A F+ ++ ++ D +W L+ACK N L ++A E
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 539 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 598
+LK++ N + +V L +++A+ G W +R M+ + K+PG SWI +E+ IH+F +
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Query: 599 GDTSHSKADAIYSTLVCLYGKL 620
D H + D IY+ L ++ ++
Sbjct: 728 EDIFHPERDDIYTVLHNIWSQM 749
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 164/366 (44%), Gaps = 66/366 (18%)
Query: 89 RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAM 148
R + G+++H +++ + + ++ MY KCGS R+A VF D +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVF-------DFM----- 128
Query: 149 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYN 208
PE N VS+ ++I GY QNG A+ L+++M+++ + +
Sbjct: 129 --------------------PERN-LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 209 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
Q S++ AC + LGK +HA V+K + S+ + ++ Y + M A V+
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
GI +K + SS+IAG+S G F++LS
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFE------FEALSH------------------------- 256
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
+E + P+ I + L AC+ G Q H ++++L + +L DMY+
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 448
+CG + A + F + D +NV+IAG A++G+ ++A+ +F +M PDAI+
Sbjct: 317 RCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 449 VALLSA 454
+LL A
Sbjct: 375 RSLLCA 380
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 187/464 (40%), Gaps = 106/464 (22%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
NA + ++ Y + L AR +FD D S+N +++ A +G A+ +F++M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN-NGYADEAVSVFSQM 362
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+S+ D I+L ++L K + G Q+HSY++K +SL+ MY+ C
Sbjct: 363 RSS--GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+N+F D VS WNT++
Sbjct: 421 DLYCCFNLFEDFRNNADSVS--------------------------------WNTILTAC 448
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+Q+ L LF M+ E + T+ ++L C + LKLG VH LK Q
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
F+ +G++D Y KCG++ A ++ + + + S+LI GY+ G F
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG--------FG----- 555
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
E LF+E ++ + P+ + V VL AC+ + G +
Sbjct: 556 ------------------EEALILFKEMKSA-GIEPNHVTFVGVLTACSHVGLVEEGLKL 596
Query: 365 HAYILRTK--LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
+A ++T+ ++ ++ S +VD+ ++ G + AE+
Sbjct: 597 YA-TMQTEHGISPTKEHCSCVVDLLARAGRLNEAER------------------------ 631
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
EM L+PD + + LLSAC+ +G V L +K
Sbjct: 632 ---------FIDEM---KLEPDVVVWKTLLSACKTQGNVHLAQK 663
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 35/246 (14%)
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
T S++ AC+ + L G+ +H +L ++ + +++ I+ Y KCG++R A V+ +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 271 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 330
++ + +S+I GYS G +A RL Y+K Q
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRL------------------YLKMLQ--------- 161
Query: 331 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
E L+PD +++ ACA + + LGKQ HA +++ + + +AL+ MY +
Sbjct: 162 -----EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL-KPDAITFV 449
++ A + F + +D+I ++ +IAG++ GFE +A+ +EML + P+ F
Sbjct: 217 NQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 450 ALLSAC 455
+ L AC
Sbjct: 275 SSLKAC 280
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
++++ AC+ +L+ G++ H +IL + D L + ++ MY KCG++ A + F + +
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
R+++ Y +I GY+ +G +AI+L+ +ML+ L PD F +++ AC V LG+
Sbjct: 131 --RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 466 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+ + + + I A ++ MY R NQ+ A IP++ D W + +
Sbjct: 189 QLHAQVIKLESSSHLIAQNA-LIAMYVRFNQMSDASRVFYGIPMK-DLISWSSII 241
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 304/615 (49%), Gaps = 57/615 (9%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
SWN+++ Y AR LFD R+++S+N ++S Y D A +F M
Sbjct: 50 SWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDE-ARKVFDLMPE- 107
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R+ + + + N + + K V L F ID K
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL---- 163
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
Y + D + ++ +M+ C++G++D A +F + E ++W T++ GY QN
Sbjct: 164 --YEMIPDKDNI----ARTSMIHGLCKEGRVDEAREIFDEMSE-RSVITWTTMVTGYGQN 216
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
++ A +F M EK T S S G
Sbjct: 217 NRVDDARKIFDVMPEK-------TEVSWTSMLMG-------------------------- 243
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
Y + G + AE ++ + +K A +++I+G KG + KA+R+FDS+ ERN
Sbjct: 244 ------YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
W + + ++ LF + + P ++++L CA A+L GKQ HA
Sbjct: 298 SWQTVIKIHERNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
++R + ++D +AS L+ MY KCG + ++ F +D+I++N +I+GYA HG
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF--PSKDIIMWNSIISGYASHGLGE 414
Query: 428 KAIQLFQEM-LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
+A+++F EM L S KP+ +TFVA LSAC + G+VE G K + SM+ + V P HYAC
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC 474
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
MVDM GR + +A+E + + ++ DA++WG+ L AC+ ++ + + ++L+++E +N
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD-TSHSK 605
Y+ L+N+YA++G+W ++ +RK M+ + K PGCSW VEN +H FT G SH +
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 606 ADAIYSTLVCLYGKL 620
++I L L G L
Sbjct: 595 QESILKILDELDGLL 609
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 206/517 (39%), Gaps = 121/517 (23%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN SWN ++ Y+K + +AR +FD R++VS+ +++ Y D VA L
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVD-VAESL 132
Query: 61 FARMQSARDT------IGM-------------------DEITLTTMLN------------ 83
F +M IG D I T+M++
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 84 -----------LSAKLRVVCYGKQMHSYMVKTANDL----SKFALSSLIDMYSKCGSFRE 128
++ V YG+ + D+ ++ + +S++ Y + G +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A +F V +++ NAM++ + G++ A VF E ND SW T+I + +NG
Sbjct: 253 AEELFE-VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHERNG 310
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ AL LFI M ++G+ TL S+LS C L L GK VHA +++ + +V+S
Sbjct: 311 FELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y KCG + ++ ++ K +S+I+GY+S G
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG------------------- 411
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
E K+F E + + P+ + V L AC ++A +
Sbjct: 412 ------------LGEEALKVFCEMPLSGSTKPNEVTFVATLSAC-----------SYAGM 448
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
+ L + E + S + +T Y M+ G N+
Sbjct: 449 VEEGLKIYESMESVF---------------GVKPITAH------YACMVDMLGRAGRFNE 487
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
A+++ M +++PDA + +LL ACR +++ E
Sbjct: 488 AMEMIDSM---TVEPDAAVWGSLLGACRTHSQLDVAE 521
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 29/294 (9%)
Query: 226 KLGKCVHALVLKNDGCSNQFVSS--GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIA 283
++GK +H D C ++ +SS +V Y R A ++ + ++ + + L++
Sbjct: 29 RIGK-IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 284 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 343
GY G + +A+++FD + ERN V WTAL GYV + + + LF + + M
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVM 147
Query: 344 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQL 402
+I L G+ A L + + +A ++++ K G + A + F
Sbjct: 148 LI----------GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ S+R VI + M+ GY + + A ++F M + + +++ ++L G +E
Sbjct: 198 M--SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIE 251
Query: 463 LGEKFFMSMKEDYNVLPEIYHYAC--MVDMYGRGNQLEKAVEFMRKIPIQIDAS 514
E+ F V+P AC M+ G+ ++ KA + + DAS
Sbjct: 252 DAEELF-------EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 287/589 (48%), Gaps = 69/589 (11%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
++T AR +FD + +N+++ Y+ + AL +++ MQ AR + D T
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQD-ALLMYSNMQLAR--VSPDSFTFPH 124
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+L + L + G+ +H+ + + D F + LI +Y+KC A VF G
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL---- 180
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
PE VSW +++ Y QNG AL +F +M
Sbjct: 181 --------------------------PLPE-RTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ ++ + L SVL+A T L+ LK G+ +HA V+K
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK----------------------- 250
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
G+ I+ P SL Y+ G + AK LFD + N ++W A+ SGY K+
Sbjct: 251 -------MGLEIE-PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+F E + + PDT+ I + + ACA +L + + Y+ R+ D ++
Sbjct: 303 YAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
SAL+DM++KCG++ A F D RDV++++ MI GY HG +AI L++ M +
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+ P+ +TF+ LL AC H G+V G FF M D+ + P+ HYAC++D+ GR L++A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 501 VEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 560
E ++ +P+Q ++WGA L+ACK + + L + A ++L ++ N YVQL+N+YAA
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 561 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
W+ + +R M+ K K GCSW+ V + F GD SH + + I
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 211/501 (42%), Gaps = 110/501 (21%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFD--SASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
+ F N +I Y K L AR +F+ R +VS+ +++SAYA +G AL++F+
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA-QNGEPMEALEIFS 211
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
+M+ + + D + L ++LN L+ + G+ +H+ +VK ++ L SL MY+K
Sbjct: 212 QMR--KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CG A +F KM K+P + WN +I+
Sbjct: 270 CGQVATAKILFD----------------------KM--------KSPNL---ILWNAMIS 296
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY +NGY A+ +F EMI K + + ++ S +SAC + L+ + ++ V ++D
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ F+SS ++D + KCG++ A+ +FD
Sbjct: 357 DVFISSALIDMFAKCGSVE-------------------------------GARLVFDRTL 385
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+R+ VVW+A+ GY + L+R + P+ + + +L AC + G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
+ K+N ++ + ++D+ + G++
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLD---------------------------- 476
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE-I 481
Q ++ + + ++P + ALLSAC+ VELGE + ++ +++ P
Sbjct: 477 --------QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGE---YAAQQLFSIDPSNT 525
Query: 482 YHYACMVDMYGRGNQLEKAVE 502
HY + ++Y ++ E
Sbjct: 526 GHYVQLSNLYAAARLWDRVAE 546
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK-SPFATSSLIAGYSSKGNM 291
L+ N G + + ++D ++ + +G++ S F + LI SS G++
Sbjct: 10 PLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
T A+++FD L W A+ GY ++ + ++ + + PD+ ++L A
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKA 128
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
C+ + L +G+ HA + R + D + + L+ +Y+KC + A F+ + +R ++
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
+ +++ YA +G +A+++F +M K+ +KPD + V++L+A
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 265/486 (54%), Gaps = 19/486 (3%)
Query: 164 VFWKNPEFN------DTVSWNTLIAGYVQN---GYMERALTLFIEMIEKGIEYNQHTLAS 214
+ + NP F+ ++ WN +I V N +++++ M + + HT
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
+L + L LG+ HA +L + FV + +++ Y CG++R A+ V+ G K
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF-- 332
A +S++ Y+ G + A++LFD + ERN + W+ L +GYV + + LFRE
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 333 -RTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
+ EA + P+ + VL AC L GK HAYI + + +D L +AL+DMY+KC
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFV 449
G++ A++ F + S +DV Y+ MI A +G ++ QLF EM ++ P+++TFV
Sbjct: 248 GSLERAKRVFNAL-GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 450 ALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI 509
+L AC HRGL+ G+ +F M E++ + P I HY CMVD+YGR +++A F+ +P+
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 510 QIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRI 569
+ D IWG+ L+ ++ + + A + L++++ N YV L+NVYA G+W E+ I
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 570 RKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL----YLTFT 625
R EM K K+PGCS++ VE +H F GD S +++ IY+ L + +L Y+T T
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT 486
Query: 626 ELKQLD 631
+ LD
Sbjct: 487 KEVLLD 492
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 43/370 (11%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
+ ++ RM++ R + D T +L + G++ H+ ++ D F +SL
Sbjct: 46 PISVYLRMRNHR--VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSL 103
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
++MYS CG R A VF G DL + N++V A + G +D A +F + PE N +S
Sbjct: 104 LNMYSSCGDLRSAQRVFDD-SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN-VIS 161
Query: 177 WNTLIAGYVQNGYMERALTLFIEMI-----EKGIEYNQHTLASVLSACTGLKCLKLGKCV 231
W+ LI GYV G + AL LF EM E + N+ T+++VLSAC L L+ GK V
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 232 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
HA + K + + + ++D Y KCG++
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLE------------------------------ 251
Query: 292 TKAKRLFDSL-SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
+AKR+F++L S+++ ++A+ + F+LF E T++ + P+++ V +LG
Sbjct: 252 -RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 351 ACAIQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 409
AC + ++ GK ++ + + +VD+Y + G I AE SF + D
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE-SFIASMPMEPD 369
Query: 410 VILYNVMIAG 419
V+++ +++G
Sbjct: 370 VLIWGSLLSG 379
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 44/322 (13%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
+WN+++ AY KA + AR LFD R+++S++ +++ Y G ALDLF MQ
Sbjct: 130 AWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMC-GKYKEALDLFREMQLP 188
Query: 68 RDT---IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + +E T++T+L+ +L + GK +H+Y+ K ++ ++LIDMY+KCG
Sbjct: 189 KPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCG 248
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S A VF+ D+ + +AM+ CC +A Y
Sbjct: 249 SLERAKRVFNALGSKKDVKAYSAMI--CC---------------------------LAMY 279
Query: 185 VQNGYMERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
G + LF EM I N T +L AC + GK ++++ G +
Sbjct: 280 ---GLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 244 QFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKA----KRL 297
G +VD Y + G ++ AES A + ++ SL++G G++ KRL
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 298 FDSLSERNYVVWTALCSGYVKS 319
+ L N + L + Y K+
Sbjct: 397 IE-LDPMNSGAYVLLSNVYAKT 417
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 300/621 (48%), Gaps = 79/621 (12%)
Query: 6 AFSWN-----AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
F W+ ++I Y + + AR LFD RD+ S+N+M+S Y + G AL L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS-GNAKEALTL 238
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+++ MD +T+ ++L+ + G +HSY +K + F + LID+Y
Sbjct: 239 SNGLRA------MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++ G R+ VF +M + D +SWN++
Sbjct: 293 AEFGRLRDCQKVFD----------------------RMYV-----------RDLISWNSI 319
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I Y N RA++LF EM I+ + TL S+ S + L ++ + V L+
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+ E + G ++++ Y+ G + A+ +F+
Sbjct: 380 ---------------------FLEDITIG---------NAVVVMYAKLGLVDSARAVFNW 409
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
L + + W + SGY ++ +++ + + V+VL AC+ L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-DVILYNVMIAG 419
G + H +L+ L +D + ++L DMY KCG + E + L R + + +N +IA
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL---EDALSLFYQIPRVNSVPWNTLIAC 526
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
+ HG KA+ LF+EML +KPD ITFV LLSAC H GLV+ G+ F M+ DY + P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEEL 539
+ HY CMVDMYGR QLE A++F++ + +Q DASIWGA L+AC+++ N L K A E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 540 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 599
+VE ++ +V L+N+YA+ GKW + IR GK K PG S + V+N + VF +G
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 600 DTSHSKADAIYSTLVCLYGKL 620
+ +H + +Y L L KL
Sbjct: 707 NQTHPMYEEMYRELTALQAKL 727
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 221/506 (43%), Gaps = 83/506 (16%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
N+ AR FD +RD+ ++N M+S Y A V M S+ T D T +
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT--PDYRTFPS 158
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+L R V G ++H +K + +SLI +YS+ + A +F V
Sbjct: 159 VLK---ACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP-VR 214
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
D+ S NAM I+GY Q+G + ALTL
Sbjct: 215 DMGSWNAM--------------------------------ISGYCQSGNAKEALTL---- 238
Query: 201 IEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
G+ + T+ S+LSACT G +H+ +K+ S FVS+ ++D Y + G
Sbjct: 239 -SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+R +++FD + R+ + W ++ Y +
Sbjct: 298 LR-------------------------------DCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE-K 378
+Q LF+E R + + PD + ++++ + + + + LR +++
Sbjct: 327 EQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+ +A+V MY+K G + A F + ++ DVI +N +I+GYA +GF ++AI+++ M +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNT--DVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 439 I-SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ + T+V++L AC G + G K + ++ + +++ + DMYG+ +L
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRL 502
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNAC 523
E A+ +IP ++++ W + AC
Sbjct: 503 EDALSLFYQIP-RVNSVPWNTLI-AC 526
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 257 CGNMRYAESVYAGI----GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
C N++ A+ ++A + I++ ++ L+ Y GN+ A+ FD + R+ W +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
SGY ++ V + F F + L PD +VL AC T+ G + H L+
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFG 180
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
D +A++L+ +YS+ + A F + RD+ +N MI+GY G +A+ L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEM--PVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
+ + D++T V+LLSAC G G S + + E++ ++D+Y
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIH-SYSIKHGLESELFVSNKLIDLYA 293
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN 526
+L + ++ ++ D W + + A ++N
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 182/605 (30%), Positives = 308/605 (50%), Gaps = 55/605 (9%)
Query: 18 KAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 77
K + +AR LFD RD+V++ +++ Y G A +LF R+ S ++ +T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKL-GDMREARELFDRVDSRKNV-----VT 111
Query: 78 LTTMLNLSAKLRVVCYGKQMH--SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 135
T M +S LR KQ+ + + + + + +++ID Y++ G +A +F
Sbjct: 112 WTAM--VSGYLR----SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 195
++VS N+MV A + G++D A+N+F + P D VSW ++ G +NG ++ A
Sbjct: 166 MPE-RNIVSWNSMVKALVQRGRIDEAMNLFERMPR-RDVVSWTAMVDGLAKNGKVDEARR 223
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
LF M E+ I S + TG Y
Sbjct: 224 LFDCMPERNI-------ISWNAMITG--------------------------------YA 244
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
+ + A+ ++ + + + +++I G+ M KA LFD + E+N + WT + +G
Sbjct: 245 QNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITG 304
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
YV++++ E +F + ++ P+ V++L AC+ A L G+Q H I ++
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 376 DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 435
+E + SAL++MYSK G + A K F RD+I +N MIA YAHHG +AI+++ +
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 436 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 495
M K KP A+T++ LL AC H GLVE G +FF + D ++ HY C+VD+ GR
Sbjct: 425 MRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAG 484
Query: 496 QLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 555
+L+ F+ ++ S +GA L+AC ++N ++ K+ +++L+ +D+ YV ++N
Sbjct: 485 RLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSN 544
Query: 556 VYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVC 615
+YAA GK E +R +M+ K K PGCSW+ V H+F GD SH + +A+ S L
Sbjct: 545 IYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSD 604
Query: 616 LYGKL 620
L K+
Sbjct: 605 LRNKM 609
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 51/477 (10%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN SWN +I Y ++ + +A LFD R++VS+NSM+ A D A++L
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDE-AMNL 193
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F RM D ++ T M++ AK V +++ M + + + +++I Y
Sbjct: 194 FERMPRR------DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGY 243
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++ EA +F D S N M+ R+ +M+ A +F + PE N +SW T+
Sbjct: 244 AQNNRIDEADQLFQVMPE-RDFASWNTMITGFIRNREMNKACGLFDRMPEKN-VISWTTM 301
Query: 181 IAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
I GYV+N E AL +F +M+ G ++ N T S+LSAC+ L L G+ +H L+ K+
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
N+ V+S +++ Y K G LIA A+++FD
Sbjct: 362 HQKNEIVTSALLNMYSKSG---------------------ELIA----------ARKMFD 390
Query: 300 S--LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
+ + +R+ + W ++ + Y + +++ + R P + +N+L AC+
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR-KHGFKPSAVTYLNLLFACSHAGL 449
Query: 358 LSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
+ G + ++R + L + E+ + LVD+ + G + +F D+ Y +
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV-TNFINCDDARLSRSFYGAI 508
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
++ H + A ++ +++L+ DA T+V + + G E + M MKE
Sbjct: 509 LSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 255 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL-SERNYVVWTALC 313
CK G + A ++ G+ + + +I GY G+M +A+ LFD + S +N V WTA+
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMV 116
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMI-----------IVNVLGACAIQATLSLGK 362
SGY++S+Q LF+E + +TMI + + + +S
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 363 QTHAYILRTK----LNMDEKLA-------SALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
A + R + +N+ E++ +A+VD +K G + A + F + +R++I
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP--ERNII 234
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEM 436
+N MI GYA + ++A QLFQ M
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVM 259
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 28/260 (10%)
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
S+Y+ LI G + +A++LFD L ER+ V WT + +GY+K
Sbjct: 36 SIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMRE 95
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA---S 381
+LF + + ++ T ++ L + + L ++ M E+ +
Sbjct: 96 ARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQE-----------MPERNVVSWN 144
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
++D Y++ G I +K+ +L + +R+++ +N M+ G ++A+ LF+ M
Sbjct: 145 TMIDGYAQSGRI---DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM---- 197
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+ D +++ A++ G V+ + F M E I + M+ Y + N++++A
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRIDEA 252
Query: 501 VEFMRKIPIQIDASIWGAFL 520
+ + +P + D + W +
Sbjct: 253 DQLFQVMP-ERDFASWNTMI 271
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 295/587 (50%), Gaps = 73/587 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P + ++ Y K + A +F+ + R++V + SM++ Y D C+ L L
Sbjct: 171 VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE-GLVL 229
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F RM+ + +G +E T T++ KL + GK H +VK+ +LS ++SL+DMY
Sbjct: 230 FNRMRE-NNVLG-NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
KCG A VF+ V D V W +
Sbjct: 288 VKCGDISNARRVFNEHSHV---------------------------------DLVMWTAM 314
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I GY NG + AL+LF +M I+ N T+ASVLS C ++ L+LG+ VH L +K G
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV-G 373
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+ V++ +V Y KC R AK +F+
Sbjct: 374 IWDTNVANALVHMYAKCYQNR-------------------------------DAKYVFEM 402
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
SE++ V W ++ SG+ ++ LF +E++ P+ + + ++ ACA +L++
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSLAV 461
Query: 361 GKQTHAYILRTKL--NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
G HAY ++ + + +AL+D Y+KCG+ A F T +++ I ++ MI
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD--TIEEKNTITWSAMIG 519
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
GY G +++LF+EMLK KP+ TF ++LSAC H G+V G+K+F SM +DYN
Sbjct: 520 GYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEE 538
P HY CMVDM R +LE+A++ + K+PIQ D +GAFL+ C +++ L + ++
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 539 LLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 585
+L + D+ S YV ++N+YA++G+WN+ +R M+ + +K+ G S
Sbjct: 640 MLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 239/545 (43%), Gaps = 79/545 (14%)
Query: 25 ARALFDSASHRDLVSYNSMLSAYA-GADGCDTVAL-DLFARMQSARDTIGMDEITLTTML 82
AR +FD D + ML Y + + V L DL + D+I + L
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMK-----HGFRYDDIVFSKAL 149
Query: 83 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 142
+L+ + GK++H +VK + L+ L+DMY+KCG + A+ VF+ D+
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPS-FDNVVLTGLLDMYAKCGEIKSAHKVFN------DI 202
Query: 143 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 202
+N V W ++IAGYV+N E L LF M E
Sbjct: 203 TLRNV---------------------------VCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
Query: 203 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 262
+ N++T +++ ACT L L GK H ++K+ + + + ++D Y KC
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC----- 290
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 322
G+++ A+R+F+ S + V+WTA+ GY +
Sbjct: 291 --------------------------GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 382
LF++ + E + P+ + I +VL C + L LG+ H ++ + D +A+A
Sbjct: 325 NEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANA 382
Query: 383 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 442
LV MY+KC A+ F++ +S++D++ +N +I+G++ +G ++A+ LF M S+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEM--ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 443 PDAITFVALLSACRHRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
P+ +T +L SAC G + +G S+K + ++ ++D Y + + A
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 502 EFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL-KVEADNGSRYVQLANVYAAE 560
I + + W A + +T + EE+L K + N S + + +
Sbjct: 501 LIFDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHT 559
Query: 561 GKWNE 565
G NE
Sbjct: 560 GMVNE 564
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 46/396 (11%)
Query: 73 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF---ALSSLIDMYSKC---GSF 126
+ ITL+ R V + + ++ ND S A S + SKC S
Sbjct: 2 LRSITLSPTRRFGFPPRCVSF-TTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSL 60
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
R+++ V +G + D+ +V+ G A VF + PE D W ++ Y
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE-PDFYLWKVMLRCYCL 119
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
N + L+ +++ G Y+ + L ACT L+ L GK +H ++K N V
Sbjct: 120 NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VV 178
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
+G++D Y KCG ++ A V+ I +++ +S+IA
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIA----------------------- 215
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
GYVK+ CE LF R L + ++ AC + L GK H
Sbjct: 216 --------GYVKNDLCEEGLVLFNRMRENNVL-GNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
++++ + + L ++L+DMY KCG+I+ A + F S D++++ MI GY H+G
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSV 324
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
N+A+ LFQ+M + +KP+ +T ++LS C GL+E
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 19/296 (6%)
Query: 234 LVLKNDGCSNQFV-SSGIVDFYCKCGN---MRYAESVYAGIGIKSPFATSS-LIAGYSSK 288
L +NDG S + SS KC N +R + V G G+ + ++ L++ Y
Sbjct: 30 LTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFF 89
Query: 289 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
G A+ +FD + E ++ +W + Y +++ V KL+ + D ++
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKA 148
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR 408
L AC L GK+ H +++ + D + + L+DMY+KCG I A K F +T R
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT--LR 205
Query: 409 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 468
+V+ + MIAGY + + + LF M + ++ + T+ L+ AC + G+ F
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 469 MSMKEDYNVLPEIYHYACMV----DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+ V I +C+V DMY + + A + +D +W A +
Sbjct: 266 GCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 315
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 284/576 (49%), Gaps = 71/576 (12%)
Query: 40 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 99
++S++ ++G + L A R+ + T +L KLR Q H+
Sbjct: 70 WDSLIGHFSGGITLNR-RLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 100 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 159
++VK D F +SLI YS G F A +F G
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA----------------------- 164
Query: 160 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 219
E D V+W +I G+V+NG A+ F+EM + G+ N+ T+ SVL A
Sbjct: 165 ----------EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 220 TGLKCLKLGKCVHALVLKNDGCS-NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 278
++ ++ G+ VH L L+ + F+ S +VD Y KC S Y
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC-------SCY----------- 256
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
A+++FD + RN V WTAL +GYV+S+ + +F E ++ +
Sbjct: 257 -------------DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD-V 302
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
P+ + +VL ACA L G++ H Y+++ + ++ + L+D+Y KCG + A
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 399 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
F+ + +++V + MI G+A HG+ A LF ML + P+ +TF+A+LSAC H
Sbjct: 363 VFERL--HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 420
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGA 518
GLVE G + F+SMK +N+ P+ HYACMVD++GR LE+A + ++P++ +WGA
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 519 FLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEA 578
+C ++ + L K A ++K++ + RY LAN+Y+ W+E+ R+RK+M+ ++
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 579 TKLPGCSWIYVENGIHVFTSGDTSHS-KADAIYSTL 613
K PG SWI V+ + F + D ++D +Y TL
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 180/396 (45%), Gaps = 72/396 (18%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F N++I Y + A LFD A +D+V++ +M+ + +G + A+ F M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFV-RNGSASEAMVYFVEM 195
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKC 123
+ + + +E+T+ ++L + K+ V +G+ +H ++T F SSL+DMY KC
Sbjct: 196 K--KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
+ +A VF ++ S+N V+W LIAG
Sbjct: 254 SCYDDAQKVFD------EMPSRN---------------------------VVTWTALIAG 280
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
YVQ+ ++ + +F EM++ + N+ TL+SVLSAC + L G+ VH ++KN N
Sbjct: 281 YVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEIN 340
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ ++D Y KCG + A V+ + K+ + +++I G+++ G A LF
Sbjct: 341 TTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF----- 395
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+T L S + P+ + + VL ACA + G++
Sbjct: 396 -----YTMLSS----------------------HVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 364 THAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAE 397
++ + NM+ K + +VD++ + G + A+
Sbjct: 429 LFLS-MKGRFNMEPKADHYACMVDLFGRKGLLEEAK 463
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/612 (29%), Positives = 315/612 (51%), Gaps = 73/612 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA+I Y + + QA + ++ D+V++NS++ Y + AL+ F+ M +A
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV-QNLMYKEALEFFSDMIAAGH 382
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
DE+++T+++ S +L + G ++H+Y++K D + ++LIDMYSKC
Sbjct: 383 K--SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN----- 435
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
C G+ + ++ D +SW T+IAGY QN
Sbjct: 436 ---------------------LTCYMGRAFLRMHD-------KDLISWTTVIAGYAQNDC 467
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL LF ++ +K +E ++ L S+L A + LK + + K +H +L+ G + + +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK-GLLDTVIQNE 526
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+VD Y KC NM YA R+F+S+ ++ V W
Sbjct: 527 LVDVYGKCRNMGYA-------------------------------TRVFESIKGKDVVSW 555
Query: 310 TAL-CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
T++ S + + EAV +LFR T L D++ ++ +L A A + L+ G++ H Y+
Sbjct: 556 TSMISSSALNGNESEAV-ELFRRMVET-GLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
LR ++ +A A+VDMY+ CG++ A+ F + + ++ Y MI Y HG
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAYGMHGCGKA 671
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
A++LF +M ++ PD I+F+ALL AC H GL++ G F M+ +Y + P HY C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
DM GR N + +A EF++ + + A +W A L AC+ ++ + + A + LL++E N
Sbjct: 732 DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG 791
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
V ++NV+A +G+WN++ ++R +M+ K PGCSWI ++ +H FT+ D SH ++
Sbjct: 792 NLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKE 851
Query: 609 IYSTLVCLYGKL 620
IY L + KL
Sbjct: 852 IYEKLSEVTRKL 863
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 73/451 (16%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHR-DLVSYNSMLSAYAGADGCDTVALDLF 61
H F NA++ Y K +L+ AR LFD + D V +NS+LS+Y+ G L+LF
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS-TSGKSLETLELF 272
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMY 120
M + T+ + L GK++H+ ++K++ S+ + ++LI MY
Sbjct: 273 REMHMTGP--APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++CG +A + +M+ A D V+WN+L
Sbjct: 331 TRCGKMPQAERILR----------------------QMNNA-----------DVVTWNSL 357
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I GYVQN + AL F +MI G + ++ ++ S+++A L L G +HA V+K+
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
SN V + ++D Y KC N+ + Y G R F
Sbjct: 418 DSNLQVGNTLIDMYSKC-NL----TCYMG--------------------------RAFLR 446
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ +++ + WT + +GY ++ +LFR+ I D MI+ ++L A ++ ++ +
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI-DEMILGSILRASSVLKSMLI 505
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
K+ H +ILR L +D + + LVD+Y KC N+ YA + F+ + +DV+ + MI+
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESI--KGKDVVSWTSMISSS 562
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVAL 451
A +G E++A++LF+ M++ L D++ + +
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCI 593
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 70/444 (15%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ Y K +L A +FD R ++N+M+ AY ++G AL L+ M+ +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV-SNGEPASALALYWNMRVEGVPL 180
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
G+ + +L AKLR + G ++HS +VK + F +++L+ MY+K A
Sbjct: 181 GLS--SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
+F G E D V WN++++ Y +G
Sbjct: 239 LFDGFQ--------------------------------EKGDAVLWNSILSSYSTSGKSL 266
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ-FVSSGI 250
L LF EM G N +T+ S L+AC G KLGK +HA VLK+ S++ +V + +
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
+ Y +CG M AE R+ ++ + V W
Sbjct: 327 IAMYTRCGKMPQAE-------------------------------RILRQMNNADVVTWN 355
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
+L GYV++ + + F + D + + +++ A + L G + HAY+++
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
+ + ++ + L+DMYSKC Y ++F + D+D+I + +IAGYA + +A+
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 431 QLFQEMLKISLKPDAITFVALLSA 454
+LF+++ K ++ D + ++L A
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRA 496
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/563 (23%), Positives = 241/563 (42%), Gaps = 111/563 (19%)
Query: 54 DTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLS-KFA 112
D V + F R+ + + ++ +L L K R V G+Q+HS + KT F
Sbjct: 61 DGVLTEAFQRLDVSENNSPVE--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 113 LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 172
L+ MY KCGS +A VF D + D +
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVF---DEMPDRTA---------------------------- 147
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
+WNT+I YV NG AL L+ M +G+ + ++L AC L+ ++ G +H
Sbjct: 148 --FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 292
+L++K S F+ + +V Y K +++
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAK-------------------------------NDDLS 234
Query: 293 KAKRLFDSLSER-NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
A+RLFD E+ + V+W ++ S Y S + +LFRE T P++ IV+ L A
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTA 293
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
C + LGK+ HA +L++ + E + +AL+ MY++CG + AE+ + + ++ DV
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DV 351
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC-RHRGLVELGEKFFM 469
+ +N +I GY + +A++ F +M+ K D ++ ++++A R L+ E
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 470 SMKEDY-------NVLPEIY----------------------HYACMVDMYGRGNQLEKA 500
+K + N L ++Y + ++ Y + + +A
Sbjct: 412 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 471
Query: 501 VEFMRKIP---IQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
+E R + ++ID I G+ L A + + +VK+ +L+ + +L +VY
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVY 531
Query: 558 AAEGKWNEMG---RIRKEMRGKE 577
GK MG R+ + ++GK+
Sbjct: 532 ---GKCRNMGYATRVFESIKGKD 551
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/607 (28%), Positives = 305/607 (50%), Gaps = 73/607 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+++I YIK + +A +FD D+V+++SM+S + +G A++ F RM A D
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE-KNGSPYQAVEFFRRMVMASD 158
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFR 127
+ D +TL T+++ KL G+ +H ++++ +NDLS ++SL++ Y+K +F+
Sbjct: 159 -VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS--LVNSLLNCYAKSRAFK 215
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
EA N+F M+A D +SW+T+IA YVQN
Sbjct: 216 EAVNLFK-------------MIAE--------------------KDVISWSTVIACYVQN 242
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
G AL +F +M++ G E N T+ VL AC L+ G+ H L ++ + VS
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ +VD Y KC + E YA +F + ++ V
Sbjct: 303 TALVDMYMKCFS---PEEAYA----------------------------VFSRIPRKDVV 331
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
W AL SG+ + + F PD +++V VLG+C+ L K H+Y
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
+++ + + + ++LV++YS+CG++ A K F + + +D +++ +I GY HG
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTVVWTSLITGYGIHGKGT 449
Query: 428 KAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
KA++ F M+K S +KP+ +TF+++LSAC H GL+ G + F M DY + P + HYA
Sbjct: 450 KALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAV 509
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
+VD+ GR L+ A+E +++P I G L AC+I+ N + + ++L ++E+++
Sbjct: 510 LVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNH 569
Query: 547 GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA 606
Y+ ++NVY +G+W + ++R ++ + K S I + +H F + D H +
Sbjct: 570 AGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEK 629
Query: 607 DAIYSTL 613
+ +Y L
Sbjct: 630 EPVYGLL 636
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 226/511 (44%), Gaps = 79/511 (15%)
Query: 25 ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL 84
AR +F + R L +N++L + + + V L F+ M RD D TL L
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV-LYHFSHM--FRDEEKPDNFTLPVALKA 69
Query: 85 SAKLRVVCYGKQMHSYM---VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+LR V YG+ +H ++ V +DL + SSLI MY KCG EA +F
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIEALRMFDEL----- 122
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
E D V+W+++++G+ +NG +A+ F M+
Sbjct: 123 ----------------------------EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 202 -EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ ++ TL +++SACT L +LG+CVH V++ G SN
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDLS-------------- 199
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+SL+ Y+ +A LF ++E++ + W+ + + YV++
Sbjct: 200 ----------------LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+F + + P+ ++ VL ACA L G++TH +R L + K++
Sbjct: 244 AAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM-LKI 439
+ALVDMY KC + A F + +DV+ + +I+G+ +G +++I+ F M L+
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRI--PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
+ +PDAI V +L +C G +E K F S Y + A +V++Y R L
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
A + I ++ D +W + + I+ T
Sbjct: 420 ASKVFNGIALK-DTVVWTSLITGYGIHGKGT 449
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 168/375 (44%), Gaps = 41/375 (10%)
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WNTL+ + E L F M + + TL L AC L+ + G+ +H V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 237 KNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
K+ S+ +V S ++ Y KCG M +A
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGR-------------------------------MIEAL 116
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
R+FD L + + V W+++ SG+ K+ + FR + PD + ++ ++ AC
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+ LG+ H +++R + D L ++L++ Y+K A F+++ +++DVI ++
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI--AEKDVISWST 234
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKED 474
+IA Y +G +A+ +F +M+ +P+ T + +L AC +E G K +++++
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQ 534
E+ +VDMY + E+A +IP + D W A ++ +N + +
Sbjct: 295 LET--EVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNG---MAHR 348
Query: 535 AEEELLKVEADNGSR 549
+ EE + +N +R
Sbjct: 349 SIEEFSIMLLENNTR 363
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 307/617 (49%), Gaps = 77/617 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y K ++ AR +F + +D VS+NSM++ +GC A++ + M+ R
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL-DQNGCFIEAVERYKSMR--RH 409
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I TL + L+ A L+ G+Q+H +K DL+ ++L+ +Y++ G E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+FS PE +D VSWN++I ++
Sbjct: 470 RKIFSSM--------------------------------PE-HDQVSWNSIIGALARSER 496
Query: 190 -MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ A+ F+ G + N+ T +SVLSA + L +LGK +H L LKN+ +
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN 556
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER-NYV 307
++ Y KCG M E ++F ++ER + V
Sbjct: 557 ALIACYGKCGEMDGCE-------------------------------KIFSRMAERRDNV 585
Query: 308 VWTALCSGYVKSQQCEAVFKL-FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
W ++ SGY+ ++ L + +T + L D+ + VL A A ATL G + HA
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHA 643
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+R L D + SALVDMYSKCG + YA + F T R+ +N MI+GYA HG
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN--TMPVRNSYSWNSMISGYARHGQG 701
Query: 427 NKAIQLFQEM-LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 485
+A++LF+ M L PD +TFV +LSAC H GL+E G K F SM + Y + P I H++
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 486 CMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNN--TTLVKQAEEELLKVE 543
CM D+ GR +L+K +F+ K+P++ + IW L AC N L K+A E L ++E
Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLE 821
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
+N YV L N+YAA G+W ++ + RK+M+ + K G SW+ +++G+H+F +GD SH
Sbjct: 822 PENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSH 881
Query: 604 SKADAIYSTLVCLYGKL 620
AD IY L L K+
Sbjct: 882 PDADVIYKKLKELNRKM 898
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 176/400 (44%), Gaps = 82/400 (20%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
N ++ A G A VF + P + VSW +++GY +NG + AL +M+++GI
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMP-LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGI 98
Query: 206 EYNQHTLASVLSACTGLKCLKL--GKCVHALVLKNDGCSNQFVSSGIVDFYCKC-GNMRY 262
NQ+ SVL AC + + + G+ +H L+ K + VS+ ++ Y KC G++ Y
Sbjct: 99 FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD----------------------S 300
A + I +K+ + +S+I+ YS G+ A R+F S
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 301 LSER-------------------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
L+E + V + L S + KS K+F + T A+ +
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 342 TMIIVNVLGACAIQAT---------LSLGKQTHAYILRT--KLNMDEK------------ 378
+++ V +AT + + +++ +L + + ++ E+
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 379 -LASALVD-----------MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+ + LVD MY+KCG+IA A + F +T D+D + +N MI G +G
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT--DKDSVSWNSMITGLDQNGCF 396
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+A++ ++ M + + P + T ++ LS+C +LG++
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
K + ++LI Y G+ A+++FD + RN V W + SGY ++ + + R+
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSL--GKQTHAYILRTKLNMDEKLASALVDMYSKC 390
E + + V+VL AC ++ + G+Q H + + +D +++ L+ MY KC
Sbjct: 94 -VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 391 -GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
G++ YA +F + ++ + +N +I+ Y+ G + A ++F M +P TF
Sbjct: 153 IGSVGYALCAFGDI--EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG 210
Query: 450 ALL-SAC 455
+L+ +AC
Sbjct: 211 SLVTTAC 217
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 330/658 (50%), Gaps = 60/658 (9%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN + NA++ Y+K + +A LF +++VS+ ML+A DG A++L
Sbjct: 103 MPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCD-DGRSEDAVEL 160
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M R+ + + TL T L + + KQ+ M + D+ + +++I Y
Sbjct: 161 FDEMPE-RNVVSWN--TLVTGLIRNGDME---KAKQVFDAM--PSRDVVSW--NAMIKGY 210
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+ EA +F G ++V+ +MV CR G + A +F + PE N VSW +
Sbjct: 211 IENDGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN-IVSWTAM 268
Query: 181 IAGYVQNGYMERALTLFIEMIEK--GIEYNQHTLASVLSACTGL--KCLKLGKCVHALVL 236
I+G+ N AL LF+EM + + N TL S+ AC GL + +LG+ +HA V+
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
Query: 237 KN-------DG-----CSNQFVSSG--------------------IVDFYCKCGNMRYAE 264
N DG + + SSG I++ Y K G++ AE
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 265 SVYAGI-GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 323
+++ + + + +S+I GY G++++A LF L +++ V WT + SG V+++
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFA 448
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL--AS 381
L + L P +L + + L GK H I +T D L +
Sbjct: 449 EAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
+LV MY+KCG I A + F + +D + +N MI G +HHG +KA+ LF+EML
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKMVQ--KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 442 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
KP+++TF+ +LSAC H GL+ G + F +MKE Y++ P I HY M+D+ GR +L++A
Sbjct: 566 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 625
Query: 502 EFMRKIPIQIDASIWGAFLNACKIN----NNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
EF+ +P D +++GA L C +N + + ++A LL+++ N +V L NVY
Sbjct: 626 EFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVY 685
Query: 558 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVC 615
A G+ + +RKEM K K PGCSW+ V +VF SGD S S+A + + C
Sbjct: 686 AGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIFC 743
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/549 (21%), Positives = 207/549 (37%), Gaps = 156/549 (28%)
Query: 108 LSKFALSSLI-------DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDM 160
LSK +L S I D GS+R ++ ++ A++ +G +
Sbjct: 13 LSKLSLRSSISCRRYYGDKIPNYGSYRRGFS------------NEEALILRRLSEGGLVH 60
Query: 161 ALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS 217
A ++ K P+ N V W +L++ Y + GY++ A LF M E+ I + +
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI-------VTCNA 113
Query: 218 ACTG-LKCLKLGKC---------------VHALVLKNDGCSNQFVS-------------S 248
TG +KC ++ + V L +DG S V +
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
+V + G+M A+ V+ + + + +++I GY M +AK LF +SE+N V
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT 233
Query: 309 WTALCSGYVKSQQCEAVFKLFREF--------------------------------RTTE 336
WT++ GY + ++LF E + +
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVD 293
Query: 337 ALIPDTMIIVNVLGACAIQAT--LSLGKQTHAYILRT---KLNMDEKLASALVDMYSKCG 391
A+ P+ ++++ AC LG+Q HA ++ ++ D +LA +LV MY+ G
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 392 NIAYAE----KSFQLVT------------DSDR------------DVILYNVMIAGYAHH 423
IA A+ +SF L + D +R D + + MI GY
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 424 GFENKAIQLFQ-------------------------------EMLKISLKPDAITFVALL 452
G ++A LFQ +M++ LKP T+ LL
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 453 SACRHRGLVELGEKFFMSMKEDYNVL-PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQI 511
S+ ++ G+ + + P++ +V MY + +E A E K+ +Q
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQK 532
Query: 512 DASIWGAFL 520
D W + +
Sbjct: 533 DTVSWNSMI 541
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 261/482 (54%), Gaps = 21/482 (4%)
Query: 158 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER--ALTLFIEMI-EKGIEYNQHTLAS 214
+D A +F + P+ N SWNT+I G+ ++ + A+TLF EM+ ++ +E N+ T S
Sbjct: 75 LDYAHKIFNQMPQRN-CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
VL AC ++ GK +H L LK ++FV S +V Y CG M+ A ++ I+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 275 PFATSS--------------LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+ +I GY G+ A+ LFD + +R+ V W + SGY +
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+ ++FRE + + + P+ + +V+VL A + +L LG+ H Y + + +D+ L
Sbjct: 254 FFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
SAL+DMYSKCG I A F+ + + VI ++ MI G+A HG AI F +M +
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPREN--VITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
++P + ++ LL+AC H GLVE G ++F M + P I HY CMVD+ GR L++A
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 501 VEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAE 560
EF+ +PI+ D IW A L AC++ N + K+ L+ + + YV L+N+YA++
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 561 GKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
G W+E+ +R M+ K+ K PGCS I ++ +H F D SH KA I S LV + KL
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 621 YL 622
L
Sbjct: 551 RL 552
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 200/463 (43%), Gaps = 89/463 (19%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT-VALDLFARMQSARDTIGMDEITLT 79
+L A +F+ R+ S+N+++ ++ +D +A+ LF M S + + + T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD-EFVEPNRFTFP 132
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--- 136
++L AK + GKQ+H +K +F +S+L+ MY CG ++A +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 137 -DGVV---------DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
D VV ++V N M+ R G A +F K + VSWNT+I+GY
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ-RSVVSWNTMISGYSL 251
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQF 245
NG+ + A+ +F EM + I N TL SVL A + L L+LG+ +H L ++ G +
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH-LYAEDSGIRIDDV 310
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
+ S ++D Y KCG + KA +F+ L N
Sbjct: 311 LGSALIDMYSKCGIIE-------------------------------KAIHVFERLPREN 339
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
+ W+A+ +G+ Q F + R + P + +N+L AC+ + G++
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQA-GVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 366 AYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
+ ++ ++ ++ +VD+ + G + AE
Sbjct: 399 SQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAE-------------------------- 431
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+ +L + +KPD + + ALL ACR +G VE+G++
Sbjct: 432 ----------EFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 68
WN +I Y++ + AR LFD R +VS+N+M+S Y+ +G A+++F M+
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS-LNGFFKDAVEVFREMKKG- 268
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
I + +TL ++L ++L + G+ +H Y + + S+LIDMYSKCG
Sbjct: 269 -DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG---- 323
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
++ K A++VF + P N ++W+ +I G+ +G
Sbjct: 324 -------------IIEK---------------AIHVFERLPREN-VITWSAMINGFAIHG 354
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
A+ F +M + G+ + ++L+AC+ ++ G+ + ++ DG +
Sbjct: 355 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 249 G-IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL 301
G +VD + G + AE + IK +L+ +GN+ KR+ + L
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 281/534 (52%), Gaps = 69/534 (12%)
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+L L A+ V K H +++ + L+ LI+ YSKCG A VF
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF------- 119
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
DG ++ +L VSWNT+I Y +N AL +F+EM
Sbjct: 120 --------------DGMLERSL------------VSWNTMIGLYTRNRMESEALDIFLEM 153
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
+G ++++ T++SVLSAC G+ C L K +H L +K N +V + ++D Y KCG
Sbjct: 154 RNEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
++ A ++F+S+ +++ V W+++ +GYV++
Sbjct: 213 IK-------------------------------DAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
+ E L+R + +L + + +V+ AC+ A L GKQ HA I ++ + +
Sbjct: 242 KNYEEALLLYRRAQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
AS+ VDMY+KCG++ + F V ++++ L+N +I+G+A H + + LF++M +
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEV--QEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
+ P+ +TF +LLS C H GLVE G +FF M+ Y + P + HY+CMVD+ GR L +
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
A E ++ IP ASIWG+ L +C++ N L + A E+L ++E +N +V L+N+YAA
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 560 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+W E+ + RK +R + K+ G SWI +++ +H F+ G++ H + I STL
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 54/421 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I AY K + AR +FD R LVS+N+M+ Y + ++ ALD+F M++ +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT-RNRMESEALDIFLEMRN--E 156
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
E T++++L+ K++H VKT DL+ + ++L+D+Y+KCG ++A
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF ++ + +V+W++++AGYVQN
Sbjct: 217 VQVF---------------------------------ESMQDKSSVTWSSMVAGYVQNKN 243
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E AL L+ +E NQ TL+SV+ AC+ L L GK +HA++ K+ SN FV+S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE----RN 305
VD Y KCG++R + +++ + K+ +++I+G++ + LF+ + + N
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V +++L S + E + F+ RTT L P+ V +C + G +
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV-----VHYSCMVDILGRAGLLSE 418
Query: 366 AYILRTKLNMDEK-------LASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMI 417
AY L + D LAS V + +A AEK F+L + + V+L N+
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA-AEKLFELEPENAGNHVLLSNIYA 477
Query: 418 A 418
A
Sbjct: 478 A 478
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 41/281 (14%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N + A++ Y K + A +F+S + V+++SM++ Y + AL L+ R
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE-ALLLYRRA 254
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
Q R ++ ++ TL++++ + L + GKQMH+ + K+ + F SS +DMY+KCG
Sbjct: 255 Q--RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S RE+Y +FS V KN E WNT+I+G+
Sbjct: 313 SLRESYIIFS----------------------------EVQEKNLEL-----WNTIISGF 339
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++ + + LF +M + G+ N+ T +S+LS C ++ G+ L+ G S
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 245 FVS-SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
V S +VD + G + A + I PF ++ I G
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSI----PFDPTASIWG 436
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 344 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 403
++ +L CA + K H I+R L D L + L++ YSKCG + A + F +
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 404 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
+R ++ +N MI Y + E++A+ +F EM K T ++LSAC
Sbjct: 123 L--ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 285/580 (49%), Gaps = 69/580 (11%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
SWN +I Y KA + +A LF ++VS+N ++S + D AL+ RMQ
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV--DKGSPRALEFLVRMQ-- 230
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R+ + +D L L + ++ GKQ+H +VK+ + S FA+S+LIDMYS CGS
Sbjct: 231 REGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLI 290
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A +VF + +A+N + WN++++G++ N
Sbjct: 291 YAADVFH----------------------QEKLAVN--------SSVAVWNSMLSGFLIN 320
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
E AL L +++ + + ++ +TL+ L C L+LG VH+LV+ + + V
Sbjct: 321 EENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG 380
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
S +VD + GN++ A +LF L ++ +
Sbjct: 381 SILVDLHANVGNIQ-------------------------------DAHKLFHRLPNKDII 409
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
++ L G VKS F LFRE L D I+ N+L C+ A+L GKQ H
Sbjct: 410 AFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
++ + A+ALVDMY KCG I F + + RDV+ + +I G+ +G
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE--RDVVSWTGIIVGFGQNGRVE 526
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+A + F +M+ I ++P+ +TF+ LLSACRH GL+E +MK +Y + P + HY C+
Sbjct: 527 EAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCV 586
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VD+ G+ ++A E + K+P++ D +IW + L AC + N LV E+LLK D+
Sbjct: 587 VDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDP 646
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
S Y L+N YA G W+++ ++R+ + K K G SWI
Sbjct: 647 SVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSWI 685
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 235/499 (47%), Gaps = 39/499 (7%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+N F N +I Y+ L+ A +FD S R++V++ +M+S Y +DG A++L+ R
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT-SDGKPNKAIELYRR 96
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M + + +E + +L + + G ++ + K ++S++DMY K
Sbjct: 97 MLDSEEE-AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKN 155
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G EA + F S N +++ C+ G MD A+ +F + P+ N VSWN LI+G
Sbjct: 156 GRLIEANSSFKEILRPSS-TSWNTLISGYCKAGLMDEAVTLFHRMPQPN-VVSWNCLISG 213
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
+V G RAL + M +G+ + L L AC+ L +GK +H V+K+ S+
Sbjct: 214 FVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESS 272
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
F S ++D Y CG++ YA V+ + A +S +A
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFH----QEKLAVNSSVA-------------------- 308
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
VW ++ SG++ +++ EA L + ++ L D+ + L C L LG Q
Sbjct: 309 ----VWNSMLSGFLINEENEAALWLLLQIYQSD-LCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H+ ++ + +D + S LVD+++ GNI A K F + ++D+I ++ +I G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL--PNKDIIAFSGLIRGCVKS 421
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIY 482
GF + A LF+E++K+ L D +L C + G++ + +K+ Y P
Sbjct: 422 GFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP--V 479
Query: 483 HYACMVDMYGRGNQLEKAV 501
+VDMY + +++ V
Sbjct: 480 TATALVDMYVKCGEIDNGV 498
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 16/380 (4%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCV 231
+ V+W T+++GY +G +A+ L+ M++ E N+ ++VL AC + ++LG V
Sbjct: 70 NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 232 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
+ + K + + + + +VD Y K G + A S + I S + ++LI+GY G M
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
+A LF + + N V W L SG+V A+ L R R E L+ D + L A
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQR--EGLVLDGFALPCGLKA 247
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDV 410
C+ L++GKQ H ++++ L SAL+DMYS CG++ YA F Q + V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK---- 466
++N M++G+ + A+ L ++ + L D+ T L C + + LG +
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 467 -FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKI 525
+ DY V + +VD++ ++ A + ++P + D + + C
Sbjct: 368 VVVSGYELDYIV------GSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Query: 526 NNNTTLVKQAEEELLKVEAD 545
+ +L EL+K+ D
Sbjct: 421 SGFNSLAFYLFRELIKLGLD 440
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 68/348 (19%)
Query: 212 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 271
+A+ L C ++ K G+ + A V+K N F+++ ++ Y + R
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYV---DFRL--------- 55
Query: 272 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 331
++ A ++FD +SERN V WT + SGY + +L+R
Sbjct: 56 -------------------LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRR 96
Query: 332 FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCG 391
+E + + VL AC + + LG + I + L D L +++VDMY K G
Sbjct: 97 MLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG 156
Query: 392 NIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL---------- 441
+ A SF+ + +N +I+GY G ++A+ LF M + ++
Sbjct: 157 RLIEANSSFKEILRPSSTS--WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 442 ----KPDAITFVAL----------------LSACRHRGLVELGEKFFMS-MKEDYNVLPE 480
P A+ F+ L AC GL+ +G++ +K P
Sbjct: 215 VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSP- 273
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAS--IWGAFLNACKIN 526
+ + ++DMY L A + + + +++S +W + L+ IN
Sbjct: 274 -FAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 259/526 (49%), Gaps = 71/526 (13%)
Query: 96 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 155
++H +++ +D F + LI MYS GS A VF D K +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF-------DKTRKRTIYV----- 145
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
WN L G+ E L L+ +M G+E ++ T V
Sbjct: 146 ---------------------WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 216 LSACTGLKC----LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 271
L AC +C L GK +HA + + S+ ++ + +VD Y + G + YA V+ G+
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 272 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 331
+ RN V W+A+ + Y K+ + + FRE
Sbjct: 245 V-------------------------------RNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 332 F-RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
R T+ P+++ +V+VL ACA A L GK H YILR L+ + SALV MY +C
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G + ++ F + DRDV+ +N +I+ Y HG+ KAIQ+F+EML P +TFV+
Sbjct: 334 GKLEVGQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 451 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 510
+L AC H GLVE G++ F +M D+ + P+I HYACMVD+ GR N+L++A + ++ + +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 511 IDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIR 570
+WG+ L +C+I+ N L ++A L +E N YV LA++YA W+E+ R++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 571 KEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
K + + KLPG W+ V ++ F S D + + I++ LV L
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 218/558 (39%), Gaps = 123/558 (22%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ F +I Y ++ AR +FD R + +N++ A A + V L L+ +
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV-LGLYWK 168
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCY------GKQMHSYMVKTANDLSKFALSSLI 117
M + IG++ T L A + C GK++H+++ + + +++L+
Sbjct: 169 M----NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
DMY++ G A VF G V ++VS +AM+A
Sbjct: 225 DMYARFGCVDYASYVFGGMP-VRNVVSWSAMIAC-------------------------- 257
Query: 178 NTLIAGYVQNGYMERALTLFIEMIE--KGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
Y +NG AL F EM+ K N T+ SVL AC L L+ GK +H +
Sbjct: 258 ------YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
L+ S V S +V Y +CG + +
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQ------------------------------- 340
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
R+FD + +R+ V W +L S Y + ++F E A P + V+VLGAC+ +
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHE 399
Query: 356 ATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
+ GK+ + R + + + +VD+ + +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL--------------------- 438
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK-----FFM 469
++A ++ Q+M +P + +LL +CR G VEL E+ F +
Sbjct: 439 ------------DEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFAL 483
Query: 470 SMKE--DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINN 527
K +Y +L +IY A M D R +L + ++K+P + + + ++
Sbjct: 484 EPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH-RGLQKLPGRCWMEVRRKMYSFVSVDE 542
Query: 528 NTTLVKQAEEELLKVEAD 545
L++Q L+K+ D
Sbjct: 543 FNPLMEQIHAFLVKLAED 560
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 12/214 (5%)
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
C +++LS + H +IL + D LA+ L+ MYS G++ YA K F R +
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFD--KTRKRTIY 144
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
++N + G + + L+ +M +I ++ D T+ +L AC E M
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV---ASECTVNHLMKG 201
Query: 472 KEDYNVL------PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKI 525
KE + L +Y +VDMY R ++ A +P++ S W A +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMIACYAK 260
Query: 526 NNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
N + E+++ D+ V + +V A
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 287/580 (49%), Gaps = 78/580 (13%)
Query: 11 AIIMAYIKAHNLTQARALF---DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
A+I Y K+ ++ + +F D +++V N M+++++ + A+ LF RM
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK-AIRLFTRM--L 445
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
++ + DE ++ ++L++ L + GKQ+H Y +K+ L SSL +YSKCGS
Sbjct: 446 QEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
E+Y +F G F D W ++I+G+ +
Sbjct: 503 ESYKLFQGI---------------------------------PFKDNACWASMISGFNEY 529
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
GY+ A+ LF EM++ G ++ TLA+VL+ C+ L GK +H L+ +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
S +V+ Y KCG+++ A ++++D L E + V
Sbjct: 590 SALVNMYSKCGSLKLA-------------------------------RQVYDRLPELDPV 618
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
++L SGY + + F LFR+ D+ I ++L A A+ SLG Q HAY
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDM-VMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
I + L + + S+L+ MYSK G+I K+F + D +I + +IA YA HG N
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD--LIAWTALIASYAQHGKAN 735
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+A+Q++ M + KPD +TFV +LSAC H GLVE SM +DY + PE HY CM
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VD GR +L +A F+ + I+ DA +WG L ACKI+ L K A ++ +++E +
Sbjct: 796 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDA 855
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
Y+ L+N+ A G+W+E+ RK M+G K PG S +
Sbjct: 856 GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 237/522 (45%), Gaps = 83/522 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F +++ Y + ++ A LFD+ D+VS N M+S Y + +L F++M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEE-SLRFFSKM 141
Query: 65 QSARDTIGMD--EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
+G + EI+ ++++ + L+ + + + + +K + S+LID++SK
Sbjct: 142 H----FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
F +AY VF RD ++ NV+ WNT+IA
Sbjct: 198 NLRFEDAYKVF--------------------RD---SLSANVY----------CWNTIIA 224
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
G ++N LF EM + + +T +SVL+AC L+ L+ GK V A V+K G
Sbjct: 225 GALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKC-GAE 283
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ FV + IVD Y KCG+ M +A +F +
Sbjct: 284 DVFVCTAIVDLYAKCGH-------------------------------MAEAMEVFSRIP 312
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+ V WT + SGY KS + ++F+E R + I + + +V+ AC + +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI-NNCTVTSVISACGRPSMVCEAS 371
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
Q HA++ ++ +D +A+AL+ MYSK G+I +E+ F+ + D R I+ NVMI ++
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQ 430
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSA--CRHRGLVELGEKFFMSMKEDYNVLPE 480
KAI+LF ML+ L+ D + +LLS C + G G + D V
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
++ +Y + LE++ + + IP + D + W + ++
Sbjct: 491 LF------TLYSKCGSLEESYKLFQGIPFK-DNACWASMISG 525
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 253/458 (55%), Gaps = 9/458 (1%)
Query: 148 MVAACCRDGKMDMALNVFWK--NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
MV C + MD A +F + NP + +N++I Y N + ++ +++ K
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNP---NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSF 104
Query: 206 EY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
E ++ T + +C L LGK VH + K + + ++D Y K ++ A
Sbjct: 105 ELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
V+ + + + +SL++GY+ G M KAK LF + ++ V WTA+ SGY
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
FRE + + PD + +++VL +CA +L LGK H Y R + +AL+
Sbjct: 225 AMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
+MYSKCG I+ A + F + +DVI ++ MI+GYA+HG + AI+ F EM + +KP+
Sbjct: 284 EMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN 341
Query: 445 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 504
ITF+ LLSAC H G+ + G ++F M++DY + P+I HY C++D+ R +LE+AVE
Sbjct: 342 GITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEIT 401
Query: 505 RKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 564
+ +P++ D+ IWG+ L++C+ N + A + L+++E ++ YV LAN+YA GKW
Sbjct: 402 KTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWE 461
Query: 565 EMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
++ R+RK +R + K PG S I V N + F SGD S
Sbjct: 462 DVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 25/390 (6%)
Query: 18 KAHNLTQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGM-DE 75
K ++ A LF+ S+ ++ YNS++ AY + CD + + Q R + + D
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRI----YKQLLRKSFELPDR 109
Query: 76 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 135
T M A L GKQ+H ++ K ++LIDMY K +A+ VF
Sbjct: 110 FTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 195
D++S N++++ R G+M A +F + VSW +I+GY G A+
Sbjct: 170 MYE-RDVISWNSLLSGYARLGQMKKAKGLFHLMLD-KTIVSWTAMISGYTGIGCYVEAMD 227
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
F EM GIE ++ +L SVL +C L L+LGK +H + V + +++ Y
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYS 287
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTA 311
KCG + A ++ + K + S++I+GY+ GN A F+ + + N + +
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 312 L---CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
L CS Q+ F + R+ E I +++VL GK A
Sbjct: 348 LLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA--------GKLERAVE 399
Query: 369 LRTKLNM--DEKLASALVDMYSKCGNIAYA 396
+ + M D K+ +L+ GN+ A
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 44/338 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ SWN+++ Y + + +A+ LF + +VS+ +M+S Y G GC A+D
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI-GCYVEAMDF 228
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ A I DEI+L ++L A+L + GK +H Y + ++LI+MY
Sbjct: 229 FREMQLA--GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 286
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCG +A +F +G D +SW+T+
Sbjct: 287 SKCGVISQAIQLFGQMEG---------------------------------KDVISWSTM 313
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I+GY +G A+ F EM ++ N T +LSAC+ + + G ++ ++
Sbjct: 314 ISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQ 373
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLF 298
+ G ++D + G + A + + +K SL++ + GN+ A
Sbjct: 374 IEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
Query: 299 DSLSER------NYVVWTALCSGYVKSQQCEAVFKLFR 330
D L E NYV+ + + K + + K+ R
Sbjct: 434 DHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIR 471
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 36/334 (10%)
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
+S F + ++ +M A RLF+ +S N ++ ++ Y + V +++++
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
+PD + +CA + LGKQ H ++ + +AL+DMY K +
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK------------------------ 428
+ A K F + +RDVI +N +++GYA G K
Sbjct: 160 LVDAHKVFDEMY--ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYT 217
Query: 429 -------AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
A+ F+EM ++PD I+ +++L +C G +ELG K+ E L +
Sbjct: 218 GIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQT 276
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
+++MY + + +A++ ++ + D W ++ + N + E+ +
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 542 VEA-DNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
+ NG ++ L + + G W E R MR
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/595 (28%), Positives = 292/595 (49%), Gaps = 69/595 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y K ++ A+ LFD RD+VS+N+M+S YA + L L RM+ D
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI-LKLLYRMRG--D 239
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D+ T L++S + + G+ +H +VKT D+ ++LI MY KCG +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
Y V D V W +I+G ++ G
Sbjct: 300 YRVLETIPN---------------------------------KDVVCWTVMISGLMRLGR 326
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E+AL +F EM++ G + + +ASV+++C L LG VH VL++
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH----------- 375
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
G + +P A +SLI Y+ G++ K+ +F+ ++ER+ V W
Sbjct: 376 -------------------GYTLDTP-ALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
A+ SGY ++ LF E + D+ +V++L AC+ L +GK H ++
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
R+ + + +ALVDMYSKCG + A++ F + S +DV+ + ++IAGY HG + A
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI--SWKDVVSWGILIAGYGFHGKGDIA 533
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++++ E L ++P+ + F+A+LS+C H G+V+ G K F SM D+ V P H AC+VD
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+ R ++E A +F ++ + + G L+AC+ N T + E++++++ +
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGH 653
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
YV+L + +AA +W+++ +MR KLPG S I + F TSHS
Sbjct: 654 YVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 43/354 (12%)
Query: 171 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 230
N T +N+ I +G ++ L+ F M+ + + T S+L AC L+ L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 231 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
+H VL N S+ ++SS +V+ Y K G + +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAH---------------------------- 99
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL- 349
A+++F+ + ER+ V WTA+ Y ++ L E R + + P + ++ +L
Sbjct: 100 ---ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR-FQGIKPGPVTLLEMLS 155
Query: 350 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 409
G I L H + + + D + ++++++Y KC ++ A+ F + RD
Sbjct: 156 GVLEITQLQCL----HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM--EQRD 209
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 469
++ +N MI+GYA G ++ ++L M L+PD TF A LS +E+G
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 470 SM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ K ++V +++ ++ MY + + E + + IP + D W ++
Sbjct: 270 QIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISG 320
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
L+PDT ++L ACA LS G H +L + D ++S+LV++Y+K G +A+A
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
K F+ + +RDV+ + MI Y+ G +A L EM +KP +T + +LS
Sbjct: 102 KVFEEM--RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS---- 155
Query: 458 RGLVELGEKFFMSMKEDYNVLPEIYHYAC-------MVDMYGRGNQLEKAVEFMRKIPIQ 510
G++E+ + + D+ V IY + C M+++Y + + + A + ++ Q
Sbjct: 156 -GVLEITQ---LQCLHDFAV---IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME-Q 207
Query: 511 IDASIWGAFLNA-CKINNNTTLVK 533
D W ++ + N + ++K
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILK 231
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 272/547 (49%), Gaps = 41/547 (7%)
Query: 77 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 136
T ++ + ++ R + GK++H ++ + + L+ MY+KCGS +A VF
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 196
DL S N MV G ++ A +F + E D+ SW ++ GYV+ E AL L
Sbjct: 147 PNR-DLCSWNVMVNGYAEVGLLEEARKLFDEMTE-KDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 197 FIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
+ M N T++ ++A +KC++ GK +H +++ S++ + S ++D Y
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
KCG + +A+ +FD + E++ V WT++
Sbjct: 265 KCGCI-------------------------------DEARNIFDKIVEKDVVSWTSMIDR 293
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
Y KS + F LF E P+ VL ACA T LGKQ H Y+ R +
Sbjct: 294 YFKSSRWREGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 376 DEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIAGYAHHGFENKAIQLF 433
+S+LVDMY+KCGNI A+ V D D++ + +I G A +G ++A++ F
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKH----VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 434 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 493
+LK KPD +TFV +LSAC H GLVE G +FF S+ E + + HY C+VD+ R
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 494 GNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL 553
+ E+ + ++P++ +W + L C N L ++A +EL K+E +N YV +
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 528
Query: 554 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
AN+YAA GKW E G++RK M+ TK PG SW ++ HVF + DTSH + I L
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFL 588
Query: 614 VCLYGKL 620
L K+
Sbjct: 589 RELRKKM 595
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 212/511 (41%), Gaps = 112/511 (21%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT--VAL 58
MP+R+ SWN ++ Y + L +AR LFD + +D S+ +M++ Y D + V
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
L R+ ++R I T++ + +A ++ + GK++H ++V+ D + SSL+D
Sbjct: 206 SLMQRVPNSRPNI----FTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
MY KCG EA N+F D +V+ D VSW
Sbjct: 262 MYGKCGCIDEARNIF---DKIVE------------------------------KDVVSWT 288
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
++I Y ++ +LF E++ N++T A VL+AC L +LGK VH + +
Sbjct: 289 SMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV 348
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
F SS +VD Y KCGN+ A+ V G + +SLI G + G +A + F
Sbjct: 349 GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
D L L SG PD + VNVL AC +
Sbjct: 409 DLL----------LKSG----------------------TKPDHVTFVNVLSACTHAGLV 436
Query: 359 SLGKQ-THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
G + ++ + +L+ + LVD+ ++ G
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR------------------------- 471
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
FE QL + ++ +KP + ++L C G ++L E+ + +E + +
Sbjct: 472 -------FE----QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEE---AAQELFKI 517
Query: 478 LPE-IYHYACMVDMYGRGNQLEKAVEFMRKI 507
PE Y M ++Y + E+ + +++
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
++ L ++++ + + T +++ C+ + L+ GK VH + + + + +
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
+ Y KCG++ A V+ + + + + ++ GY+ G + +A++LFD ++E++ WT
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
A+ +GYVK Q E L+ + P+ + + A A + GK+ H +I+R
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
L+ DE L S+L+DMY KCG I A F + ++DV+ + MI Y +
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV--EKDVVSWTSMIDRYFKSSRWREGF 304
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
LF E++ +P+ TF +L+AC ELG++ M P + + +VDM
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDM 363
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 550
Y + +E A + P + D W + + C N + + LLK + +
Sbjct: 364 YTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK--SGTKPDH 420
Query: 551 VQLANVYAA 559
V NV +A
Sbjct: 421 VTFVNVLSA 429
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 183/673 (27%), Positives = 318/673 (47%), Gaps = 110/673 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ ++ N +I Y++ +L QAR +FD HR++VSYN++ SAY+ + A L M
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
A + + + T T+++ + A L V G ++S ++K + +S++ MYS CG
Sbjct: 191 --AFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A +F C + + D V+WNT+I G
Sbjct: 249 DLESARRIFD------------------CVNNR---------------DAVAWNTMIVGS 275
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++N +E L F M+ G++ Q T + VL+ C+ L LGK +HA ++ +D ++
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL--- 301
+ + ++D YC CG+MR A V+ I + + +S+I+G S G +A ++ L
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 302 -------------------------------------SERNYVVWTALCSGYVKSQQCEA 324
ER+ V T L S Y K+++ E+
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 325 VFKLFREFRTTEALIPDTMII------------------------------VNVLGACAI 354
K+F + + ++ MI+ +V+GAC+
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
A L G+ H +RT + + ALVDMY K G AE F L S+ D+ +N
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA--SNPDLKCWN 573
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
M+ Y+ HG KA+ F+++L+ PDA+T+++LL+AC HRG G+ + MKE
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ 633
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI-QIDASIWGAFLNACKINNNTTLVK 533
+ HY+CMV++ + +++A+E + + P A +W L+AC N +
Sbjct: 634 -GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV-ENG 592
A E++LK++ ++ + ++ L+N+YA G+W ++ +R+++RG ++K PG SWI V N
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNN 752
Query: 593 IHVFTSGDTSHSK 605
VF+SGD S+ +
Sbjct: 753 TQVFSSGDQSNPE 765
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 145/304 (47%), Gaps = 25/304 (8%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
N LI+ YV+ +E+A +F +M ++ I ++ + + +G +H+ ++K
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNI-------VTLFGLSAVFEYVSMGSSLHSQIIK 78
Query: 238 NDGCSNQF------VSSGIVDFYCKCGN---MRYAESVYA-------GIGIKSPFATSSL 281
F ++S +V+ KC + ++ A ++A G +SP+A ++L
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 282 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
I+ Y G++ +A+++FD + RN V + AL S Y ++ + E + P+
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 401
+ +++ CA+ + +G ++ I++ + + + ++++ MYS CG++ A + F
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
V ++RD + +N MI G + + F+ ML + P T+ +L+ C G
Sbjct: 259 CV--NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 462 ELGE 465
LG+
Sbjct: 317 SLGK 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
P+A ++LI+ Y ++ +A+++FD + +RN V L + + ++ + +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 335 TEAL--IPDTMI---IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA---LVDM 386
+ + +P I +V + C L +Q HA +L + A L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 387 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG-FENKAIQLFQEMLKISLKPDA 445
Y +CG++ A K F + R+V+ YN + + Y+ + F + A L M +KP++
Sbjct: 142 YVRCGSLEQARKVFDKMP--HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 446 ITFVALLSAC 455
TF +L+ C
Sbjct: 200 STFTSLVQVC 209
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 304/609 (49%), Gaps = 82/609 (13%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY-AGADGCDTVALDLFARMQSAR 68
N++I Y+K A +F+ RD+VS+NSM+S Y A DG + L LF M
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS--LMLFKEMLKC- 225
Query: 69 DTIGMDEITLTTMLNLSAKLRVVC--YGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGS 125
G +TM L A V GK++H + V++ + ++S++DMYSK G
Sbjct: 226 ---GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGE 282
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 185
A +F+G ++ +N V+WN +I Y
Sbjct: 283 VSYAERIFNG------MIQRN---------------------------IVAWNVMIGCYA 309
Query: 186 QNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+NG + A F +M E+ G++ + T ++L A L+ G+ +H ++ +
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHM 365
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+ + ++D Y +CG ++ AE + FD ++E+
Sbjct: 366 VLETALIDMYGECGQLKSAEVI-------------------------------FDRMAEK 394
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N + W ++ + YV++ + + +LF+E + +L+PD+ I ++L A A +LS G++
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDS-SLVPDSTTIASILPAYAESLSLSEGREI 453
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
HAYI++++ + + ++LV MY+ CG++ A K F + +DV+ +N +I YA HG
Sbjct: 454 HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL--KDVVSWNSIIMAYAVHG 511
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
F ++ LF EM+ + P+ TF +LL+AC G+V+ G ++F SMK +Y + P I HY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
CM+D+ GR A F+ ++P A IWG+ LNA + + + T+ + A E++ K+E
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEH 631
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
DN YV L N+YA G+W ++ RI+ M K ++ S + + HVFT+GD SH
Sbjct: 632 DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHV 691
Query: 605 KADAIYSTL 613
+ IY L
Sbjct: 692 ATNKIYEVL 700
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 192/434 (44%), Gaps = 74/434 (17%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
+ A LFD + D +N M+ + G A+ ++RM A + D T +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSC-GLYIEAVQFYSRMVFA--GVKADTFTYPFV 136
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+ A + + GK++H+ ++K + +SLI +Y K G
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG----------------- 179
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
C D A VF + PE D VSWN++I+GY+ G +L LF EM+
Sbjct: 180 ----------CAWD-----AEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND-GCSNQFVSSGIVDFYCKCGNM 260
+ G + ++ + S L AC+ + K+GK +H +++ + V + I+D Y K G +
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
YAE R+F+ + +RN V W + Y ++
Sbjct: 284 SYAE-------------------------------RIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+ F F++ L PD + +N+L A AI G+ H Y +R L
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLE 368
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+AL+DMY +CG + AE F + ++++VI +N +IA Y +G A++LFQE+ S
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRM--AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 441 LKPDAITFVALLSA 454
L PD+ T ++L A
Sbjct: 427 LVPDSTTIASILPA 440
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 15/323 (4%)
Query: 213 ASVLSACTGLKCLKLGKCV----HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
A++LS C + KCV H K +G N SGI K + +
Sbjct: 3 ATLLSQCYRIYNSDACKCVSSENHQTTGKRNGNRNLEFDSGI----SKPARLVLRDRYKV 58
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-SQQCEAVFK 327
+ P T +L G++ M A +LFD +++ + +W + G+ EAV
Sbjct: 59 TKQVNDPALTRAL-RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV-- 115
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 387
F + DT V+ + A ++L GK+ HA +++ D + ++L+ +Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 388 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
K G AEK F+ + +RD++ +N MI+GY G ++ LF+EMLK KPD +
Sbjct: 176 MKLGCAWDAEKVFEEM--PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 448 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
++ L AC H ++G++ ++ ++DMY + ++ A +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 508 PIQIDASIWGAFLNACKINNNTT 530
IQ + W + N T
Sbjct: 294 -IQRNIVAWNVMIGCYARNGRVT 315
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 292/609 (47%), Gaps = 70/609 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
NAF A+I AY ++ AR +F+ +D+V + ++S Y +G +L L + M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV-ENGYFEDSLKLLSCM 238
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ A + T T L S L + K +H ++KT L L+ +Y++ G
Sbjct: 239 RMA--GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG 296
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+A+ VF N M P+ ND V W+ +IA +
Sbjct: 297 DMSDAFKVF------------NEM--------------------PK-NDVVPWSFMIARF 323
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
QNG+ A+ LFI M E + N+ TL+S+L+ C KC LG+ +H LV+K +
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+VS+ ++D Y KC M A +LF LS +
Sbjct: 384 YVSNALIDVYAKCEKM-------------------------------DTAVKLFAELSSK 412
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N V W + GY + F +FRE + + + + + LGACA A++ LG Q
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE-VTFSSALGACASLASMDLGVQV 471
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H ++T ++++L+DMY+KCG+I +A+ F + D V +N +I+GY+ HG
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNALISGYSTHG 529
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
+A+++ M KP+ +TF+ +LS C + GL++ G++ F SM D+ + P + HY
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY 589
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
CMV + GR QL+KA++ + IP + IW A L+A NN +++ EE+LK+
Sbjct: 590 TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINP 649
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
+ + YV ++N+YA +W + IRK M+ K PG SWI + +H F+ G + H
Sbjct: 650 KDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHP 709
Query: 605 KADAIYSTL 613
I L
Sbjct: 710 DMKLINGML 718
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
+DL + N ++ A + G ALN+F + PE N+ VS+ TL GY + + L+
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNN-VSFVTLAQGYA----CQDPIGLYSR 136
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
+ +G E N H S L L ++ +H+ ++K SN FV + +++ Y CG+
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A +V+ GI K + VVW + S YV++
Sbjct: 197 VDSARTVFEGILCK-------------------------------DIVVWAGIVSCYVEN 225
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
E KL R +P+ L A K H IL+T +D ++
Sbjct: 226 GYFEDSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
L+ +Y++ G+++ A K F + + DV+ ++ MIA + +GF N+A+ LF M +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLE 498
+ P+ T ++L+ C LGE+ + +K +++ +IY ++D+Y + +++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL--DIYVSNALIDVYAKCEKMD 400
Query: 499 KAVEFMRKI 507
AV+ ++
Sbjct: 401 TAVKLFAEL 409
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 188/672 (27%), Positives = 330/672 (49%), Gaps = 89/672 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ +WN I+M +++ N +A LF R++ ++GA D+
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELF-----REM--------QFSGAKAYDS----- 90
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
T+ +L + + G+Q+H Y+++ + + +SLI MY
Sbjct: 91 ----------------TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY 134
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF----NDTVS 176
S+ G + VF+ +L S N+++++ + G +D A+ + E D V+
Sbjct: 135 SRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVDDAIGLL-DEMEICGLKPDIVT 192
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN+L++GY G + A+ + M G++ + +++S+L A LKLGK +H +L
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVY---------------AGI----------- 270
+N + +V + ++D Y K G + YA V+ +G+
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 271 --------GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYV 317
GIK T +SL +GY++ G KA + + E+ N V WTA+ SG
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
K+ K+F + + E + P+ + +L + L GK+ H + LR L D
Sbjct: 373 KNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA 431
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+A+ALVDMY K G++ A + F + ++ + +N M+ GYA G + I F ML
Sbjct: 432 YVATALVDMYGKSGDLQSAIEIFWGI--KNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ ++PDAITF ++LS C++ GLV+ G K+F M+ Y ++P I H +CMVD+ GR L
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
++A +F++ + ++ DA+IWGAFL++CKI+ + L + A + L +E N + Y+ + N+Y
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 558 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLY 617
+ +W ++ RIR MR SWI ++ +H+F + +H IY
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF------ 663
Query: 618 GKLYLTFTELKQ 629
+LY +E+K+
Sbjct: 664 -ELYKLVSEMKK 674
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
A +LFD + +R+ + W + ++S E +LFRE + + A D+ +V +L C+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCS 100
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
+ + G+Q H Y+LR L + + ++L+ MYS+ G + + K F + DR++ +
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFN--SMKDRNLSSW 158
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
N +++ Y G+ + AI L EM LKPD +T+ +LLS +GL
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 308/610 (50%), Gaps = 52/610 (8%)
Query: 19 AHNLTQARALF-DSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEIT 77
NL A+ LF + + ++ YN+M+SA + + L++ M R + D T
Sbjct: 81 PENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSK---NECFGLYSSM--IRHRVSPDRQT 135
Query: 78 LTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYSKCGSFREAYNVFSGC 136
++ S+ L V KQ+H +++ + L + +SL+ Y + G+F A VF+
Sbjct: 136 FLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFA-- 190
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 196
+ P D S+N +I GY + G+ AL L
Sbjct: 191 ------------------------------RMPH-PDVSSFNVMIVGYAKQGFSLEALKL 219
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC--SNQFVSSGIVDFY 254
+ +M+ GIE +++T+ S+L C L ++LGK VH + + SN +S+ ++D Y
Sbjct: 220 YFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY 279
Query: 255 CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS 314
KC A+ + + K + ++++ G+ G+M A+ +FD + +R+ V W +L
Sbjct: 280 FKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLF 339
Query: 315 GYVKSQQCE--AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
GY K + C+ V +LF E E + PD + +V+++ A LS G+ H ++R +
Sbjct: 340 GYSK-KGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ 398
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
L D L+SAL+DMY KCG I A F+ T +++DV L+ MI G A HG +A+QL
Sbjct: 399 LKGDAFLSSALIDMYCKCGIIERAFMVFK--TATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F M + + P+ +T +A+L+AC H GLVE G F MK+ + PE HY +VD+
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLC 516
Query: 493 RGNQLEKAVEFM-RKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 551
R ++E+A + + +K+P++ S+WG+ L+AC+ + + A ELLK+E + YV
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYV 576
Query: 552 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD-TSHSKADAIY 610
L+N+YA G+W + R+ M + K G S + G+H F + + +H + I
Sbjct: 577 LLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIK 636
Query: 611 STLVCLYGKL 620
L LY ++
Sbjct: 637 RILQHLYNEM 646
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 181/401 (45%), Gaps = 44/401 (10%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
+ WN+++ Y++ N A +F H D+ S+N M+ YA G AL L+ +M S
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA-KQGFSLEALKLYFKMVS 225
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS--LIDMYSKCG 124
D I DE T+ ++L L + GK +H ++ + S + S L+DMY KC
Sbjct: 226 --DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A F D+ S N MV R G M+ A VF + P+ D VSWN+L+ GY
Sbjct: 284 ESGLAKRAFDAMKK-KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK-RDLVSWNSLLFGY 341
Query: 185 VQNGYMERAL-TLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
+ G +R + LF EM I + ++ ++ T+ S++S L G+ VH LV++
Sbjct: 342 SKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG 401
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ F+SS ++D YCKCG + A V+ K +S+I G + GN +A +LF +
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E E + P+ + ++ VL AC+ + G
Sbjct: 462 E--------------------------------EGVTPNNVTLLAVLTACSHSGLVEEGL 489
Query: 363 QTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQ 401
+ ++ K D + +LVD+ + G + A+ Q
Sbjct: 490 HVFNH-MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVAL-D 59
M ++ SWN +++ +++ ++ A+A+FD RDLVS+NS+L Y+ GCD + +
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS-KKGCDQRTVRE 353
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
LF M + + + D +T+ ++++ +A + +G+ +H +++ F S+LIDM
Sbjct: 354 LFYEM-TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDM 412
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y KCG A+ VF K D W +
Sbjct: 413 YCKCGIIERAFMVF---------------------------------KTATEKDVALWTS 439
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
+I G +G ++AL LF M E+G+ N TL +VL+AC+ ++ G V +
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF 499
Query: 240 GCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
G + G +VD C+ G + A+ + + K P S + G
Sbjct: 500 GFDPETEHYGSLVDLLCRAGRVEEAKDI---VQKKMPMRPSQSMWG 542
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 273/553 (49%), Gaps = 78/553 (14%)
Query: 39 SYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMH 98
SYN++LS+YA CD + +FA + D T + K + GKQ+H
Sbjct: 73 SYNTLLSSYAV---CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 99 SYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM 158
+ K + +SL+ Y CG R A VF G+M
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVF----------------------GEM 167
Query: 159 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
+ D VSW +I G+ + G + AL F +M +E N T VL +
Sbjct: 168 PV-----------RDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVS 213
Query: 219 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 278
+ CL LGK +H L+LK + + ++D Y KC +
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQL------------------ 255
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
+ A R+F L +++ V W ++ SG V ++ + LF +T+ +
Sbjct: 256 -------------SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
PD I+ +VL ACA + G+ H YIL + D + +A+VDMY+KCG I A +
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 399 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
F + ++V +N ++ G A HG ++++ F+EM+K+ KP+ +TF+A L+AC H
Sbjct: 363 IFNGI--RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 459 GLVELGEKFFMSMK-EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWG 517
GLV+ G ++F MK +YN+ P++ HY CM+D+ R L++A+E ++ +P++ D I G
Sbjct: 421 GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICG 480
Query: 518 AFLNACKINNNTTLVKQAEEEL---LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
A L+ACK N TL++ +E L L +E ++ YV L+N++AA +W+++ RIR+ M+
Sbjct: 481 AILSACK--NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMK 538
Query: 575 GKEATKLPGCSWI 587
K +K+PG S+I
Sbjct: 539 VKGISKVPGSSYI 551
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA+I Y+K L+ A +F +D VS+NSM+S + A+DLF+ MQ++
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKE-AIDLFSLMQTS-S 300
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I D LT++L+ A L V +G+ +H Y++ ++++DMY+KCG A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F+G + SKN +WN L+ G +G+
Sbjct: 361 LEIFNG------IRSKNVF---------------------------TWNALLGGLAIHGH 387
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSAC--TGL 222
+L F EM++ G + N T + L+AC TGL
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 282/518 (54%), Gaps = 12/518 (2%)
Query: 102 VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVV-DLVSKNAMVAACC-RDGK 157
+ ++ LS LID ++C + RE + + G++ D V+ + ++A CC
Sbjct: 16 MPSSGSLSGNTYLRLID--TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSD 73
Query: 158 MDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI--EKGIEYNQHTLASV 215
M+ A VF + N V WNT+I G+ ++ + E A+++FI+M+ ++ + T SV
Sbjct: 74 MNYAYLVFTRINHKNPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
A L + G+ +H +V+K + F+ + ++ Y CG + A ++ G+
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
A +S+I G++ G + +A+ LFD + +RN V W ++ SG+V++ + + +FRE +
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 336 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
+ + PD +V++L ACA G+ H YI+R + ++ + +AL+DMY KCG I
Sbjct: 253 D-VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 396 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
F+ + + +N MI G A++GFE +A+ LF E+ + L+PD+++F+ +L+AC
Sbjct: 312 GLNVFECA--PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 456 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASI 515
H G V ++FF MKE Y + P I HY MV++ G LE+A ++ +P++ D I
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI 429
Query: 516 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRG 575
W + L+AC+ N + K+A + L K++ D YV L+N YA+ G + E R M+
Sbjct: 430 WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Query: 576 KEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
++ K GCS I V+ +H F S +H K+ IYS L
Sbjct: 490 RQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 211/419 (50%), Gaps = 17/419 (4%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
++ A +F +H++ +N+++ ++ + + +A+ +F M + ++ +T +
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPE-MAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+ +L G+Q+H ++K + F ++++ MY CG EA+ +F G G
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG-F 190
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
D+V+ N+M+ + G +D A N+F + P+ N VSWN++I+G+V+NG + AL +F EM
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG-VSWNSMISGFVRNGRFKDALDMFREM 249
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
EK ++ + T+ S+L+AC L + G+ +H +++N N V + ++D YCKCG +
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTAL---C 313
+V+ K +S+I G ++ G +A LF L E + V + + C
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
+ + + + F+L +E E I ++VNVLG L ++ A I +
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAG------LLEEAEALIKNMPV 423
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA-GYAHHGFENKAIQ 431
D + S+L+ K GN+ A+++ + + D D V+++ YA +G +A++
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ +WN++IM + K + QA+ LFD R+ VS+NSM+S + +G ALD+F M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFV-RNGRFKDALDMFREM 249
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
Q + D T+ ++LN A L G+ +H Y+V+ +L+ +++LIDMY KCG
Sbjct: 250 Q--EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
E NVF C ++ WN++I G
Sbjct: 308 CIEEGLNVFE-----------------CAPKKQLS----------------CWNSMILGL 334
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 219
NG+ ERA+ LF E+ G+E + + VL+AC
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 265/484 (54%), Gaps = 46/484 (9%)
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 198
+V L S M A K++ +NVF WNTLI GY + G A +L+
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFI----------WNTLIRGYAEIGNSISAFSLYR 109
Query: 199 EMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
EM G +E + HT ++ A T + ++LG+ +H++V+++ S +V + ++ Y C
Sbjct: 110 EMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC 169
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
G++ A ++FD + E++ V W ++ +G+
Sbjct: 170 GDV-------------------------------ASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
++ + E L+ E ++ + PD IV++L ACA L+LGK+ H Y+++ L +
Sbjct: 199 ENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
++ L+D+Y++CG + A+ F + D ++ + + +I G A +GF +AI+LF+ M
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 438 KIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 496
L P ITFV +L AC H G+V+ G ++F M+E+Y + P I H+ CMVD+ R Q
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 497 LEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 556
++KA E+++ +P+Q + IW L AC ++ ++ L + A ++L++E ++ YV L+N+
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
Query: 557 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
YA+E +W+++ +IRK+M K+PG S + V N +H F GD SH ++DAIY+ L +
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
Query: 617 YGKL 620
G+L
Sbjct: 496 TGRL 499
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 262 YAESVYAGIGIKSPFATSSLI---AGYSSKGNMTKAKRLFDSLSER-NYVVWTALCSGYV 317
+A S+ G+ I LI S M+ A ++F + + N +W L GY
Sbjct: 37 HAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYA 96
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
+ + F L+RE R + + PDT ++ A A + LG+ H+ ++R+
Sbjct: 97 EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLI 156
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ ++L+ +Y+ CG++A A K F + ++D++ +N +I G+A +G +A+ L+ EM
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKM--PEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+KPD T V+LLSAC G + LG++ + M + + ++ ++D+Y R ++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRV 273
Query: 498 EKA 500
E+A
Sbjct: 274 EEA 276
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y ++ A +FD +DLV++NS+++ +A +G AL L+ M S
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA-ENGKPEEALALYTEMNS--K 216
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I D T+ ++L+ AK+ + GK++H YM+K + + + L+D+Y++CG EA
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F ++V KN +VSW +LI G NG+
Sbjct: 277 KTLFD------EMVDKN---------------------------SVSWTSLIVGLAVNGF 303
Query: 190 MERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLG 228
+ A+ LF M +G+ + T +L AC+ +K G
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 303/610 (49%), Gaps = 51/610 (8%)
Query: 13 IMAYIKAHNL-TQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ + A NL +A+++ +++ + +N ++++YA + + V + + RM S I
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEV-IAAYKRMVS--KGI 140
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D T ++L + V +G+ +H + ++ S + ++LI MY + + A
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 132 VFSGCDGVV--DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQ 186
+F D + D VS NA++ +G A +F W + ++WN + G +Q
Sbjct: 201 LF---DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN--DGCSNQ 244
G AL L M + + L AC+ + ++LGK +H L + + DG N
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN- 316
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
V + ++ Y KC ++R+A V F E
Sbjct: 317 -VRNTLITMYSKCKDLRHALIV-------------------------------FRQTEEN 344
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
+ W ++ SGY + + E L RE P+++ + ++L CA A L GK+
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREM-LVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 365 HAYILRTKLNMD-EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H YILR K D L ++LVD+Y+K G I A++ L+ S RD + Y +I GY +
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM--SKRDEVTYTSLIDGYGNQ 461
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G A+ LF+EM + +KPD +T VA+LSAC H LV GE+ FM M+ +Y + P + H
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
++CMVD+YGR L KA + + +P + + W LNAC I+ NT + K A E+LL+++
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK 581
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
+N YV +AN+YAA G W+++ +R MR K PGC+WI ++G +F+ GDTS
Sbjct: 582 PENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSS 641
Query: 604 SKADAIYSTL 613
+A Y L
Sbjct: 642 PEACNTYPLL 651
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/582 (21%), Positives = 242/582 (41%), Gaps = 97/582 (16%)
Query: 63 RMQSARDTIGMDEITL---TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
R+QS+ D++ L ++L+ +R G Q+H++ + + + + L+
Sbjct: 30 RLQSSSAV--SDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTF 87
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
YS A+N+ + +++ N + + WN
Sbjct: 88 YS-------AFNLHNEAQSIIE--------------------------NSDILHPLPWNV 114
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
LIA Y +N E + + M+ KGI + T SVL AC + G+ VH + +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
S+ +V + ++ Y + NM A ++ + + + +++I Y+S+G ++A LFD
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFD 234
Query: 300 SL----SERNYVVWTALCSGYVKSQQCEAVFKLFREFRT-TEALIPDTMIIVNVLGACAI 354
+ E + + W + G +++ L R +L P MII L AC++
Sbjct: 235 KMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII--GLKACSL 292
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
+ LGK+ H + + + + + + L+ MYSKC ++ +A F+ + + +N
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR--QTEENSLCTWN 350
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF------- 467
+I+GYA +A L +EML +P++IT ++L C ++ G++F
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 468 --FMSMKEDYNVLPEIY----------------------HYACMVDMYGRGNQLEKAVEF 503
F +N L ++Y Y ++D G GNQ E V
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID--GYGNQGEGGVAL 468
Query: 504 -----MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR-----YVQL 553
M + I+ D A L+AC +++ LV + E +K++ + G R + +
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSAC---SHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 554 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
++Y G + I M K + G +W + N H+
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPS----GATWATLLNACHI 563
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 208/550 (37%), Gaps = 158/550 (28%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAG-------------------- 49
NA+I Y + N+ AR LFD RD VS+N++++ YA
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 50 ---------ADGCDTV-----ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGK 95
+ GC AL L +RM++ + +D + + L + + + GK
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTS--LDPVAMIIGLKACSLIGAIRLGK 300
Query: 96 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRD 155
++H + ++ D ++LI MYSKC R A VF
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF---------------------- 338
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
+ E N +WN++I+GY Q E A L EM+ G + N TLAS+
Sbjct: 339 -----------RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASI 387
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
L C + L+ GK H +L+ C +
Sbjct: 388 LPLCARIANLQHGKEFHCYILRRK-CFKDYT----------------------------- 417
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
+SL+ Y+ G + AK++ D +S+R+ V +T+L GY + LF+E T
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM-TR 476
Query: 336 EALIPDTMIIVNVLGACAIQATLSLG-----KQTHAYILRTKLNMDEKLASALVDMYSKC 390
+ PD + +V VL AC+ + G K Y +R L + S +VD+Y +
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL----QHFSCMVDLYGRA 532
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G +A A+ I++N + KP T+
Sbjct: 533 GFLAKAKD------------IIHN------------------------MPYKPSGATWAT 556
Query: 451 LLSACRHRGLVELG----EKFFMSMKEDYNVLPEIYHYACMVDMY---GRGNQLEKAVEF 503
LL+AC G ++G EK E+ +Y + +MY G ++L +
Sbjct: 557 LLNACHIHGNTQIGKWAAEKLLEMKPENPG------YYVLIANMYAAAGSWSKLAEVRTI 610
Query: 504 MRKIPIQIDA 513
MR + ++ D
Sbjct: 611 MRDLGVKKDP 620
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 68
WN+++ Y K+ + A+ + D S RD V+Y S++ Y G G VAL LF M R
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY-GNQGEGGVALALFKEM--TR 476
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMH-----SYMVKTANDLSKFALSSLIDMYSKC 123
I D +T+ +L+ + ++V G+++ Y ++ L F S ++D+Y +
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPC--LQHF--SCMVDLYGRA 532
Query: 124 GSFREAYNVF 133
G +A ++
Sbjct: 533 GFLAKAKDII 542
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/618 (28%), Positives = 296/618 (47%), Gaps = 78/618 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+ F N +I Y K L QA +LFD RD VS+NS++S Y G L+L A+
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV-GAAEEPLNLLAK 239
Query: 64 MQSARDTIGMDEITLTTMLN---LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
M RD + + L ++L ++ + G +H Y K + ++L+DMY
Sbjct: 240 MH--RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+K GS +E A+ +F P N V++N +
Sbjct: 298 AKNGSLKE--------------------------------AIKLFSLMPSKN-VVTYNAM 324
Query: 181 IAGYVQ-----NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
I+G++Q + A LF++M +G+E + T + VL AC+ K L+ G+ +HAL+
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
KN+ S++F+ S +++ Y G S++ M
Sbjct: 385 CKNNFQSDEFIGSALIELYALMG---------------------------STEDGM---- 413
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
+ F S S+++ WT++ +V+++Q E+ F LFR+ ++ + P+ + ++ ACA
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADF 472
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
A LS G+Q Y +++ ++ + ++ + MY+K GN+ A + F + + DV Y+
Sbjct: 473 AALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSA 530
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
MI+ A HG N+A+ +F+ M +KP+ F+ +L AC H GLV G K+F MK DY
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
+ P H+ C+VD+ GR +L A + Q W A L++C++ ++ + K+
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
E L+++E + YV L N+Y G + +R+ MR + K P SWI + N H
Sbjct: 651 AERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710
Query: 596 FTSGDTSHSKADAIYSTL 613
F D SH + IY+ L
Sbjct: 711 FAVADLSHPSSQMIYTML 728
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 201/466 (43%), Gaps = 107/466 (22%)
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+ +AK V GK H +M+K++ + + L++L++MY KC RE
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC---RE------------ 97
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
+ A +F + PE N +S+N+LI+GY Q G+ E+A+ LF+E
Sbjct: 98 -----------------LGFARQLFDRMPERN-IISFNSLISGYTQMGFYEQAMELFLEA 139
Query: 201 IEKGIEYNQHTLASVLSACTGLKC-LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
E ++ ++ T A L C G +C L LG+ +H LV+ N F+ + ++D Y KCG
Sbjct: 140 REANLKLDKFTYAGALGFC-GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGK 198
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A S LFD ER+ V W +L SGYV+
Sbjct: 199 LDQAMS-------------------------------LFDRCDERDQVSWNSLISGYVRV 227
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI---QATLSLGKQTHAYILRTKLNMD 376
E L + + L T + +VL AC I + + G H Y + + D
Sbjct: 228 GAAEEPLNLLAKMH-RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG-----FENKAIQ 431
+ +AL+DMY+K G++ A K F L+ ++V+ YN MI+G+ ++A +
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLM--PSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF--------FMSMKEDYNVLPEIY- 482
LF +M + L+P TF +L AC +E G + F S + + L E+Y
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 483 ---------------------HYACMVDMYGRGNQLEKAVEFMRKI 507
+ M+D + + QLE A + R++
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 13/221 (5%)
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
A++LFD + ERN + + +L SGY + E +LF E R L D LG C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCG 159
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
+ L LG+ H ++ L+ L + L+DMYSKCG + A F +RD + +
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC--DERDQVSW 217
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC---RHRGLVELGEK---F 467
N +I+GY G + + L +M + L ++L AC + G +E G +
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 468 FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
+ +++++ ++DMY + L++A++ +P
Sbjct: 278 TAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMP 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
A ++ LGK H +++++ LN L + L++MY KC + +A + F + + R++I
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE--RNIIS 115
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+N +I+GY GF +A++LF E + +LK D T+ L C R ++LGE +
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-LLHGLV 174
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ +++ ++DMY + +L++A+ + + D W + ++
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 294/592 (49%), Gaps = 69/592 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA++ Y K +T A+ +F +++++VS+N+M+ ++ A+G D+ +M + +
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS-AEGDTHGTFDVLRQMLAGGE 389
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ DE+T+ + + + K++H Y +K ++ ++ + Y+KCGS A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF G + SK SWN LI G+ Q+
Sbjct: 450 QRVFHG------IRSKTVN---------------------------SWNALIGGHAQSND 476
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+L ++M G+ + T+ S+LSAC+ LK L+LGK VH +++N + FV
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++ Y CG + + LFD++ +++ V W
Sbjct: 537 VLSLYIHCGEL-------------------------------CTVQALFDAMEDKSLVSW 565
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ +GY+++ + +FR+ + + ++ V GAC++ +L LG++ HAY L
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ L D +A +L+DMY+K G+I + K F + ++ +N MI GY HG +A
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGLAKEA 682
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
I+LF+EM + PD +TF+ +L+AC H GL+ G ++ MK + + P + HYAC++D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 490 MYGRGNQLEKAVEFM-RKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
M GR QL+KA+ + ++ + D IW + L++C+I+ N + ++ +L ++E +
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
YV L+N+YA GKW ++ ++R+ M K GCSWI + + F G+
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 193/440 (43%), Gaps = 96/440 (21%)
Query: 53 CDTVALDLFARMQSARDTIGMDEIT----------LTTMLNLSAKLRVVCYGKQMHSYM- 101
C+T LD ++ ++ +G DE + L +L S K + + G+++H +
Sbjct: 54 CETGDLD--KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVS 111
Query: 102 --VKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 159
+ ND + +I MY+ CGS ++ VF L SKN
Sbjct: 112 GSTRLRND--DVLCTRIITMYAMCGSPDDSRFVFDA------LRSKNLF----------- 152
Query: 160 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH-TLASVLSA 218
WN +I+ Y +N + L FIEMI H T V+ A
Sbjct: 153 ----------------QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA 196
Query: 219 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 278
C G+ + +G VH LV+K +G+V E V+ G
Sbjct: 197 CAGMSDVGIGLAVHGLVVK----------TGLV------------EDVFVG--------- 225
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE-- 336
++L++ Y + G +T A +LFD + ERN V W ++ + + E F L E
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 337 -ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
A +PD +V VL CA + + LGK H + ++ +L+ + L +AL+DMYSKCG I
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 396 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK--ISLKPDAITFVALLS 453
A+ F++ +++++V+ +N M+ G++ G + + ++ML +K D +T + +
Sbjct: 346 AQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 454 ACRHRGLVELGEKFFMSMKE 473
C H E F S+KE
Sbjct: 404 VCFH-------ESFLPSLKE 416
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 63/346 (18%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ F + +++ YI L +ALFD+ + LVS+N++++ Y +G AL +F +
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL-QNGFPDRALGVFRQ 587
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M I + I++ + + L + G++ H+Y +K + F SLIDMY+K
Sbjct: 588 M--VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
GS ++ VF+G L K+ T SWN +I G
Sbjct: 646 GSITQSSKVFNG------LKEKS---------------------------TASWNAMIMG 672
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHALV- 235
Y +G + A+ LF EM G + T VL+AC GL+ L K L
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 236 -LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY-------AGIGIKSPFATSSLIAGYSS 287
LK+ C ++D + G + A V A +GI +S I
Sbjct: 733 NLKHYAC--------VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Query: 288 KGNMTKAKRLFDSLSER--NYVVWTALCSGYVKSQQCEAVFKLFRE 331
G AK LF+ E+ NYV+ + L +G K + V + E
Sbjct: 785 MGEKVAAK-LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 270/535 (50%), Gaps = 69/535 (12%)
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+LN R + G+++H++M+KT + + + L+ Y KC +A V
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD------ 111
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
+ PE N VSW +I+ Y Q G+ ALT+F EM
Sbjct: 112 --------------------------EMPEKN-VVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ + N+ T A+VL++C L LGK +H L++K + S+ FV S ++D Y K
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--- 201
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
G + +A+ +F+ L ER+ V TA+ +GY +
Sbjct: 202 ----------------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
E ++F + E + P+ + ++L A + A L GKQ H ++LR +L L
Sbjct: 234 LDEEALEMFHRLHS-EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KI 439
++L+DMYSKCGN++YA + F + +R I +N M+ GY+ HG + ++LF+ M +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLE 498
+KPDA+T +A+LS C H + + G F M +Y P HY C+VDM GR +++
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 499 KAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 558
+A EF++++P + A + G+ L AC+++ + + + L+++E +N YV L+N+YA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 559 AEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+ G+W ++ +R M K TK PG SWI E +H F + D +H + + + + +
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 189/454 (41%), Gaps = 101/454 (22%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
+++ Y K L AR + D +++VS+ +M+S Y+ G + AL +FA M R
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS-QTGHSSEALTVFAEMM--RSDG 149
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
+E T T+L + + GKQ+H +VK D F SSL+DMY+K G +EA
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
+F C D+VS A +IAGY Q G E
Sbjct: 210 IFE-CLPERDVVSCTA--------------------------------IIAGYAQLGLDE 236
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
AL +F + +G+ N T AS+L+A +GL L GK H VL+ + + + ++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
D Y KCGN+ YA ++ D++ ER + W A
Sbjct: 297 DMYSKCGNLSYARRLF-------------------------------DNMPERTAISWNA 325
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ GY K V +LFR R + + PD + ++ VL C +H + T
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC-----------SHGRMEDT 374
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
LN+ + + + + +K G Y + D M+ G + +
Sbjct: 375 GLNIFDGMVAG--EYGTKPGTEHYG-----CIVD----------ML------GRAGRIDE 411
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
F+ + ++ KP A +LL ACR V++GE
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F ++++ Y KA + +AR +F+ RD+VS ++++ YA G D AL++F R+ S
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFHRLHS 247
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ + + +T ++L + L ++ +GKQ H ++++ +SLIDMYSKCG+
Sbjct: 248 --EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
A +F PE +SWN ++ GY +
Sbjct: 306 SYARRLFDNM--------------------------------PE-RTAISWNAMLVGYSK 332
Query: 187 NGYMERALTLFIEMI-EKGIEYNQHTLASVLSACT 220
+G L LF M EK ++ + TL +VLS C+
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/618 (29%), Positives = 318/618 (51%), Gaps = 25/618 (4%)
Query: 12 IIMAYIKAHNLTQARALFDSASH---RDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 68
+I Y + L AR +F++ S DL +NS+L A + G AL+L+ M+ R
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV-SHGLYENALELYRGMRQ-R 152
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
G D L +L L + H+ +++ + ++ L+ +Y K G +
Sbjct: 153 GLTG-DGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF-W-KNPEFN-DTVSWNTLIAGYV 185
AYN+F V + +S N M+ ++ + A+ +F W + EF D V+W ++++ +
Sbjct: 212 AYNLFVEMP-VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
Q G E L F M G + LA S C L+ L + + VH V+K G ++
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIK--GGFEEY 328
Query: 246 VSS--GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ S ++ Y K G ++ AE ++ I K + +SLI + G + +A LF L E
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 304 RNYV--------VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
N+V WT++ G + + + FR+ + ++ L +++ I +L CA
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL-ANSVTICCILSICAEL 447
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
L+LG++ H +++RT ++ + + +ALV+MY+KCG ++ F+ + D +D+I +N
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD--KDLISWNS 505
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
+I GY HGF KA+ +F M+ PD I VA+LSAC H GLVE G + F SM + +
Sbjct: 506 IIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRF 565
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
+ P+ HYAC+VD+ GR L++A E ++ +P++ + GA LN+C+++ N + +
Sbjct: 566 GLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGI 625
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
+L +E + Y+ L+N+Y+A G+W E +R + K+ K+ G SWI V+ +
Sbjct: 626 ASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYK 685
Query: 596 FTSGDTSHSKADAIYSTL 613
F+SG S+ + IY L
Sbjct: 686 FSSGSIVQSEFETIYPVL 703
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 184/432 (42%), Gaps = 79/432 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y KA + A LF R+ +S+N M+ ++ C++ A+ +F MQ R+
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES-AVKIFEWMQ--RE 253
Query: 70 TIGMDEITLTTML-----------------------------------NLSAKLRVVCYG 94
DE+T T++L ++ A+L +
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 154
+++H Y++K + + ++LI +Y K G ++A ++F + S N+++ +
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN-KGIESWNSLITSFVD 372
Query: 155 DGKMDMALNVFWKNPEFN-------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 207
GK+D AL++F + E N + V+W ++I G G + +L F +M +
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 208 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 267
N T+ +LS C L L LG+ +H V++ N V + +V+ Y KCG + V+
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 268 AGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFK 327
I K + +S+I GY G KA +FD + + SG+
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM----------ISSGFH---------- 532
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKLASALVDM 386
PD + +V VL AC+ + G++ ++ R L ++ + +VD+
Sbjct: 533 ------------PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDL 580
Query: 387 YSKCGNIAYAEK 398
+ G + A +
Sbjct: 581 LGRVGFLKEASE 592
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 74/298 (24%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGA----------------- 50
S NA+I Y K + A LF ++ + S+NS+++++ A
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 51 ----------------DGCDTV-----ALDLFARMQSARDTIGMDEITLTTMLNLSAKLR 89
GC+ +L+ F +MQ ++ + + +T+ +L++ A+L
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK--VLANSVTICCILSICAELP 448
Query: 90 VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMV 149
+ G+++H ++++T+ + ++L++MY+KCG L+S+ ++V
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG-----------------LLSEGSLV 491
Query: 150 AACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 209
RD D +SWN++I GY +G+ E+AL++F MI G +
Sbjct: 492 FEAIRD----------------KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 210 HTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYCKCGNMRYAESV 266
L +VLSAC+ ++ G+ + + K G Q IVD + G ++ A +
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/612 (28%), Positives = 295/612 (48%), Gaps = 73/612 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F A + ++K +++ A +F+ RD ++N+MLS + + D A LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK-AFSLFREM 144
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + I D +T+ T++ ++ + + + MH+ ++ D+ ++ I Y KCG
Sbjct: 145 R--LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A VF D R + VSWN++ Y
Sbjct: 203 DLDSAKLVFEAID----------------RGDRT---------------VVSWNSMFKAY 231
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
G A L+ M+ + + + T ++ ++C + L G+ +H+
Sbjct: 232 SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS----------- 280
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+++ G + A ++ I+ YS + A+ LFD ++ R
Sbjct: 281 -------------------HAIHLGTD-QDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFRE-FRTTEALIPDTMIIVNVLGACAIQATLSLGK- 362
V WT + SGY + + LF ++ E PD + +++++ C +L GK
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK--PDLVTLLSLISGCGKFGSLETGKW 378
Query: 363 -QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
A I K + + + +AL+DMYSKCG+I A F ++ V+ + MIAGYA
Sbjct: 379 IDARADIYGCKRD-NVMICNALIDMYSKCGSIHEARDIFD--NTPEKTVVTWTTMIAGYA 435
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
+G +A++LF +M+ + KP+ ITF+A+L AC H G +E G ++F MK+ YN+ P +
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
HY+CMVD+ GR +LE+A+E +R + + DA IWGA LNACKI+ N + +QA E L
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN 555
Query: 542 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT 601
+E + YV++AN+YAA G W+ RIR M+ + K PG S I V H FT G+
Sbjct: 556 LEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEH 615
Query: 602 SHSKADAIYSTL 613
H + + IY TL
Sbjct: 616 GHVENEVIYFTL 627
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 32/282 (11%)
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
+WN I V +L LF EM G E N T V AC L + + VHA +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
+K+ S+ FV + VD + KC ++ YA V
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKV----------------------------- 109
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
F+ + ER+ W A+ SG+ +S + F LFRE R E + PD++ ++ ++ + + +
Sbjct: 110 --FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFE 166
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+L L + HA +R +++ +A+ + Y KCG++ A+ F+ + DR V+ +N
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
M Y+ G A L+ ML+ KPD TF+ L ++C++
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 387
LFRE + P+ V ACA A + + HA+++++ D + +A VDM+
Sbjct: 39 LFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF 97
Query: 388 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
KC ++ YA K F+ + +RD +N M++G+ G +KA LF+EM + PD++T
Sbjct: 98 VKCNSVDYAAKVFERM--PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 448 FVALLSACRHRGLVELGE 465
+ L+ + ++L E
Sbjct: 156 VMTLIQSASFEKSLKLLE 173
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 295/593 (49%), Gaps = 82/593 (13%)
Query: 28 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 87
+F+ ++ NS++ A+A + A +F+ MQ R + D T +L +
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHA-QNSQPYQAFFVFSEMQ--RFGLFADNFTYPFLLKACSG 129
Query: 88 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 147
+ K MH+++ K + ++LID YS+CG GV D
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL-----------GVRD------ 172
Query: 148 MVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IE 206
A+ +F K E DTVSWN+++ G V+ G + A LF EM ++ I
Sbjct: 173 -------------AMKLFEKMSE-RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLIS 218
Query: 207 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 266
+N ++D Y +C M A +
Sbjct: 219 WNT----------------------------------------MLDGYARCREMSKAFEL 238
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKSQQCEA 324
+ + ++ + S+++ GYS G+M A+ +FD L +N V WT + +GY + +
Sbjct: 239 FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKE 298
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
+L + L D ++++L AC LSLG + H+ + R+ L + + +AL+
Sbjct: 299 ADRLVDQM-VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 385 DMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
DMY+KCGN+ +K+F + D +D++ +N M+ G HG +AI+LF M + ++P
Sbjct: 358 DMYAKCGNL---KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRP 414
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
D +TF+A+L +C H GL++ G +F SM++ Y+++P++ HY C+VD+ GR +L++A++
Sbjct: 415 DKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV 474
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
++ +P++ + IWGA L AC+++N + K+ + L+K++ + Y L+N+YAA W
Sbjct: 475 VQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534
Query: 564 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
+ IR +M+ K G S + +E+GIH FT D SH K+D IY L L
Sbjct: 535 EGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 172/380 (45%), Gaps = 47/380 (12%)
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
+ CR + ++A+ VF + E N + N+LI + QN +A +F EM G+ +
Sbjct: 62 SLCR--QTNLAVRVFNQVQEPNVHLC-NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNF 118
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM--RYAESVYA 268
T +L AC+G L + K +H + K S+ +V + ++D Y +CG + R A ++
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
+ + + +S++ G G + A+RLFD + +R+ + W + GY + ++ F+L
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
F + + TM V+G YS
Sbjct: 239 FEKMPERNTVSWSTM----VMG------------------------------------YS 258
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 448
K G++ A F + ++V+ + ++IAGYA G +A +L +M+ LK DA
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 449 VALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
+++L+AC GL+ LG + +K N+ Y ++DMY + L+KA + IP
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 509 IQIDASIWGAFLNACKINNN 528
+ D W L+ ++ +
Sbjct: 378 -KKDLVSWNTMLHGLGVHGH 396
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 38/222 (17%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFD--SASHRDLVSYNSMLSAYAGADGCDTVAL 58
MP RN SW+ ++M Y KA ++ AR +FD +++V++ +++ YA G A
Sbjct: 242 MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYA-EKGLLKEAD 300
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
L +M ++ + D + ++L + ++ G ++HS + ++ + + L++L+D
Sbjct: 301 RLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
MY+KCG+ ++A++VF+ D+ K D VSWN
Sbjct: 359 MYAKCGNLKKAFDVFN------DIPKK---------------------------DLVSWN 385
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
T++ G +G+ + A+ LF M +GI ++ T +VL +C
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 24/263 (9%)
Query: 256 KCGNMRYAESVYAGIGIKSPFA----TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
KC N+ + ++A I ++ LI+ S A R+F+ + E N + +
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
L + ++ Q F +F E + L D +L AC+ Q+ L + K H +I +
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRF-GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
L+ D + +AL+D YS+CG + + S+RD + +N M+ G G A +
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 432 LFQEMLKISLKPDAITFVALLSA---CRHRGLVELGEKFFMSMKEDYNVLPE--IYHYAC 486
LF EM + D I++ +L CR E+ + F E + +PE ++
Sbjct: 207 LFDEM----PQRDLISWNTMLDGYARCR-----EMSKAF-----ELFEKMPERNTVSWST 252
Query: 487 MVDMYGRGNQLEKAVEFMRKIPI 509
MV Y + +E A K+P+
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPL 275
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 186/643 (28%), Positives = 308/643 (47%), Gaps = 81/643 (12%)
Query: 16 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDE 75
Y K L A +FD R+ V++N+++ Y +G + A+ LF+ M+ + +
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV-QNGKNEEAIRLFSDMR--KQGVEPTR 274
Query: 76 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 135
+T++T L+ SA + V GKQ H+ + +L +SL++ Y K G A VF
Sbjct: 275 VTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD- 333
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 195
+F K D V+WN +I+GYVQ G +E A+
Sbjct: 334 ---------------------------RMFEK-----DVVTWNLIISGYVQQGLVEDAIY 361
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
+ M + ++Y+ TLA+++SA + LKLGK V +++ S+ ++S ++D Y
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----------- 304
KCG++ A+ V+ K ++L+A Y+ G +A RLF +
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 305 ----------------------------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 336
N + WT + +G V++ E R+ + +
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES- 540
Query: 337 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKLASALVDMYSKCGNIAY 395
L P+ I L ACA A+L +G+ H YI+R + + ++LVDMY+KCG+I
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 396 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
AEK F S+ + L N MI+ YA +G +AI L++ + + LKPD IT +LSAC
Sbjct: 601 AEKVFGSKLYSE--LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Query: 456 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASI 515
H G + + F + ++ P + HY MVD+ + EKA+ + ++P + DA +
Sbjct: 659 NHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARM 718
Query: 516 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRG 575
+ + +C T LV +LL+ E +N YV ++N YA EG W+E+ ++R+ M+
Sbjct: 719 IQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 576 KEATKLPGCSWIYV--ENGIHVFTSGDTSHSKADAIYSTLVCL 616
K K PGCSWI + E G+HVF + D +H++ + I L L
Sbjct: 779 KGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 232/504 (46%), Gaps = 71/504 (14%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN + +++ Y K L A LF R++ S+ +++ C+ AL F
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG-ALMGFVE 163
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M + I D + + L+ +G+ +H Y+VK+ + F SSL DMY KC
Sbjct: 164 M--LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G +A VF ++ +NA V+WN L+ G
Sbjct: 222 GVLDDASKVFD------EIPDRNA---------------------------VAWNALMVG 248
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
YVQNG E A+ LF +M ++G+E + T+++ LSA + ++ GK HA+ + N +
Sbjct: 249 YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD 308
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ + +++FYCK G + YAE V FD + E
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMV-------------------------------FDRMFE 337
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
++ V W + SGYV+ E + + R E L D + + ++ A A L LGK+
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMR-LEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
Y +R D LAS ++DMY+KCG+I A+K F + ++D+IL+N ++A YA
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD--STVEKDLILWNTLLAAYAES 454
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G +A++LF M + P+ IT+ ++ + G V+ + F+ M+ ++P +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLIS 513
Query: 484 YACMVDMYGRGNQLEKAVEFMRKI 507
+ M++ + E+A+ F+RK+
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKM 537
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 36/295 (12%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
+ S+ ++ +NG ++ AL+L EM + + +L C + L GK +HA
Sbjct: 35 STSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHA 94
Query: 234 LVLKNDG--CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
+LKN N+++ + +V FY KC + AE
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEV-------------------------- 128
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
LF L RN W A+ + CE F E E + PD ++ NV A
Sbjct: 129 -----LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCKA 182
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
C G+ H Y++++ L +AS+L DMY KCG + A K F + DR+ +
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI--PDRNAV 240
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+N ++ GY +G +AI+LF +M K ++P +T LSA + G VE G++
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/626 (28%), Positives = 305/626 (48%), Gaps = 83/626 (13%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
+++ Y K + +A +F S RD+ YN+++S + +G A++ + M++ +
Sbjct: 101 SLVNMYAKCGLMRRAVLVF-GGSERDVFGYNALISGFV-VNGSPLDAMETYREMRA--NG 156
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I D+ T ++L S + + K++H K D + S L+ YSK S +A
Sbjct: 157 ILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
VF + P+ +D+V WN L+ GY Q
Sbjct: 216 KVFD--------------------------------ELPDRDDSVLWNALVNGYSQIFRF 243
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
E AL +F +M E+G+ ++HT+ SVLSA T + G+ +H L +K S+ VS+ +
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
+D Y K + A S++ + + F +S++ + G+ LF+ +
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM--------- 354
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
LCSG + PD + + VL C A+L G++ H Y++
Sbjct: 355 -LCSG----------------------IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIV 391
Query: 371 TKL----NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILYNVMIAGYAHHG 424
+ L + +E + ++L+DMY KCG++ + ++V DS R D +N+MI GY
Sbjct: 392 SGLLNRKSSNEFIHNSLMDMYVKCGDL----RDARMVFDSMRVKDSASWNIMINGYGVQS 447
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
A+ +F M + +KPD ITFV LL AC H G + G F M+ YN+LP HY
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY 507
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
AC++DM GR ++LE+A E PI + +W + L++C+++ N L A + L ++E
Sbjct: 508 ACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEP 567
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
++ YV ++NVY GK+ E+ +R MR + K PGCSWI ++NG+H F +G+ +H
Sbjct: 568 EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHP 627
Query: 605 KADAIYSTLVC----LYGKLYLTFTE 626
+ +I+ L ++G Y+T +
Sbjct: 628 EFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 152/359 (42%), Gaps = 73/359 (20%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRD-LVSYNSMLSAYAGADGCDTVALDLFARMQSAR 68
+ ++ +Y K ++ A+ +FD RD V +N++++ Y+ + AL +F++M+
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFED-ALLVFSKMR--E 255
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
+ +G+ T+T++L+ + G+ +H VKT + ++LIDMY K E
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A ++F D D +WN+++ + G
Sbjct: 316 ANSIFEAMDE---------------------------------RDLFTWNSVLCVHDYCG 342
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV----LKNDGCSNQ 244
+ L LF M+ GI + TL +VL C L L+ G+ +H + L N SN+
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
F+ + ++D Y KCG++R A V+ + +K + + +I GY + S E
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ-----------SCGEL 451
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+++ +C VK PD + V +L AC+ L+ G+
Sbjct: 452 ALDMFSCMCRAGVK---------------------PDEITFVGLLQACSHSGFLNEGRN 489
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 266 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 325
V G SP A +SL+ Y+ G M +A +F SER+ + AL SG+V +
Sbjct: 87 VRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDA 145
Query: 326 FKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
+ +RE R ++PD ++L G+ A++ LS K+ H + + D + S LV
Sbjct: 146 METYREMRAN-GILPDKYTFPSLLKGSDAME--LSDVKKVHGLAFKLGFDSDCYVGSGLV 202
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
YSK ++ A+K F + D D D +L+N ++ GY+ A+ +F +M + +
Sbjct: 203 TSYSKFMSVEDAQKVFDELPDRD-DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS 261
Query: 445 AITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
T ++LSA G ++ G +++K +I ++DMYG+ LE+A
Sbjct: 262 RHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG--SDIVVSNALIDMYGKSKWLEEA 316
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
+ L CA + G+Q H +++R L+ + ++LV+MY+KCG + A F
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF---G 120
Query: 405 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 464
S+RDV YN +I+G+ +G A++ ++EM + PD TF +LL L ++
Sbjct: 121 GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ ++ K ++ + Y + +V Y + +E A + ++P + D+ +W A +N
Sbjct: 181 KVHGLAFKLGFD--SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F N+++ Y+K +L AR +FDS +D S+N M++ Y G C +ALD+F+ M
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY-GVQSCGELALDMFSCM 459
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDL-SKFALSSLIDMYSKC 123
R + DEIT +L + + G+ + M N L + + +IDM +
Sbjct: 460 --CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMAL 162
EAY + + V +++++C G D+AL
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 290/611 (47%), Gaps = 70/611 (11%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
H + F N ++ + + LF ++ YNS+++ + + LDLF
Sbjct: 42 HHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN-NHLFHETLDLFL 100
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
++ + + + T +L + G +HS +VK + A++SL+ +YS
Sbjct: 101 SIR--KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG 158
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
G +A+ +F D + D V+W L +
Sbjct: 159 SGRLNDAHKLF---DEIPD------------------------------RSVVTWTALFS 185
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY +G A+ LF +M+E G++ + + + VLSAC + L G+ + + + +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
N FV + +V+ Y KC G M KA+ +FDS+
Sbjct: 246 NSFVRTTLVNLYAKC-------------------------------GKMEKARSVFDSMV 274
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E++ V W+ + GY + + +LF + E L PD IV L +CA L LG+
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSIVGFLSSCASLGALDLGE 333
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
+ I R + + +A+AL+DMY+KCG +A + F+ + ++D+++ N I+G A
Sbjct: 334 WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIVIMNAAISGLAK 391
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
+G + +F + K+ + PD TF+ LL C H GL++ G +FF ++ Y + +
Sbjct: 392 NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVE 451
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
HY CMVD++GR L+ A + +P++ +A +WGA L+ C++ +T L + +EL+ +
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIAL 511
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
E N YVQL+N+Y+ G+W+E +R M K K+PG SWI +E +H F + D S
Sbjct: 512 EPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKS 571
Query: 603 HSKADAIYSTL 613
H +D IY+ L
Sbjct: 572 HPLSDKIYAKL 582
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 260/470 (55%), Gaps = 9/470 (1%)
Query: 149 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV---QNGYMERALTLFIEMIEKGI 205
+ AC G + A +VF P N T NT+I + A+T++ ++
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPN-TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCA 112
Query: 206 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 265
+ + T VL + + G+ +H V+ S+ V +G++ Y CG + A
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 266 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS--ERNYVVWTALCSGYVKSQQCE 323
++ + +K ++L+AGY G M +A+ L + + RN V WT + SGY KS +
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
++F+ E + PD + ++ VL ACA +L LG++ +Y+ +N L +A+
Sbjct: 233 EAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
+DMY+K GNI A F+ V ++R+V+ + +IAG A HG +A+ +F M+K ++P
Sbjct: 292 IDMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
+ +TF+A+LSAC H G V+LG++ F SM+ Y + P I HY CM+D+ GR +L +A E
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
++ +P + +A+IWG+ L A ++++ L ++A EL+K+E +N Y+ LAN+Y+ G+W
Sbjct: 410 IKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 469
Query: 564 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+E +R M+G K+ G S I VEN ++ F SGD +H + + I+ L
Sbjct: 470 DESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 191/413 (46%), Gaps = 41/413 (9%)
Query: 19 AHNLTQARALFDSASHRDLVSYNSMLSAYAGAD--GCDTVALDLFARMQSARDTIGMDEI 76
A +L A ++F + +N+M+ A + D ++A+ ++ ++ + D
Sbjct: 60 AGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWAL--CAKPDTF 117
Query: 77 TLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC 136
T +L ++ ++ V +G+Q+H +V D S ++ LI MY CG +A +F
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF-NDTVSWNTLIAGYVQNGYMERALT 195
V D+ NA++A + G+MD A ++ P + + VSW +I+GY ++G A+
Sbjct: 178 L-VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
+F M+ + +E ++ TL +VLSAC L L+LG+ + + V +++ ++D Y
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
K GN+ A V+ + ++ +++IAG ++ G+ +A +F+ +
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM-------------- 342
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
VK+ + P+ + + +L AC+ + LGK+ +R+K +
Sbjct: 343 -VKA-----------------GVRPNDVTFIAILSACSHVGWVDLGKRLFNS-MRSKYGI 383
Query: 376 DEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+ ++D+ + G + A++ + + I +++ A HH E
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 45/280 (16%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSAS--HRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
WNA++ Y K + +AR+L + R+ VS+ ++S YA + G + A+++F RM
Sbjct: 185 WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKS-GRASEAIEVFQRM-- 241
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ + DE+TL +L+ A L + G+++ SY+ + + +++IDMY+K G+
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
+A +VF C + + V+W T+IAG
Sbjct: 302 TKALDVFE-----------------CVNE----------------RNVVTWTTIIAGLAT 328
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
+G+ AL +F M++ G+ N T ++LSAC+ + + LGK + + G
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 247 SSG-IVDFYCKCGNMRYAESVYAGIGIKS-PFATSSLIAG 284
G ++D + G +R A+ V IKS PF ++ I G
Sbjct: 389 HYGCMIDLLGRAGKLREADEV-----IKSMPFKANAAIWG 423
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 184/685 (26%), Positives = 316/685 (46%), Gaps = 85/685 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F ++ Y K + AR +FDS R+L ++++M+ AY+ + VA LF M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA-KLFRLM 172
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+D + D+ +L A V GK +HS ++K +S++ +Y+KCG
Sbjct: 173 M--KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKM-------------------------- 158
A F D+++ N+++ A C++GK
Sbjct: 231 ELDFATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 159 ---------DMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
D A+++ K F D +W +I+G + NG +AL +F +M G+
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 207 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 266
N T+ S +SAC+ LK + G VH++ +K + V + +VD Y KCG + A V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF---------------------------- 298
+ + K + +S+I GY G KA LF
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 299 ------------DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
D +RN W + +GY+++ + + +LFR+ + + +P+++ I+
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR-FMPNSVTIL 528
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
++L ACA + ++ H +LR L+ + +AL D Y+K G+I Y+ F +
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF--LGME 586
Query: 407 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+D+I +N +I GY HG A+ LF +M + P+ T +++ A G V+ G+K
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN 526
F S+ DY+++P + H + MV +YGR N+LE+A++F++++ IQ + IW +FL C+I+
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706
Query: 527 NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
+ + A E L +E +N + ++ +YA K K R K G SW
Sbjct: 707 GDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSW 766
Query: 587 IYVENGIHVFTSGDTSHSKADAIYS 611
I V N IH FT+GD S D +Y
Sbjct: 767 IEVRNLIHTFTTGDQSKLCTDVLYP 791
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 78/377 (20%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTV 56
M R+ +WN++++AY + +A L LV++N ++ Y CD
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD-A 300
Query: 57 ALDLFARMQSARDTI---------------GM------------------DEITLTTMLN 83
A+DL +M++ T GM + +T+ + ++
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 84 LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 143
+ L+V+ G ++HS VK +SL+DMYSKCG +A VF D+
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVY 419
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFN------------------------------- 172
+ N+M+ C+ G A +F + + N
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 173 --------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC 224
+T +WN +IAGY+QNG + AL LF +M N T+ S+L AC L
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 225 LKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG 284
K+ + +H VL+ + + V + + D Y K G++ Y+ +++ G+ K +SLI G
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 599
Query: 285 YSSKGNMTKAKRLFDSL 301
Y G+ A LF+ +
Sbjct: 600 YVLHGSYGPALALFNQM 616
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA---LVLKNDGCS 242
+NG + A + ++G + + T +L +C + LG+ +HA L + D
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPD--- 114
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
FV + ++ Y KCG + A+++FDS+
Sbjct: 115 -VFVETKLLSMYAKCGCI-------------------------------ADARKVFDSMR 142
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
ERN W+A+ Y + + V KLFR + ++PD + +L CA + GK
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFR-LMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
H+ +++ ++ +++++++ +Y+KCG + +A K F+ + +RDVI +N ++ Y
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM--RERDVIAWNSVLLAYCQ 259
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
+G +A++L +EM K + P +T+ L+ G + M E + + +++
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVF 318
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKI 507
+ M+ +A++ RK+
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKM 343
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 278/566 (49%), Gaps = 63/566 (11%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
NL+ AR++F+S + +NSM+ Y+ + D AL + M R D T
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDK-ALIFYQEM--LRKGYSPDYFTFPY 112
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
+L + LR + +G +H ++VKT +++ + + L+ MY
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMY-------------------- 152
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
CC G+++ L VF P++N V+W +LI+G+V N A+ F EM
Sbjct: 153 ----------MCC--GEVNYGLRVFEDIPQWN-VVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
G++ N+ + +L AC K + GK H L+ G F S
Sbjct: 200 QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF-LQGLGFDPYFQSK------------ 246
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+G ATS LI Y+ G++ A+ LFD + ER V W ++ +GY ++
Sbjct: 247 ---------VGFNVILATS-LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
E +F + + PD + ++V+ A IQ LG+ HAY+ +T D +
Sbjct: 297 DAEEALCMFLDMLDL-GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KI 439
ALV+MY+K G+ A+K+F+ + +D I + V+I G A HG N+A+ +FQ M K
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDL--EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
+ PD IT++ +L AC H GLVE G+++F M++ + + P + HY CMVD+ R + E+
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
A ++ +P++ + +IWGA LN C I+ N L + + + E YV L+N+YA
Sbjct: 474 AERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAK 533
Query: 560 EGKWNEMGRIRKEMRGKEATKLPGCS 585
G+W ++ IR+ M+ K K+ G S
Sbjct: 534 AGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 151/366 (41%), Gaps = 49/366 (13%)
Query: 290 NMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL 349
N++ A+ +F+S+ + +W ++ GY S + ++E + PD VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVL 114
Query: 350 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 409
AC+ + G H ++++T ++ +++ L+ MY CG + Y + F+ + +
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI--PQWN 172
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR-----------HR 458
V+ + +I+G+ ++ + AI+ F+EM +K + V LL AC H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGA 518
L LG + K +NV+ ++DMY + L A +P + S W +
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILA----TSLIDMYAKCGDLRTARYLFDGMPERTLVS-WNS 287
Query: 519 FLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEA 578
+ N + AEE L ++ + ++ A K + IR M
Sbjct: 288 IITGYSQNGD------AEEAL--------CMFLDMLDLGIAPDKVTFLSVIRASM----- 328
Query: 579 TKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL------YLTFTELKQLDE 632
+ GCS + IH + S T K AI LV +Y K F +L++ D
Sbjct: 329 --IQGCSQL--GQSIHAYVS-KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 633 IQGNIV 638
I +V
Sbjct: 384 IAWTVV 389
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 136/327 (41%), Gaps = 43/327 (13%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
++I Y K +L AR LFD R LVS+NS+++ Y+ +G AL +F M
Sbjct: 256 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS-QNGDAEEALCMFLDMLDL--G 312
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I D++T +++ S G+ +H+Y+ KT + +L++MY+K G A
Sbjct: 313 IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAK 372
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
F DL K DT++W +I G +G+
Sbjct: 373 KAFE------DLEKK---------------------------DTIAWTVVIIGLASHGHG 399
Query: 191 ERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL++F M EKG + T VL AC+ + ++ G+ A + G G
Sbjct: 400 NEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYG 459
Query: 250 -IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+VD + G AE + + +K +L+ G N+ R+ ++E +
Sbjct: 460 CMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEEL 519
Query: 308 ---VWTALCSGYVKSQQCEAVFKLFRE 331
++ L + Y K+ + V KL RE
Sbjct: 520 GSGIYVLLSNIYAKAGRWADV-KLIRE 545
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCG---NIAYAEKSFQLVTDSDRDVILYNVMIAG 419
Q H ++++ + + S L+D + C N++YA F+ + V ++N MI G
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPS--VYIWNSMIRG 81
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVL 478
Y++ +KA+ +QEML+ PD TF +L AC ++ G +K + V
Sbjct: 82 YSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV- 140
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNN 528
+Y C++ MY ++ + IP Q + WG+ ++ +NNN
Sbjct: 141 -NMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISGF-VNNN 187
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 179/601 (29%), Positives = 306/601 (50%), Gaps = 34/601 (5%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV--ALDLF 61
RN +WN +I Y+K + QAR LFD RD+V++N+M+S Y G + A LF
Sbjct: 69 RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLF 128
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M S D + TM++ AK R + G+ + + + + + + S++I +
Sbjct: 129 DEMPSR------DSFSWNTMISGYAKNRRI--GEAL--LLFEKMPERNAVSWSAMITGFC 178
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS----- 176
+ G A +F V D A+VA ++ ++ A W ++ VS
Sbjct: 179 QNGEVDSAVVLFRKMP-VKDSSPLCALVAGLIKNERLSEAA---WVLGQYGSLVSGREDL 234
Query: 177 ---WNTLIAGYVQNGYMERALTLFIEMIE-----KGIEYNQHTLASVLSACTGLKC-LKL 227
+NTLI GY Q G +E A LF ++ + G E+ + +V+S + +K LK+
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 228 GKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
G V A +L + +S + ++D Y M A ++++ + + + + +++GY+
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
S GN+ A+ F+ E++ V W ++ + Y K++ + LF E PD +
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLT 413
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
++L A L LG Q H +++T + D + +AL+ MYS+CG I + + F +
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK-L 471
Query: 407 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
R+VI +N MI GYA HG ++A+ LF M + P ITFV++L+AC H GLV+ +
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN 526
F+SM Y + P++ HY+ +V++ Q E+A+ + +P + D ++WGA L+AC+I
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY 591
Query: 527 NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
NN L A E + ++E ++ + YV L N+YA G W+E ++R M K K G SW
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
Query: 587 I 587
+
Sbjct: 652 V 652
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 121/547 (22%), Positives = 218/547 (39%), Gaps = 109/547 (19%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R++FSWN +I Y K + +A LF+ R+ VS+++M++ + D+ A+ L
Sbjct: 131 MPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS-AVVL 189
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F +M +D+ + L L + +L + + +V DL +A ++LI Y
Sbjct: 190 FRKM-PVKDSSPL--CALVAGLIKNERLSEAAWVLGQYGSLVSGREDLV-YAYNTLIVGY 245
Query: 121 SKCGSFREAYNVFSGCDGVVDL-----------------VSKNAMVAACCRDGKMDMALN 163
+ G A +F D + DL VS N+M+ A + G + ++
Sbjct: 246 GQRGQVEAARCLF---DQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV-VSAR 301
Query: 164 VFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK 223
+ + + DT+SWNT+I GYV ME A LF EM + + H+ ++S +
Sbjct: 302 LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVG 357
Query: 224 CLKLGKCVHALVLKNDGCS-NQFVSS--------GIVDFYCKCG---------------- 258
++L + + S N +++ VD + +
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
Query: 259 ------NMRYAESVYAGIGIKSPFAT----SSLIAGYSSKGNMTKAKRLFDSLS-ERNYV 307
N+R ++ I +K+ ++LI YS G + +++R+FD + +R +
Sbjct: 418 ASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
W A+ GY LF ++ + P + V+VL ACA + K
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSN-GIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 368 ILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
++ K+ + S+LV++ S G E++ ++T
Sbjct: 536 MMSVYKIEPQMEHYSSLVNVTSGQGQF---EEAMYIIT---------------------- 570
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACR---HRGLVELGEKFFMSMKEDYNVLPEIYH 483
+ +PD + ALL ACR + GL + + MS E + P +
Sbjct: 571 -----------SMPFEPDKTVWGALLDACRIYNNVGLAHVAAE-AMSRLEPESSTPYVLL 618
Query: 484 YACMVDM 490
Y DM
Sbjct: 619 YNMYADM 625
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 184/438 (42%), Gaps = 32/438 (7%)
Query: 154 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 213
R G + A ++F K E +TV+WNT+I+GYV+ M +A LF M ++ + +T+
Sbjct: 52 RSGYIAEARDIFEK-LEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV-VTWNTMI 109
Query: 214 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
S +C G++ L+ + + + D S + SG Y K + A ++ + +
Sbjct: 110 SGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG----YAKNRRIGEALLLFEKMPER 165
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
+ + S++I G+ G + A LF + ++ AL +G +K+++ + ++
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 334 TTEALIPDTMIIVNVL------------GACAIQATLSLGKQTHAYILRTKLNMDEKLAS 381
+ + D + N L C L H R + + +
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
+++ Y K G++ A F + DRD I +N MI GY H A LF EM
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQM--KDRDTISWNTMIDGYVHVSRMEDAFALFSEM----P 339
Query: 442 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
DA ++ ++S G VEL +F E + V + ++ Y + ++AV
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-----SWNSIIAAYEKNKDYKEAV 394
Query: 502 EFMRKIPIQ---IDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYA 558
+ ++ I+ D + L+A N L Q + ++K + + L +Y+
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYS 454
Query: 559 AEGKWNEMGRIRKEMRGK 576
G+ E RI EM+ K
Sbjct: 455 RCGEIMESRRIFDEMKLK 472
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 287/617 (46%), Gaps = 74/617 (11%)
Query: 3 HRNAFS-WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
HRNA WN+++ Y K L A LFD RD++S N + + ++ L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETES-GFVLL 144
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
RM + G D TLT +L++ K +H+ + + D + LI Y
Sbjct: 145 KRMLGSG---GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYF 201
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
KCG VF G + ++ +I
Sbjct: 202 KCGCSVSGRGVFDGMS---------------------------------HRNVITLTAVI 228
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
+G ++N E L LF M + N T S L+AC+G + + G+ +HAL+ K
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
S + S ++D Y KCG++ A ++ F+S
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWTI-------------------------------FEST 317
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP-DTMIIVNVLGACAIQATLSL 360
+E + V T + G ++ E + F R +A + D ++ VLG I +L L
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFF--IRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
GKQ H+ +++ K + + + + L++MYSKCG++ ++ F+ + R+ + +N MIA +
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM--PKRNYVSWNSMIAAF 433
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
A HG A++L++EM + +KP +TF++LL AC H GL++ G + MKE + + P
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
HY C++DM GR L++A F+ +P++ D IW A L AC + +T + + A E+L
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+ D+ S ++ +AN+Y++ GKW E + K M+ TK G S I +E+ H F D
Sbjct: 554 QTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED 613
Query: 601 TSHSKADAIYSTLVCLY 617
H +A+AIY L L+
Sbjct: 614 KLHPQAEAIYDVLSGLF 630
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 162/383 (42%), Gaps = 63/383 (16%)
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
LG C+HA ++KN + E V A I + +SL++ Y+
Sbjct: 63 LGPCLHASIIKNP---------------------EFFEPVDADIHRNALVVWNSLLSLYA 101
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
G + A +LFD + R+ + + G++++++ E+ F L + + T+ IV
Sbjct: 102 KCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIV 161
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
L C + K HA + + + + + + L+ Y KCG F + S
Sbjct: 162 --LSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM--S 217
Query: 407 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
R+VI +I+G + ++LF M + + P+++T+++ L+AC + G++
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQL----------------------------- 497
++ Y + E+ + ++DMY + +
Sbjct: 278 IH-ALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG 336
Query: 498 --EKAVEF---MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
E+A++F M + ++IDA++ A L I+N+ L KQ ++K + +G+ +V
Sbjct: 337 SEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF-SGNTFVN 395
Query: 553 --LANVYAAEGKWNEMGRIRKEM 573
L N+Y+ G + + + M
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRM 418
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 244/453 (53%), Gaps = 7/453 (1%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK--LGKCV 231
TVSW + I +NG + A F +M G+E N T ++LS C LG +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 232 HALVLKNDGCSNQ-FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
H K N V + I+ Y K G + A V+ + K+ +++I GY G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
+ A ++FD + ER+ + WTA+ +G+VK E FRE + + + PD + I+ L
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALN 214
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
AC LS G H Y+L + +++++L+D+Y +CG + +A + F + R V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM--EKRTV 272
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
+ +N +I G+A +G ++++ F++M + KPDA+TF L+AC H GLVE G ++F
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 471 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN-NNT 529
MK DY + P I HY C+VD+Y R +LE A++ ++ +P++ + + G+ L AC + NN
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 530 TLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 589
L ++ + L + + S YV L+N+YAA+GKW ++R++M+G K PG S I +
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 590 ENGIHVFTSGDTSHSKADAIYSTLVCLYGKLYL 622
++ +HVF +GD +H + I L + L L
Sbjct: 453 DDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 77/418 (18%)
Query: 94 GKQMHSYMVKTANDLSKFAL-SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 152
G +H Y K D + + +++I MYSK G F++A VF + + V+ N M+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK-NSVTWNTMIDGY 150
Query: 153 CRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 212
R G++D A +F K PE D +SW +I G+V+ GY E AL F EM G++ + +
Sbjct: 151 MRSGQVDNAAKMFDKMPE-RDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 213 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 272
+ L+ACT L L G VH VL D +N VS+ ++D YC+CG + +A V+ +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
++ + +S+I G+++ GN ++ F + E+ +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK------------------------- 304
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKC 390
PD + L AC+ + G + + I++ + ++ LVD+YS+
Sbjct: 305 -------PDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G + A++L Q M +KP+ + +
Sbjct: 357 GRL---------------------------------EDALKLVQSM---PMKPNEVVIGS 380
Query: 451 LLSACRHRG-LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
LL+AC + G + L E+ M D NV +Y + +MY + E A + RK+
Sbjct: 381 LLAACSNHGNNIVLAER-LMKHLTDLNVKSH-SNYVILSNMYAADGKWEGASKMRRKM 436
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 64/350 (18%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M +N+ +WN +I Y+++ + A +FD RDL+S+ +M++ + G AL
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV-KKGYQEEALLW 193
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ + + D + + LN L + +G +H Y++ + +SLID+Y
Sbjct: 194 FREMQIS--GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLY 251
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+CG A VF N E VSWN++
Sbjct: 252 CRCGCVEFARQVFY---------------------------------NMEKRTVVSWNSV 278
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHA 233
I G+ NG +L F +M EKG + + T L+AC+ GL+ ++ KC +
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR 338
Query: 234 LV--LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK-SPFATSSLIAGYSSKG- 289
+ +++ GC +VD Y + G + A + + +K + SL+A S+ G
Sbjct: 339 ISPRIEHYGC--------LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Query: 290 NMTKAKRLFDSL------SERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
N+ A+RL L S NYV+ L + Y + E K+ R+ +
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSNYVI---LSNMYAADGKWEGASKMRRKMK 437
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/618 (27%), Positives = 296/618 (47%), Gaps = 51/618 (8%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F + +I Y + QA +FD + R+ SYN++L AY + + D F+ S
Sbjct: 58 FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE----MYFDAFSLFLS 113
Query: 67 -------ARDTIGMDEITLTTMLNLSAKLRVVCYG---KQMHSYMVKTANDLSKFALSSL 116
+ D D I+++ +L + G +Q+H ++++ D F + +
Sbjct: 114 WIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGM 173
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
I Y+KC + A VF D +S+ D VS
Sbjct: 174 ITYYTKCDNIESARKVF-------DEMSER--------------------------DVVS 200
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
WN++I+GY Q+G E ++ M+ + N T+ SV AC L G VH +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
++N + + + ++ FY KCG++ YA +++ + K ++I+GY + G + +A
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
LF + W A+ SG +++ E V FRE + P+T+ + ++L +
Sbjct: 321 ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR-PNTVTLSSLLPSLTYS 379
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+ L GK+ HA+ +R + + + ++++D Y+K G + A++ F DR +I +
Sbjct: 380 SNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD--NCKDRSLIAWTA 437
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
+I YA HG + A LF +M + KPD +T A+LSA H G ++ + F SM Y
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKY 497
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
++ P + HYACMV + R +L A+EF+ K+PI A +WGA LN + + + + A
Sbjct: 498 DIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFA 557
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
+ L ++E +N Y +AN+Y G+W E +R +M+ K+PG SWI E G+
Sbjct: 558 CDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRS 617
Query: 596 FTSGDTSHSKADAIYSTL 613
F + D+S ++ +Y +
Sbjct: 618 FIAKDSSCERSKEMYEII 635
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 226/491 (46%), Gaps = 34/491 (6%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F N +I Y K N+ AR +FD S RD+VS+NSM+S Y+ + + ++ M
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK-KMYKAM 224
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D + +T+ ++ + + +G ++H M++ + +++I Y+KCG
Sbjct: 225 LACSD-FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S A +F D V+ A+++ G + A+ +F E +WN +I+G
Sbjct: 284 SLDYARALFDEM-SEKDSVTYGAIISGYMAHGLVKEAMALF-SEMESIGLSTWNAMISGL 341
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+QN + E + F EMI G N TL+S+L + T LK GK +HA ++N +N
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL--- 301
+V++ I+D Y K G + A+ V+ +S A +++I Y+ G+ A LFD +
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 302 -SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
++ + V TA+ S + S + +F T + P AC +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY-----ACMVSVLSRA 516
Query: 361 GKQTHAYILRTKLNMDE--KLASALVDMYSKCGNIAYA----EKSFQLVTDSDRDVILYN 414
GK + A +K+ +D K+ AL++ S G++ A ++ F++ ++ + Y
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN---YT 573
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT-----------FVALLSAC-RHRGLVE 462
+M Y G +A + +M +I LK T F+A S+C R + + E
Sbjct: 574 IMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYE 633
Query: 463 LGEKFFMSMKE 473
+ E SM +
Sbjct: 634 IIEGLVESMSD 644
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 154/362 (42%), Gaps = 75/362 (20%)
Query: 89 RVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAM 148
R+ + Q+H+ +V + F S LI Y++ FR+A +VF ++ +NA
Sbjct: 36 RLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFD------EITVRNAF 89
Query: 149 VAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI------E 202
S+N L+ Y A +LF+ I
Sbjct: 90 ---------------------------SYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 203 KGIEYNQHTLASVLSACTGLKCLKLG---KCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
+ +++ VL A +G LG + VH V++ S+ FV +G++ +Y KC N
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A V+ + + + +S+I+GYS G+ K+++ ++ CS +
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM---------LACSDFK-- 231
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
P+ + +++V AC + L G + H ++ + MD L
Sbjct: 232 --------------------PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
+A++ Y+KCG++ YA F + S++D + Y +I+GY HG +A+ LF EM I
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEM--SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 440 SL 441
L
Sbjct: 330 GL 331
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLT-QARALFDSASHRDLVSYNSMLSAYAGADGCDTV--A 57
M +++ ++ AII Y+ AH L +A ALF L ++N+M+S + + V +
Sbjct: 295 MSEKDSVTYGAIISGYM-AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
R S +T+ + +L L S+ L+ GK++H++ ++ D + + +S+I
Sbjct: 354 FREMIRCGSRPNTVTLS--SLLPSLTYSSNLKG---GKEIHAFAIRNGADNNIYVTTSII 408
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NPEF 171
D Y+K G A VF C L++ A++ A G D A ++F + P
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKD-RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP-- 465
Query: 172 NDTVSWNTLIAGYVQNGYMERALTLFIEM-----IEKGIEYNQHTLASVLS 217
D V+ +++ + +G + A +F M IE G+E+ + SVLS
Sbjct: 466 -DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA-CMVSVLS 514
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 275/591 (46%), Gaps = 73/591 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I ++ + + LF + S+N M+ AL L+ RM+ +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS-- 126
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D+ T + AKL + G+ +HS + K + SLI MY+KCG A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F D + + DTVSWN++I+GY + GY
Sbjct: 187 RKLF---DEITE------------------------------RDTVSWNSMISGYSEAGY 213
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ A+ LF +M E+G E ++ TL S+L AC+ L L+ G+ + + + + F+ S
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++ Y KC G++ A+R+F+ + +++ V W
Sbjct: 274 LISMYGKC-------------------------------GDLDSARRVFNQMIKKDRVAW 302
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
TA+ + Y ++ + FKLF E T + PD + VL AC L LGKQ +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
L + +A+ LVDMY KCG + A + F+ + + +N MI YAH G +A
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT--WNAMITAYAHQGHAKEA 419
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
+ LF M S+ P ITF+ +LSAC H GLV G ++F M + ++P+I HY ++D
Sbjct: 420 LLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIID 476
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV-EADNGS 548
+ R L++A EFM + P + D + A L AC + + ++A L+++ EA N
Sbjct: 477 LLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 536
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 599
YV +NV A W+E ++R MR + K PGCSWI +E + F +G
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
KC ++ + A + + S + LI G+ + LF E N+ + + G
Sbjct: 46 KCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRG 105
Query: 316 YVKS-QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 374
+ EA L+R + + L PD V ACA + +G+ H+ + + L
Sbjct: 106 LTNTWNDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE 164
Query: 375 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
D + +L+ MY+KCG + YA K F +T +RD + +N MI+GY+ G+ A+ LF+
Sbjct: 165 RDVHINHSLIMMYAKCGQVGYARKLFDEIT--ERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 435 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 494
+M + +PD T V++L AC H G + G + M + + + ++ MYG+
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKC 281
Query: 495 NQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
L+ A ++ I+ D W A + N ++
Sbjct: 282 GDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGKSS 316
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 267/494 (54%), Gaps = 16/494 (3%)
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFW---------KNPEFNDTVSWNTLIAGYVQNGY 189
+ D+ + ++A C D + N+ +NP + +N LI +
Sbjct: 41 ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNP---NLFVFNLLIRCFSTGAE 97
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+A + +M++ I + T ++ A + ++C+ +G+ H+ +++ ++ +V +
Sbjct: 98 PSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENS 157
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+V Y CG + A ++ +G + + +S++AGY G + A+ +FD + RN W
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTW 217
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ + +GY K+ E LF EF E ++ + ++V+V+ +CA L G++ + Y++
Sbjct: 218 SIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
++ + ++ L +ALVDM+ +CG+I A F+ + ++D + ++ +I G A HG +KA
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS--LSWSSIIKGLAVHGHAHKA 334
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
+ F +M+ + P +TF A+LSAC H GLVE G + + +MK+D+ + P + HY C+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
M GR +L +A F+ K+ ++ +A I GA L ACKI NT + ++ L+KV+ ++
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG-DTSHSKADA 608
YV L+N+YA G+W+++ +R M+ K K PG S I ++ I+ FT G D H +
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGK 514
Query: 609 IYSTLVCLYGKLYL 622
I + GK+ L
Sbjct: 515 IRRKWEEILGKIRL 528
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 206/441 (46%), Gaps = 24/441 (5%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLTT 80
L A +F + +L +N ++ ++ GA+ + A + +M +R I D IT
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAE--PSKAFGFYTQMLKSR--IWPDNITFPF 122
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV 140
++ S+++ V G+Q HS +V+ + +SL+ MY+ CG A +F G G
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF-GQMGFR 181
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
D+VS +MVA C+ G ++ A +F + P N +W+ +I GY +N E+A+ LF M
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRN-LFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+G+ N+ + SV+S+C L L+ G+ + V+K+ N + + +VD + +CG++
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGY 316
A V+ G+ + SS+I G + G+ KA F + + V +TA+ S
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTM---IIVNVLGACAIQATLSLGKQTHAYILRTKL 373
E +++ + + P IV++LG A + +IL+ +
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA------EAENFILKMHV 414
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG-YAHHGFENKAIQL 432
+ + AL+ N AE+ ++ + Y V+++ YA G +K I+
Sbjct: 415 KPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDK-IES 473
Query: 433 FQEMLKISL--KPDAITFVAL 451
++M+K L KP + + +
Sbjct: 474 LRDMMKEKLVKKPPGWSLIEI 494
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 132/275 (48%), Gaps = 37/275 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ SW +++ Y K + AR +FD HR+L +++ M++ YA + C A+DL
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYA-KNNCFEKAIDL 236
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M+ R+ + +E + ++++ A L + +G++ + Y+VK+ ++ ++L+DM+
Sbjct: 237 FEFMK--REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+CG +A +VF G PE D++SW+++
Sbjct: 295 WRCGDIEKAIHVFEGL--------------------------------PE-TDSLSWSSI 321
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G +G+ +A+ F +MI G T +VLSAC+ ++ G ++ + K+ G
Sbjct: 322 IKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHG 381
Query: 241 CSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKS 274
+ G IVD + G + AE+ + +K
Sbjct: 382 IEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP 416
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 277/563 (49%), Gaps = 73/563 (12%)
Query: 15 AYIKAHNLTQARALFDSAS--HRDLVSYNSMLSAYAGADGC-DTVALDLFARMQSARDTI 71
AYI+++ L A + F+ R+ S+N++LS Y+ + C + L L+ RM+ R
Sbjct: 48 AYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMR--RHCD 105
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
G+D L + L ++ G +H +K D + SL++MY++ G+ A
Sbjct: 106 GVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQK 165
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
VF ++V W L+ GY++
Sbjct: 166 VFD---------------------------------EIPVRNSVLWGVLMKGYLKYSKDP 192
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC-SNQFVSSGI 250
LF M + G+ + TL ++ AC + K+GKCVH + ++ + ++ + I
Sbjct: 193 EVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI 252
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
+D Y KC + A++LF++ +RN V+WT
Sbjct: 253 IDMYVKCRLL-------------------------------DNARKLFETSVDRNVVMWT 281
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
L SG+ K ++ F LFR+ E+++P+ + +L +C+ +L GK H Y++R
Sbjct: 282 TLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
+ MD ++ +DMY++CGNI A F ++ + R+VI ++ MI + +G +A+
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE--RNVISWSSMINAFGINGLFEEAL 398
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
F +M ++ P+++TFV+LLSAC H G V+ G K F SM DY V+PE HYACMVD+
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 550
GR ++ +A F+ +P++ AS WGA L+AC+I+ L + E+LL +E + S Y
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVY 518
Query: 551 VQLANVYAAEGKWNEMGRIRKEM 573
V L+N+YA G W + +R++M
Sbjct: 519 VLLSNIYADAGMWEMVNCVRRKM 541
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 190/410 (46%), Gaps = 43/410 (10%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEF-NDTVSWNTLIAGYVQNGY--MERALTLF 197
++V +++ A + ++D A + F + P + + SWNT+++GY ++ L L+
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
M + L + AC GL L+ G +H L +KN + +V+ +V+ Y +
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
G M A+ V FD + RN V+W L GY+
Sbjct: 158 GTMESAQKV-------------------------------FDEIPVRNSVLWGVLMKGYL 186
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY-ILRTKLNMD 376
K + VF+LF R T L D + ++ ++ AC +GK H I R+ ++
Sbjct: 187 KYSKDPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
+ L ++++DMY KC + A K F+ T DR+V+++ +I+G+A +A LF++M
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 437 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 496
L+ S+ P+ T A+L +C G + G+ M + + + ++ +DMY R
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGN 362
Query: 497 LEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
++ A +P + + W + +NA IN L ++A + K+++ N
Sbjct: 363 IQMARTVFDMMP-ERNVISWSSMINAFGING---LFEEALDCFHKMKSQN 408
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 36/210 (17%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
+II Y+K L AR LF+++ R++V + +++S +A + A DLF +M R++
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA-VEAFDLFRQM--LRES 307
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I ++ TL +L + L + +GK +H YM++ ++ +S IDMY++CG+ + A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
VF DM PE N +SW+++I + NG
Sbjct: 368 TVF-------------------------DMM-------PERN-VISWSSMINAFGINGLF 394
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACT 220
E AL F +M + + N T S+LSAC+
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 264/510 (51%), Gaps = 46/510 (9%)
Query: 119 MYSKCGSFR-----EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 173
++ C + R A V +G + +V + A+ G + A +F + P+ +
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
++ N ++ G Q+ E+ ++L+ EM ++G+ +++T VL AC+ L+ G H
Sbjct: 78 SIC-NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
V+++ N++V + ++ F+ CG++ A ++ A SS+ +GY+ +G + +
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 294 AKRLFDSL-------------------------------SERNYVVWTALCSGYVKSQQC 322
A RLFD + +E++ V W A+ SGYV
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-----KLNMDE 377
+ +F+E R PD + I+++L ACA+ L GK+ H YIL T + +
Sbjct: 257 KEALGIFKEMRDA-GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ +AL+DMY+KCG+I A + F+ V DRD+ +N +I G A H E +I++F+EM
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGV--KDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQ 372
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
++ + P+ +TF+ ++ AC H G V+ G K+F M++ YN+ P I HY CMVDM GR QL
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
E+A F+ + I+ +A +W L ACKI N L K A E+LL + D YV L+N+Y
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIY 492
Query: 558 AAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
A+ G+W+ + ++RK K G S I
Sbjct: 493 ASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 42/225 (18%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP+++ +WN +I +K + AR LFD + +D+V++N+M+S Y G AL +
Sbjct: 204 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNC-GYPKEALGI 262
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-----SS 115
F M+ A + D +T+ ++L+ A L + GK++H Y+++TA+ S + ++
Sbjct: 263 FKEMRDAGEHP--DVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 116 LIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV 175
LIDMY+KCGS A VF G D
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKD---------------------------------RDLS 347
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
+WNTLI G + + E ++ +F EM + N+ T V+ AC+
Sbjct: 348 TWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 300/607 (49%), Gaps = 86/607 (14%)
Query: 25 ARALFDSASHRD--LVSYNSMLSAYAGADG-CDTVALDLFARMQSARDTIGMDEITLTTM 81
AR LFD RD +S NSM+ AY D+ AL R ++ D T TT+
Sbjct: 29 ARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETC---FAPDNFTFTTL 84
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+ V G Q+HS + +F + DMY G VVD
Sbjct: 85 TKSCSLSMCVYQGLQLHS-------QIWRFGFCA--DMYVSTG--------------VVD 121
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
+ +K GKM A N F + P ++ VSW LI+GY++ G ++ A LF +M
Sbjct: 122 MYAKF---------GKMGCARNAFDEMPHRSE-VSWTALISGYIRCGELDLASKLFDQMP 171
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
V +V+ N ++D + K G+M
Sbjct: 172 H----------------------------VKDVVIYN----------AMMDGFVKSGDMT 193
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 321
A ++ + K+ +++I GY + ++ A++LFD++ ERN V W + GY +++Q
Sbjct: 194 SARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ 253
Query: 322 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 381
+ +LF+E + T +L PD + I++VL A + LSLG+ H ++ R KL+ K+ +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCT 313
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
A++DMYSKCG I A++ F + ++ V +N MI GYA +G A+ LF M+ I
Sbjct: 314 AILDMYSKCGEIEKAKRIFDEM--PEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEE 370
Query: 442 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
KPD IT +A+++AC H GLVE G K+F M+E + +I HY CMVD+ GR L++A
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAE 429
Query: 502 EFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 561
+ + +P + + I +FL+AC + ++ ++ +++E N YV L N+YAA+
Sbjct: 430 DLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADK 489
Query: 562 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKLY 621
+W++ G ++ MR +A K GCS I + + F SGDT+H +I+ L G L
Sbjct: 490 RWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL----GDLL 545
Query: 622 LTFTELK 628
+ E K
Sbjct: 546 MHMNEEK 552
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M H+ +W +I Y ++ AR LFD+ R+LVS+N+M+ Y + + L
Sbjct: 202 MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC-QNKQPQEGIRL 260
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ A ++ D++T+ ++L + + G+ H ++ + D ++++DMY
Sbjct: 261 FQEMQ-ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCG +A +F + PE SWN +
Sbjct: 320 SKCGEIEKAKRIFD--------------------------------EMPE-KQVASWNAM 346
Query: 181 IAGYVQNGYMERALTLFIE-MIEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHALVLKN 238
I GY NG AL LF+ MIE+ + ++ T+ +V++AC ++ G K H V++
Sbjct: 347 IHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRKWFH--VMRE 402
Query: 239 DGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 282
G + + G +VD + G+++ AE + + PF + +I
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM----PFEPNGII 443
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 268/530 (50%), Gaps = 38/530 (7%)
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 154
KQ+H ++++ D S + L+ LI +K G + Y V++ V
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY-----ARRVIEPV----------- 109
Query: 155 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 214
+F + W +I GY G + A+ ++ M ++ I T ++
Sbjct: 110 ---------------QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSA 154
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
+L AC +K L LG+ HA + G +V + ++D Y KC ++ A V+ + +
Sbjct: 155 LLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+ + LIA Y+ GNM A LF+SL ++ V WTA+ +G+ ++ + + + F
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK--LASALVDMYSKCGN 392
+ + D + + + ACA + ++ + + + SAL+DMYSKCGN
Sbjct: 275 S-GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVAL 451
+ A F ++ ++++V Y+ MI G A HG +A+ LF M+ + +KP+ +TFV
Sbjct: 334 VEEAVNVF--MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 452 LSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQI 511
L AC H GLV+ G + F SM + + V P HY CMVD+ GR +L++A+E ++ + ++
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 512 DASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRK 571
+WGA L AC+I+NN + + A E L ++E D Y+ L+NVYA+ G W + R+RK
Sbjct: 452 HGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRK 511
Query: 572 EMRGKEATKLPGCSWIYVENG-IHVFTSGDTSHSKADAIYSTLVCLYGKL 620
++ K K P SW+ +NG +H F G+ +H ++ I L L +L
Sbjct: 512 LIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERL 561
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 179/443 (40%), Gaps = 73/443 (16%)
Query: 25 ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL 84
AR + + R+ + +++ YA +G A+ ++ M+ ++ I T + +L
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYA-IEGKFDEAIAMYGCMR--KEEITPVSFTFSALLKA 158
Query: 85 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVS 144
++ + G+Q H+ + + +++IDMY KC S A VF D++S
Sbjct: 159 CGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPE-RDVIS 217
Query: 145 KNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 204
++AA R G M+ A +F P D V+W ++ G+ QN + AL F M + G
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPT-KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 205 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN--DGCSNQFVSSGIVDFYCKCGNMRY 262
I ++ T+A +SAC L K + K+ + + S ++D Y KCGN+
Sbjct: 277 IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 322
A +V+ + K+ F SS+I G ++ G +A LF +Y+V
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF------HYMV-------------- 376
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 382
T + P+T+ V L AC+ + G+Q
Sbjct: 377 -----------TQTEIKPNTVTFVGALMACSHSGLVDQGRQV------------------ 407
Query: 383 LVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 442
MY G RD Y M+ G +A++L + M S++
Sbjct: 408 FDSMYQTFG------------VQPTRD--HYTCMVDLLGRTGRLQEALELIKTM---SVE 450
Query: 443 PDAITFVALLSACRHRGLVELGE 465
P + ALL ACR E+ E
Sbjct: 451 PHGGVWGALLGACRIHNNPEIAE 473
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ SW +I AY + N+ A LF+S +D+V++ +M++ +A + AL+
Sbjct: 210 MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFA-QNAKPQEALEY 268
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL--SSLID 118
F RM+ + I DE+T+ ++ A+L Y + K+ S + S+LID
Sbjct: 269 FDRME--KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALID 326
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
MYSKCG+ EA NVF M++N + +++
Sbjct: 327 MYSKCGNVEEAVNVF--------------------------MSMN-------NKNVFTYS 353
Query: 179 TLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCV 231
++I G +G + AL LF M+ + I+ N T L AC+ + G+ V
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 285/591 (48%), Gaps = 72/591 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ + NA++ Y+ + AR +FD +RD++S+N+M+S Y +G AL +F
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY-RNGYMNDALMMFDW 208
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL-SSLIDMYSK 122
M +++ +D T+ +ML + L+ + G+ +H +V+ K + ++L++MY K
Sbjct: 209 M--VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLK 265
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CG +MD A VF E D ++W +I
Sbjct: 266 CG--------------------------------RMDEARFVF-DRMERRDVITWTCMIN 292
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY ++G +E AL L M +G+ N T+AS++S C + GKC+H ++ S
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ + + ++ Y KC + V++G S + T
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSG---ASKYHTGP---------------------- 387
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
W+A+ +G V+++ LF+ R E + P+ + ++L A A A L
Sbjct: 388 ------WSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGY 420
H Y+ +T A+ LV +YSKCG + A K F + + +DV+L+ +I+GY
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
HG + A+Q+F EM++ + P+ ITF + L+AC H GLVE G F M E Y L
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
HY C+VD+ GR +L++A + IP + +++WGA L AC + N L + A +L
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 591
++E +N YV LAN+YAA G+W +M ++R M K PG S I + +
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 39/316 (12%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
++S ++ A C G + A +F + P+ + +S+N +I YV+ G A+++FI M+
Sbjct: 51 ILSTLSVTYALC--GHITYARKLFEEMPQ-SSLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 202 EKGIE--YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
+G++ + +T V A LK +KLG VH +L++ +++V + ++ Y G
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A V+ + + + +++I+GY G M A +FD
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD-------------------- 207
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
+ E++ D IV++L C L +G+ H + +L ++
Sbjct: 208 ------------WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 380 ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
+ALV+MY KCG + A F + RDVI + MI GY G A++L + M
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRM--ERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 440 SLKPDAITFVALLSAC 455
++P+A+T +L+S C
Sbjct: 314 GVRPNAVTIASLVSVC 329
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF-REFRTTEA 337
S+L Y+ G++T A++LF+ + + + + + + YV+ +F R
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+PD V A ++ LG H ILR+ D+ + +AL+ MY G + A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
F ++ +RDVI +N MI+GY +G+ N A+ +F M+ S+ D T V++L C H
Sbjct: 173 DVFDVM--KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 458 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWG 517
+E+G + E+ + +I +V+MY + ++++A F+ + D W
Sbjct: 231 LKDLEMGRNVH-KLVEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWT 288
Query: 518 AFLNA 522
+N
Sbjct: 289 CMING 293
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 248/463 (53%), Gaps = 44/463 (9%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV-----SWNTLIAGYVQNGYMERALTL 196
L+SK + + CR ++D+A +F + D+ W + GY +NG AL +
Sbjct: 169 LLSKLITLFSVCR--RLDLARKIF---DDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 223
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
+++M+ IE +++ L AC LK L++G+ +HA ++K +Q V + ++ Y +
Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
G A+++FD +SERN V W +L S
Sbjct: 284 -------------------------------SGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
K + +F LFR+ + E + + +L AC+ A L GK+ HA IL++K D
Sbjct: 313 SKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
L ++L+DMY KCG + Y+ + F ++ +D+ +N+M+ YA +G + I LF+ M
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLT--KDLASWNIMLNCYAINGNIEEVINLFEWM 429
Query: 437 LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQ 496
++ + PD ITFVALLS C GL E G F MK ++ V P + HYAC+VD+ GR +
Sbjct: 430 IESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 497 LEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 556
+++AV+ + +P + ASIWG+ LN+C+++ N ++ + A +EL +E N YV ++N+
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNI 549
Query: 557 YAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSG 599
YA W+ + +IR+ M+ + K GCSW+ V++ I +F +G
Sbjct: 550 YADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 38/216 (17%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSAR 68
+N ++ Y+++ AR +FD S R++V++NS++S + + +LF +MQ
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM-FNLFRKMQ--E 330
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
+ IG TLTT+L +++ + GK++H+ ++K+ L+SL+DMY KCG
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
+ VF D+ L D SWN ++ Y NG
Sbjct: 391 SRRVF-------------------------DVMLT--------KDLASWNIMLNCYAING 417
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSAC--TGL 222
+E + LF MIE G+ + T ++LS C TGL
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGL 453
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 200/511 (39%), Gaps = 117/511 (22%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVS---YNSMLSAYAGADGCDTVALDLFARMQSAR 68
+I + L AR +FD + L++ + +M Y+ +G AL ++ M +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYS-RNGSPRDALIVYVDMLCSF 231
Query: 69 DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFRE 128
G +++ L L+ + G+ +H+ +VK + + + L+ +Y + G F +
Sbjct: 232 IEPG--NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD 289
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A VF G + V+WN+LI+ +
Sbjct: 290 ARKVFDGMSE---------------------------------RNVVTWNSLISVLSKKV 316
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ LF +M E+ I ++ TL ++L AC+ + L GK +HA +LK+ + + +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++D Y KCG + Y ++R+FD + ++
Sbjct: 377 SLMDMYGKCGEVEY-------------------------------SRRVFDVMLTKDLAS 405
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W + + Y + E V LF E+ + PD + V +L C+ G
Sbjct: 406 WNIMLNCYAINGNIEEVINLF-EWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER- 463
Query: 369 LRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
++T+ + L + LVD+ + G I
Sbjct: 464 MKTEFRVSPALEHYACLVDILGRAGKI--------------------------------- 490
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYA 485
+A+++ + M KP A + +LL++CR G V +GE ++ KE + + P +Y
Sbjct: 491 KEAVKVIETM---PFKPSASIWGSLLNSCRLHGNVSVGE---IAAKELFVLEPHNPGNYV 544
Query: 486 CMVDMYGRG---NQLEKAVEFMRKIPIQIDA 513
+ ++Y + ++K E M++ ++ +A
Sbjct: 545 MVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 263 AESVYAGIGIKS-----------PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV---V 308
A+S++ GI I S P S LI +S + A+++FD +++ + + V
Sbjct: 144 AKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV 203
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W A+ GY ++ ++ + + + P I L AC L +G+ HA I
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCS-FIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++ K +D+ + + L+ +Y + G A K F + S+R+V+ +N +I+ + ++
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM--SERNVVTWNSLISVLSKKVRVHE 320
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKF---FMSMKEDYNVLPEIYHYA 485
LF++M + + T +L AC + G++ + KE P++
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK----PDVPLLN 376
Query: 486 CMVDMYGRGNQLEKAVEFMRK---IPIQIDASIWGAFLNACKINNN 528
++DMYG+ + VE+ R+ + + D + W LN IN N
Sbjct: 377 SLMDMYGKCGE----VEYSRRVFDVMLTKDLASWNIMLNCYAINGN 418
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 306/609 (50%), Gaps = 82/609 (13%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y K +L + +F+ + ++ VS+ +M+S+Y + + AL F+ M +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK-ALRSFSEM--IKS 297
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDMYSKCGSFRE 128
I + +TL ++L+ + ++ GK +H + V+ D + +LS +L+++Y++CG
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL-- 355
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
S C+ V+ +VS +VA WN+LI+ Y G
Sbjct: 356 -----SDCETVLRVVSDRNIVA--------------------------WNSLISLYAHRG 384
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ +AL LF +M+ + I+ + TLAS +SAC + LGK +H V++ D S++FV +
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQN 443
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD----SLSER 304
++D Y K G++ A +V+ I +S +S++ G+S GN +A LFD S E
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N V + A V+ AC+ +L GK
Sbjct: 504 NEVTFLA------------------------------------VIQACSSIGSLEKGKWV 527
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H ++ + L D +AL+DMY+KCG++ AE F+ ++ ++ ++ MI Y HG
Sbjct: 528 HHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRS--IVSWSSMINAYGMHG 584
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
AI F +M++ KP+ + F+ +LSAC H G VE G+ +F MK + V P H+
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHF 643
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
AC +D+ R L++A ++++P DAS+WG+ +N C+I+ ++K + +L +
Sbjct: 644 ACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVT 703
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHS 604
D+ Y L+N+YA EG+W E R+R M+ K+PG S I ++ + F +G+ +
Sbjct: 704 DDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRI 763
Query: 605 KADAIYSTL 613
+ D IY L
Sbjct: 764 QTDEIYRFL 772
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 244/528 (46%), Gaps = 75/528 (14%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ +I +Y + +R +F++ + D Y ++ D A+DL+ R
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDA-AIDLYHR 90
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRV-VCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
+ S +T + + ++L A R + G ++H ++K D +SL+ MY +
Sbjct: 91 LVS--ETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
G+ +A VF G D V+W+TL++
Sbjct: 149 TGNLSDAEKVFDGM---------------------------------PVRDLVAWSTLVS 175
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
++NG + +AL +F M++ G+E + T+ SV+ C L CL++ + VH + +
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
++ + + ++ Y KCG++ ++R+F+ ++
Sbjct: 236 DETLCNSLLTMYSKCGDL-------------------------------LSSERIFEKIA 264
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
++N V WTA+ S Y + + E + F E + P+ + + +VL +C + + GK
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 363 QTHAYILRTKLNMD-EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
H + +R +L+ + E L+ ALV++Y++CG ++ E ++V SDR+++ +N +I+ YA
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV--SDRNIVAWNSLISLYA 381
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
H G +A+ LF++M+ +KPDA T + +SAC + GLV LG++ + +V E
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT-DVSDEF 440
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNT 529
+ ++DMY + ++ A +I + W + L N N+
Sbjct: 441 VQNS-LIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQNGNS 486
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 253 FYCKCGNMRYAESVYAGIGI-----KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ C ++R ++A + + + P + LI Y+ G+ ++ +F++ +
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHA 366
++ L V +A L+ +E + +VL ACA + LS+G + H
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRL-VSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
I++ ++ D + ++L+ MY + GN++ AEK F + RD++ ++ +++ +G
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSCLENGEV 183
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
KA+++F+ M+ ++PDA+T ++++ C G + + + L E +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS- 242
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
++ MY + L + KI + +A W A +++
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISS 277
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/608 (28%), Positives = 283/608 (46%), Gaps = 69/608 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N + ++++ Y K + A F S + VS+N++++ + T A L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT-AFWLLGLM 193
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + + MD T +L L KQ+H+ ++K +++I Y+ CG
Sbjct: 194 E-MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S +A VF G G DL+S WN++IAG+
Sbjct: 253 SVSDAKRVFDGLGGSKDLIS--------------------------------WNSMIAGF 280
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++ E A LFI+M +E + +T +LSAC+G + GK +H +V+K
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK------- 333
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS--SKGNMTKAKRLFDSLS 302
+ E V + AT++LI+ Y G M A LF+SL
Sbjct: 334 ----------------KGLEQVTS--------ATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
++ + W ++ +G+ + E K F R++E + D +L +C+ ATL LG+
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA-LLRSCSDLATLQLGQ 428
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
Q HA ++ +E + S+L+ MYSKCG I A K FQ ++ S + +N MI GYA
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS-SKHSTVAWNAMILGYAQ 487
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
HG ++ LF +M ++K D +TF A+L+AC H GL++ G + M+ Y + P +
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKV 542
HYA VD+ GR + KA E + +P+ D + FL C+ + Q LL++
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 607
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
E ++ YV L+++Y+ KW E ++K M+ + K+PG SWI + N + F + D S
Sbjct: 608 EPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRS 667
Query: 603 HSKADAIY 610
+ IY
Sbjct: 668 NPLCQDIY 675
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 33/320 (10%)
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 195
C + D+ N ++ + + G + A +F + P+ D+VSWNT+I+GY G +E A
Sbjct: 29 CGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSCGKLEDAWC 87
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
LF M G + + ++ + +L +K LG+ VH LV+K N +V S +VD Y
Sbjct: 88 LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA 147
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
KC + A F +SE N V W AL +G
Sbjct: 148 KCERVE-------------------------------DAFEAFKEISEPNSVSWNALIAG 176
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
+V+ + + F L A+ D +L +L KQ HA +L+ L
Sbjct: 177 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 236
Query: 376 DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 435
+ + +A++ Y+ CG+++ A++ F + S +D+I +N MIAG++ H + A +LF +
Sbjct: 237 EITICNAMISSYADCGSVSDAKRVFDGLGGS-KDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 436 MLKISLKPDAITFVALLSAC 455
M + ++ D T+ LLSAC
Sbjct: 296 MQRHWVETDIYTYTGLLSAC 315
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 216/514 (42%), Gaps = 73/514 (14%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N I+ +YIK L A LFD RD VS+N+M+S Y + A LF M+ R
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED-AWCLFTCMK--RS 95
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+D + + +L A ++ G+Q+H ++K + + + SSL+DMY+KC +A
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+ F K ++VSWN LIAG+VQ
Sbjct: 156 FEAF---------------------------------KEISEPNSVSWNALIAGFVQVRD 182
Query: 190 MERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
++ A L M ++ + + T A +L+ L K VHA VLK + +
Sbjct: 183 IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICN 242
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y CG++ A+ V+ G+G ++ +
Sbjct: 243 AMISSYADCGSVSDAKRVFDGLG------------------------------GSKDLIS 272
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W ++ +G+ K + E+ F+LF + + + D +L AC+ + GK H +
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 369 LRTKLNMDEKLASALVDMYSK--CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
++ L +AL+ MY + G + A F+ + +D+I +N +I G+A G
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL--KSKDLISWNSIITGFAQKGLS 389
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
A++ F + +K D F ALL +C ++LG++ ++ + + +
Sbjct: 390 EDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH-ALATKSGFVSNEFVISS 448
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
++ MY + +E A + ++I + W A +
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
TH Y ++ D +++ ++D Y K G + YA F + RD + +N MI+GY
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSC 79
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIY 482
G A LF M + D +F LL +LGE+ + +K Y +Y
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC--NVY 137
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+ +VDMY + ++E A E ++I + ++ W A +
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALI 174
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 263/541 (48%), Gaps = 67/541 (12%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
D + +L A L + G+Q+H ++ K + F L++LI MY KCG +A VF
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF 111
Query: 134 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND-TVSWNTLIAGYVQNGYMER 192
+NP+ + +V +N LI+GY N +
Sbjct: 112 E--------------------------------ENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
A +F M E G+ + T+ ++ CT + L LG+ +H +K S V + +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 253 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
Y KCG SV AG +RLFD + + + W A+
Sbjct: 200 MYMKCG------SVEAG-------------------------RRLFDEMPVKGLITWNAV 228
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
SGY ++ V +L+ + +++ + PD +V+VL +CA +G + +
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSS-GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
+ +++A + MY++CGN+A A F ++ + ++ + MI Y HG + L
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPV--KSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F +M+K ++PD FV +LSAC H GL + G + F +MK +Y + P HY+C+VD+ G
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
R +L++A+EF+ +P++ D ++WGA L ACKI+ N + + A ++++ E +N YV
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 612
++N+Y+ + RIR MR + K PG S++ + +H+F +GD SH + + ++
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRM 525
Query: 613 L 613
L
Sbjct: 526 L 526
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 181/472 (38%), Gaps = 107/472 (22%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVS--YNSMLSAYAGADGCDTVALDLFA 62
F A+I Y K + AR +F+ +S YN+++S Y A+ T A +F
Sbjct: 87 EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT-ANSKVTDAAYMFR 145
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
RM+ + +D +T+ ++ L + G+ +H VK D L+S I MY K
Sbjct: 146 RMKET--GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CGS +F +M + ++WN +I+
Sbjct: 204 CGSVEAGRRLFD------------------------EMPVK---------GLITWNAVIS 230
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
GY QNG L L+ +M G+ + TL SVLS+C L K+G V LV N
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP 290
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
N FVS+ + Y +CGN+ A +V+ + +KS + +++I Y G LFD +
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
+R + PD + V VL AC+ G
Sbjct: 351 KR--------------------------------GIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 363 QTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
+ + R KL + S LVD+ + G +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL---------------------------- 410
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
++A++ + M ++PD + ALL AC+ V++ E F + E
Sbjct: 411 -----DEAMEFIESM---PVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 38/350 (10%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
+ WN + +++L+ M+ G + + +L +C L G+ +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT--SSLIAGYSSKGNM 291
V K + FV + ++ YCKCG + A V+ S + ++LI+GY++ +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
T A +F + E V D++ ++ ++
Sbjct: 138 TDAAYMFRRMKETGVSV--------------------------------DSVTMLGLVPL 165
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
C + L LG+ H ++ L+ + + ++ + MY KCG++ + F + + +I
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP--VKGLI 223
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
+N +I+GY+ +G ++L+++M + PD T V++LS+C H G ++G + +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKL 282
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLN 521
E +P ++ + MY R L KA +P++ S W A +
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS-WTAMIG 331
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 174/613 (28%), Positives = 275/613 (44%), Gaps = 101/613 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RNA +W AII + A + F S + +S
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS--------------------- 207
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
D T L A LR V YGK +H++++ + +SL MY
Sbjct: 208 -------------DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++CG ++ +F +N D VSW +L
Sbjct: 255 TECGEMQDGLCLF---------------------------------ENMSERDVVSWTSL 281
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I Y + G +A+ FI+M + N+ T AS+ SAC L L G+ +H VL
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL---- 337
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
S G+ D S ++S++ YS+ GN+ A LF
Sbjct: 338 ------SLGLND---------------------SLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ R+ + W+ + GY ++ E FK F R + P + ++L A +
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS-GTKPTDFALASLLSVSGNMAVIEG 429
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
G+Q HA L L + + S+L++MYSKCG+I A F TD D D++ MI GY
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG-ETDRD-DIVSLTAMINGY 487
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
A HG +AI LF++ LK+ +PD++TF+++L+AC H G ++LG +F M+E YN+ P
Sbjct: 488 AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPA 547
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
HY CMVD+ R +L A + + ++ + D +W L ACK + ++A E +L
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+++ + V LAN+Y++ G E +RK M+ K K PG S I +++ + F SGD
Sbjct: 608 ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGD 667
Query: 601 TSHSKADAIYSTL 613
H +++ IY+ L
Sbjct: 668 RFHPQSEDIYNIL 680
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 68/460 (14%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F N+ + + I A NL AR +FD H D+VS+ S++ Y A+ D AL LF+ M+
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDE-ALILFSAMRV 99
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ D L+ +L + + YG+ +H+Y VKT+ S + SSL+DMY
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK----- 154
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
R GK+D + VF + P F + V+W +I G V
Sbjct: 155 ---------------------------RVGKIDKSCRVFSEMP-FRNAVTWTAIITGLVH 186
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
G + LT F EM + +T A L AC GL+ +K GK +H V+ + V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
++ + Y +CG M+ ++ +++SER+
Sbjct: 247 ANSLATMYTECGEMQDGLCLF-------------------------------ENMSERDV 275
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V WT+L Y + Q + F + R ++ + P+ ++ ACA + L G+Q H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQ-VPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+L LN ++++++ MYS CGN+ A FQ + RD+I ++ +I GY GF
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM--RCRDIISWSTIIGGYCQAGFG 392
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+ + F M + KP +LLS + ++E G +
Sbjct: 393 EEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM--IEKGIEYNQHTLA 213
G + A VF K P D VSW ++I YV + AL LF M ++ + + L+
Sbjct: 54 GNLRAARQVFDKMPH-GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 214 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
VL AC + G+ +HA +K S SVY G
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLS----------------------SVYVG---- 146
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
SSL+ Y G + K+ R+F + RN V WTA+ +G V + + + F E
Sbjct: 147 -----SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 334 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 393
+E L DT L ACA + GK H +++ +A++L MY++CG +
Sbjct: 202 RSEEL-SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
Query: 394 AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
F+ + S+RDV+ + +I Y G E KA++ F +M + P+ TF ++ S
Sbjct: 261 QDGLCLFENM--SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
Query: 454 ACRHRGLVELGEKF 467
AC + GE+
Sbjct: 319 ACASLSRLVWGEQL 332
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 269/534 (50%), Gaps = 37/534 (6%)
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
L L A+ R + K +H+++VK ++L+++Y KCG+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGA---------------- 53
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
AL VF + P D ++W +++ Q + L++F +
Sbjct: 54 ----------------ASHALQVFDEMPH-RDHIAWASVLTALNQANLSGKTLSVFSSVG 96
Query: 202 EKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ + ++++ AC L + G+ VH + ++ +++ V S +VD Y KCG +
Sbjct: 97 SSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
A++V+ I +K+ + +++++GY+ G +A LF L +N WTAL SG+V+S
Sbjct: 157 NSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSG 216
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+ F +F E R I D +++ +++GACA A G+Q H ++ + ++
Sbjct: 217 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 276
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+AL+DMY+KC ++ A+ F + RDV+ + +I G A HG KA+ L+ +M+
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSRM--RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+KP+ +TFV L+ AC H G VE G + F SM +DY + P + HY C++D+ GR L++A
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 501 VEFMRKIPIQIDASIWGAFLNACKINNNTTL-VKQAEEELLKVEADNGSRYVQLANVYAA 559
+ +P D W A L+ACK + ++ A+ + + + S Y+ L+N+YA+
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 454
Query: 560 EGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
W ++ R+++ E K PG S + V VF +G+TSH + I+ L
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 130/586 (22%), Positives = 238/586 (40%), Gaps = 107/586 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y K + A +FD HRD +++ S+L+A A+ + S+
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS-- 99
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFR 127
+ D+ + ++ A L + +G+Q+H + + + AND + SSL+DMY+KCG
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAND--EVVKSSLVDMYAKCGLLN 157
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A VF V + +S AMV+ + G+ + AL +F P + SW LI+G+VQ+
Sbjct: 158 SAKAVFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRILP-VKNLYSWTALISGFVQS 215
Query: 188 GYMERALTLFIEMIEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
G A ++F EM + ++ + L+S++ AC L G+ VH LV+ S F+
Sbjct: 216 GKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFI 275
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
S+ ++D Y KC ++ A+ +++ + + + +SLI G + G KA L+D +
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM----- 330
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ--- 363
+ + P+ + V ++ AC+ + G++
Sbjct: 331 ---------------------------VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 364 --THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
T Y +R L + L+D+ + G + AE
Sbjct: 364 SMTKDYGIRPSLQH----YTCLLDLLGRSGLLDEAE------------------------ 395
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
L M PD T+ ALLSAC+ +G ++G + + + L +
Sbjct: 396 ---------NLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK-LKDP 442
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
Y + ++Y AS+WG A + + K ++
Sbjct: 443 STYILLSNIYA-------------------SASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 542 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
V + Y + E + + ++ +EMR + +P SWI
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGY-VPDTSWI 528
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 37/300 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+N SW A++ Y K+ +A LF ++L S+ +++S + + G A +F
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS-GKGLEAFSVFTE 227
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+ R I +D + L++++ A L G+Q+H ++ D F ++LIDMY+KC
Sbjct: 228 MRRERVDI-LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
A ++FS +M D VSW +LI G
Sbjct: 287 SDVIAAKDIFS----------------------RM-----------RHRDVVSWTSLIVG 313
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Q+G E+AL L+ +M+ G++ N+ T ++ AC+ + ++ G+ + + K+ G
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 244 QFVS-SGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL 301
+ ++D + G + AE++ + T ++L++ +G R+ D L
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 242/463 (52%), Gaps = 33/463 (7%)
Query: 169 PEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKL 227
PE D +NTL+ GY ++ ++ +F+EM+ KG + + + A V+ A + L+
Sbjct: 66 PE-PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 228 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
G +H LK+ S+ FV + ++ Y CG + +A V+ + + A +++I
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 288 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE---------------- 331
++ A+ +FD + RN+ W + +GY+K+ + E+ ++F E
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 332 ------------FRTTE--ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
FR + + P+ + + VL AC+ + GK H ++ + +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ +AL+DMYS+CGN+ A F+ + + R ++ + MIAG A HG +A++LF EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ PD I+F++LL AC H GL+E GE +F MK Y++ PEI HY CMVD+YGR +L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
+KA +F+ ++PI A +W L AC + N L +Q ++ L +++ +N V L+N Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 558 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
A GKW ++ IRK M + K S + V ++ FT+G+
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE 526
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 183/484 (37%), Gaps = 103/484 (21%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
L AR L D +N+++ Y+ +D ++ +F M + + D + +
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHN-SVAVFVEMMR-KGFVFPDSFSFAFV 112
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+ R + G QMH +K + F ++LI MY CG A VF +
Sbjct: 113 IKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ-PN 171
Query: 142 LVSKNAMVAACCRD-------------------------------GKMDMALNVFWKNPE 170
LV+ NA++ AC R G+++ A +F + P
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 171 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 230
D VSW+T+I G NG + F E+ G+ N+ +L VLSAC+ + GK
Sbjct: 232 -RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 231 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKG 289
+H V K V++ ++D Y +CGN+ A V+ G+ K + +S+IAG + G
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 290 NMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL 349
+A RLF+ + T + PD + +++L
Sbjct: 351 QGEEAVRLFNEM--------------------------------TAYGVTPDGISFISLL 378
Query: 350 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 409
AC+ + G+ D +S+ + + E +
Sbjct: 379 HACSHAGLIEEGE----------------------DYFSEMKRVYHIEPEIE-------- 408
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 469
Y M+ Y G KA +M + P AI + LL AC G +EL E+
Sbjct: 409 --HYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Query: 470 SMKE 473
+ E
Sbjct: 464 RLNE 467
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 37/302 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN SWN ++ YIKA L A+ +F HRD VS+++M+ A +G + F
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA-HNGSFNESFLYFRE 259
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
+Q R + +E++LT +L+ ++ +GK +H ++ K ++LIDMYS+C
Sbjct: 260 LQ--RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G+ + MA VF E VSW ++IAG
Sbjct: 318 GN--------------------------------VPMARLVFEGMQEKRCIVSWTSMIAG 345
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
+G E A+ LF EM G+ + + S+L AC+ ++ G+ + + +
Sbjct: 346 LAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEP 405
Query: 244 QFVSSG-IVDFYCKCGNMRYAESVYAGIGI-KSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
+ G +VD Y + G ++ A + I + +L+ SS GN+ A+++ L
Sbjct: 406 EIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 465
Query: 302 SE 303
+E
Sbjct: 466 NE 467
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 261/497 (52%), Gaps = 7/497 (1%)
Query: 122 KCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
+C S E Y + + G VS+ +A G +D A K +
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD-PPNYG 75
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN +I G+ + E++++++I+M+ G+ + T ++ + + L KLG +H V+
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K+ + F+ + ++ Y + A ++ + K+ +S++ Y+ G++ A+
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+FD +SER+ V W+++ GYVK + ++F + + + + +V+V+ ACA
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
L+ GK H YIL L + L ++L+DMY+KCG+I A F + + D +++N +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 476
I G A HGF +++QLF +M + + PD ITF+ LL+AC H GLV+ FF S+KE
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-G 374
Query: 477 VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAE 536
P+ HYACMVD+ R ++ A +F+ ++PI+ S+ GA LN C + N L +
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 537 EELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVF 596
++L++++ N RYV LANVYA ++ +R+ M K K+ G S + ++ H F
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRF 494
Query: 597 TSGDTSHSKADAIYSTL 613
+ D +H +D IY+ L
Sbjct: 495 IAHDKTHFHSDKIYAVL 511
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 33/220 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MPH+N +WN+I+ AY K+ ++ AR +FD S RD+V+++SM+ Y G AL++
Sbjct: 169 MPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYV-KRGEYNKALEI 227
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F +M + +E+T+ +++ A L + GK +H Y++ L+ +SLIDMY
Sbjct: 228 FDQMMRMGSSKA-NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMY 286
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCGS +A++VF + + + D + WN +
Sbjct: 287 AKCGSIGDAWSVF-------------------------------YRASVKETDALMWNAI 315
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
I G +G++ +L LF +M E I+ ++ T +L+AC+
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 258/478 (53%), Gaps = 16/478 (3%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNP-EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 204
NA+ G+M A +F + P D V W TL++ + + G + ++ LF+EM K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 205 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
+E + ++ + C L+ L + H + +K ++ V + ++D Y KCG + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
++ + KS + + ++ + + + +F + ERN V WT + +GY+ +
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 325 VFKLFRE--FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK---- 378
V +L E FR L + + + ++L ACA L +G+ H Y L+ ++ M E+
Sbjct: 227 VLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD 284
Query: 379 ---LASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQE 435
+ +ALVDMY+KCGNI + F+L+ R+V+ +N + +G A HG I +F +
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLM--RKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 436 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 495
M++ +KPD +TF A+LSAC H G+V+ G + F S++ Y + P++ HYACMVD+ GR
Sbjct: 343 MIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAG 400
Query: 496 QLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLAN 555
+E+A MR++P+ + + G+ L +C ++ + ++ + EL+++ N + ++N
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 556 VYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+Y AEG+ + +R +R + K+PG S IYV + +H F+SGD SH + IY L
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 196/454 (43%), Gaps = 51/454 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFD--SASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
NA+ Y + + A+ LFD S +D V + ++LS+++ G ++ LF M+
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRY-GLLVNSMKLFVEMRRK 105
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R + +D++++ + + AKL + + +Q H VK S ++L+DMY KCG
Sbjct: 106 R--VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
E +F + +VS ++ + ++ VF + PE N V+W ++AGY+
Sbjct: 164 EVKRIFEELEE-KSVVSWTVVLDTVVKWEGLERGREVFHEMPERN-AVAWTVMVAGYLGA 221
Query: 188 GYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND------- 239
G+ L L EM+ + G N TL S+LSAC L +G+ VH LK +
Sbjct: 222 GFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
+ V + +VD Y KCGN+ + +V F
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNV-------------------------------FR 310
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ +RN V W AL SG + V +F + + PD + VL AC+ +
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM--IREVKPDDLTFTAVLSACSHSGIVD 368
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
G + + L + +VD+ + G I AE + + +V+L ++
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL-GSLLGS 427
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
+ HG A ++ +E++++S P + L+S
Sbjct: 428 CSVHGKVEIAERIKRELIQMS--PGNTEYQILMS 459
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 45/316 (14%)
Query: 273 KSP--FATSSLIAGYSSKGNMTKAKRLFD--SLSERNYVVWTALCSGYVKSQQCEAVFKL 328
K+P + +++L Y+S G M A++LFD LSE++ V WT L S + + KL
Sbjct: 39 KAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKL 98
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
F E R I D ++ + G CA L +Q H ++ + K+ +AL+DMY
Sbjct: 99 FVEMRRKRVEIDDVSVVC-LFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYG 157
Query: 389 KCGNIAYAEKSFQ-----------LVTDS------------------DRDVILYNVMIAG 419
KCG ++ ++ F+ +V D+ +R+ + + VM+AG
Sbjct: 158 KCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAG 217
Query: 420 YAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGE-------KFFMSM 471
Y GF + ++L EM+ + + +T ++LSAC G + +G K M M
Sbjct: 218 YLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMM 277
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTL 531
E+ + ++ +VDMY + ++ ++ R + + + W A + ++ +
Sbjct: 278 GEEAS-YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR-NVVTWNALFSGLAMHGKGRM 335
Query: 532 VKQAEEELLK-VEADN 546
V ++++ V+ D+
Sbjct: 336 VIDMFPQMIREVKPDD 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNMDEK--LASALVDMYSKCGNIAYAEKSFQLVTD 405
+L CA ++ L GK+ HA + + L + L++AL Y+ G + A+K F +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC---RHRGLVE 462
S++D + + +++ ++ +G +++LF EM + ++ D ++ V L C G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 493
G + M VL + ++DMYG+
Sbjct: 132 QGHGVAVKM----GVLTSVKVCNALMDMYGK 158
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 255/512 (49%), Gaps = 40/512 (7%)
Query: 117 IDMYSKCGSFRE-----AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 171
I + SKC S RE AY + S + V + + M A ++F E
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE- 91
Query: 172 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 231
D V +N++ GY + +LF+E++E GI + +T S+L AC K L+ G+ +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 232 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
H L +K N +V +++ Y +C ++ A V
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV------------------------- 186
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
FD + E V + A+ +GY + + LFRE + + L P+ + +++VL +
Sbjct: 187 ------FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSS 239
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
CA+ +L LGK H Y + K+ +AL+DM++KCG++ A F+ + +D
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM--RYKDTQ 297
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
++ MI YA+HG K++ +F+ M +++PD ITF+ LL+AC H G VE G K+F M
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTL 531
+ ++P I HY MVD+ R LE A EF+ K+PI +W L AC +NN L
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 417
Query: 532 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 591
++ E + +++ +G YV L+N+YA KW + +RK M+ ++A K+PGCS I V N
Sbjct: 418 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Query: 592 GIHVFTSGDTSHSKADAIYSTLVCLYGKLYLT 623
+H F SGD S ++ L + +L L+
Sbjct: 478 VVHEFFSGDGVKSATTKLHRALDEMVKELKLS 509
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 179/407 (43%), Gaps = 74/407 (18%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR-MQSARDTIGMDEITLT 79
+++ AR LF++ S D+V +NSM Y+ T L++F+ ++ D I D T
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRF----TNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
++L A + + G+Q+H +K D + + +LI+MY++C A VF
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF------ 187
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
+ +V C V +N +I GY + AL+LF E
Sbjct: 188 ------DRIVEPC---------------------VVCYNAMITGYARRNRPNEALSLFRE 220
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M K ++ N+ TL SVLS+C L L LGK +H K+ C V++ ++D + KCG+
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS 319
+ A S++ + K A S++I Y++ G K+ +F+ + N
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-------------- 326
Query: 320 QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKL 379
+ PD + + +L AC+ + G++ + ++ +K + +
Sbjct: 327 ------------------VQPDEITFLGLLNACSHTGRVEEGRKYFSQMV-SKFGIVPSI 367
Query: 380 A--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
++VD+ S+ GN+ A + + S +L+ +++A + H
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP-MLWRILLAACSSHN 413
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 156/344 (45%), Gaps = 51/344 (14%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N + +I Y + ++ AR +FD +V YN+M++ YA + + AL LF M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE-ALSLFREM 221
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL--SSLIDMYSK 122
Q + +EITL ++L+ A L + GK +H Y K + K+ ++LIDM++K
Sbjct: 222 QGK--YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK--HSFCKYVKVNTALIDMFAK 277
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
CGS +A ++F KM + DT +W+ +I
Sbjct: 278 CGSLDDAVSIFE----------------------KM-----------RYKDTQAWSAMIV 304
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
Y +G E+++ +F M + ++ ++ T +L+AC+ ++ G+ + ++ G
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 243 NQFVSSG-IVDFYCKCGNMRYAESVYAGIGI-KSPFATSSLIAGYSSKGNMTKAKRLFDS 300
G +VD + GN+ A + I +P L+A SS N+ A+++ +
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 301 LSER------NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
+ E +YV+ + L Y ++++ E V L + + +A+
Sbjct: 425 IFELDDSHGGDYVILSNL---YARNKKWEYVDSLRKVMKDRKAV 465
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 243/497 (48%), Gaps = 41/497 (8%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
A VF + PE N + N +I YV NG+ + +F M + + +T VL AC+
Sbjct: 93 ARKVFDEIPERN-VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 221 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 280
+ +G+ +H K S FV +G+V Y KCG + A V + + + +S
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 281 LIAGY-------------------------------------SSKGNMTKAKRLFDSLSE 303
L+ GY ++ N+ K +F + +
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
++ V W + Y+K+ +L+ + PD + I +VL AC + LSLGK+
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEA-DGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H YI R KL + L +AL+DMY+KCG + A F+ + RDV+ + MI+ Y
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISAYGFS 388
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G A+ LF ++ L PD+I FV L+AC H GL+E G F M + Y + P + H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
ACMVD+ GR ++++A F++ + ++ + +WGA L AC+++++T + A ++L ++
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
+ YV L+N+YA G+W E+ IR M+ K K PG S + V IH F GD SH
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 604 SKADAIYSTLVCLYGKL 620
++D IY L L K+
Sbjct: 569 PQSDEIYRELDVLVKKM 585
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 210/531 (39%), Gaps = 123/531 (23%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ AY ++ AR +FD R+++ N M+ +Y +G + +F M +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN-NGFYGEGVKVFGTMCGC--NV 136
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D T +L + + G+++H K + F + L+ MY KCG EA
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN----------------PEFNDT- 174
V D+VS N++V ++ + D AL V + P ++T
Sbjct: 197 VLDEMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 175 -------------------VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
VSWN +I Y++N A+ L+ M G E + ++ SV
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
L AC L LGK +H + + N + + ++D Y KCG +
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE-------------- 361
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY-VKSQQCEAVFKLFREFRT 334
KA+ +F+++ R+ V WTA+ S Y + C+AV LF + +
Sbjct: 362 -----------------KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV-ALFSKLQD 403
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQ-----THAYILRTKLNMDEKLASALVDMYSK 389
+ L+PD++ V L AC+ L G+ T Y + +L E LA +VD+ +
Sbjct: 404 S-GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL---EHLA-CMVDLLGR 458
Query: 390 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
G + +A + Q+M S++P+ +
Sbjct: 459 AGKV---------------------------------KEAYRFIQDM---SMEPNERVWG 482
Query: 450 ALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY-HYACMVDMYGRGNQLEK 499
ALL ACR ++G ++ + + + PE +Y + ++Y + + E+
Sbjct: 483 ALLGACRVHSDTDIG---LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%), Gaps = 24/265 (9%)
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL----IAGYSSKGNMTKAKRLFDS 300
F+ ++D Y ++R +V++ I ++ SSL + Y+S ++ A+++FD
Sbjct: 43 FLLGQVLDTY---PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ ERN ++ + YV + K+F + PD VL AC+ T+ +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVI 158
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIA 418
G++ H + L+ + + LV MY KCG ++ A +LV D S RDV+ +N ++
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA----RLVLDEMSRRDVVSWNSLVV 214
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH---RGLVELGEKFFMSMKE-- 473
GYA + + A+++ +EM + + DA T +LL A + ++ + + FF K+
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 474 -DYNVLPEIYHYACM----VDMYGR 493
+NV+ +Y M V++Y R
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSR 299
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
+ H+ I+ L + L L+ Y+ ++A A K F + +R+VI+ NVMI Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI--PERNVIIINVMIRSYV 116
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
++GF + +++F M +++PD TF +L AC G + +G K S + + +
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTL 175
Query: 482 YHYACMVDMYGRGNQLEKA 500
+ +V MYG+ L +A
Sbjct: 176 FVGNGLVSMYGKCGFLSEA 194
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 48/263 (18%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F N ++ Y K L++AR + D S RD+VS+NS++ YA D AL++ M+S
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD-ALEVCREMES 234
Query: 67 ARDTIGMDEITLTTMLNLSAKLRV--VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ I D T+ ++L + V Y K M M K S + + +I +Y K
Sbjct: 235 VK--ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK----SLVSWNVMIGVYMKNA 288
Query: 125 SFREAYNVFS--GCDG------------------------------------VVDLVSKN 146
EA ++S DG + +L+ +N
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 147 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
A++ + G ++ A +VF +N + D VSW +I+ Y +G A+ LF ++ + G+
Sbjct: 349 ALIDMYAKCGCLEKARDVF-ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 207 YNQHTLASVLSACTGLKCLKLGK 229
+ + L+AC+ L+ G+
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGR 430
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFAR 63
N NA+I Y K L +AR +F++ RD+VS+ +M+SAY GCD VA LF++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA--LFSK 400
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSK 122
+Q + + D I T L + ++ G+ M + L+ ++D+ +
Sbjct: 401 LQDS--GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMAL----NVFWKNPEFNDTVSWN 178
G +EAY + A++ AC D+ L +F PE + +
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS---GYY 515
Query: 179 TLIAG-YVQNGYMERALTLFIEMIEKGIEYN 208
L++ Y + G E + M KG++ N
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 239/460 (51%), Gaps = 40/460 (8%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
A +F + P+ N +SW T+I+ Y + ++AL L + M+ + N +T +SVL +C
Sbjct: 115 AHQLFDQMPQRN-VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 221 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 280
G+ +++ +H ++K S+ FV S ++D + K G A SV
Sbjct: 174 GMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV-------------- 216
Query: 281 LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
FD + + +VW ++ G+ ++ + + +LF+ + I
Sbjct: 217 -----------------FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA-GFIA 258
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
+ + +VL AC A L LG Q H +I+ K + D L +ALVDMY KCG++ A + F
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 401 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
+ +RDVI ++ MI+G A +G+ +A++LF+ M KP+ IT V +L AC H GL
Sbjct: 317 NQM--KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 461 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+E G +F SMK+ Y + P HY CM+D+ G+ +L+ AV+ + ++ + DA W L
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 521 NACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 580
AC++ N L + A ++++ ++ ++ Y L+N+YA KW+ + IR MR + K
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 581 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
PGCSWI V IH F GD SH + + L L +L
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 204/483 (42%), Gaps = 115/483 (23%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F N +I Y+K + L A LFD R+++S+ +M+SAY+ AL+L M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK-IHQKALELLVLM-- 153
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
RD + + T +++L + V + +H ++K + F S+LID+++K G
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
+A +VF ++V+ +A+V WN++I G+ Q
Sbjct: 211 EDALSVFD------EMVTGDAIV---------------------------WNSIIGGFAQ 237
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
N + AL LF M G Q TL SVL ACTGL L+LG H ++K D + +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLIL 295
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
++ +VD YCKCG++ A R+F+ + ER+
Sbjct: 296 NNALVDMYCKCGSLE-------------------------------DALRVFNQMKERDV 324
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
+ W+ + SG ++ + KLF +++ P+ + IV VL AC +HA
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSS-GTKPNYITIVGVLFAC-----------SHA 372
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+L Y +S + + D Y MI G
Sbjct: 373 GLLEDGW---------------------YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACR-HRGLV--ELGEKFFMSMKED----YNVLP 479
+ A++L EM +PDA+T+ LL ACR R +V E K +++ + Y +L
Sbjct: 412 DDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 480 EIY 482
IY
Sbjct: 469 NIY 471
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F +A+I + K A ++FD D + +NS++ +A D VAL+LF RM
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD-VALELFKRM 251
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ R ++ TLT++L L ++ G Q H ++VK DL ++L+DMY KCG
Sbjct: 252 K--RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCG 307
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S +A VF N M + D ++W+T+I+G
Sbjct: 308 SLEDALRVF------------NQM---------------------KERDVITWSTMISGL 334
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
QNGY + AL LF M G + N T+ VL AC+ L+ G
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
F + LI Y + A +LFD + +RN + WT + S Y K + + +L
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLR 155
Query: 336 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
+ + P+ +VL +C +S + H I++ L D + SAL+D+++K G
Sbjct: 156 DNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 396 AEKSF-QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
A F ++VT D I++N +I G+A + + A++LF+ M + + T ++L A
Sbjct: 213 ALSVFDEMVTG---DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 455 CRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 513
C L+ELG + + + K D +++ +VDMY + LE A+ ++ + D
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDV 324
Query: 514 SIWGAFLNACKIN 526
W ++ N
Sbjct: 325 ITWSTMISGLAQN 337
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/605 (27%), Positives = 283/605 (46%), Gaps = 71/605 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y A +A +F +DL+S+NS+++++ DG AL L M S+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN-DGRSLDALGLLCSMISSGK 341
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
++ + +T T+ L G+ +H +V + ++ ++L+ MY K G E+
Sbjct: 342 SV--NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
V + P D V+WN LI GY ++
Sbjct: 400 RR--------------------------------VLLQMPR-RDVVAWNALIGGYAEDED 426
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSAC-TGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
++AL F M +G+ N T+ SVLSAC L+ GK +HA ++ S++ V +
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y KC G+++ ++ LF+ L RN +
Sbjct: 487 SLITMYAKC-------------------------------GDLSSSQDLFNGLDNRNIIT 515
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W A+ + E V KL + R+ + D L A A A L G+Q H
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++ D + +A DMYSKCG I K L +R + +N++I+ HG+ +
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVK--MLPPSVNRSLPSWNILISALGRHGYFEE 632
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
F EML++ +KP +TFV+LL+AC H GLV+ G ++ + D+ + P I H C++
Sbjct: 633 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 692
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
D+ GR +L +A F+ K+P++ + +W + L +CKI+ N ++A E L K+E ++ S
Sbjct: 693 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 752
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
YV +N++A G+W ++ +RK+M K K CSW+ +++ + F GD +H +
Sbjct: 753 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 812
Query: 609 IYSTL 613
IY+ L
Sbjct: 813 IYAKL 817
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 233/517 (45%), Gaps = 79/517 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I N+ A +FD S RD +S+NS+ +AYA +G + +F+ M+ D
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA-QNGHIEESFRIFSLMRRFHD 240
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ + T++T+L++ + +G+ +H +VK D ++L+ MY+ G EA
Sbjct: 241 EV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
N+ +K D +SWN+L+A +V +G
Sbjct: 299 ---------------------------------NLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL L MI G N T S L+AC + G+ +H LV+ + NQ + +
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+V Y K G M ++++R+ + R+ V W
Sbjct: 386 LVSMYGKIGEM-------------------------------SESRRVLLQMPRRDVVAW 414
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT-LSLGKQTHAYI 368
AL GY + + + F+ R E + + + +V+VL AC + L GK HAYI
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
+ DE + ++L+ MY+KCG+++ ++ F + +R++I +N M+A AHHG +
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAHHGHGEE 531
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACM 487
++L +M + D +F LSA ++E G++ +++K + I++ A
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA- 590
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASI--WGAFLNA 522
DMY + ++ + V+ + P ++ S+ W ++A
Sbjct: 591 -DMYSKCGEIGEVVKML---PPSVNRSLPSWNILISA 623
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 201/456 (44%), Gaps = 47/456 (10%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS-FREAYNV 132
+E++ TM++ ++ + G + M S F ++SL+ + GS FRE V
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 133 --FSGCDGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
F G++ D+ A++ G + + VF + P+ N VSW +L+ GY G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN-VVSWTSLMVGYSDKGE 123
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E + ++ M +G+ N+++++ V+S+C LK LG+ + V+K+
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS----------- 172
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
G++S A +SLI+ S GN+ A +FD +SER+ +
Sbjct: 173 ---------------------GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI--IVNVLGACAIQATLSLGKQTHA 366
W ++ + Y ++ E F++F R + T + +++VLG Q G+ H
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ---KWGRGIHG 268
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+++ + + + L+ MY+ G A F+ + +D+I +N ++A + + G
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMASFVNDGRS 326
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYAC 486
A+ L M+ + +TF + L+AC E G + +I A
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA- 385
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+V MYG+ ++ ++ + ++P + D W A +
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/605 (27%), Positives = 283/605 (46%), Gaps = 71/605 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y A +A +F +DL+S+NS+++++ DG AL L M S+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN-DGRSLDALGLLCSMISSGK 358
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
++ + +T T+ L G+ +H +V + ++ ++L+ MY K G E+
Sbjct: 359 SV--NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
V + P D V+WN LI GY ++
Sbjct: 417 RR--------------------------------VLLQMPR-RDVVAWNALIGGYAEDED 443
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSAC-TGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
++AL F M +G+ N T+ SVLSAC L+ GK +HA ++ S++ V +
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 503
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y KC G+++ ++ LF+ L RN +
Sbjct: 504 SLITMYAKC-------------------------------GDLSSSQDLFNGLDNRNIIT 532
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W A+ + E V KL + R+ + D L A A A L G+Q H
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++ D + +A DMYSKCG I K L +R + +N++I+ HG+ +
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVK--MLPPSVNRSLPSWNILISALGRHGYFEE 649
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
F EML++ +KP +TFV+LL+AC H GLV+ G ++ + D+ + P I H C++
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS 548
D+ GR +L +A F+ K+P++ + +W + L +CKI+ N ++A E L K+E ++ S
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769
Query: 549 RYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADA 608
YV +N++A G+W ++ +RK+M K K CSW+ +++ + F GD +H +
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 609 IYSTL 613
IY+ L
Sbjct: 830 IYAKL 834
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 233/517 (45%), Gaps = 79/517 (15%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I N+ A +FD S RD +S+NS+ +AYA +G + +F+ M+ D
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA-QNGHIEESFRIFSLMRRFHD 257
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ + T++T+L++ + +G+ +H +VK D ++L+ MY+ G EA
Sbjct: 258 EV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
N+ +K D +SWN+L+A +V +G
Sbjct: 316 ---------------------------------NLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL L MI G N T S L+AC + G+ +H LV+ + NQ + +
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+V Y K G M ++++R+ + R+ V W
Sbjct: 403 LVSMYGKIGEM-------------------------------SESRRVLLQMPRRDVVAW 431
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT-LSLGKQTHAYI 368
AL GY + + + F+ R E + + + +V+VL AC + L GK HAYI
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
+ DE + ++L+ MY+KCG+++ ++ F + +R++I +N M+A AHHG +
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAHHGHGEE 548
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACM 487
++L +M + D +F LSA ++E G++ +++K + I++ A
Sbjct: 549 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA- 607
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASI--WGAFLNA 522
DMY + ++ + V+ + P ++ S+ W ++A
Sbjct: 608 -DMYSKCGEIGEVVKML---PPSVNRSLPSWNILISA 640
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 208/473 (43%), Gaps = 51/473 (10%)
Query: 61 FARMQSARDTIGM----DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
F R++ AR + +E++ TM++ ++ + G + M S F ++SL
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 117 IDMYSKCGS-FREAYNV--FSGCDGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN 172
+ + GS FRE V F G++ D+ A++ G + + VF + P+ N
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
VSW +L+ GY G E + ++ M +G+ N+++++ V+S+C LK LG+ +
Sbjct: 125 -VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNM 291
V+K+ G++S A +SLI+ S GN+
Sbjct: 184 GQVVKS--------------------------------GLESKLAVENSLISMLGSMGNV 211
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI--IVNVL 349
A +FD +SER+ + W ++ + Y ++ E F++F R + T + +++VL
Sbjct: 212 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 271
Query: 350 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD 409
G Q G+ H +++ + + + L+ MY+ G A F+ + +D
Sbjct: 272 GHVDHQ---KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKD 326
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 469
+I +N ++A + + G A+ L M+ + +TF + L+AC E G
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 470 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+ +I A +V MYG+ ++ ++ + ++P + D W A +
Sbjct: 387 LVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 437
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 285 YSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 344
Y+ G + A+ LFD + RN V W + SG V+ + FR+ + P + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFV 60
Query: 345 IVNVLGACAIQATL-SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 403
I +++ AC ++ G Q H ++ ++ L D +++A++ +Y G ++ + K F+ +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 404 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
DR+V+ + ++ GY+ G + I +++ M + + + ++S+C
Sbjct: 121 P--DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 261/529 (49%), Gaps = 46/529 (8%)
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
+ +D+ +L+ +L ++L V G Q+H ++ KT F + LI +Y KCG +
Sbjct: 117 VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSR 176
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP-EFNDTVSWNTLIAGYVQNG- 188
+F D VS N+M+ + G + A +F P E + +SWN++I+GY Q
Sbjct: 177 QMFDRMPKR-DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 189 YMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
++ A LF +M EK I +N
Sbjct: 236 GVDIASKLFADMPEKDLISWNS-------------------------------------- 257
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
++D Y K G + A+ ++ + + +++I GY+ G + AK LFD + R+ V
Sbjct: 258 --MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
+ ++ +GYV+++ ++F + L+PD +V VL A A LS H Y
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
I+ + + KL AL+DMYSKCG+I +A F+ + + D +N MI G A HG
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGGLAIHGLGE 433
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
A + ++ ++SLKPD ITFV +L+AC H GLV+ G F M+ + + P + HY CM
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 493
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
VD+ R +E A + ++P++ + IW FL AC + + + L+ N
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVF 596
S YV L+N+YA+ G W ++ R+R M+ ++ K+PGCSWI ++ +H F
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 188/456 (41%), Gaps = 83/456 (18%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFD--SASHRDLVSYNSMLSAYA-GADGCDTVA 57
MP R++ S+N++I Y+K + AR LFD ++L+S+NSM+S YA +DG D +A
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVD-IA 240
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
LFA M +D I + +S+I
Sbjct: 241 SKLFADMPE-KDLI----------------------------------------SWNSMI 259
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
D Y K G +A +F D+V+ M+ + G + A +F + P D V++
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPR-RDVVTWATMIDGYAKLGFVHHAKTLFDQMPH-RDVVAY 317
Query: 178 NTLIAGYVQNGYMERALTLFIEM-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
N+++AGYVQN Y AL +F +M E + + TL VL A L L +H ++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
+ + ++D Y KCG++++A V+ GI KS
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS---------------------- 415
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
D W A+ G E+ F + + +L PD + V VL AC+
Sbjct: 416 -IDH--------WNAMIGGLAIHGLGESAFDMLLQIERL-SLKPDDITFVGVLNACSHSG 465
Query: 357 TLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
+ G ++R K ++ +L +VD+ S+ G+I A+ + + DVI
Sbjct: 466 LVKEGLLCFE-LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRT 524
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
+ A H FE + +L+ P + ++
Sbjct: 525 FLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS 560
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 24/380 (6%)
Query: 170 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGK 229
E D WN +I + +AL L M+E G+ ++ +L+ VL AC+ L +K G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 141
Query: 230 CVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKG 289
+H + K S+ F+ + ++ Y KCG + + ++ + + + +S+I GY G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 290 NMTKAKRLFD--SLSERNYVVWTALCSGYVK-SQQCEAVFKLFREFRTTEALIPDTMIIV 346
+ A+ LFD + +N + W ++ SGY + S + KLF + + + ++M
Sbjct: 202 LIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM--- 258
Query: 347 NVLGACAIQATLSLGKQTHAY-ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
I + G+ A + D + ++D Y+K G + +A+ F +
Sbjct: 259 -------IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP- 310
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELG 464
RDV+ YN M+AGY + + +A+++F +M K S L PD T V +L A G +
Sbjct: 311 -HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ-IDASIWGAFLNAC 523
+ + E L A ++DMY + ++ A+ I + ID W A +
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVA-LIDMYSKCGSIQHAMLVFEGIENKSIDH--WNAMIGGL 426
Query: 524 KINNNTTLVKQAEEELLKVE 543
I+ L + A + LL++E
Sbjct: 427 AIHG---LGESAFDMLLQIE 443
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 236/470 (50%), Gaps = 37/470 (7%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI--EK 203
+ +V R G A +F + PE D VSWN+LI+GY GY+ + + M+ E
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPE-RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV 128
Query: 204 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
G N+ T S++SAC + G+C+H LV+K V + +++Y K
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK------- 181
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 323
G++T + +LF+ LS +N V W + ++++ E
Sbjct: 182 ------------------------TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
F R PD + VL +C + L + H I+ + ++ + +AL
Sbjct: 218 KGLAYFNMSRRV-GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL 276
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
+D+YSK G + + F +T D + + M+A YA HGF AI+ F+ M+ + P
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDS--MAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
D +TF LL+AC H GLVE G+ +F +M + Y + P + HY+CMVD+ GR L+ A
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
++++P++ + +WGA L AC++ +T L +A E L ++E +G YV L+N+Y+A G W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 564 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+ RIR M+ K + GCS+I N IH F GD SH +++ I L
Sbjct: 455 KDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 184/466 (39%), Gaps = 105/466 (22%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
+R+ F + ++ Y++ + A LFD RDLVS+NS++S Y+G G ++ +
Sbjct: 63 YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR-GYLGKCFEVLS 121
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
RM + +E+T +M++ G+ +H ++K +++ I+ Y K
Sbjct: 122 RMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK 181
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
G ++ S C DL KN VSWNT+I
Sbjct: 182 TG------DLTSSCKLFEDLSIKN---------------------------LVSWNTMIV 208
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
++QNG E+ L F G E +Q T +VL +C + ++L + +H L++
Sbjct: 209 IHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSG 268
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
N+ +++ ++D Y K G + + +V+ I A ++++A Y++ G A + F
Sbjct: 269 NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF---- 324
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E + PD + ++L AC+ + GK
Sbjct: 325 ----------------------------ELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Query: 363 QTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
+ + + +D +L S +VD+ + G L+ D
Sbjct: 357 H-YFETMSKRYRIDPRLDHYSCMVDLLGRSG----------LLQD--------------- 390
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
A L +EM ++P + + ALL ACR +LG K
Sbjct: 391 --------AYGLIKEM---PMEPSSGVWGALLGACRVYKDTQLGTK 425
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 7/259 (2%)
Query: 266 VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 325
V + + F L+ Y G+ A++LFD + ER+ V W +L SGY
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 326 FKLFREFRTTE-ALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
F++ +E P+ + ++++ AC + G+ H +++ + + K+ +A +
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFI 176
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
+ Y K G++ + K F+ + S ++++ +N MI + +G K + F ++ +PD
Sbjct: 177 NWYGKTGDLTSSCKLFEDL--SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPD 234
Query: 445 AITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
TF+A+L +C G+V L + + M ++ I ++D+Y + +LE +
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI--TTALLDLYSKLGRLEDSSTV 292
Query: 504 MRKIPIQIDASIWGAFLNA 522
+I D+ W A L A
Sbjct: 293 FHEI-TSPDSMAWTAMLAA 310
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 279/582 (47%), Gaps = 77/582 (13%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F +++ Y K+ N ++A F D+ S+ S++++ A + + + D+F MQ+
Sbjct: 266 FVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE-SFDMFWEMQN 324
Query: 67 ARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
GM D + ++ ++N K+ +V GK H ++++ L +SL+ MY
Sbjct: 325 K----GMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY---- 376
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
C+ + +A +F + E + +WNT++ GY
Sbjct: 377 ----------------------------CKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+ + + LF ++ GIE + + SV+S+C+ + + LGK +H V+K
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS----- 463
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
+D N SLI Y G++T A R+F ++
Sbjct: 464 ------LDLTISVVN--------------------SLIDLYGKMGDLTVAWRMFCE-ADT 496
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N + W A+ + YV +Q E LF +E P ++ +V +L AC +L G+
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV-TDSDRDVILYNVMIAGYAHH 423
H YI T+ M+ L++AL+DMY+KCG++ EKS +L + +D + +NVMI+GY H
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHL---EKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G AI LF +M + +KP TF+ALLSAC H GLVE G+K F+ M + Y+V P + H
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKH 671
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
Y+C+VD+ R LE+A + +P D IWG L++C + + + E + +
Sbjct: 672 YSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASD 731
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 585
N Y+ LAN+Y+A GKW E R R+ MR K G S
Sbjct: 732 PQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 216/503 (42%), Gaps = 78/503 (15%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSA-YAGADGCDTVALDLFA 62
N F + +I +Y + +F + RD+ +NS++ A ++ D ++ F+
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCF-FFS 115
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLIDMYS 121
+ S + D T +++ A+L G +H ++K D + +S + YS
Sbjct: 116 MLLSGQSP---DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYS 172
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
KCG ++A VF D + D D V+W +I
Sbjct: 173 KCGFLQDACLVF---DEMPD------------------------------RDVVAWTAII 199
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEY---NQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
+G+VQNG E L +M G + N TL AC+ L LK G+C+H +KN
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
S++FV S + FY S GN ++A F
Sbjct: 260 GLASSKFVQSSMFSFY-------------------------------SKSGNPSEAYLSF 288
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
L + + WT++ + +S E F +F E + + + PD ++I ++ +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLV 347
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
GK H +++R ++D + ++L+ MY K ++ AEK F +++ + + +N M+
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE-EGNKEAWNTMLK 406
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNV 477
GY K I+LF+++ + ++ D+ + +++S+C H G V LG+ +K ++
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 478 LPEIYHYACMVDMYGRGNQLEKA 500
+ + ++D+YG+ L A
Sbjct: 467 TISVVN--SLIDLYGKMGDLTVA 487
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 251/465 (53%), Gaps = 7/465 (1%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
T +N LI Y + ++ L+ + G+ + HT + +A + + +H+
Sbjct: 47 TFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
++ S+ F + ++ Y K G + A V+ + + +++I GY +G+M
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
A LFDS+ +N WT + SG+ ++ K+F +++ P+ + +V+VL ACA
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
L +G++ Y + + +A ++MYSKCG I A++ F+ + + R++ +
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ-RNLCSW 285
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
N MI A HG ++A+ LF +ML+ KPDA+TFV LL AC H G+V G++ F SM+E
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVK 533
+ + P++ HY CM+D+ GR +L++A + ++ +P++ DA +WG L AC + N + +
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG- 592
A E L K+E N V ++N+YAA KW+ + R+RK M+ + TK G S+ +VE G
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY-FVEVGV 464
Query: 593 -IHVFTSGDTSHSKADAIYSTLVCLYGKLYLT---FTELKQLDEI 633
+H FT D SH ++ IY L ++ ++ L F L Q +++
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFDSLLQPEQL 509
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 171/448 (38%), Gaps = 76/448 (16%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSA-YAGADGCDTVALDLFARMQSARDTIGMDEITLT 79
NL AR LFD + YN ++ A Y +++ L R + T
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS----HHTFN 86
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
+ SA + +HS ++ + F ++LI Y+K G+ A VF
Sbjct: 87 FIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK- 145
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
D+ NAM+ R G M A+ +F P N T SW T+I+G+ QNG AL +F+
Sbjct: 146 RDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT-SWTTVISGFSQNGNYSEALKMFLC 204
Query: 200 M-IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
M +K ++ N T+ SVL AC L L++G+ + +N N +V + ++ Y KCG
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCG 264
Query: 259 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL-SERNYVVWTALCSGYV 317
+ AKRLF+ L ++RN W ++
Sbjct: 265 MIDV-------------------------------AKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
+ + LF + E PD + V +L AC + G++
Sbjct: 294 THGKHDEALTLFAQM-LREGEKPDAVTFVGLLLACVHGGMVVKGQELF------------ 340
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
KS + V + Y MI G +A L + M
Sbjct: 341 --------------------KSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM- 379
Query: 438 KISLKPDAITFVALLSACRHRGLVELGE 465
+KPDA+ + LL AC G VE+ E
Sbjct: 380 --PMKPDAVVWGTLLGACSFHGNVEIAE 405
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 5/205 (2%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ WNA+I Y + ++ A LFDS +++ S+ +++S ++ +G + AL +
Sbjct: 143 MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFS-QNGNYSEALKM 201
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M+ + ++ + IT+ ++L A L + G+++ Y + + + ++ I+MY
Sbjct: 202 FLCMEKDK-SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY 260
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSW 177
SKCG A +F +L S N+M+ + GK D AL +F + E D V++
Sbjct: 261 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 178 NTLIAGYVQNGYMERALTLFIEMIE 202
L+ V G + + LF M E
Sbjct: 321 VGLLLACVHGGMVVKGQELFKSMEE 345
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 277/532 (52%), Gaps = 42/532 (7%)
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCR 154
+++ Y +++ + A SSL D++S + ++A+ VF D+ +A++
Sbjct: 68 RKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF-VFGYQS---DIFVSSALIVMYST 123
Query: 155 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI------EKGIEYN 208
GK++ A VF + P+ N VSW ++I GY NG A++LF +++ + + +
Sbjct: 124 CGKLEDARKVFDEIPKRN-IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 209 QHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
L SV+SAC+ + L + +H+ V+K V + ++D Y K G
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG---------- 232
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
+G + A+++FD + +++ V + ++ S Y +S F++
Sbjct: 233 -------------------EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
FR + + + + + VL A + L +GK H ++R L D + ++++DMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 448
KCG + A K+F + +++V + MIAGY HG KA++LF M+ ++P+ ITF
Sbjct: 334 KCGRVETARKAFDRM--KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 449 VALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
V++L+AC H GL G ++F +MK + V P + HY CMVD+ GR L+KA + ++++
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 509 IQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGR 568
++ D+ IW + L AC+I+ N L + + L ++++ N Y+ L+++YA G+W ++ R
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 569 IRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
+R M+ + K PG S + + +HVF GD H + + IY L L KL
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL 563
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 197/467 (42%), Gaps = 106/467 (22%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY-AGADGCDTVAL--DLF 61
+ F +A+I+ Y L AR +FD R++VS+ SM+ Y + D V+L DL
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
D + +D + L ++++ +++ + +HS+++K D ++L+D Y+
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
K G +G + +A +F + + D VS+N+++
Sbjct: 230 KGG------------------------------EGGVAVARKIFDQIVD-KDRVSYNSIM 258
Query: 182 AGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
+ Y Q+G A +F +++ K + +N TL++VL A + L++GKC+H V++
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+ V + I+D YCKCG + A + + K+ + +++IAGY G+ KA LF +
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ + + P+ + V+VL AC+ A L +
Sbjct: 379 MID--------------------------------SGVRPNYITFVSVLAACS-HAGLHV 405
Query: 361 GKQTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
++ + ++ L +VD+ + G
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG--------------------------- 438
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
F KA L Q M +KPD+I + +LL+ACR VEL E
Sbjct: 439 ------FLQKAYDLIQRM---KMKPDSIIWSSLLAACRIHKNVELAE 476
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
D SWN++IA ++G AL F M + + + + + AC+ L + GK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 292
S+ FVSS ++ Y CG + A V+ I ++ + +S+I GY GN
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 293 KAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 352
A LF L L E +A+ D+M +V+V+ AC
Sbjct: 160 DAVSLFKDL--------------------------LVDENDDDDAMFLDSMGLVSVISAC 193
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN--IAYAEKSFQLVTDSDRDV 410
+ L + H+++++ + + + L+D Y+K G +A A K F + D DR
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR-- 251
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP-DAITFVALLSACRHRGLVELG----- 464
+ YN +++ YA G N+A ++F+ ++K + +AIT +L A H G + +G
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMY---GRGNQLEKAVEFMRKIPIQIDASIWGAFLN 521
+ M +++D V I +DMY GR KA + M+ ++ W A +
Sbjct: 312 QVIRMGLEDDVIVGTSI------IDMYCKCGRVETARKAFDRMKNKNVR----SWTAMIA 361
Query: 522 ACKINNNTTLVKQAEEELLKVEADNGSR--YVQLANVYAA 559
++ + EL D+G R Y+ +V AA
Sbjct: 362 GYGMHGHAA----KALELFPAMIDSGVRPNYITFVSVLAA 397
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/635 (27%), Positives = 287/635 (45%), Gaps = 102/635 (16%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R + +++ Y+K +T A+ LFD RD V +N+++ Y+ +G + A LF
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS-RNGYECDAWKLFIV 141
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M + TL +L + V G+ +H K+ +L ++LI YSKC
Sbjct: 142 M--LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
A V ++ + TVSWNT+I
Sbjct: 200 AELGSA---------------------------------EVLFREMKDKSTVSWNTMIGA 226
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA--------CTGLKC----------- 224
Y Q+G E A+T+F M EK +E + T+ ++LSA C +KC
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTS 286
Query: 225 -----LKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAESVYA---------- 268
+ G V A L + V + IV Y + G+M A ++
Sbjct: 287 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 346
Query: 269 ------------------------GIGIKSPFATSSLIAG-----YSSKGNMTKAKRLFD 299
G IKS T +L+ YS ++ LF+
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
L E + W ++ SG V+S + F++F + T L+PD + I ++L C+ L+
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
LGK+ H Y LR + + +AL+DMY+KCGN AE F+ + +N MI+G
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT--WNSMISG 524
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
Y+ G +++A+ + EM + LKPD ITF+ +LSAC H G V+ G+ F +M +++ + P
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEEL 539
+ HYA MV + GR +A+ + K+ I+ D+++WGA L+AC I+ + + ++
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 540 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
++ NG YV ++N+YA E W+++ R+R M+
Sbjct: 645 FMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 265/500 (53%), Gaps = 43/500 (8%)
Query: 94 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 153
GK++H+ ++KT L+ ++ KCG A VF D + K + A
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVF-------DELPKPTLSA--- 102
Query: 154 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 213
+N +I+GY+++G ++ L L M G + + +TL+
Sbjct: 103 -----------------------YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 214 SVLSAC-----TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA 268
VL A T + L + VHA ++K D + + + +VD Y K G + A +V+
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKS-QQCEAVFK 327
+ ++ +S+I+GY ++G + A+ +F++ ++ VV+ A+ G+ +S + +
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMY 387
++ + P+ +V+GAC++ + +G+Q HA I+++ + K+ S+L+DMY
Sbjct: 260 MYISMQRA-GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 388 SKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
+KCG I A + F + +++V + MI GY +G +A++LF M + ++P+ +T
Sbjct: 319 AKCGGINDARRVFDQM--QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 448 FVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
F+ LSAC H GLV+ G + F SM+ DY++ P++ HYAC+VD+ GR L KA EF R +
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 508 PIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEAD-NGSRYVQLANVYAAEGKWNEM 566
P + D+ IW A L++C ++ N L A EL K+ AD Y+ L+NVYA+ KW+ +
Sbjct: 437 PERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNV 496
Query: 567 GRIRKEMRGKEATKLPGCSW 586
+IR+ M+ + +K G SW
Sbjct: 497 SKIREVMKRRRISKTIGRSW 516
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 22/354 (6%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
+++ ++K L+ AR +FD L +YN M+S Y G L L RM + +
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL-KHGLVKELLLLVQRMSYSGEK- 132
Query: 72 GMDEITLTTMLNLSAK-------LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
D TL+ +L S R +C + +H+ ++K +L +++L+D Y K G
Sbjct: 133 -ADGYTLSMVLKASNSRGSTMILPRSLC--RLVHARIIKCDVELDDVLITALVDTYVKSG 189
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A VF ++V +M++ G ++ A +F + D V +N ++ G+
Sbjct: 190 KLESARTVFETMKD-ENVVCCTSMISGYMNQGFVEDAEEIF-NTTKVKDIVVYNAMVEGF 247
Query: 185 VQNGYM-ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
++G +R++ ++I M G N T ASV+ AC+ L ++G+ VHA ++K+ ++
Sbjct: 248 SRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTH 307
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS- 302
+ S ++D Y KCG + A V+ + K+ F+ +S+I GY GN +A LF +
Sbjct: 308 IKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE 367
Query: 303 ---ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT---MIIVNVLG 350
E NYV + S S + +++F + ++ P IV+++G
Sbjct: 368 FRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMG 421
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M N ++I Y+ + A +F++ +D+V YN+M+ ++ + ++D+
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ MQ R + T +++ + L G+Q+H+ ++K+ SSL+DMY
Sbjct: 261 YISMQ--RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG +A VF D + + NVF SW ++
Sbjct: 319 AKCGGINDARRVF-------DQMQEK----------------NVF----------SWTSM 345
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
I GY +NG E AL LF M E IE N T LSAC+
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 151/381 (39%), Gaps = 89/381 (23%)
Query: 226 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 285
K GK +HA ++K + +S ++ + KCG + YA V+ + + A + +I+GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 286 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
G K L + +Y A GY S +A R + ++P
Sbjct: 111 LKHG---LVKELLLLVQRMSYSGEKA--DGYTLSMVLKA-----SNSRGSTMILPR---- 156
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
SL + HA I++ + +D+ L +ALVD Y K G + A F+ + D
Sbjct: 157 -------------SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 406 SD-----------------------------RDVILYNVMIAGYAHHG-FENKAIQLFQE 435
+ +D+++YN M+ G++ G +++ ++
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 436 MLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM------------------------ 471
M + P+ TF +++ AC E+G++ +
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 472 ----KEDYNVLPE--IYHYACMVDMYGRGNQLEKAVE-FMRKIPIQIDASIWGAFLNACK 524
+ ++ + E ++ + M+D YG+ E+A+E F R +I+ + + FL A
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN-YVTFLGALS 382
Query: 525 INNNTTLVKQAEEELLKVEAD 545
+++ LV + E ++ D
Sbjct: 383 ACSHSGLVDKGYEIFESMQRD 403
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/680 (25%), Positives = 313/680 (46%), Gaps = 136/680 (20%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ F+WN +I+AY + L+ A LF S ++ +S+N+++S Y + G A +L
Sbjct: 54 MPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKS-GSKVEAFNL 112
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQS D I +E TL ++L + L ++ G+Q+H + +KT DL ++ L+ MY
Sbjct: 113 FWEMQS--DGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMY 170
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++C EA +F +G KN V+W ++
Sbjct: 171 AQCKRISEAEYLFETMEG-----EKN---------------------------NVTWTSM 198
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
+ GY QNG+ +A+ F ++ +G + NQ+T SVL+AC + ++G VH ++K+
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+N +V S ++D Y KC M A ++ G+ + + +S+I G +G + +A +F
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT-LS 359
+ ER+ + D I ++L A+ T +
Sbjct: 319 MHERDMKI--------------------------------DDFTIPSILNCFALSRTEMK 346
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
+ H I++T + + +ALVDMY+K G + A K F+ + ++DVI + ++ G
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMI--EKDVISWTALVTG 404
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK---------FFMS 470
H+G ++A++LF M + PD I ++LSA L+E G++ F S
Sbjct: 405 NTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS 464
Query: 471 MK---------------EDYNV------LPEIYHYACMVDMYGRGNQLE----------- 498
+ ED NV + ++ + C++ Y + LE
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRT 524
Query: 499 -------------------------KAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVK 533
K + + ++ ++ DA++W A L A + + N +
Sbjct: 525 VYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE 584
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
+A + L+++E +N YVQL+N+Y+A G+ +E +R+ M+ + +K PGCSW+ + +
Sbjct: 585 RAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKV 644
Query: 594 HVFTSGDTSHSKADAIYSTL 613
H F S D H + IYS +
Sbjct: 645 HSFMSEDRRHPRMVEIYSKV 664
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 148/303 (48%), Gaps = 11/303 (3%)
Query: 222 LKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 281
L G C+H+ + SN + K G + A ++ + + F +++
Sbjct: 11 LPLKPFGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTM 65
Query: 282 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
I YS+ ++ A++LF S +N + W AL SGY KS F LF E + ++ + P+
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKPN 124
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 401
+ +VL C L G+Q H + ++T ++D + + L+ MY++C I+ AE F+
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
+ + +++ + + M+ GY+ +GF KAI+ F+++ + + + TF ++L+AC
Sbjct: 185 TM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 462 ELGEKFFMSM-KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+G + + K + IY + ++DMY + ++E A + + + D W + +
Sbjct: 244 RVGVQVHCCIVKSGFKT--NIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMI 300
Query: 521 NAC 523
C
Sbjct: 301 VGC 303
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 245/441 (55%), Gaps = 8/441 (1%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKG--IEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
N++I + ++ E++ + ++ G ++ + +T+ ++ ACTGL+ + G VH +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
++ ++ V +G++ Y + G + V+ I ++++ + G++ A+
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
+LF+ + ER+ + W A+ SGY + + +F E + + + +++VL AC
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVF-HLMQLEGVKVNGVAMISVLSACTQL 253
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
L G+ H+YI R K+ + +LA+ LVD+Y+KCG++ A + F + +++V ++
Sbjct: 254 GALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM--EEKNVYTWSS 311
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
+ G A +GF K ++LF M + + P+A+TFV++L C G V+ G++ F SM+ ++
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
+ P++ HY C+VD+Y R +LE AV ++++P++ A++W + L+A ++ N L A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
+++L++E N YV L+N+YA W+ + +R+ M+ K K PGCS + V +H
Sbjct: 432 SKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHE 491
Query: 596 FTSGDTSHSK---ADAIYSTL 613
F GD SH K DA++ +
Sbjct: 492 FFVGDKSHPKYTQIDAVWKDI 512
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 192/445 (43%), Gaps = 74/445 (16%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
L A + D + L + NSM+ A+ + + + D + R+ S+ + + D T+ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEK-SFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+ LR+ G Q+H ++ D + LI +Y++ G + VF+ D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIP-CPD 173
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
V + AMV AC R G + A +F PE D ++WN +I+GY Q G AL +F M
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPE-RDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
+G++ N + SVLSACT L L G+ H+ + +N +++ +VD Y KCG+M
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 321
A V+ G+ K+ + SS + G + G ++
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGF----------------------------GEK 324
Query: 322 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA- 380
C +F L ++ + + P+ + V+VL C++ + G Q H +R + ++ +L
Sbjct: 325 CLELFSLMKQ----DGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEH 379
Query: 381 -SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
LVD+Y++ G + A+ + Q+M
Sbjct: 380 YGCLVDLYARAGRL---------------------------------EDAVSIIQQM--- 403
Query: 440 SLKPDAITFVALLSACRHRGLVELG 464
+KP A + +LL A R +ELG
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELG 428
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
A++ A + ++ AR LF+ RD +++N+M+S YA G AL++F MQ +
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQV-GESREALNVFHLMQ--LEG 235
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
+ ++ + + ++L+ +L + G+ HSY+ + ++ ++L+D+Y+KCG
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD----- 290
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
M+ A+ VFW E N +W++ + G NG+
Sbjct: 291 ---------------------------MEKAMEVFWGMEEKN-VYTWSSALNGLAMNGFG 322
Query: 191 ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND-GCSNQFVSSG 249
E+ L LF M + G+ N T SVL C+ + + G+ H ++N+ G Q G
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYG 381
Query: 250 -IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLI 282
+VD Y + G + A S+ + +K A SSL+
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/593 (28%), Positives = 289/593 (48%), Gaps = 41/593 (6%)
Query: 28 LFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAK 87
LFD RD+ S+N+++S+ +G A DLF M + G+D TL+T+L+
Sbjct: 240 LFDEIPQRDVASWNTVVSSLV-KEGKSHKAFDLFYEMNRV-EGFGVDSFTLSTLLSSCTD 297
Query: 88 LRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNA 147
V+ G+++H ++ ++LI YSK ++ +++ D V+
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ-DAVTFTE 356
Query: 148 MVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY 207
M+ A G +D A+ +F E N T+++N L+AG+ +NG+ +AL LF +M+++G+E
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKN-TITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 208 NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY 267
+L S + AC + K+ + +H +K N + + ++D +C M AE ++
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 268 A--GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAV 325
+ S AT+S+I GY+ G KA LF LC
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHR----------TLCE----------- 514
Query: 326 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 385
+ L D + + +L C +G Q H Y L+ D L ++L+
Sbjct: 515 ----------QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 386 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 445
MY+KC + A K F T + DVI +N +I+ Y ++A+ L+ M + +KPD
Sbjct: 565 MYAKCCDSDDAIKIFN--TMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 446 ITFVALLSACRHRGLVELG--EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
IT ++SA R+ +L F+SMK Y++ P HY V + G LE+A +
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
+ +P+Q + S+ A L++C+I++NT++ K+ + +L + + S Y+ +N+Y+A G W
Sbjct: 683 INSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 564 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
+ IR+EMR + K P SWI EN IH F + DTSH + IY L L
Sbjct: 743 HRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 217/458 (47%), Gaps = 38/458 (8%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA+I Y+K +A +F S S +VSY +++S ++ + + AL +F RM+ A
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLN-LEIEALKVFFRMRKA-G 175
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ +E T +L ++ G Q+H +VK+ S F +SL+ +Y K
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK------- 228
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+ S CD V L +F + P+ D SWNT+++ V+ G
Sbjct: 229 -DSGSSCDDV----------------------LKLFDEIPQ-RDVASWNTVVSSLVKEGK 264
Query: 190 MERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+A LF EM +G + TL+++LS+CT L G+ +H ++ V++
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ FY K +M+ ES+Y + + + +I Y S G + A +F +++E+N +
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
+ AL +G+ ++ KLF + + D + + + AC + + + +Q H +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTD-FSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVILYNVMIAGYAHHGFEN 427
++ + + +AL+DM ++C +A AE+ F Q ++ D ++ I GYA +G +
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSI-IGGYARNGLPD 502
Query: 428 KAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELG 464
KA+ LF L + L D ++ +L+ C G E+G
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/452 (19%), Positives = 197/452 (43%), Gaps = 61/452 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M ++A ++ +I AY+ + A +F + + ++ ++YN++++ + +G AL L
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFC-RNGHGLKALKL 404
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M + + + + +LT+ ++ + +Q+H + +K + ++L+DM
Sbjct: 405 FTDM--LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC 462
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
++C +A +F W + + + + ++
Sbjct: 463 TRCERMADAEEMFDQ------------------------------WPS-NLDSSKATTSI 491
Query: 181 IAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
I GY +NG ++A++LF + E+ + ++ +L +L+ C L ++G +H LK
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAG 551
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
S+ + + ++ Y KC + A ++ + + +SLI+ Y + N +A L+
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWS 611
Query: 300 SLSER----NYVVWTALCSG--YVKSQQCEAVFKLFREFRTTEALIPDT---MIIVNVLG 350
++E+ + + T + S Y +S + + LF +T + P T V VLG
Sbjct: 612 RMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 351 ACAI----QATL-SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
+ + T+ S+ Q +LR AL+D N + A++ +L+
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLR-----------ALLDSCRIHSNTSVAKRVAKLILS 720
Query: 406 SDRDVILYNVMIAG-YAHHGFENKAIQLFQEM 436
+ + ++ + Y+ GF +++ + +EM
Sbjct: 721 TKPETPSEYILKSNIYSASGFWHRSEMIREEM 752
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 250/498 (50%), Gaps = 37/498 (7%)
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
+ MYSK G F A V+ G + +S N ++ R G + A VF + P+ T +
Sbjct: 1 MSMYSKLGDFPSAVAVY-GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT-T 58
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN +IAG +Q + E L+LF EM G +++TL SV S GL+ + +G+ +H +
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K + V+S + Y + G ++ E V
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIV------------------------------ 148
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
S+ RN V W L G ++ E V L++ + + P+ + V VL +C+ A
Sbjct: 149 -IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTVLSSCSDLA 206
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
G+Q HA ++ + + S+L+ MYSKCG + A K+F D D ++++ M
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMWSSM 264
Query: 417 IAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
I+ Y HG ++AI+LF M + +++ + + F+ LL AC H GL + G + F M E Y
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQA 535
P + HY C+VD+ GR L++A +R +PI+ D IW L+AC I+ N + ++
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHV 595
+E+L+++ ++ + YV LANV+A+ +W ++ +RK MR K K G SW + +H
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 596 FTSGDTSHSKADAIYSTL 613
F GD S SK+ IYS L
Sbjct: 445 FKMGDRSQSKSKEIYSYL 462
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 196/471 (41%), Gaps = 80/471 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M +N S N +I Y++A +L AR +FD R L ++N+M++ + + L L
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFE-FNEEGLSL 78
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M DE TL ++ + SA LR V G+Q+H Y +K +L SSL MY
Sbjct: 79 FREMHGL--GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 136
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+ G +DG+ + ++ + V+WNTL
Sbjct: 137 MRNGKL---------------------------QDGE------IVIRSMPVRNLVAWNTL 163
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G QNG E L L+ M G N+ T +VLS+C+ L G+ +HA +K
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
S V S ++ Y KCG + G+ KA F
Sbjct: 224 SSVVAVVSSLISMYSKCGCL----------------------------GDAAKA---FSE 252
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ + V+W+++ S Y Q + +LF + + + +N+L AC+
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 312
Query: 361 GKQTHAYIL-RTKLNMDEKLASALVDMYSKCGNIAYAE---KSFQLVTDSDRDVILYNVM 416
G + ++ + K + +VD+ + G + AE +S + T D++++ +
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT----DIVIWKTL 368
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL----LSACRHRGLVEL 463
++ H A ++F+E+L+I D+ +V L SA R R + E+
Sbjct: 369 LSACNIHKNAEMAQRVFKEILQID-PNDSACYVLLANVHASAKRWRDVSEV 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 263/509 (51%), Gaps = 38/509 (7%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
N + AC ++D+A++ + E N V +N L G+V + R+L L++ M+ +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFV-YNALFKGFVTCSHPIRSLELYVRMLRDSV 867
Query: 206 EYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAES 265
+ +T +S++ A + + G+ + A + K + + + ++DFY G +R A
Sbjct: 868 SPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARK 925
Query: 266 VYAGIGIKSPFA-------------------------------TSSLIAGYSSKGNMTKA 294
V+ + + A ++ LI GY GN+ +A
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 295 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 354
+ LF+ + ++ + WT + GY ++++ +F + E +IPD + + V+ ACA
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIPDEVTMSTVISACAH 1044
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
L +GK+ H Y L+ +D + SALVDMYSKCG++ A F +++ +N
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWN 1102
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
+I G A HGF +A+++F +M S+KP+A+TFV++ +AC H GLV+ G + + SM +D
Sbjct: 1103 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQ 534
Y+++ + HY MV ++ + + +A+E + + + +A IWGA L+ C+I+ N + +
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEI 1222
Query: 535 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKL-PGCSWIYVENGI 593
A +L+ +E N Y L ++YA + +W ++ IR MR K+ PG S I ++
Sbjct: 1223 AFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRD 1282
Query: 594 HVFTSGDTSHSKADAIYSTLVCLYGKLYL 622
H+F + D SHS +D + L +Y ++ L
Sbjct: 1283 HLFAAADKSHSASDEVCLLLDEIYDQMGL 1311
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 214/490 (43%), Gaps = 113/490 (23%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
+L+L+ RM RD++ T ++++ S+ +G+ + +++ K ++L
Sbjct: 855 SLELYVRM--LRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTL 910
Query: 117 IDMYSKCGSFREAYNVF---------------SGCDGVVDLVS----------KNAMVAA 151
ID YS G REA VF S V+D+ S KN +
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSN 970
Query: 152 CCRDGKM-----DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
C +G M + A ++F + P D +SW T+I GY QN A+ +F +M+E+GI
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMP-VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 207 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 266
++ T+++V+SAC L L++GK VH L+N + ++ S +VD Y KCG++ A V
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 326
+ + K+ F +S+I G ++ G +A ++F +
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME------------------------ 1125
Query: 327 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM 386
E++ P+ + V+V AC THA + ++ ++ +++D
Sbjct: 1126 --------MESVKPNAVTFVSVFTAC-----------THAGL----VDEGRRIYRSMIDD 1162
Query: 387 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 446
YS N+ + Y M+ ++ G +A++L M +P+A+
Sbjct: 1163 YSIVSNVEH-----------------YGGMVHLFSKAGLIYEALELIGNM---EFEPNAV 1202
Query: 447 TFVALLSACR-HRGLVELGEKFFMSMKEDYNVLPEIY--HYACMVDMYGRGNQLEKAVEF 503
+ ALL CR H+ LV + E F + VL + +Y +V MY N+ E
Sbjct: 1203 IWGALLDGCRIHKNLV-IAEIAFNKLM----VLEPMNSGYYFLLVSMYAEQNRWRDVAEI 1257
Query: 504 ---MRKIPIQ 510
MR++ I+
Sbjct: 1258 RGRMRELGIE 1267
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 67/316 (21%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M +N + N +I Y+ NL QA +LF+ +D++S+ +M+ Y+ + A+ +
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS-QNKRYREAIAV 1019
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F +M + I DE+T++T+++ A L V+ GK++H Y ++ L + S+L+DMY
Sbjct: 1020 FYKMM--EEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY 1077
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCGS ++ AL VF+ P+ N WN++
Sbjct: 1078 SKCGS--------------------------------LERALLVFFNLPKKN-LFCWNSI 1104
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I G +G+ + AL +F +M + ++ N T SV +ACT + G+ ++
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY-------- 1156
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
++D Y N+ + Y G ++ +S G + +A L +
Sbjct: 1157 -------RSMIDDYSIVSNVEH----YGG-----------MVHLFSKAGLIYEALELIGN 1194
Query: 301 LS-ERNYVVWTALCSG 315
+ E N V+W AL G
Sbjct: 1195 MEFEPNAVIWGALLDG 1210
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/620 (27%), Positives = 286/620 (46%), Gaps = 83/620 (13%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
PH + ++ +I Y +++ L A LFD RD+VS+NSM+S +T A+ LF
Sbjct: 64 PHVSLYT--KMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNT-AVKLF 120
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M ++ T M+N C+
Sbjct: 121 DEMPER------SVVSWTAMVN-------GCF---------------------------- 139
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
+ G +A +F V D + N+MV + GK+D AL +F + P N +SW T+I
Sbjct: 140 RSGKVDQAERLFYQMP-VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN-VISWTTMI 197
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
G QN AL LF M+ I+ V++AC +G VH L++K
Sbjct: 198 CGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFL 257
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
++VS+ ++ FY C + ++++FD
Sbjct: 258 YEEYVSASLITFYANCKRI-------------------------------GDSRKVFDEK 286
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
VWTAL SGY +++ E +F +++P+ + L +C+ TL G
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSCSALGTLDWG 345
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
K+ H ++ L D + ++LV MYS GN+ A F + + ++ +N +I G A
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSWNSIIVGCA 403
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP-E 480
HG A +F +M++++ +PD ITF LLSAC H G +E G K F M N + +
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRK 463
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
I HY CMVD+ GR +L++A E + ++ ++ + +W A L+AC+++++ ++A +
Sbjct: 464 IQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
+++ + + YV L+N+YA+ G+W+ + ++R +M+ K PG SW+ + H F SGD
Sbjct: 524 NLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD 583
Query: 601 TSHSKADAIYSTLVCLYGKL 620
H IY L L KL
Sbjct: 584 QPH--CSRIYEKLEFLREKL 601
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 299/598 (50%), Gaps = 83/598 (13%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+I+ Y + +L+ AR LFD S RD++S++ ++ +Y + V L LF M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKE-PVVGLKLFKEMVHEAK 221
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGSFRE 128
T D +T+T++L + + G+ +H + ++ DL+ F +SLIDMYSK
Sbjct: 222 T-EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A+ VF CR+ VSWN+++AG+V N
Sbjct: 281 AFRVFD---------------ETTCRN------------------IVSWNSILAGFVHNQ 307
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ AL +F M+++ +E ++ T+ S+L C + K +H ++++ SN+
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV--- 364
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
A SSLI Y+S + A + DS++ ++ V
Sbjct: 365 ----------------------------ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
+ + SG + + + +F R T P+ + ++++L AC++ A L K H
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 369 LRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
+R L + D + +++VD Y+KCG I A ++F +T+ +++I + V+I+ YA +G +
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITE--KNIISWTVIISAYAINGLPD 510
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYAC 486
KA+ LF EM + P+A+T++A LSAC H GLV+ G F SM +ED+ P + HY+C
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSC 568
Query: 487 MVDMYGRGNQLEKAVEFMRKIP--IQIDASIWGAFLNACKINNNTTLVKQAE--EELLKV 542
+VDM R +++ AVE ++ +P ++ AS WGA L+ C+ N L+ +E E+L++
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCR-NRFKKLIITSEVVAEVLEL 627
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGD 600
E S Y+ ++ +AAE W ++ +R+ ++ ++ + G S + N F +GD
Sbjct: 628 EPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 171/411 (41%), Gaps = 83/411 (20%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F N++I Y K ++ A +FD + R++VS+NS+L+ + D AL++F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDE-ALEMFHLM 319
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
++ + +DE+T+ ++L + K +H +++ + ++ ALSSLID Y+ C
Sbjct: 320 --VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS 377
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+A V D+VS + M++ G+ D A+++F DT
Sbjct: 378 LVDDAGTVLDSMT-YKDVVSCSTMISGLAHAGRSDEAISIF---CHMRDTP--------- 424
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
N T+ S+L+AC+ L+ K H + ++ N
Sbjct: 425 -----------------------NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 245 F-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
V + IVD Y KCG + A+R FD ++E
Sbjct: 462 ISVGTSIVDAYAKCGAIEM-------------------------------ARRTFDQITE 490
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+N + WT + S Y + + LF E + + P+ + + L AC + G
Sbjct: 491 KNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLVKKG-- 547
Query: 364 THAYILRTKLNMDEKLA----SALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
I ++ + D K + S +VDM S+ G I + + +L+ + DV
Sbjct: 548 --LMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI---DTAVELIKNLPEDV 593
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 262 YAESVYAGIGIKSPFA----------TSSLIAG------YSSKGNMTKAKRLFDSLSERN 305
Y+E AG+ PF S L G Y G++ R FD ++ R+
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRD 91
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V W + G + E F + R P+T +V V+ AC ++ G++ H
Sbjct: 92 SVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GFEPNTSTLVLVIHAC--RSLWFDGEKIH 148
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
Y++R+ + ++++ MY+ +++ A K F + S+RDVI ++V+I Y
Sbjct: 149 GYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEM--SERDVISWSVVIRSYVQSKE 205
Query: 426 ENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYH 483
++LF+EM+ + +PD +T ++L AC +++G S++ ++ L +++
Sbjct: 206 PVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD-LADVFV 264
Query: 484 YACMVDMYGRGNQLEKA 500
++DMY +G ++ A
Sbjct: 265 CNSLIDMYSKGFDVDSA 281
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/584 (29%), Positives = 284/584 (48%), Gaps = 83/584 (14%)
Query: 10 NAIIMAYIK-AHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALDLFARMQSA 67
N+++ Y K + + R +FD +D +S+ SM+S Y G + V AL++F M S
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV--TGKEHVKALEVFVEMVS- 156
Query: 68 RDTIGMD--EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 125
G+D E TL++ + ++L V G+ H ++ + + F S+L +Y G
Sbjct: 157 ---FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY---GV 210
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 185
RE + A VF + PE D + W +++ +
Sbjct: 211 NREPVD-----------------------------ARRVFDEMPE-PDVICWTAVLSAFS 240
Query: 186 QNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+N E AL LF M KG+ + T +VL+AC L+ LK GK +H ++ N SN
Sbjct: 241 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 300
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
V S ++D Y KCG++R +A+++F+ +S++
Sbjct: 301 VVESSLLDMYGKCGSVR-------------------------------EARQVFNGMSKK 329
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N V W+AL GY ++ + E ++FRE D VL ACA A + LGK+
Sbjct: 330 NSVSWSALLGGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGKEI 384
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H +R + + SAL+D+Y K G I A + + + S R++I +N M++ A +G
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM--SIRNMITWNAMLSALAQNG 442
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
+A+ F +M+K +KPD I+F+A+L+AC H G+V+ G +F+ M + Y + P HY
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV-KQAEEELLKVE 543
+CM+D+ GR E+A + + + DAS+WG L C N + + V ++ + ++++E
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
YV L+N+Y A G+ + IRK M + K G SWI
Sbjct: 563 PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 175/420 (41%), Gaps = 78/420 (18%)
Query: 5 NAFSWNAII---MAYIKAHN--LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALD 59
+ F WN I +AY+ N AR +FD D++ + ++LSA++ D + AL
Sbjct: 192 HGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE-ALG 250
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
LF M + + D T T+L LR + GK++H ++ + SSL+DM
Sbjct: 251 LFYAMHRGKGLV-PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y KCGS REA VF+G + KN+ V W +
Sbjct: 310 YGKCGSVREARQVFNG------MSKKNS----------------VSW-----------SA 336
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
L+ GY QNG E+A+ +F EM EK + + +VL AC GL ++LGK +H ++
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
N V S ++D Y K G + A R++
Sbjct: 393 CFGNVIVESALIDLYGK-------------------------------SGCIDSASRVYS 421
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+S RN + W A+ S ++ + E F + + + PD + + +L AC +
Sbjct: 422 KMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGMVD 480
Query: 360 LGKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
G+ + ++ + + S ++D+ + G AE + + D L+ V++
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER-AECRNDASLWGVLLG 539
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 47/302 (15%)
Query: 334 TTEALIPDT-MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
T + IP T + ++L C + G Q HA+++++ L D + ++L+ +Y K G
Sbjct: 52 THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP 111
Query: 393 IAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
+ + V D +D I + M++GY KA+++F EM+ L + T +
Sbjct: 112 ---GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSS 168
Query: 451 LLSACRHRGLVELGEKF-------------FMS---------------MKEDYNVLPE-- 480
+ AC G V LG F F+S + ++ +PE
Sbjct: 169 AVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPD 228
Query: 481 IYHYACMVDMYGRGNQLEKAVEFM----RKIPIQIDASIWGAFLNACKINNNTTLVKQAE 536
+ + ++ + + + E+A+ R + D S +G L AC N +KQ +
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC---GNLRRLKQGK 285
Query: 537 EELLKVEADN-GSRYV---QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 592
E K+ + GS V L ++Y G E ++ M K + Y +NG
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNG 345
Query: 593 IH 594
H
Sbjct: 346 EH 347
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 226/369 (61%), Gaps = 10/369 (2%)
Query: 258 GNMRYAESVYAGIGIKSPFAT-----SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
++R E++++ + I+S F + +SL+ Y++ G++ A ++FD + E++ V W ++
Sbjct: 2 ADVRLGETIHSVV-IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
+G+ ++ + E L+ E ++ + PD IV++L ACA L+LGK+ H Y+++
Sbjct: 61 INGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
L + ++ L+D+Y++CG + A+ F + D ++ + + +I G A +GF +AI+L
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 433 FQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
F+ M L P ITFV +L AC H G+V+ G ++F M+E+Y + P I H+ CMVD+
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 492 GRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 551
R Q++KA E+++ +P+Q + IW L AC ++ ++ L + A ++L++E ++ YV
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 552 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYS 611
L+N+YA+E +W+++ +IRK+M K+PG S + V N +H F GD SH ++DAIY+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 612 TLVCLYGKL 620
L + G+L
Sbjct: 358 KLKEMTGRL 366
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 160/366 (43%), Gaps = 78/366 (21%)
Query: 94 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACC 153
G+ +HS ++++ + +SL+ +Y+ CG AY VF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD------------------- 47
Query: 154 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 213
K PE D V+WN++I G+ +NG E AL L+ EM KGI+ + T+
Sbjct: 48 -------------KMPE-KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 93
Query: 214 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
S+LSAC + L LGK VH ++K N S+ ++D Y +CG + A
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA---------- 143
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
K LFD + ++N V WT+L G + + +LF+
Sbjct: 144 ---------------------KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 334 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI--LRTKLNMDEKLA--SALVDMYSK 389
+TE L+P + V +L AC + + K+ Y +R + ++ ++ +VD+ ++
Sbjct: 183 STEGLLPCEITFVGILYAC---SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 390 CGNIAYAEKSFQLVT--DSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAIT 447
G + +K+++ + +V+++ ++ HG + + F + + L+P+
Sbjct: 240 AGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSG 294
Query: 448 FVALLS 453
LLS
Sbjct: 295 DYVLLS 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y ++ A +FD +DLV++NS+++ +A +G AL L+ M S
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA-ENGKPEEALALYTEMNS--K 83
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I D T+ ++L+ AK+ + GK++H YM+K + + + L+D+Y++CG EA
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F ++V KN +VSW +LI G NG+
Sbjct: 144 KTLFD------EMVDKN---------------------------SVSWTSLIVGLAVNGF 170
Query: 190 MERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLG 228
+ A+ LF M +G+ + T +L AC+ +K G
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 241/466 (51%), Gaps = 50/466 (10%)
Query: 170 EFNDTVSWNTLIAGYVQN-GYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKL 227
E + + WNTLI + E A L+ +M+E+G ++HT VL AC +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 228 GKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
GK VH ++K+ + +V++G++ Y CG + A
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA------------------------ 205
Query: 288 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
+++FD + ER+ V W ++ V+ + ++ +LFRE + + PD + +
Sbjct: 206 -------RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQS 256
Query: 348 VLGACAIQATLSLGKQTHAYILR---TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
VL ACA +LSLG HA++LR + MD + ++L++MY KCG++ AE+ FQ +
Sbjct: 257 VLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM- 315
Query: 405 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEML--KISLKPDAITFVALLSACRHRGLVE 462
RD+ +N MI G+A HG +A+ F M+ + +++P+++TFV LL AC HRG V
Sbjct: 316 -QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
G ++F M DY + P + HY C+VD+ R + +A++ + +P++ DA IW + L+A
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 523 -CKINNNTTLVKQAEEELLKVEADNGSR-------YVQLANVYAAEGKWNEMGRIRKEMR 574
CK + L ++ ++ + DN S YV L+ VYA+ +WN++G +RK M
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 575 GKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
K PGCS I + H F +GDTSH + IY L + +L
Sbjct: 495 EHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRL 540
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 286 SSKGNMTKAKRLFDSLSERNYVVWTAL---CSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
SS ++ A R+FDS+ + +W L C+ V + E F L+R+ PD
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRK--EEAFMLYRKMLERGESSPDK 151
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
VL ACA S GKQ H I++ D + + L+ +Y CG + A K F
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ +R ++ +N MI G + A+QLF+EM + S +PD T ++LSAC G +
Sbjct: 212 MP--ERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLS 268
Query: 463 LGE--KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
LG F+ K D +V ++ +++MY + L A + + + + D + W A +
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-DLASWNAMI 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I Y L AR +FD R LVS+NSM+ A D+ AL LF MQ + +
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREMQRSFE 248
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFAL--SSLIDMYSKCGSF 126
D T+ ++L+ A L + G H+++++ + D++ L +SLI+MY KCGS
Sbjct: 249 P---DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT------L 180
R A VF G DL S NAM+ G+ + A+N F + + + V N+ L
Sbjct: 306 RMAEQVFQGMQK-RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Query: 181 IA----GYVQNGYMERALTLFIEMIEKGIEY 207
IA G+V G + + IE +E+
Sbjct: 365 IACNHRGFVNKGRQYFDMMVRDYCIEPALEH 395
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I Y K +L A +F RDL S+N+M+ +A G A++ F RM R+
Sbjct: 293 NSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA-THGRAEEAMNFFDRMVDKRE 351
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVK---TANDLSKFALSSLIDMYSKCGSF 126
+ + +T +L V G+Q MV+ L + ++D+ ++ G
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG--CIVDLIARAGYI 409
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDG 156
EA ++ D V +++ ACC+ G
Sbjct: 410 TEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 275/580 (47%), Gaps = 82/580 (14%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+++ Y K L A LF + RD+VS+++M+++Y A D A+ LF M R
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE-AISLFRDMM--RI 395
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I + +TLT++L A + GK +H Y +K + +++I MY+KCG F A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
L F + P D V++N L GY Q G
Sbjct: 456 --------------------------------LKAFERLP-IKDAVAFNALAQGYTQIGD 482
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+A ++ M G+ + T+ +L C G CV+ ++K+ S V+
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+++ + KC + A ++ G E++ V W
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGF------------------------------EKSTVSW 572
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ +GY+ Q E FR+ + E P+ + VN++ A A + L +G H+ ++
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKV-EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ + ++LVDMY+KCG I +EK F + S++ ++ +N M++ YA HG + A
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--IEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
+ LF M + LKPD+++F+++LSACRH GLVE G++ F M E + + E+ HYACMVD
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+ G+ +AVE MR++ ++ +WGA LN+ +++ N L A +L+K+E N S
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH 809
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 589
Y Q + G+ N + RI+ K+P CSWI V
Sbjct: 810 YSQDRRL----GEVNNVSRIK---------KVPACSWIEV 836
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 222/510 (43%), Gaps = 80/510 (15%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
PH N +I AY +R +FDS +V +NSM+ Y A G AL F
Sbjct: 35 PH------NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA-GLHREALGFF 87
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M S I D+ + T L A G ++H + + + + ++L++MY
Sbjct: 88 GYM-SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYC 146
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
K A VF KM + V W NT++
Sbjct: 147 KARDLVSARQVFD----------------------KMHVKDVVTW-----------NTMV 173
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
+G QNG AL LF +M ++ + +L +++ A + L+ + +C+H LV+K G
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK-GF 232
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
F SSG++D YC C ++ AESV+ + K + +++A Y+ G + LFD +
Sbjct: 233 IFAF-SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
RNY + R + + +G L G
Sbjct: 292 --RNY------------------------DVRMNKVAAASALQAAAYVG------DLVKG 319
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
H Y ++ L D +A++L+ MYSKCG + AE+ F + DRDV+ ++ MIA Y
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF--INIEDRDVVSWSAMIASYE 377
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPE 480
G ++AI LF++M++I +KP+A+T ++L C LG+ ++K D + E
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD--IESE 435
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 510
+ ++ MY + + A++ ++PI+
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 221/519 (42%), Gaps = 85/519 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
A++ Y KA +L AR +FD +D+V++N+M+S A +GC + AL LF M+S
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLA-QNGCSSAALLLFHDMRSC-- 195
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFRE 128
+ +D ++L ++ +KL + +H ++K FA SS LIDMY C
Sbjct: 196 CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG---FIFAFSSGLIDMYCNCADLYA 252
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG 188
A +VF W+ D SW T++A Y NG
Sbjct: 253 AESVFEE-----------------------------VWRK----DESSWGTMMAAYAHNG 279
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ E L LF M + N+ AS L A + L G +H ++ + V++
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y KCG + AE ++ I + + S++IA Y G
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAG------------------- 380
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
Q EA+ LFR+ + P+ + + +VL CA A LGK H Y
Sbjct: 381 -----------QHDEAI-SLFRDMMRIH-IKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++ + + + A+A++ MY+KCG + A K+F+ + +D + +N + GY G NK
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPALKAFERLP--IKDAVAFNALAQGYTQIGDANK 485
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRH-----RGLVELGEKFFMSMKEDYNVLPEIYH 483
A +++ M + PD+ T V +L C RG G+ +K ++ + H
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ----IIKHGFDSECHVAH 541
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+++M+ + + L A+ K + W +N
Sbjct: 542 --ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 187/451 (41%), Gaps = 86/451 (19%)
Query: 114 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEF 171
++L+ M +C +FR V G V L N ++ A + D++ +F ++P
Sbjct: 6 TNLLLMLRECKNFRCLLQV-HGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDP-- 62
Query: 172 NDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKC 230
V WN++I GY + G AL F M E KGI+ ++++ L AC G K G
Sbjct: 63 -GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 231 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
+H L+ + S+ ++ + +V+ YCK +
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCK-------------------------------ARD 150
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
+ A+++FD + ++ V W + SG ++ A LF + R+ I D + + N++
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI-DHVSLYNLIP 209
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
A + + + H +++ +S L+DMY C ++ AE F+ V D
Sbjct: 210 AVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEM---------------------------------- 436
+ M+A YAH+GF + ++LF M
Sbjct: 268 --WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 437 -LKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 495
++ L D +L+S G +E+ E+ F+++ ED +V+ ++ M+ Y +
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI-EDRDVVS----WSAMIASYEQAG 380
Query: 496 QLEKAVEFMR---KIPIQIDASIWGAFLNAC 523
Q ++A+ R +I I+ +A + L C
Sbjct: 381 QHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 223/414 (53%), Gaps = 36/414 (8%)
Query: 204 GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA 263
G ++ + L+S + +C + + G H L LK F+S
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG-----FISD--------------- 154
Query: 264 ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE 323
VY G SSL+ Y G + A ++F+ + ERN V WTA+ SG+ + + +
Sbjct: 155 --VYLG---------SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVD 203
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
KL+ + R + + P+ +L AC L G+ H L L ++++L
Sbjct: 204 ICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLK 442
+ MY KCG++ A + F S++DV+ +N MIAGYA HG +AI+LF+ M+ K K
Sbjct: 263 ISMYCKCGDLKDAFRIFDQF--SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 443 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 502
PDAIT++ +LS+CRH GLV+ G KFF M E + + PE+ HY+C+VD+ GR L++A+E
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 503 FMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGK 562
+ +P++ ++ IWG+ L +C+++ + +A EE L +E D + +VQLAN+YA+ G
Sbjct: 380 LIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGY 439
Query: 563 WNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
W E +RK M+ K PGCSWI + N + +F + D S+ + I L CL
Sbjct: 440 WKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 69/312 (22%)
Query: 154 RD-GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTL 212
RD G+++ A VF + PE N VSW +I+G+ Q ++ L L+ +M + + N +T
Sbjct: 166 RDSGEVENAYKVFEEMPERN-VVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 213 ASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 272
++LSACTG L G+ VH L S +S+ ++ YCKCG+++ A ++
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
K + +S+IAGY+ G +A LF+ + ++
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS--------------------------- 317
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
PD + + VL +C + G++ + L + S LVD+ +
Sbjct: 318 ----GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR--- 370
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
G +A++L + M +KP+++ + +LL
Sbjct: 371 ------------------------------FGLLQEALELIENM---PMKPNSVIWGSLL 397
Query: 453 SACRHRGLVELG 464
+CR G V G
Sbjct: 398 FSCRVHGDVWTG 409
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 198/361 (54%), Gaps = 3/361 (0%)
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
Y + GNM A S++ + + + ++++ GY++ G+M +R+FD + ERN W L
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 159
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
GY ++ + V F+ +++P+ + VL ACA GK H Y
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 374 N-MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
N +D + +AL+DMY KCG I A + F+ + RD+I +N MI G A HG +A+ L
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F EM + PD +TFV +L AC+H GLVE G +F SM D++++PEI H C+VD+
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLS 337
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
R L +AVEF+ K+P++ DA IW L A K+ + + A EEL+K+E N + +V
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVM 397
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 612
L+N+Y G++++ R++ MR K G SWI ++G+ F S H + + +
Sbjct: 398 LSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRI 457
Query: 613 L 613
L
Sbjct: 458 L 458
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 104/258 (40%), Gaps = 65/258 (25%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAG---ADGCDTVAL 58
P R+ WN +I YI+ N+ +AR+LFD RD++S+N++L YA + C+ V
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 59 DL---------------------------FARMQSARDTIGMDEITLTTMLNLSAKLRVV 91
D+ F RM + D T+T +L+ AKL
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDA-TMTLVLSACAKLGAF 204
Query: 92 CYGKQMHSYMVKTA-NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 150
+GK +H Y N + ++LIDMY KCG+ A VF G DL+S N M
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTM-- 261
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
I G +G+ AL LF EM GI ++
Sbjct: 262 ------------------------------INGLAAHGHGTEALNLFHEMKNSGISPDKV 291
Query: 211 TLASVLSACTGLKCLKLG 228
T VL AC + ++ G
Sbjct: 292 TFVGVLCACKHMGLVEDG 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 114 SSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND 173
+++I Y + G+ EA ++F D++S N ++ G M+ VF PE N
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMP-CRDVMSWNTVLEGYANIGDMEACERVFDDMPERN- 151
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVH 232
SWN LI GY QNG + L F M+++G + N T+ VLSAC L GK VH
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 233 AL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
L + V + ++D Y KCG + A V+ GI + + +++I G ++ G+
Sbjct: 212 KYGETLGYNKVDVN-VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 291 MTKAKRLFDSL 301
T+A LF +
Sbjct: 271 GTEALNLFHEM 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 27/250 (10%)
Query: 289 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
G + A ++F + E+N V+WT++ +GY+ ++ + + F L P+ I V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-------LSPERDI---V 91
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSD 407
L I + +G A L ++ + ++ + +++ Y+ G++ E+ F + +
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM--PE 149
Query: 408 RDVILYNVMIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGE- 465
R+V +N +I GYA +G ++ + F+ M+ + S+ P+ T +LSAC G + G+
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 466 --KFFMSM---KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
K+ ++ K D NV ++DMYG+ +E A+E + I + D W +
Sbjct: 210 VHKYGETLGYNKVDVNV------KNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMI 262
Query: 521 NACKINNNTT 530
N + + T
Sbjct: 263 NGLAAHGHGT 272
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/584 (29%), Positives = 274/584 (46%), Gaps = 71/584 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
R+ + + Y +L AR LFD R + +NS++ AYA A TV L LF+
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTV-LSLFS- 95
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
Q R D T + ++ + +H + + + S+++ YSK
Sbjct: 96 -QILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKA 154
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G EA +F C D+AL WN +I G
Sbjct: 155 GLIVEASKLF-------------------CSIPDPDLAL--------------WNVMILG 181
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Y G+ ++ + LF M +G + N +T+ ++ S L + VHA LK + S+
Sbjct: 182 YGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+V +V+ Y +C + A SV F+S+SE
Sbjct: 242 SYVGCALVNMYSRCMCIASACSV-------------------------------FNSISE 270
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+ V ++L +GY + + LF E R + PD +++ VLG+CA + GK+
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H+Y++R L +D K+ SAL+DMYSKCG + A F + + ++++ +N +I G H
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE--KNIVSFNSLILGLGLH 387
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
GF + A + F E+L++ L PD ITF ALL C H GL+ G++ F MK ++ + P+ H
Sbjct: 388 GFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEH 447
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
Y MV + G +LE+A EF+ + ID+ I GA L+ C+++ NT L + E + K
Sbjct: 448 YVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNG 507
Query: 544 ADNGSRY-VQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
+ S Y V L+NVYA G+W+E+ R+R + KLPG SW
Sbjct: 508 EERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/636 (25%), Positives = 299/636 (47%), Gaps = 84/636 (13%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQ-ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFA 62
+N F NA++ Y K + +F+S S + VSY +++ A + A+ +F
Sbjct: 171 KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKV-LEAVQMFR 229
Query: 63 RMQSARDTIGMDEITLTTMLNLSAKLRVVC----------YGKQMHSYMVKTANDLSKFA 112
M + +D + L+ +L++SA R C GKQ+H ++
Sbjct: 230 LM--CEKGVQVDSVCLSNILSISAP-REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHL 286
Query: 113 LSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMV----------------------- 149
+SL+++Y+K A +F+ V ++VS N M+
Sbjct: 287 NNSLLEIYAKNKDMNGAELIFAEMPEV-NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG 345
Query: 150 ------------AACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
AC R G ++ +F P+ +WN +++GY + E A++ F
Sbjct: 346 FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-PSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
+M + ++ ++ TL+ +LS+C L+ L+ GK +H +V++ + N + SG++ Y +C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
M +E ++ D ++E + W ++ SG+
Sbjct: 465 EKMEISECIFD------------------------------DCINELDIACWNSMISGFR 494
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE 377
+ LFR T L P+ VL +C+ +L G+Q H ++++ D
Sbjct: 495 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS 554
Query: 378 KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ +AL DMY KCG I A + F V ++ +++N MI GY H+G ++A+ L+++M+
Sbjct: 555 FVETALTDMYCKCGEIDSARQFFDAVLR--KNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
KPD ITFV++L+AC H GLVE G + SM+ + + PE+ HY C+VD GR +L
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 498 EKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVY 557
E A + P + + +W L++C+++ + +L ++ E+L++++ + + YV L+N Y
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 558 AAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
++ +W++ ++ M K PG SW N +
Sbjct: 733 SSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 258/568 (45%), Gaps = 86/568 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ +SWNA + K +L +A +FD RD+VS+N+M+S G + AL +
Sbjct: 67 MSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLV-RKGFEEKALVV 125
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ RM D TL ++L+ +K+ +G + H VKT D + F ++L+ MY
Sbjct: 126 YKRMVC--DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMY 183
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG +D + VF + N+ VS+ +
Sbjct: 184 AKCGFI-------------------------------VDYGVRVFESLSQPNE-VSYTAV 211
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS------ACTGLKCL---KLGKCV 231
I G + + A+ +F M EKG++ + L+++LS C L + +LGK +
Sbjct: 212 IGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 271
Query: 232 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSK--- 288
H L L+ + +++ +++ Y K +M AE ++A + + + + +I G+ +
Sbjct: 272 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 331
Query: 289 --------------------------------GNMTKAKRLFDSLSERNYVVWTALCSGY 316
G++ +R+F S+ + + W A+ SGY
Sbjct: 332 DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY 391
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
+ E FR+ + + L PD + +L +CA L GKQ H ++RT+++ +
Sbjct: 392 SNYEHYEEAISNFRQMQ-FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKN 450
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
+ S L+ +YS+C + +E F + + D+ +N MI+G+ H+ + KA+ LF+ M
Sbjct: 451 SHIVSGLIAVYSECEKMEISECIFDDCIN-ELDIACWNSMISGFRHNMLDTKALILFRRM 509
Query: 437 LKIS-LKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRG 494
+ + L P+ +F +LS+C + G +F + +K Y + + + + DMY +
Sbjct: 510 HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY--VSDSFVETALTDMYCKC 567
Query: 495 NQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+++ A +F + ++ + IW ++
Sbjct: 568 GEIDSARQFFDAV-LRKNTVIWNEMIHG 594
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 221/494 (44%), Gaps = 53/494 (10%)
Query: 78 LTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCD 137
L ++L R GK +H ++V+ + + L+D+Y +CG A VF
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 138 GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
V D+ S NA + C+ G + A VF PE D VSWN +I+ V+ G+ E+AL ++
Sbjct: 69 -VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPE-RDVVSWNNMISVLVRKGFEEKALVVY 126
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
M+ G ++ TLASVLSAC+ + G H + +K N FV + ++ Y KC
Sbjct: 127 KRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
G I Y R+F+SLS+ N V +TA+ G
Sbjct: 187 G----------------------FIVDY--------GVRVFESLSQPNEVSYTAVIGGLA 216
Query: 318 KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA---TLS------LGKQTHAYI 368
+ + ++FR + + D++ + N+L A + +LS LGKQ H
Sbjct: 217 RENKVLEAVQMFR-LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 275
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
LR D L ++L+++Y+K ++ AE F + + +V+ +N+MI G+ +K
Sbjct: 276 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV--NVVSWNIMIVGFGQEYRSDK 333
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
+++ M +P+ +T +++L AC G VE G + F S+ + P + + M+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAML 388
Query: 489 DMYGRGNQLEKAVEFMRKIPIQ---IDASIWGAFLNACKINNNTTLVKQAEEELLKVEAD 545
Y E+A+ R++ Q D + L++C KQ +++ E
Sbjct: 389 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEIS 448
Query: 546 NGSRYVQ-LANVYA 558
S V L VY+
Sbjct: 449 KNSHIVSGLIAVYS 462
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 246/469 (52%), Gaps = 37/469 (7%)
Query: 148 MVAACCRDG---KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 204
++A C G M+ A ++F + + T +NT+I GYV E AL + EM+++G
Sbjct: 69 VLAKCAHSGWENSMNYAASIF-RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG 127
Query: 205 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
E + T +L ACT LK ++ GK +H V K ++ FV + +++ Y +CG M +
Sbjct: 128 NEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
+V+ + K+ + SS+++ + G +W+ +C
Sbjct: 188 AVFEKLESKTAASWSSMVSARAGMG------------------MWS----------EC-- 217
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
LFR + L + +V+ L ACA L+LG H ++LR ++ + ++LV
Sbjct: 218 -LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
DMY KCG + A FQ + R+ + Y+ MI+G A HG A+++F +M+K L+PD
Sbjct: 277 DMYVKCGCLDKALHIFQKM--EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 445 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 504
+ +V++L+AC H GLV+ G + F M ++ V P HY C+VD+ GR LE+A+E +
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 505 RKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 564
+ IPI+ + IW FL+ C++ N L + A +ELLK+ + N Y+ ++N+Y+ W+
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD 454
Query: 565 EMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
++ R R E+ K + PG S + ++ H F S D SH K IY L
Sbjct: 455 DVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKML 503
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 156/403 (38%), Gaps = 71/403 (17%)
Query: 40 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 99
+N+M+ Y + MQ + D T +L +L+ + GKQ+H
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEP---DNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 100 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMD 159
+ K + F +SLI+MY +CG + VF L SK A
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFE------KLESKTA------------ 198
Query: 160 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSA 218
SW+++++ G L LF M E ++ + + S L A
Sbjct: 199 ---------------ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLA 243
Query: 219 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 278
C L LG +H +L+N N V + +VD Y KC
Sbjct: 244 CANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC--------------------- 282
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
G + KA +F + +RN + ++A+ SG + E+ ++F + E L
Sbjct: 283 ----------GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM-IKEGL 331
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAE 397
PD ++ V+VL AC+ + G++ A +L+ K+ + LVD+ + G + A
Sbjct: 332 EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
++ Q + DVI + E I QE+LK+S
Sbjct: 392 ETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAA-QELLKLS 433
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F N++I Y + + + A+F+ + S++SM+SA AG G + L LF M
Sbjct: 166 DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM-GMWSECLLLFRGM 224
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
S + + +E + + L A + G +H ++++ ++L+ +SL+DMY KCG
Sbjct: 225 CSETN-LKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+D AL++F K + N+ ++++ +I+G
Sbjct: 284 C--------------------------------LDKALHIFQKMEKRNN-LTYSAMISGL 310
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+G E AL +F +MI++G+E + SVL+AC+ +K G+ V A +LK
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 245 FVSSG-IVDFYCKCGNMRYAESVYAGIGIK 273
G +VD + G + A I I+
Sbjct: 371 AEHYGCLVDLLGRAGLLEEALETIQSIPIE 400
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 228/426 (53%), Gaps = 7/426 (1%)
Query: 193 ALTLFIEMIEKGIEYNQHTLAS-VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
A + F M+ + + H + VL + L VH + K+ V + ++
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 252 DFYCK-CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWT 310
Y ++ A ++ + ++ + +++++GY+ G+++ A LF+ + ER+ W
Sbjct: 169 HSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWN 228
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
A+ + ++ LFR ++ P+ + +V VL ACA TL L K HA+ R
Sbjct: 229 AILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR 288
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
L+ D ++++LVD+Y KCGN+ A F++ S + + +N MI +A HG +AI
Sbjct: 289 RDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAI 346
Query: 431 QLFQEMLKISL---KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+F+EM+K+++ KPD ITF+ LL+AC H GLV G +F M + + P I HY C+
Sbjct: 347 AVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNG 547
+D+ GR + ++A+E M + ++ D +IWG+ LNACKI+ + L + A + L+ + +NG
Sbjct: 407 IDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
Query: 548 SRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKAD 607
+AN+Y G W E R RK ++ + A K PG S I ++N +H F S D SH + +
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Query: 608 AIYSTL 613
IY L
Sbjct: 527 EIYMIL 532
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTT 80
NL+ AR +FD S + Y ++L+AY+ + + F R+ R +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF----REAYNVFSGC 136
+L + L +H+++ K+ L ++L+ Y+ S R+ ++ S
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE- 190
Query: 137 DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTL 196
++VS AM++ R G + A+ +F PE D SWN ++A QNG A++L
Sbjct: 191 ---RNVVSWTAMLSGYARSGDISNAVALFEDMPE-RDVPSWNAILAACTQNGLFLEAVSL 246
Query: 197 FIEMI-EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
F MI E I N+ T+ VLSAC L+L K +HA + D S+ FVS+ +VD Y
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
KCGN+ A SV+ KS A +S+I ++ G +A +F+ + + N
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLN 356
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 43/280 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M RN SW A++ Y ++ +++ A ALF+ RD+ S+N++L+A +G A+ L
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA-CTQNGLFLEAVSL 246
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK--FALSSLID 118
F RM + +I +E+T+ +L+ A+ + K +H++ + DLS F +SL+D
Sbjct: 247 FRRMIN-EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR--RDLSSDVFVSNSLVD 303
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
+Y KCG+ EA +VF + SK ++ A WN
Sbjct: 304 LYGKCGNLEEASSVF-------KMASKKSLTA--------------------------WN 330
Query: 179 TLIAGYVQNGYMERALTLFIEMIE---KGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++I + +G E A+ +F EM++ I+ + T +L+ACT + G+ L+
Sbjct: 331 SMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLM 390
Query: 236 LKNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKS 274
G + G ++D + G A V + + +K+
Sbjct: 391 TNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 295/615 (47%), Gaps = 77/615 (12%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+N N +I Y K N+ AR +FD+ R++VS+ ++++ Y A G + LF+
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQA-GNEQEGFCLFSS 152
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M S +E TL+++L S + GKQ+H +K S + +++I MY +C
Sbjct: 153 MLS---HCFPNEFTLSSVLT-SCRYEP---GKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
AY ++ + + +F + V+WN++IA
Sbjct: 206 HDGAAAYEAWTVFEAI------------------------------KFKNLVTWNSMIAA 235
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
+ ++A+ +F+ M G+ +++ TL ++ CS+
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI-------------------------CSS 270
Query: 244 QFVSSGIV-DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSK-GNMTKAKRLFDSL 301
+ SS +V + KC ++ +V +G+ ++ AT+ LI YS + T +LF +
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA-LIKVYSEMLEDYTDCYKLFMEM 329
Query: 302 SE-RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
S R+ V W + + + E LF + R E L PD +VL ACA T
Sbjct: 330 SHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ-EKLSPDWYTFSSVLKACAGLVTARH 387
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAG 419
HA +++ D L ++L+ Y+KCG++ + F D D RDV+ +N M+
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD---DMDSRDVVSWNSMLKA 444
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
Y+ HG + + +FQ+M + PD+ TF+ALLSAC H G VE G + F SM E LP
Sbjct: 445 YSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEEL 539
++ HYAC++DM R + +A E ++++P+ DA +W A L +C+ + NT L K A ++L
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 540 LK-VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTS 598
+ VE N Y+Q++N+Y AEG +NE KEM K P SW + N +H F S
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS 621
Query: 599 GDTSHSKADAIYSTL 613
G +A+Y L
Sbjct: 622 GGRHRPDKEAVYREL 636
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 44/274 (16%)
Query: 185 VQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
V++G + RA++LF +E +Q A++ AC + L G +H +L + C +
Sbjct: 37 VRSGDIRRAVSLFYS---APVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 244 Q--FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
Q +++ +++ Y KCGN+ YA +++FD++
Sbjct: 94 QNVILANFLINMYAKCGNILYA-------------------------------RQVFDTM 122
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
ERN V WTAL +GYV++ + F LF + P+ + +VL +C + G
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCRYEP----G 176
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGY 420
KQ H L+ L+ +A+A++ MY +C + A A +++ + ++++ +N MIA +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
KAI +F M + D T + + S+
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 233/430 (54%), Gaps = 41/430 (9%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSAC 219
+L+VFW P + + SWN +I + ++G+ +++ LF+ M E + + TL +L AC
Sbjct: 86 SLSVFWHMP-YRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 220 TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS 279
+ + K G +H L LK S+ FVSS +V Y
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV------------------------ 180
Query: 280 SLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKL--FREFRTTEA 337
G + A++LFD + R+ V++TA+ GYV QQ EA+ L FRE +
Sbjct: 181 -------DMGKLLHARKLFDDMPVRDSVLYTAMFGGYV--QQGEAMLGLAMFREMGYS-G 230
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
D++++V++L AC L GK H + +R + L +A+ DMY KC + YA
Sbjct: 231 FALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAH 290
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
F V S RDVI ++ +I GY G + +LF EMLK ++P+A+TF+ +LSAC H
Sbjct: 291 TVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
Query: 458 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWG 517
GLVE +F M+E YN++PE+ HYA + D R LE+A +F+ +P++ D ++ G
Sbjct: 349 GGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMG 407
Query: 518 AFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE 577
A L+ CK+ N + ++ EL++++ S YV LA +Y+A G+++E +R+ M+ K+
Sbjct: 408 AVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQ 467
Query: 578 ATKLPGCSWI 587
+K+PGCS I
Sbjct: 468 ISKVPGCSSI 477
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
F +A+++ Y+ L AR LFD RD V Y +M Y G + L +F M
Sbjct: 170 FVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV-QQGEAMLGLAMFREM-- 226
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+D + + ++L +L + +GK +H + ++ + L +++ DMY KC
Sbjct: 227 GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSIL 286
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
A+ VF N D +SW++LI GY
Sbjct: 287 DYAHTVFV---------------------------------NMSRRDVISWSSLILGYGL 313
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 219
+G + + LF EM+++GIE N T VLSAC
Sbjct: 314 DGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC 346
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/644 (27%), Positives = 291/644 (45%), Gaps = 96/644 (14%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
P + N+II Y K + A +F+ RD++S N++L+ +A A+G A +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA-ANGMFEEAFGIL 380
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKF-ALSSLIDMY 120
+MQS D I D T+ ++ ++ L G+ +H Y V+ ++S+IDMY
Sbjct: 381 NQMQSV-DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALN----------------- 163
KCG +A +F DLVS N+M++A ++G A N
Sbjct: 440 GKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 164 ---------------VFWKN---------------------PEFNDTVSWNTLIAGYVQN 187
+F K+ E D SWN++I+G +
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 188 GYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
G+ +L F M +G I ++ TL +SA L + G+C H L +K+ + +
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
+ ++ Y +C ++ A ++F +S+ N
Sbjct: 619 QNTLITMYGRCKDIE-------------------------------SAVKVFGLISDPNL 647
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
W + S +++ VF+LFR + L P+ + V +L A + S G Q H
Sbjct: 648 CSWNCVISALSQNKAGREVFQLFRNLK----LEPNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+++R + +++ALVDMYS CG + K F+ + +N +I+ + HG
Sbjct: 704 HLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR--NSGVNSISAWNSVISAHGFHGMG 761
Query: 427 NKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 485
KA++LF+E+ S ++P+ +F++LLSAC H G ++ G ++ M+E + V P H
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV 821
Query: 486 CMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEAD 545
+VDM GR +L +A EF+ I A +WGA L+AC + +T L K+ E L ++E D
Sbjct: 822 WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 546 NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 589
N S Y+ LAN Y G W E R+RK + KLPG S I V
Sbjct: 882 NASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/573 (22%), Positives = 238/573 (41%), Gaps = 105/573 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA++ Y K NL+ A +F HRD+VS+N++++ A+G +L F M +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL-ANGHPRKSLQYFKSMTGSGQ 285
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFR 127
D +T + +++ + + + G+ +H ++K+ + + +S+I MYSKCG
Sbjct: 286 E--ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A VF +LV CR D +S N ++ G+ N
Sbjct: 344 AAETVFE------ELV---------CR------------------DVISSNAILNGFAAN 370
Query: 188 GYMERALTLFIEM--IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
G E A + +M ++K I+ + T+ S+ S C L + G+ VH ++ + S
Sbjct: 371 GMFEEAFGILNQMQSVDK-IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRAL 429
Query: 246 -VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF------ 298
V + ++D Y KCG AE ++ + + +S+I+ +S G KAK LF
Sbjct: 430 EVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Query: 299 -----------------------------------------------DSLSE-RNYVVWT 310
+++SE R+ W
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWN 549
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
++ SG S + F+ + D + ++ + A + G+ H ++
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
+ +D +L + L+ MY +C +I A K F L+ SD ++ +N +I+ + + +
Sbjct: 610 SLRELDTQLQNTLITMYGRCKDIESAVKVFGLI--SDPNLCSWNCVISALSQNKAGREVF 667
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMVD 489
QLF+ + L+P+ ITFV LLSA G G + + + + P + A +VD
Sbjct: 668 QLFR---NLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP--FVSAALVD 722
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
MY LE ++ R + S W + ++A
Sbjct: 723 MYSSCGMLETGMKVFRNSGVN-SISAWNSVISA 754
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 200/451 (44%), Gaps = 78/451 (17%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ Y + L + LFD +D++ +NSM++A +G A+ LF M +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL-NQNGRYIAAVGLFIEMIHKGNEF 186
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
+ L S L C +H ++T ++L+++Y+K + A
Sbjct: 187 DSTTLLLAASALSSLHLSRKC--SMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
VF+ + E D VSWNT++ + NG+
Sbjct: 245 VFT---------------------------------HMEHRDIVSWNTIMTKCLANGHPR 271
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV 251
++L F M G E + T + V+SAC+ ++ L LG+ +H LV+K+
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSG------------ 319
Query: 252 DFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTA 311
Y+ + +G +S+I+ YS G+ A+ +F+ L R+ + A
Sbjct: 320 ----------YSPEAHVSVG-------NSIISMYSKCGDTEAAETVFEELVCRDVISSNA 362
Query: 312 LCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
+ +G+ + E F + + ++ + + PD +V++ C + G+ H Y +R
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 372 KLNMDE-KLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
++ ++ ++++DMY KCG AE F+ T + RD++ +N MI+ ++ +GF +KA
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFK--TTTHRDLVSWNSMISAFSQNGFTHKAK 480
Query: 431 QLFQEML------KISLKPDAITFVALLSAC 455
LF+E++ K SL T +A+L++C
Sbjct: 481 NLFKEVVSEYSCSKFSLS----TVLAILTSC 507
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 175/413 (42%), Gaps = 49/413 (11%)
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALT 195
C + DL + + ++ R G++ + +F + E D + WN++I QNG A+
Sbjct: 116 CGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE-KDVIVWNSMITALNQNGRYIAAVG 174
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYC 255
LFIEMI KG E++ TL SA + L + +H L ++ + + + +++ Y
Sbjct: 175 LFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYA 234
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
K N+ AE V F + R+ V W + +
Sbjct: 235 KGENLSSAECV-------------------------------FTHMEHRDIVSWNTIMTK 263
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
+ + + F+ T DT+ V+ AC+ L+LG+ H ++++ +
Sbjct: 264 CLANGHPRKSLQYFKSM-TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 376 DEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 433
+ ++ ++++ MYSKCG+ AE F+ + RDVI N ++ G+A +G +A +
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELV--CRDVISSNAILNGFAANGMFEEAFGIL 380
Query: 434 QEMLKI-SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA-----CM 487
+M + ++PD T V++ S C G Y V E+ A +
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV-----HGYTVRMEMQSRALEVINSV 435
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
+DMYG+ L E + K D W + ++A N T K +E++
Sbjct: 436 IDMYGKCG-LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 38/427 (8%)
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
+ M+ + + +T SV+ +C L L++GK VH + + + +V + +V FY K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 257 CGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGY 316
C G+M A+++FD + E++ V W +L SG+
Sbjct: 155 C-------------------------------GDMEGARQVFDRMPEKSIVAWNSLVSGF 183
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
++ + ++F + R + PD+ V++L ACA +SLG H YI+ L+++
Sbjct: 184 EQNGLADEAIQVFYQMRES-GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM 436
KL +AL+++YS+CG++ A + F + +++ V + MI+ Y HG+ +A++LF +M
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETN--VAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 437 LK-ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGN 495
P+ +TFVA+LSAC H GLVE G + M + Y ++P + H+ CMVDM GR
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 496 QLEKAVEFMRKIPIQIDAS---IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
L++A +F+ ++ A+ +W A L ACK++ N L + + L+ +E DN +V
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYST 612
L+N+YA GK +E+ IR M K G S I VEN ++F+ GD SH + IY
Sbjct: 421 LSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRY 480
Query: 613 LVCLYGK 619
L L +
Sbjct: 481 LETLISR 487
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 71/396 (17%)
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ RM S+ + T T+++ A L + GK +H + V + L + ++L+ Y
Sbjct: 95 YRRMLSS--NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFY 152
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCG M+ A VF + PE V+WN+L
Sbjct: 153 SKCGD--------------------------------MEGARQVFDRMPE-KSIVAWNSL 179
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
++G+ QNG + A+ +F +M E G E + T S+LSAC + LG VH
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH-------- 231
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
Q++ S +D K G ++LI YS G++ KA+ +FD
Sbjct: 232 ---QYIISEGLDLNVKLG--------------------TALINLYSRCGDVGKAREVFDK 268
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ E N WTA+ S Y + +LF + IP+ + V VL ACA +
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 361 GKQTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV--ILYNVMI 417
G+ + + ++ +L + +VDM + G + A K + + + L+ M+
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
H + +++ + + I+L+PD +LS
Sbjct: 389 GACKMHRNYDLGVEIAKRL--IALEPDNPGHHVMLS 422
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 11 AIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT 70
A++ Y K ++ AR +FD + +V++NS++S + +G A+ +F +M+ +
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFE-QNGLADEAIQVFYQMRES--G 203
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
D T ++L+ A+ V G +H Y++ DL+ ++LI++YS+CG +A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYM 190
VF K E N +W +I+ Y +GY
Sbjct: 264 EVFD--------------------------------KMKETN-VAAWTAMISAYGTHGYG 290
Query: 191 ERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
++A+ LF +M + G N T +VLSAC ++ G+ V+ + K+
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 240/459 (52%), Gaps = 9/459 (1%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
A VF + PE D +S +I +V+ A F ++ GI N+ T +V+ + T
Sbjct: 46 AHKVFDEIPEL-DVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 221 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS 280
+ +KLGK +H LK SN FV S +++ Y K + A + + + ++
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 281 LIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
LI+GY K +A LF ++ ER+ V W A+ G+ ++ + E F + +IP
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHA---YILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+ + A + A+ GK HA L + N+ + ++L+ YSKCGN+ +
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV--FVWNSLISFYSKCGNMEDSL 282
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK-ISLKPDAITFVALLSACR 456
+F + + R+++ +N MI GYAH+G +A+ +F++M+K +L+P+ +T + +L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 457 HRGLVELGEKFFMSMKEDYN--VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAS 514
H GL++ G +F DY+ L E+ HYACMVDM R + ++A E ++ +P+
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 515 IWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
W A L C+I++N L K A ++L+++ + S YV L+N Y+A W + IR++M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 575 GKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
+ GCSWI V + I VF + D ++ D +Y L
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 192/453 (42%), Gaps = 56/453 (12%)
Query: 13 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 72
++ +I + + A +FD D++S +++ + + A F R+ I
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFV-KESRHVEASQAFKRLLCL--GIR 90
Query: 73 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 132
+E T T++ S R V GKQ+H Y +K + F S++++ Y K + +A
Sbjct: 91 PNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRC 150
Query: 133 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 192
F ++VS +++ + + + AL++F PE V+WN +I G+ Q G E
Sbjct: 151 FDDTRD-PNVVSITNLISGYLKKHEFEEALSLFRAMPE-RSVVTWNAVIGGFSQTGRNEE 208
Query: 193 ALTLFIEMIEKGIEY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-NQFVSSGI 250
A+ F++M+ +G+ N+ T ++A + + GK +HA +K G N FV + +
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSL 268
Query: 251 VDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE--RNYVV 308
+ FY KCGNM SL+A F+ L E RN V
Sbjct: 269 ISFYSKCGNME-----------------DSLLA--------------FNKLEEEQRNIVS 297
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG-----KQ 363
W ++ GY + + E +F + L P+ + I+ VL AC + G K
Sbjct: 298 WNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKA 357
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAE---KSFQLVTDSDRDVILYNVMIAGY 420
+ Y L ++ + +VDM S+ G AE KS L D + + ++ G
Sbjct: 358 VNDYDDPNLLELEH--YACMVDMLSRSGRFKEAEELIKSMPL----DPGIGFWKALLGGC 411
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
H NK + + L P ++ +LS
Sbjct: 412 QIHS--NKRLAKLAASKILELDPRDVSSYVMLS 442
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N S +I Y+K H +A +LF + R +V++N+++ ++ G + A++ F M
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQT-GRNEEAVNTFVDM 216
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVK-TANDLSKFALSSLIDMYSKC 123
I +E T + + + GK +H+ +K + F +SLI YSKC
Sbjct: 217 LREGVVIP-NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G+ ++ F+ + E + VSWN++I G
Sbjct: 276 GNMEDSLLAFNKLE-------------------------------EEQRNIVSWNSMIWG 304
Query: 184 YVQNGYMERALTLFIEMI-EKGIEYNQHTLASVLSACTGLKCLKLG 228
Y NG E A+ +F +M+ + + N T+ VL AC ++ G
Sbjct: 305 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEG 350
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 39/486 (8%)
Query: 159 DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
D +L++F +N E + N LI G +N E ++ FI M+ G++ ++ T VL +
Sbjct: 77 DYSLSIF-RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS 135
Query: 219 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA--------------- 263
+ L LG+ +HA LKN + FV +VD Y K G +++A
Sbjct: 136 NSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 264 --------------------ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+++ + ++ + S+LI GY G + +AK+LF+ + E
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+N V WT L +G+ ++ E + E + L P+ I VL AC+ L G +
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H YIL + +D + +ALVDMY+KCG + A F + + +D++ + MI G+A H
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM--NHKDILSWTAMIQGWAVH 372
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G ++AIQ F++M+ KPD + F+A+L+AC + V+LG FF SM+ DY + P + H
Sbjct: 373 GRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKH 432
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVE 543
Y +VD+ GR +L +A E + +PI D + W A ACK + + + LL+++
Sbjct: 433 YVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELD 492
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
+ Y+ L +A++G ++ + R ++ + + G S+I ++ ++ F++GD SH
Sbjct: 493 PELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSH 552
Query: 604 SKADAI 609
I
Sbjct: 553 KLTQEI 558
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 40/323 (12%)
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R + D +T +L ++KL G+ +H+ +K D F SL+DMY+K G +
Sbjct: 119 RLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLK 178
Query: 128 EAYNVFSGCDGVV---DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------------ 172
A+ VF + ++ N ++ CR M MA +F PE N
Sbjct: 179 HAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV 238
Query: 173 ------------------DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 214
+ VSW TLI G+ Q G E A++ + EM+EKG++ N++T+A+
Sbjct: 239 DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAA 298
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
VLSAC+ L G +H +L N ++ + + +VD Y KCG + A +V++ + K
Sbjct: 299 VLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD 358
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSL----SERNYVVWTALCSGYVKSQQCEAVFKLFR 330
+ +++I G++ G +A + F + + + VV+ A+ + + S + + F
Sbjct: 359 ILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFD 418
Query: 331 EFRTTEALIPDT---MIIVNVLG 350
R A+ P +++V++LG
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLG 441
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN+ SW+ +I Y+ + L +A+ LF+ +++VS+ ++++ ++ +T
Sbjct: 222 MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F ++ + +E T+ +L+ +K + G ++H Y++ L + ++L+DMY
Sbjct: 282 FEMLEKG---LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCG A VFS N D +SW +
Sbjct: 339 AKCGELDCAATVFS---------------------------------NMNHKDILSWTAM 365
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
I G+ +G +A+ F +M+ G + ++ +VL+AC + LG
Sbjct: 366 IQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 340 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 399
PD ++++ AC A+L + HA ILR + + ++A+ LV S + Y+
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 400 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
F+ +R+ + N +I G + +++ F ML++ +KPD +TF +L + G
Sbjct: 83 FR--NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 460 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAS---IW 516
LG + +++ V + + +VDMY + QL+ A + + P +I IW
Sbjct: 141 FRWLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 517 GAFLNA-CKINN---NTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 572
+N C+ + TTL + E N + L Y G+ N ++ +
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPER-------NSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 573 MRGKEATKLPGCSWIYVENG 592
M K SW + NG
Sbjct: 253 MPEKNVV-----SWTTLING 267
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 284/588 (48%), Gaps = 49/588 (8%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F+ A++ Y+K +T A + D R + S N+ +S C D F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCR----DAFRMF 120
Query: 65 QSAR-DTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
AR GM+ +T+ ++L + G Q+H +K+ ++ + +SL+ MYS+C
Sbjct: 121 GDARVSGSGMNSVTVASVLGGCGDIE---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC 177
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G + +A +F K P V++N I+G
Sbjct: 178 GEWV--------------------------------LAARMFEKVPH-KSVVTYNAFISG 204
Query: 184 YVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
++NG M ++F M + E N T + ++AC L L+ G+ +H LV+K +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGI-GIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
V + ++D Y KC + A V+ + ++ + +S+I+G G A LF+ L
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 302 S----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
+ + W +L SG+ + + FK F + ++P + ++L AC+ T
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV-VMVPSLKCLTSLLSACSDIWT 383
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMI 417
L GK+ H ++++ D + ++L+DMY KCG ++A + F +D + +NVMI
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMI 443
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
+GY HG AI++F+ + + ++P TF A+LSAC H G VE G + F M+E+Y
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEE 537
P H CM+D+ GR +L +A E + ++ + + L +C+ + + L ++A
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 538 ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 585
+L ++E +N + +V L+++YAA +W ++ IR+ + K+ KLPG S
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 175/401 (43%), Gaps = 74/401 (18%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
++ T +L AKL V G+ +H+ +VKT + F ++L+ MY K +A
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA---- 85
Query: 134 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 193
L V + PE S N ++G ++NG+ A
Sbjct: 86 ----------------------------LKVLDEMPE-RGIASVNAAVSGLLENGFCRDA 116
Query: 194 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
+F + G N T+ASVL C ++ G +H L +K+
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSG-------------- 159
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
+ VY G +SL++ YS G A R+F+ + ++ V + A
Sbjct: 160 --------FEMEVYVG---------TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 314 SGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
SG +++ +VF L R+F + E P+ + VN + ACA L G+Q H +++
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEE---PNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAI 430
+ + + +AL+DMYSKC A F + D+ R++I +N +I+G +G A+
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT-RNLISWNSVISGMMINGQHETAV 318
Query: 431 QLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
+LF+++ LKPD+ T+ +L+S G V KFF M
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 340 PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 399
P+ +L +CA + G+ HA +++T +D A+ALV MY K + A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 400 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
+ +R + N ++G +GF A ++F + +++T ++L C G
Sbjct: 89 LDEM--PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 460 LVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGA 518
+E G + ++MK + + E+Y +V MY R + A K+P + + A
Sbjct: 144 DIEGGMQLHCLAMKSGFEM--EVYVGTSLVSMYSRCGEWVLAARMFEKVPHK-SVVTYNA 200
Query: 519 FLNACKINNNTTLVK 533
F++ N LV
Sbjct: 201 FISGLMENGVMNLVP 215
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 263/547 (48%), Gaps = 77/547 (14%)
Query: 81 MLNLSAKLRVVCYGKQMHSYMVKTA-NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
++ + + R+ C G+ +H+++V + L++ A + L+ Y +CG +A VF
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIA-AKLVTFYVECGKVLDARKVFDEMPKR 80
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
D+ M+ AC R NGY + +L F E
Sbjct: 81 -DISGCVVMIGACAR--------------------------------NGYYQESLDFFRE 107
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M + G++ + + S+L A L + GK +H LVLK S+ F+ S ++D Y K G
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 260 MRYAESVYAGIG----------------------------------IKSPFAT-SSLIAG 284
+ A V++ +G IK T ++LI+G
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
Query: 285 YSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
+S N K + + + Y V WT++ SG V + Q E F F++ T L P
Sbjct: 228 FSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM-LTHGLYP 286
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
++ I+ +L AC A + GK+ H Y + T L + SAL+DMY KCG I+ A F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 401 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
+ + + +N MI YA+HG +KA++LF +M K D +TF A+L+AC H GL
Sbjct: 347 R--KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
Query: 461 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+LG+ F+ M+ Y ++P + HYACMVD+ GR +L +A E ++ + ++ D +WGA L
Sbjct: 405 TDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Query: 521 NACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 580
AC+ + N L + A + L ++E +N + L ++YA G W + R++K ++ K +
Sbjct: 465 AACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRR 524
Query: 581 LPGCSWI 587
G SW+
Sbjct: 525 FLGSSWV 531
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 203/492 (41%), Gaps = 113/492 (22%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ Y++ + AR +FD RD+ M+ A A +G +LD F M +D +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA-RNGYYQESLDFFREMY--KDGL 113
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
+D + ++L S L +GK +H ++K + + F +SSLIDMYSK G A
Sbjct: 114 KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALN--------------VFW----------K 167
VFS G DLV NAM++ + + D ALN + W +
Sbjct: 174 VFSDL-GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 168 NPEF--------------NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 213
N E D VSW ++I+G V N E+A F +M+ G+ N T+
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 214 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
++L ACT L +K GK +H + + FV S ++D Y KCG + A ++ K
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
+ +S+I Y++ G KA LFD Q EA
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFD---------------------QMEA--------- 382
Query: 334 TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCG 391
T E L D + +L AC+ LG Q +++ K + +L + +VD+ + G
Sbjct: 383 TGEKL--DHLTFTAILTACSHAGLTDLG-QNLFLLMQNKYRIVPRLEHYACMVDLLGRAG 439
Query: 392 NIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 451
K ++ ++ + + ++PD + AL
Sbjct: 440 ------------------------------------KLVEAYEMIKAMRMEPDLFVWGAL 463
Query: 452 LSACRHRGLVEL 463
L+ACR+ G +EL
Sbjct: 464 LAACRNHGNMEL 475
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F +A++ Y K +++A LF + V++NSM+ YA D A++LF +M
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK-AVELFDQM 380
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKC 123
++ + +D +T T +L + + G+ + M + + + ++D+ +
Sbjct: 381 EATGEK--LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRA 438
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA 161
G EAY + DL A++AAC G M++A
Sbjct: 439 GKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 174/616 (28%), Positives = 296/616 (48%), Gaps = 76/616 (12%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
S + ++ A +K ++ AR +FD S R +V++NS++ AY A++++ M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMIT 158
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKCGS 125
+ + DE TL+++ + L + ++ H V ++S F S+L+DMY K G
Sbjct: 159 --NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYV 185
REA V+D V E D V LI GY
Sbjct: 217 TREA-------KLVLDRV--------------------------EEKDVVLITALIVGYS 243
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
Q G A+ F M+ + ++ N++T ASVL +C LK + GK +H L++K+
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS------- 296
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER 304
G +S A+ +SL+ Y + + R+F +
Sbjct: 297 -------------------------GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP 331
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N V WT+L SG V++ + E FR+ +++ P++ + + L C+ A G+Q
Sbjct: 332 NQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
H + + + D+ S L+D+Y KCG A F T S+ DVI N MI YA +G
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD--TLSEVDVISLNTMIYSYAQNG 448
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
F +A+ LF+ M+ + L+P+ +T +++L AC + LVE G + F S ++D +L HY
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHY 507
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
ACMVD+ GR +LE+A E + I D +W L+ACK++ + ++ ++L++E
Sbjct: 508 ACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT-SH 603
+ + ++N+YA+ GKWN + ++ +M+ + K P SW+ + H F +GD SH
Sbjct: 567 GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Query: 604 SKADAIYSTLVCLYGK 619
++ I L L K
Sbjct: 627 PNSEQILENLEELIKK 642
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 199/457 (43%), Gaps = 55/457 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F +A++ Y+K +A+ + D +D+V +++ Y+ G DT A+ F M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS-QKGEDTEAVKAFQSM 258
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + +E T ++L L+ + GK +H MVK+ + + + +SL+ MY +C
Sbjct: 259 LVEK--VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
++ VF C + VS ++++ ++G+ +MAL F K
Sbjct: 317 LVDDSLRVFK-CIEYPNQVSWTSLISGLVQNGREEMALIEFRK----------------- 358
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
M+ I+ N TL+S L C+ L + G+ +H +V K ++
Sbjct: 359 ---------------MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK 403
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS-- 302
+ SG++D Y KCG A V+ + + +++I Y+ G +A LF+ +
Sbjct: 404 YAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL 463
Query: 303 --ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ N V ++ S+ E +LF FR D +++ N AC +
Sbjct: 464 GLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR------KDKIMLTNDHYACMVDLLGRA 517
Query: 361 GKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAE----KSFQLVTDSDRDVILYNV 415
G+ A +L T+ +N D L L+ + AE K ++ + +IL +
Sbjct: 518 GRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSN 577
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPD-AITFVAL 451
+ YA G N+ I++ +M + LK + A+++V +
Sbjct: 578 L---YASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEI 611
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 40/249 (16%)
Query: 210 HTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG 269
H + +L C + + K + A +LK+ G + S +VD KCG++ YA
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKS-GFPAEISGSKLVDASLKCGDIDYA------ 118
Query: 270 IGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLF 329
+++FD +SER+ V W +L + +K ++ + +++
Sbjct: 119 -------------------------RQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMY 153
Query: 330 REFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK-LASALVDMYS 388
R T ++PD + +V A + + +++H + L + + SALVDMY
Sbjct: 154 R-LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 212
Query: 389 KCGNIAYAEKSFQLVTD--SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 446
K G A +LV D ++DV+L +I GY+ G + +A++ FQ ML ++P+
Sbjct: 213 KFGKTREA----KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEY 268
Query: 447 TFVALLSAC 455
T+ ++L +C
Sbjct: 269 TYASVLISC 277
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 242/470 (51%), Gaps = 44/470 (9%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
D + N +V + + +++ A +F + E N VSW ++I+GY G + AL++F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPN-VVSWTSVISGYNDMGKPQNALSMFQKM 121
Query: 201 IE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
E + + N++T ASV AC+ L ++GK +HA + + N VSS +VD Y KC +
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL--SERNYVVWTALCSGYV 317
+ A+R+FDS+ RN V WT++ + Y
Sbjct: 182 VE-------------------------------TARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 318 KSQQCEAVFKLFREFRTTEALIPD---TMIIVNVLGACAIQATLSLGKQTHAYILRTKLN 374
++ + +LFR F AL D ++ +V+ AC+ L GK H + R
Sbjct: 211 QNARGHEAIELFRSFNA--ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 375 MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
+ +A++L+DMY+KCG+++ AEK F + VI Y MI A HG A++LF
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRI--RCHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 435 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 494
EM+ + P+ +T + +L AC H GLV G ++ M E Y V+P+ HY C+VDM GR
Sbjct: 327 EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 495 NQLEKAVEFMRKIPIQID--ASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
++++A E + I + + A +WGA L+A +++ +V +A + L++ S Y+
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTS 602
L+N YA G W + +R EM+ K CSWI ++ ++VF +GD S
Sbjct: 447 LSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLS 496
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 202/481 (41%), Gaps = 78/481 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F+ N ++++Y+K + AR LFD ++VS+ S++S Y G AL +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM-GKPQNALSMFQKM 121
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
R + +E T ++ + L GK +H+ + + + SSL+DMY KC
Sbjct: 122 HEDR-PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCN 180
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A VF D + NV VSW ++I Y
Sbjct: 181 DVETARRVF---------------------DSMIGYGRNV----------VSWTSMITAY 209
Query: 185 VQNGYMERALTLF--IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
QN A+ LF NQ LASV+SAC+ L L+ GK H LV + S
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
N V++ ++D Y KCG++ AE ++ I S + +S+I M KAK
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI--------MAKAKHGLG--- 318
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
EA KLF E + P+ + ++ VL AC+ ++ G
Sbjct: 319 --------------------EAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 363 QTHAYILRTKLNM--DEKLASALVDMYSKCGNIAYA-EKSFQLVTDSDRDVILYNVMIAG 419
+ + ++ K + D + + +VDM + G + A E + + +++ +L+ +++
Sbjct: 358 E-YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
Query: 420 YAHHGFENKAIQLFQEMLKISLKPD---AITFVALLSACRHRGLVELGEKFFMSMKEDYN 476
HG +++ E K ++ + ++AL +A G E E + MK N
Sbjct: 417 GRLHG----RVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGN 472
Query: 477 V 477
V
Sbjct: 473 V 473
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDS--ASHRDLVSYNSMLSAYA-GADGCDTVALDL 60
RN ++++ Y K +++ AR +FDS R++VS+ SM++AYA A G + A++L
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHE--AIEL 221
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F +A + ++ L ++++ + L + +GK H + + + + +SL+DMY
Sbjct: 222 FRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMY 281
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KCGS A +F + C + +S+ ++
Sbjct: 282 AKCGSLSCAEKIF--------------LRIRC-------------------HSVISYTSM 308
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
I ++G E A+ LF EM+ I N TL VL AC+
Sbjct: 309 IMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/584 (28%), Positives = 283/584 (48%), Gaps = 75/584 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+ +I Y+K ++ AR LFD S RD+VS+ +M+S ++ G AL LF M R+
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC-GYHPDALLLFKEMH--RE 107
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ ++ T ++L L + G Q+H + K
Sbjct: 108 DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK-------------------------- 141
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
C G +L+ ++A+++ R GKM+ A F E D VSWN +I GY N
Sbjct: 142 ----GNCAG--NLIVRSALLSLYARCGKMEEARLQFDSMKE-RDLVSWNAMIDGYTANAC 194
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ + +LF M+ +G + + T S+L A +KCL++ +H L +K
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK------------ 242
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
G G +S SL+ Y G++ A +L + +R+ +
Sbjct: 243 ------------------LGFG-RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 310 TALCSGYVKSQQCEA-VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
TAL +G+ + C + F +F++ + + D +++ ++L C A++++G+Q H +
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKM-DEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 369 LRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
L++ ++ D L ++L+DMY+K G I A +F+ + ++DV + +IAGY HG
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEM--KEKDVRSWTSLIAGYGRHGNFE 400
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
KAI L+ M +KP+ +TF++LLSAC H G ELG K + +M + + H +C+
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 488 VDMYGRGNQLEKAVEFMRKIP--IQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEAD 545
+DM R LE+A +R + + +S WGAFL+AC+ + N L K A +LL +E
Sbjct: 461 IDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR 520
Query: 546 NGSRYVQLANVYAAEGKWNEMGRIRKEMR-GKEATKLPGCSWIY 588
Y+ LA+VYAA G W+ RK M+ K PG S +Y
Sbjct: 521 KPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLVY 564
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 51/417 (12%)
Query: 142 LVSKNAMVAACCRDGKM-DMALNVFWKNPEFN------------DTVSWNTLIAGYVQNG 188
L+ N++ C + ++ DM ++++ K + D VSW +I+ + + G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
Y AL LF EM + ++ NQ T SVL +C L CLK G +H V K + N V S
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y +CG M +A+ FDS+ ER+ V
Sbjct: 153 ALLSLYARCGKME-------------------------------EARLQFDSMKERDLVS 181
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W A+ GY + + F LF + TE PD ++L A + L + + H
Sbjct: 182 WNAMIDGYTANACADTSFSLF-QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH-GFEN 427
++ L +LV+ Y KCG++A A K + RD++ +I G++ +
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE--GTKKRDLLSCTALITGFSQQNNCTS 298
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
A +F++M+++ K D + ++L C V +G + + + ++ +
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 488 VDMYGRGNQLEKAV---EFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
+DMY + ++E AV E M++ ++ S+ + L + E E +K
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 175/447 (39%), Gaps = 95/447 (21%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M R+ SWNA+I Y A+ C + L
Sbjct: 174 MKERDLVSWNAMIDGYT--------------------------------ANACADTSFSL 201
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M + + D T ++L S ++ + ++H +K S + SL++ Y
Sbjct: 202 FQLMLT--EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAY 259
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
KCGS A+ + G + D +S L
Sbjct: 260 VKCGSLANAWKLHEG---------------------------------TKKRDLLSCTAL 286
Query: 181 IAGYV-QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
I G+ QN A +F +MI + ++ ++S+L CT + + +G+ +H LK+
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 240 GCS-NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
+ + + ++D Y K G + A + + K + +SLIAGY GN KA L+
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLY 406
Query: 299 DSLS-ER---NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA--- 351
+ + ER N V + +L S + Q E +K++ DTMI + + A
Sbjct: 407 NRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIY-----------DTMINKHGIEAREE 455
Query: 352 ---CAIQATLSLGKQTHAY-ILRTK---LNMDEKLASALVDMYSKCGNIAYAE-KSFQLV 403
C I G AY ++R+K +++ A +D + GN+ ++ + QL+
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL 515
Query: 404 TDSDRDVILYNVMIAGYAHHGFENKAI 430
+ R + Y + + YA +G + A+
Sbjct: 516 SMEPRKPVNYINLASVYAANGAWDNAL 542
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 272/585 (46%), Gaps = 77/585 (13%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
A++ Y K L A +FD RD+V++N+M+S ++ C T + LF M+ D
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS-LHCCLTDVIGLFLDMRRI-D 199
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT--ANDLSKFALSSLIDMYSKCGSFR 127
+ + T+ M + + GK +H Y + +NDL + ++D+Y+K
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL--VVKTGILDVYAKSKCII 257
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A VF +D F KN V+W+ +I GYV+N
Sbjct: 258 YARRVFD-----------------------LD-----FKKN-----EVTWSAMIGGYVEN 284
Query: 188 GYMERALTLFIEMI--EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
++ A +F +M+ + + +L C L G+CVH +K +
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
V + I+ FY K G++ A R F + ++
Sbjct: 345 VQNTIISFYAK-------------------------------YGSLCDAFRQFSEIGLKD 373
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
+ + +L +G V + + E F+LF E RT+ + PD ++ VL AC+ A L G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
Y + ++ + +AL+DMY+KCG + A++ F T RD++ +N M+ G+ HG
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD--TMHKRDIVSWNTMLFGFGIHGL 490
Query: 426 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHY 484
+A+ LF M + + PD +T +A+LSAC H GLV+ G++ F SM + D+NV+P I HY
Sbjct: 491 GKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY 550
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
CM D+ R L++A +F+ K+P + D + G L+AC N L + +++ +
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-G 609
Query: 545 DNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 589
+ V L+N Y+A +W + RIR + + K PG SW+ V
Sbjct: 610 ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 37/297 (12%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN-DTVSWNTLIAGYVQNGYMERALTLFIEM 200
LV+ + A+C ++++A +VF + P + ++W+ +I Y N + E+AL L+ +M
Sbjct: 38 LVNLTRLYASC---NEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+ G+ ++T VL AC GL+ + GK +H+ V +D ++ +V + +VDFY KCG +
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
A V FD + +R+ V W A+ SG+
Sbjct: 155 EMAIKV-------------------------------FDEMPKRDMVAWNAMISGFSLHC 183
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
V LF + R + L P+ IV + A L GK H Y R + D +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
+ ++D+Y+K I YA + F L D ++ + ++ MI GY + +A ++F +ML
Sbjct: 244 TGILDVYAKSKCIIYARRVFDL--DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 285 YSSKGNMTKAKRLFDSLSER--NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
Y+S + A+ +FD + N + W + Y + E L+ + + + P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNS-GVRPTK 103
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
VL ACA + GK H+++ + D + +ALVD Y+KCG + A K F
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLV 461
+ RD++ +N MI+G++ H I LF +M +I L P+ T V + A G +
Sbjct: 164 M--PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 462 ELGE 465
G+
Sbjct: 222 REGK 225
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 344 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK-LASALVDMYSKCGNIAYAEKSFQL 402
+ +++L C L LG+ H ++L+ L + + L +Y+ C + A F
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ + I +++MI YA + F KA+ L+ +ML ++P T+ +L AC ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
G K S + ++Y +VD Y + +LE A++ ++P + D W A ++
Sbjct: 121 DG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISG 178
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 231/440 (52%), Gaps = 38/440 (8%)
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WNTL GYV+N +L L+ +M + G+ ++ T V+ A + L G +HA V+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 237 KND-GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
K GC +GI + L+ Y G ++ A+
Sbjct: 137 KYGFGC----------------------------LGI----VATELVMMYMKFGELSSAE 164
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
LF+S+ ++ V W A + V++ + F + +A+ D+ +V++L AC
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSACGQL 223
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+L +G++ + + +++ + + +A +DM+ KCGN A F+ + R+V+ ++
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM--KQRNVVSWST 281
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF--MSMKE 473
MI GYA +G +A+ LF M L+P+ +TF+ +LSAC H GLV G+++F M
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVK 533
D N+ P HYACMVD+ GR LE+A EF++K+P++ D IWGA L AC ++ + L +
Sbjct: 342 DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQ 401
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
+ + L++ D GS +V L+N+YAA GKW+ + ++R +MR K+ S + E I
Sbjct: 402 KVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKI 461
Query: 594 HVFTSGDTSHSKADAIYSTL 613
H F GD SH ++ AIY L
Sbjct: 462 HFFNRGDKSHPQSKAIYEKL 481
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++M Y+K L+ A LF+S +DLV++N+ L A G +AL+ F +M D +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL-AVCVQTGNSAIALEYFNKM--CADAV 206
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D T+ +ML+ +L + G++++ K D + ++ +DM+ KCG+ A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA-- 264
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
V ++ + + VSW+T+I GY NG
Sbjct: 265 -------------------------------RVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
ALTLF M +G+ N T VLSAC+ + GK +L+++++
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 154/390 (39%), Gaps = 76/390 (19%)
Query: 21 NLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDT-IGMDEITLT 79
++ AR +FD + +N++ Y + +L L+ +M RD + DE T
Sbjct: 58 DMCYARQVFDEMHKPRIFLWNTLFKGYV-RNQLPFESLLLYKKM---RDLGVRPDEFTYP 113
Query: 80 TMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV 139
++ ++L G +H+++VK + L+ MY K G A +F
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLF------ 167
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
++ + D V+WN +A VQ G AL F +
Sbjct: 168 ---------------------------ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 200
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M ++++ T+ S+LSAC L L++G+ ++ K + N V + +D + KCGN
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTAL--- 312
A ++ + ++ + S++I GY+ G+ +A LF ++ NYV + +
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 313 CSGYVKSQQCEAVFKLF-------------------------------REFRTTEALIPD 341
CS + + F L EF + PD
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRT 371
T I +LGACA+ + LG++ ++ T
Sbjct: 381 TGIWGALLGACAVHRDMILGQKVADVLVET 410
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 289 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
G+M A+++FD + + +W L GYV++Q L+++ R + PD V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRPDEFTYPFV 115
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR 408
+ A + S G HA++++ +A+ LV MY K G ++ AE F+ + +
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE--SMQVK 173
Query: 409 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF 468
D++ +N +A G A++ F +M +++ D+ T V++LSAC G +E+GE+ +
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 469 MSMKE---DYNVLPE 480
++ D N++ E
Sbjct: 234 DRARKEEIDCNIIVE 248
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N NA + ++K N AR LF+ R++VS+++M+ YA +G AL LF M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYA-MNGDSREALTLFTTM 302
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN---DLSKFALSSLIDMYS 121
Q+ + + + +T +L+ + +V GK+ S MV++ + + K + ++D+
Sbjct: 303 QN--EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAAC 152
+ G EAY D A++ AC
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
K+ HA +LRT + L + L++ G++ YA + F + + L+N + GY
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP--RIFLWNTLFKGYV 85
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
+ +++ L+++M + ++PD T+ ++ A G G + +
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-------- 137
Query: 482 YHYAC-------MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTL 531
Y + C +V MY + +L A EF+ + D W AFL C N+ +
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSA-EFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/612 (26%), Positives = 274/612 (44%), Gaps = 75/612 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+A+ N++I Y+K +AR LFD R++VS+ +M+ Y + G D L LF M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNS-GFDFEVLKLFKSM 126
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ ++ +E T + + + GKQ H +K +F ++L+ MYS C
Sbjct: 127 FFSGES-RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS 185
Query: 125 SFREAYNVFSG---CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLI 181
EA V CD L+VF ++ +
Sbjct: 186 GNGEAIRVLDDLPYCD------------------------LSVF------------SSAL 209
Query: 182 AGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGC 241
+GY++ G + L + + + +N T S L + L+ L L VH+ +++
Sbjct: 210 SGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
+ +++ Y KCG + YA+ R+FD
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQ-------------------------------RVFDDT 298
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
+N + T + Y + + E LF + T E + P+ +L + A + L G
Sbjct: 299 HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQG 357
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
H +L++ + +ALV+MY+K G+I A K+F +T RD++ +N MI+G +
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF--RDIVTWNTMISGCS 415
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
HHG +A++ F M+ P+ ITF+ +L AC H G VE G +F + + ++V P+I
Sbjct: 416 HHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDI 475
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
HY C+V + + + A +FMR PI+ D W LNAC + N L K+ E ++
Sbjct: 476 QHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIE 535
Query: 542 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDT 601
++ YV L+N++A +W + ++R M + K PG SWI + N HVF + D
Sbjct: 536 KYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDN 595
Query: 602 SHSKADAIYSTL 613
H + IY+ +
Sbjct: 596 QHPEITLIYAKV 607
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 257 CGN---MRYAESVYAGIGI-------KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY 306
C N +R ES++A + + + + +SLI Y +A++LFD + ERN
Sbjct: 41 CANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
V W A+ GY S V KLF+ + P+ + V +C+ + GKQ H
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHG 160
Query: 367 YILRTKLNMDEKLASALVDMYSKC-GN 392
L+ L E + + LV MYS C GN
Sbjct: 161 CFLKYGLISHEFVRNTLVYMYSLCSGN 187
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNM---DEKLASALVDMYSKCGNIAYAEKSFQLVT 404
+L CA + L +G+ HA+++ T + D ++L+++Y KC A K F L+
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLM- 95
Query: 405 DSDRDVILYNVMIAGYAHHGFENKAIQLFQEM-LKISLKPDAITFVALLSACRHRGLVEL 463
+R+V+ + M+ GY + GF+ + ++LF+ M +P+ + +C + G +E
Sbjct: 96 -PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 464 GEKF 467
G++F
Sbjct: 155 GKQF 158
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 250/533 (46%), Gaps = 70/533 (13%)
Query: 85 SAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVS 144
SA+ R G Q+H Y+VK+ L ++LI+ YSK ++ F D +
Sbjct: 25 SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE--DSPQKSST 82
Query: 145 KNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKG 204
+ + +C + QN +L +M+
Sbjct: 83 TWSSIISC-------------------------------FAQNELPWMSLEFLKKMMAGN 111
Query: 205 IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
+ + H L S +C L +G+ VH L +K ++ FV S +VD Y KCG E
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG-----E 166
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
VYA +++FD + +RN V W+ + GY + + E
Sbjct: 167 IVYA--------------------------RKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
LF+E E L + +V+ CA L LG+Q H +++ + + S+LV
Sbjct: 201 ALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 385 DMYSKCGNIAYAEKSFQLVTDSD-RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
+YSKCG E ++Q+ + +++ ++N M+ YA H K I+LF+ M +KP
Sbjct: 260 SLYSKCG---VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
+ ITF+ +L+AC H GLV+ G +F MKE + P HYA +VDM GR +L++A+E
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
+ +PI S+WGA L +C ++ NT L A +++ ++ + ++ L+N YAA+G++
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 564 NEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCL 616
+ + RK +R + K G SW+ N +H F +G+ H K+ IY L L
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F ++++ Y K + AR +FD R++V+++ M+ YA G + AL LF
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM-GENEEALWLFK-- 206
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
++ + + +++ + ++++++ A ++ G+Q+H +K++ D S F SSL+ +YSKCG
Sbjct: 207 EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
AY VF+ ++ KN + WN ++ Y
Sbjct: 267 VPEGAYQVFN------EVPVKNLGI---------------------------WNAMLKAY 293
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
Q+ + ++ + LF M G++ N T +VL+AC+
Sbjct: 294 AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 223/434 (51%), Gaps = 33/434 (7%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
N++I Y + E ALT+F EM+ + ++++ VL AC + G+ +H L +K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 238 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 297
+ ++ FV + +V+ Y + G A V + ++ + +SL++ Y KG + +A+ L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 298 FDSLSERNYVVWTALCSGYVKS---QQCEAVF---------------------------- 326
FD + ERN W + SGY + ++ + VF
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 327 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDM 386
++F + PD +V+VL ACA +LS G+ H YI + + ++ LA+ALVDM
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 387 YSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAI 446
YSKCG I A + F+ S RDV +N +I+ + HG A+++F EM+ KP+ I
Sbjct: 349 YSKCGKIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 447 TFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRK 506
TF+ +LSAC H G+++ K F M Y V P I HY CMVD+ GR ++E+A E + +
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 507 IPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEM 566
IP + + + L ACK ++ LL++ + S Y Q++N+YA++G+W ++
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Query: 567 GRIRKEMRGKEATK 580
R+ MR + +
Sbjct: 527 IDGRRNMRAERVNR 540
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 82/345 (23%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGAD--------- 51
MP R+A SWN+++ AY++ + +ARALFD R++ S+N M+S YA A
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260
Query: 52 ---------------------GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 90
GC L++F +M T D TL ++L+ A L
Sbjct: 261 DSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD-DSTEKPDGFTLVSVLSACASLGS 319
Query: 91 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 150
+ G+ +H Y+ K ++ F ++L+DMYSKC
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC--------------------------- 352
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
GK+D AL VF + D +WN++I+ +G + AL +F EM+ +G + N
Sbjct: 353 -----GKIDKALEVFRATSK-RDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 211 TLASVLSACTGLKCLKLGKCVHALV---------LKNDGCSNQFVSSGIVDFYCKCGNMR 261
T VLSAC + L + + ++ +++ GC +VD + G +
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC--------MVDLLGRMGKIE 458
Query: 262 YAESVYAGIGI-KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
AE + I ++ SL+ G + +A+R+ + L E N
Sbjct: 459 EAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELN 503
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 275/575 (47%), Gaps = 62/575 (10%)
Query: 29 FDSASHRDLVSY-NSMLSAYAGAD----GCDTVALDLFARMQSARDT--------IGMDE 75
F R++V+Y +L + G D GC L + + D I
Sbjct: 45 FTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSS 104
Query: 76 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSG 135
+T++L K+ + GK +H+ +K + + L+ +YS+ G A F
Sbjct: 105 HAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAF-- 162
Query: 136 CDGVVD--LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 193
D + + VS N+++ G++D A VF K PE D VSWN +I+ Y + G M A
Sbjct: 163 -DDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE-KDAVSWNLIISSYAKKGDMGNA 220
Query: 194 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
+LF A+ LK+ N +
Sbjct: 221 CSLF----------------------------------SAMPLKSPASWNILIGG----- 241
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
Y C M+ A + + + K+ + ++I+GY+ G++ A+ LF +S+++ +V+ A+
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
+ Y ++ + + KLF + + I PD + + +V+ A + S G +YI
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
+ +D+ L+++L+D+Y K G+ A A K F + + +D + Y+ MI G +G +A L
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL--NKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F M++ + P+ +TF LLSA H GLV+ G K F SMK D+N+ P HY MVDM G
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLG 478
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
R +LE+A E ++ +P+Q +A +WGA L A ++NN + A +K+E D
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
LA +Y++ G+W++ +R ++ K+ K GCSW+
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP +N SW +I Y K ++ A LF S +D + Y++M++ Y +G AL L
Sbjct: 258 MPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT-QNGKPKDALKL 316
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
FA+M I DEITL+++++ +++L +G + SY+ + + +SLID+Y
Sbjct: 317 FAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY 376
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
K G F +A+ +FS N DTVS++ +
Sbjct: 377 MKGGDFAKAFKMFS---------------------------------NLNKKDTVSYSAM 403
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG-KCVHAL 234
I G NG A +LF MIEK I N T +LSA + ++ G KC +++
Sbjct: 404 IMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 458
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 23/335 (6%)
Query: 25 ARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNL 84
A+ FD + ++ VS+NS+L Y + D A +F ++ D ++ +++
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLESGELDE-ARRVFDKIPEK------DAVSWNLIISS 210
Query: 85 SAKLRVVCYGKQMHSYMVKTANDL-SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLV 143
AK G ++ + +A L S + + LI Y C + A F + V
Sbjct: 211 YAK-----KGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ-KNGV 264
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEK 203
S M++ + G + A +F + D + ++ +IA Y QNG + AL LF +M+E+
Sbjct: 265 SWITMISGYTKLGDVQSAEELF-RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 204 G--IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
I+ ++ TL+SV+SA + L G V + + ++ + +S+ ++D Y K G+
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYV 317
A +++ + K + S++I G G T+A LF ++ E+ N V +T L S Y
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 318 KSQQCEAVFKLFREFR--TTEALIPDTMIIVNVLG 350
S + +K F + E I+V++LG
Sbjct: 444 HSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLG 478
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 264/582 (45%), Gaps = 71/582 (12%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
++ AR +FD R + YNSM+ Y+ D V L L+ +M + + I D T T
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV-LRLYDQMIAEK--IQPDSSTFTMT 122
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
+ V+ G+ + V F SS++++Y KCG EA +F
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF-------- 174
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
GKM D + W T++ G+ Q G +A+ + EM
Sbjct: 175 --------------GKMAK-----------RDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
+G ++ + +L A L K+G+ VH + + N V + +VD Y K G +
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQ 321
A R+F + + V W +L SG+ ++
Sbjct: 270 VAS-------------------------------RVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 322 CEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 381
F+ E ++ PD + +V VL AC+ +L G+ H YIL+ + +D A+
Sbjct: 299 ANKAFEAVVEMQSL-GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTAT 356
Query: 382 ALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISL 441
AL+DMYSKCG ++ + + F+ V +D++ +N MI+ Y HG + + LF +M + ++
Sbjct: 357 ALMDMYSKCGALSSSREIFEHV--GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 442 KPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
+PD TF +LLSA H GLVE G+ +F M Y + P HY C++D+ R ++E+A+
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEAL 474
Query: 502 EFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEG 561
+ + + IW A L+ C + N ++ A ++L++ D+ ++N +A
Sbjct: 475 DMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATAN 534
Query: 562 KWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH 603
KW E+ ++RK MR K+PG S I V + F D SH
Sbjct: 535 KWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 193/452 (42%), Gaps = 77/452 (17%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F ++++ Y+K + +A LF + RD++ + +M++ +A A G A++ + M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA-GKSLKAVEFYREM 208
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
Q+ + G D + + +L S L G+ +H Y+ +T ++ +SL+DMY+K G
Sbjct: 209 QN--EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A VFS F VSW +LI+G+
Sbjct: 267 FIEVASRVFS---------------------------------RMMFKTAVSWGSLISGF 293
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
QNG +A +EM G + + TL VL AC+ + LK G+ VH +LK ++
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH-VLDR 352
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER 304
++ ++D Y KCG + + ++ +G K +++I+ Y GN + LF ++E
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N + PD ++L A + + G+
Sbjct: 413 N--------------------------------IEPDHATFASLLSALSHSGLVEQGQHW 440
Query: 365 HAYIL-RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYA 421
+ ++ + K+ EK L+D+ ++ G + E++ ++ D + ++ +++G
Sbjct: 441 FSVMINKYKIQPSEKHYVCLIDLLARAGRV---EEALDMINSEKLDNALPIWVALLSGCI 497
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
+H N ++ + L PD+I L+S
Sbjct: 498 NH--RNLSVGDIAANKILQLNPDSIGIQTLVS 527
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 278 TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
+ LIA G ++ A+++FD L +R V+ ++ Y + + + V +L+ + E
Sbjct: 53 SRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM-IAEK 111
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+ PD+ + AC L G+ + D + S+++++Y KCG + AE
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
F + + RDVI + M+ G+A G KA++ ++EM D + + LL A
Sbjct: 172 VLFGKM--AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 458 RGLVELGEK---FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDAS 514
G ++G + NV+ E +VDMY + +E A ++ + S
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVE----TSLVDMYAKVGFIEVASRVFSRMMFKTAVS 285
Query: 515 IWGAFLNACKINNNTTLVKQAEEELLKVEA 544
WG+ ++ N L +A E ++++++
Sbjct: 286 -WGSLISGFAQNG---LANKAFEAVVEMQS 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 363 QTHAYILRT-KLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
Q HA+++ T L ++ L+ + G I+YA K F + R V +YN MI Y+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDEL--PQRGVSVYNSMIVVYS 92
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
++ ++L+ +M+ ++PD+ TF + AC ++E GE + D+ ++
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCK-AVDFGYKNDV 151
Query: 482 YHYACMVDMYGRGNQLEKA 500
+ + ++++Y + ++++A
Sbjct: 152 FVCSSVLNLYMKCGKMDEA 170
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 270/589 (45%), Gaps = 83/589 (14%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL-FARMQ 65
F N ++ AY K A LFD R++V++N ++ DG L F +
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 66 SARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
T + +D ++ ++ L + G Q+H MVK + S F +SL+ Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
EA VF + V+D D V WN L++ Y
Sbjct: 192 LIVEARRVF---EAVLD------------------------------RDLVLWNALVSSY 218
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQH-----TLASVLSACTGLKCLKLGKCVHALVLKND 239
V NG ++ A L M G + N+ T +S+LSAC ++ GK +HA++ K
Sbjct: 219 VLNGMIDEAFGLLKLM---GSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFK-- 269
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
S QF P AT+ L+ Y+ +++ A+ F+
Sbjct: 270 -VSYQF---------------------------DIPVATA-LLNMYAKSNHLSDARECFE 300
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
S+ RN V W A+ G+ ++ + +LF + E L PD + +VL +CA + +
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM-LLENLQPDELTFASVLSSCAKFSAIW 359
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
KQ A + + +A++L+ YS+ GN++ A F + + D ++ + +I
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD--LVSWTSVIGA 417
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
A HGF +++Q+F+ ML+ L+PD ITF+ +LSAC H GLV+ G + F M E Y +
Sbjct: 418 LASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEEL 539
E HY C++D+ GR +++A + + +P + AF C I+ +K ++L
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKL 536
Query: 540 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRK-EMRGKEATKLPGCSWI 587
L++E Y L+N Y +EG WN+ +RK E R K PGCSW+
Sbjct: 537 LEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-----SQQCEAVFKL 328
S F + L+ Y+ A +LFD + RN V W L G ++ + + F
Sbjct: 70 SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCY 129
Query: 329 FREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYS 388
T+ + D + + ++ C + G Q H +++ L +++LV Y
Sbjct: 130 LSRILFTDVSL-DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYG 188
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEM--LKISLKPDAI 446
KCG I A + F+ V DRD++L+N +++ Y +G ++A L + M K + D
Sbjct: 189 KCGLIVEARRVFEAVL--DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 447 TFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMR 505
TF +LLSACR +E G++ + K Y +I +++MY + N L A E
Sbjct: 247 TFSSLLSACR----IEQGKQIHAILFKVSYQF--DIPVATALLNMYAKSNHLSDARECFE 300
Query: 506 KIPIQIDASIWGAFL 520
+ ++ S W A +
Sbjct: 301 SMVVRNVVS-WNAMI 314
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 249/540 (46%), Gaps = 74/540 (13%)
Query: 109 SKFALSSLIDMYSKCGSFREAYNVFS----GCDGVVDLVSKNAMVAACCRD--------- 155
S + S I+ C FREA+ +F C V + + +A+V AC R
Sbjct: 86 SGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRV 145
Query: 156 --------------------------GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
G + A +F + PE N S+ ++I+G+V G
Sbjct: 146 YGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN-LYSYYSIISGFVNFGN 204
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
A LF M E+ + HT A +L A GL + +GK +H LK N FVS G
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG 264
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
++D Y KC G++ A+ F+ + E+ V W
Sbjct: 265 LIDMYSKC-------------------------------GDIEDARCAFECMPEKTTVAW 293
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
+ +GY E L + R + I D + ++ A L L KQ HA ++
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
R + +ALVD YSK G + A F + +++I +N ++ GYA+HG A
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKL--PRKNIISWNALMGGYANHGRGTDA 410
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
++LF++M+ ++ P+ +TF+A+LSAC + GL E G + F+SM E + + P HYACM++
Sbjct: 411 VKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIE 470
Query: 490 MYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+ GR L++A+ F+R+ P++ ++W A LNAC++ N L + E+L + +
Sbjct: 471 LLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Query: 550 YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAI 609
YV + N+Y + GK E + + + K + +P C+W+ V + H F SGD S + +
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETV 590
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 170/382 (44%), Gaps = 47/382 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N I++ ++K + AR LFD R+L SY S++S + G A +LF M +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF-GNYVEAFELFKMMWE--E 218
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ T ML SA L + GKQ+H +K + F LIDMYSKCG +A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
F C PE TV+WN +IAGY +GY
Sbjct: 279 RCAFE-----------------CM---------------PE-KTTVAWNNVIAGYALHGY 305
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
E AL L +M + G+ +Q TL+ ++ T L L+L K HA +++N S ++
Sbjct: 306 SEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTA 365
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL----SERN 305
+VDFY K G + A V+ + K+ + ++L+ GY++ G T A +LF+ + N
Sbjct: 366 LVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPN 425
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ--ATLSLGKQ 363
+V + A+ S S E +++F + P M AC I+ L +
Sbjct: 426 HVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY-----ACMIELLGRDGLLDE 480
Query: 364 THAYILRTKLNMDEKLASALVD 385
A+I R L + +AL++
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLN 502
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F +I Y K ++ AR F+ + V++N++++ YA G AL L M
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA-LHGYSEEALCLLYDM 316
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + + +D+ TL+ M+ +S KL + KQ H+ +++ + A ++L+D YSK
Sbjct: 317 RDS--GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKW- 373
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
G++D A VF K P N +SWN L+ GY
Sbjct: 374 -------------------------------GRVDTARYVFDKLPRKN-IISWNALMGGY 401
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC 219
+G A+ LF +MI + N T +VLSAC
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 233/442 (52%), Gaps = 40/442 (9%)
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
+WN L GY + ++ ++ EM +GI+ N+ T +L AC L G+ + V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAK 295
LK+ DF VY G ++LI Y + + A+
Sbjct: 140 LKHG-----------FDF-----------DVYVG---------NNLIHLYGTCKKTSDAR 168
Query: 296 RLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
++FD ++ERN V W ++ + V++ + VF+ F E + PD +V +L AC
Sbjct: 169 KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM-IGKRFCPDETTMVVLLSACG-- 225
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
LSLGK H+ ++ +L ++ +L +ALVDMY+K G + YA F+ + D ++V ++
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD--KNVWTWSA 283
Query: 416 MIAGYAHHGFENKAIQLFQEMLK-ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
MI G A +GF +A+QLF +M+K S++P+ +TF+ +L AC H GLV+ G K+F M++
Sbjct: 284 MIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKI 343
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN---NNTTL 531
+ + P + HY MVD+ GR +L +A +F++K+P + DA +W L+AC I+ ++ +
Sbjct: 344 HKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGI 403
Query: 532 VKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 591
++ ++ L+++E V +AN +A W E +R+ M+ + K+ G S + +
Sbjct: 404 GEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGG 463
Query: 592 GIHVFTSGDTSHSKADAIYSTL 613
H F SG S+ +IY L
Sbjct: 464 SFHRFFSGYDPRSEYVSIYELL 485
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 48/341 (14%)
Query: 19 AHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITL 78
A +L AR L +S ++N + Y+ +D ++ +++ M+ R I +++T
Sbjct: 60 AKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDS-PVESIWVYSEMK--RRGIKPNKLTF 116
Query: 79 TTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG 138
+L A + G+Q+ ++K D + ++LI +Y C +A VF
Sbjct: 117 PFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFD---- 172
Query: 139 VVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFI 198
++ +N VSWN+++ V+NG + F
Sbjct: 173 --EMTERN---------------------------VVSWNSIMTALVENGKLNLVFECFC 203
Query: 199 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
EMI K ++ T+ +LSAC G L LGK VH+ V+ + N + + +VD Y K G
Sbjct: 204 EMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSG 261
Query: 259 NMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER-----NYVVWTALC 313
+ YA V+ + K+ + S++I G + G +A +LF + + NYV + +
Sbjct: 262 GLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMI----IVNVLG 350
+ + +K F E + P MI +V++LG
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKIHKIKP-MMIHYGAMVDILG 361
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N +I Y + AR +FD + R++VS+NS+++A +G + + F M R
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV-ENGKLNLVFECFCEMIGKR- 209
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
DE T+ + LSA + GK +HS ++ +L+ ++L+DMY+K G A
Sbjct: 210 -FCPDETTMVVL--LSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF +V KN W +W+ +I G Q G+
Sbjct: 267 RLVFE------RMVDKNV------------------W---------TWSAMIVGLAQYGF 293
Query: 190 MERALTLFIEMI-EKGIEYNQHTLASVLSAC--TGL 222
E AL LF +M+ E + N T VL AC TGL
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGL 329
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 280/572 (48%), Gaps = 86/572 (15%)
Query: 23 TQARALFDSASHRDLVSYNSMLSAYA-GADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
T A LFD RDL S NS LS++ + DT+AL L Q R + + T T +
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFL----QIHRASPDLSSHTFTPV 90
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVD 141
L + L G+Q+H+ M+K + + ++LIDMYSK G ++ VF
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVF-------- 142
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI 201
++ E D VSWN L++G+++NG + AL +F M
Sbjct: 143 -------------------------ESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMY 177
Query: 202 EKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMR 261
+ +E ++ TL+SV+ C LK L+ GK VHA+V+ V G
Sbjct: 178 RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT---GRDLVVLG------------ 222
Query: 262 YAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS-ERNYVVWTALCSGYVKSQ 320
+++I+ YSS G + +A ++++SL+ + V+ +L SG ++++
Sbjct: 223 -----------------TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR 265
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+ F L R P+ ++ + L C+ + L +GKQ H LR D KL
Sbjct: 266 NYKEAFLLMSRQR------PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLK-- 438
+ L+DMY KCG I A F+ + + V+ + MI YA +G KA+++F+EM +
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAI--PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEG 377
Query: 439 ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLE 498
+ P+++TF+ ++SAC H GLV+ G++ F MKE Y ++P HY C +D+ + + E
Sbjct: 378 SGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETE 437
Query: 499 ---KAVEFMRKIPIQ-IDASIWGAFLNACKINNNTTLVKQAEEELLK-VEADNGSRYVQL 553
+ VE M + Q I +IW A L+AC +N + T + L++ +N S YV +
Sbjct: 438 EIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLV 497
Query: 554 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 585
+N YAA GKW+ + +R +++ K K G S
Sbjct: 498 SNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 41/297 (13%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQS 66
S A+I Y K +L + +F+S +DLVS+N++LS + +G AL +FA M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL-RNGKGKEALGVFAAMY- 177
Query: 67 ARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
R+ + + E TL++++ A L+++ GKQ+H+ +V T DL +++I YS G
Sbjct: 178 -RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG-TAMISFYSSVGLI 235
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
EA V++ + D V N++++ C R+
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRN------------------------------- 264
Query: 187 NGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFV 246
Y E L + + N L+S L+ C+ L +GK +H + L+N S+ +
Sbjct: 265 RNYKEAFLLMSRQ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL 318
Query: 247 SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+G++D Y KCG + A +++ I KS + +S+I Y+ G+ KA +F + E
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCE 375
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 222/441 (50%), Gaps = 39/441 (8%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
T + + G G ++ A+ L + G++ T A +L C K GK +HA
Sbjct: 76 TEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHA 132
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
FV ++ Y K L+ Y+ G++
Sbjct: 133 ---------QMFVVGFALNEYLKV----------------------KLLILYALSGDLQT 161
Query: 294 AKRLFDSLSERNYVVWTALCSGYV-KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 352
A LF SL R+ + W A+ SGYV K + E +F ++ + R ++PD +V AC
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLF-IYYDMRQNR-IVPDQYTFASVFRAC 219
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
+ L GK+ HA +++ + + + SALVDMY KC + + + F + S R+VI
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQL--STRNVIT 277
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+ +I+GY +HG ++ ++ F++M + +P+ +TF+ +L+AC H GLV+ G + F SMK
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK 337
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV 532
DY + PE HYA MVD GR +L++A EF+ K P + +WG+ L AC+I+ N L+
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLL 397
Query: 533 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 592
+ A + L+++ NG YV AN YA+ G ++R++M K PG S I ++
Sbjct: 398 ELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Query: 593 IHVFTSGDTSHSKADAIYSTL 613
+H F DTSH ++ IY +
Sbjct: 458 VHRFMKDDTSHRLSEKIYKKV 478
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 163 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 222
+ +++ + D + WN +I+GYVQ G + L ++ +M + I +Q+T ASV AC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 282
L+ GK HA+++K SN V S +VD Y KC + V+ + ++ +SLI
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 283 AGYSSKGNMTKAKRLFDSLSERN--------YVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+GY G +++ + F+ + E VV TA G + + E + + R++
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY-G 341
Query: 335 TEALIPDTMIIVNVLG-ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 393
E +V+ LG A +Q + + +++++ + +L+ GN+
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQ-------EAYEFVMKSPCKEHPPVWGSLLGACRIHGNV 394
Query: 394 AYAE----KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
E K +L + + Y V GYA G A ++ ++M +K D
Sbjct: 395 KLLELAATKFLELDPTNGGN---YVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 450 ALLSACRHRGLVE-----LGEKFFMSMKEDYNVLPEIYHYACMVD 489
L HR + + L EK + + E + +I +Y +D
Sbjct: 452 IELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDGLD 496
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
+++ Y + +L A LF S RDL+ +N+M+S Y G + L ++ M+ R I
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYV-QKGLEQEGLFIYYDMRQNR--I 205
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN 131
D+ T ++ + L + +GK+ H+ M+K + S+L+DMY KC SF + +
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYME 191
VF L ++N ++W +LI+GY +G +
Sbjct: 266 VFD------QLSTRN---------------------------VITWTSLISGYGYHGKVS 292
Query: 192 RALTLFIEMIEKGIEYNQHTLASVLSAC 219
L F +M E+G N T VL+AC
Sbjct: 293 EVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 264/535 (49%), Gaps = 86/535 (16%)
Query: 51 DGCDTVALDLFARMQSARDTIGMDEITL-TTMLNLSAKLRVVCYGKQMH----SYMVKTA 105
+ D+V DL SA+ I + E + ++L LR + +G ++H Y+++
Sbjct: 70 EALDSVITDLET---SAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN 126
Query: 106 NDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 165
+S S L+ +Y+ CG A+ VF D +SK RD
Sbjct: 127 LGIS----SKLVRLYASCGYAEVAHEVF-------DRMSK--------RD---------- 157
Query: 166 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 225
+ +WN+LI+GY + G E A+ L+ +M E G++ ++ T VL AC G+ +
Sbjct: 158 ------SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
Query: 226 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGY 285
++G+ +H ++K + +V + +V Y KCG++
Sbjct: 212 QIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDI------------------------- 246
Query: 286 SSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
KA+ +FD + ++YV W ++ +GY+ +FR + PD + I
Sbjct: 247 ------VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR-LMVQNGIEPDKVAI 299
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
+VL + G+Q H +++R + + +A+AL+ +YSK G + A F + +
Sbjct: 300 SSVLARVL---SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
RD + +N +I+ H + ++ F++M + + KPD ITFV++LS C + G+VE GE
Sbjct: 357 --RDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGE 411
Query: 466 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM-RKIPIQIDASIWGAFLNACK 524
+ F M ++Y + P++ HYACMV++YGR +E+A + +++ ++ ++WGA L AC
Sbjct: 412 RLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACY 471
Query: 525 INNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEM--RGKE 577
++ NT + + A + L ++E DN + L +Y+ + ++ R+R+ M RG E
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 206/488 (42%), Gaps = 119/488 (24%)
Query: 25 ARALFDSASHRD--LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTML 82
A +FD S RD ++NS++S YA G A+ L+ +M A D + D T +L
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAEL-GQYEDAMALYFQM--AEDGVKPDRFTFPRVL 202
Query: 83 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL 142
+ V G+ +H +VK + L++L+ MY+KCG +A NVF D+
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVF-------DM 255
Query: 143 VSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 202
+ V+ WN+++ GY+ +G + AL +F M++
Sbjct: 256 IPHKDYVS--------------------------WNSMLTGYLHHGLLHEALDIFRLMVQ 289
Query: 203 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 262
GIE ++ ++SVL+ K G+ +H V++ M +
Sbjct: 290 NGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRR--------------------GMEW 326
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC 322
SV ++LI YS +G + +A +FD + ER+ V W A+ S + K+
Sbjct: 327 ELSV-----------ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG 375
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA-- 380
K F + A PD + V+VL CA + G++ + ++ + +D K+
Sbjct: 376 ---LKYFEQMHRANAK-PDGITFVSVLSLCANTGMVEDGERLFS-LMSKEYGIDPKMEHY 430
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+ +V++Y + G + E+++ ++ QEM
Sbjct: 431 ACMVNLYGRAGMM---EEAYSMIV-----------------------------QEM---G 455
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH-YACMVDMYGRGNQLEK 499
L+ + ALL AC G ++GE ++ + + + P+ H + ++ +Y + + E
Sbjct: 456 LEAGPTVWGALLYACYLHGNTDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Query: 500 AVEFMRKI 507
VE +R++
Sbjct: 513 -VERVRQM 519
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 50/331 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ + NA+++ Y K ++ +AR +FD H+D VS+NSML+ Y G ALD+F M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL-HHGLLHEALDIFRLM 287
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
++ I D++ ++++L A++ +G+Q+H ++++ + ++LI +YSK G
Sbjct: 288 --VQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRG 342
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+A +F D L DTVSWN +I+ +
Sbjct: 343 QLGQACFIF-------------------------DQMLE--------RDTVSWNAIISAH 369
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+N L F +M + + T SVLS C ++ G+ + +L+ K G +
Sbjct: 370 SKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK 426
Query: 245 FVSSG-IVDFYCKCGNMRYAES-VYAGIGIKS-PFATSSLIAGYSSKGNM----TKAKRL 297
+V+ Y + G M A S + +G+++ P +L+ GN A+RL
Sbjct: 427 MEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL 486
Query: 298 FDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
F+ L N + L Y K+++ E V ++
Sbjct: 487 FE-LEPDNEHNFELLIRIYSKAKRAEDVERV 516
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 15/214 (7%)
Query: 317 VKSQQCEAVFKLFREFRTTEAL---IPDTMIIVNVLGACAIQATLSLGKQTH----AYIL 369
+ Q EA+ + + T+ + + I ++L C + G + H Y+L
Sbjct: 64 IHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLL 123
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
R L ++S LV +Y+ CG A + F ++ D +N +I+GYA G A
Sbjct: 124 RNNLG----ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM-KEDYNVLPEIYHYACMV 488
+ L+ +M + +KPD TF +L AC G V++GE + KE + ++Y +V
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY--DVYVLNALV 237
Query: 489 DMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
MY + + KA IP + D W + L
Sbjct: 238 VMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTG 270
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 4 RNAFSW-----NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVAL 58
R W NA+I+ Y K L QA +FD RD VS+N+++SA++ ++ L
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK----NSNGL 376
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAN-DLSKFALSSLI 117
F +M R D IT ++L+L A +V G+++ S M K D + ++
Sbjct: 377 KYFEQMH--RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 118 DMYSKCGSFREAYNVFSGCDGV-VDLVSKNAMVAACCRDGKMDM----ALNVFWKNPEFN 172
++Y + G EAY++ G+ A++ AC G D+ A +F P +
Sbjct: 435 NLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEP--D 492
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
+ ++ LI Y + E + M+++G+E
Sbjct: 493 NEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 198/360 (55%), Gaps = 7/360 (1%)
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYV 317
G ++ +++ + ++L+ YS+ N T A ++FD + +R+ V W L S Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 318 KSQQCEAVFKLFREFR--TTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
++++ V LF + + + PD + + L ACA L GKQ H +I L+
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 376 DEKLASALVDMYSKCGNIAYAEKSFQLVTD-SDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
L++ LV MYS+CG++ +K++Q+ +R+V+ + +I+G A +GF +AI+ F
Sbjct: 251 ALNLSNTLVSMYSRCGSM---DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 435 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE-DYNVLPEIYHYACMVDMYGR 493
EMLK + P+ T LLSAC H GLV G FF M+ ++ + P ++HY C+VD+ GR
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 494 GNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL 553
L+KA ++ + ++ D++IW L AC+++ + L ++ L++++A+ YV L
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 554 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
N Y+ GKW ++ +R M+ K PGCS I ++ +H F D SH + + IY L
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 16 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD-TIGMD 74
Y N T A +FD RD VS+N + S Y V L LF +M++ D + D
Sbjct: 158 YSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV-LVLFDKMKNDVDGCVKPD 216
Query: 75 EITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS 134
+T L A L + +GKQ+H ++ + + ++L+ MYS+CGS +AY VF
Sbjct: 217 GVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFY 276
Query: 135 GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERAL 194
G + +N VSW LI+G NG+ + A+
Sbjct: 277 G------MRERNV---------------------------VSWTALISGLAMNGFGKEAI 303
Query: 195 TLFIEMIEKGIEYNQHTLASVLSACT 220
F EM++ GI + TL +LSAC+
Sbjct: 304 EAFNEMLKFGISPEEQTLTGLLSACS 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 133/346 (38%), Gaps = 72/346 (20%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM---IEKGIEYNQHTLASVLS 217
A VF + P+ DTVSWN L + Y++N L LF +M ++ ++ + T L
Sbjct: 167 ACKVFDEIPK-RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 218 ACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFA 277
AC L L GK VH + +N +S+ +V Y +CG+M A V+ G
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG-------- 277
Query: 278 TSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
+ ERN V WTAL SG + + + F E
Sbjct: 278 -----------------------MRERNVVSWTALISGLAMNGFGKEAIEAFNEM-LKFG 313
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+ P+ + +L AC +H+ ++ + +++ S
Sbjct: 314 ISPEEQTLTGLLSAC-----------SHSGLVAEGMMFFDRMRSG--------------- 347
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH 457
F++ + Y ++ +KA L + M +KPD+ + LL ACR
Sbjct: 348 -EFKIKPNLHH----YGCVVDLLGRARLLDKAYSLIKSM---EMKPDSTIWRTLLGACRV 399
Query: 458 RGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
G VELGE+ + E E Y +++ Y + EK E
Sbjct: 400 HGDVELGERVISHLIELKA--EEAGDYVLLLNTYSTVGKWEKVTEL 443
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
++RL +LS N T + + + CE F+LFR R +L + + L C
Sbjct: 70 SQRLNPTLSHCN----TMIRAFSLSQTPCEG-FRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
L G Q H I D L + L+D+YS C N A K F + RD + +
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI--PKRDTVSW 182
Query: 414 NVMIAGYAHHGFENKAIQLFQEM---LKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
NV+ + Y + + LF +M + +KPD +T + L AC + G ++ G++
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF 242
Query: 471 MKEDYNVLPEIYHYA-CMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNT 529
+ E N L + + +V MY R ++KA + + + + W A ++ +N
Sbjct: 243 IDE--NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFG 299
Query: 530 TLVKQAEEELLK 541
+A E+LK
Sbjct: 300 KEAIEAFNEMLK 311
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 230/442 (52%), Gaps = 54/442 (12%)
Query: 158 MDMALNVFWKNPEFNDTVS-WNTLIAGYVQNGYMER---ALTLFIEMIEKG---IEYNQH 210
+ AL++ + P N +V +NTLI+ V N + A +L+ +++ + N+
Sbjct: 56 LSYALSILRQIP--NPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEF 113
Query: 211 TLASVLSACTGL--KCLKLGKCVHALVLK--NDGCSNQFVSSGIVDFYCKCGNMRYAESV 266
T S+ A +G + + G+ +HA VLK ++FV + +V FY CG +R
Sbjct: 114 TYPSLFKA-SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR----- 167
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQC---E 323
+A+ LF+ + E + W L + Y S++ E
Sbjct: 168 --------------------------EARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
V LF + P+ + +V ++ +CA G H Y+L+ L +++ + ++L
Sbjct: 202 EVLLLFMRMQVR----PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
+D+YSKCG +++A K F + S RDV YN MI G A HGF + I+L++ ++ L P
Sbjct: 258 IDLYSKCGCLSFARKVFDEM--SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
D+ TFV +SAC H GLV+ G + F SMK Y + P++ HY C+VD+ GR +LE+A E
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 504 MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKW 563
++K+P++ +A++W +FL + + + + + A + LL +E +N YV L+N+YA +W
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Query: 564 NEMGRIRKEMRGKEATKLPGCS 585
++ + R+ M+ K PG S
Sbjct: 436 TDVEKTRELMKDHRVNKSPGIS 457
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 175/441 (39%), Gaps = 107/441 (24%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P+ + F +N +I + + HN TQ +A L
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTH-----------------------------LAFSL 96
Query: 61 FARMQSARDT-IGMDEITLTTMLNLSA-KLRVVCYGKQMHSYMVKTANDLS--KFALSSL 116
+ ++ S+R + +E T ++ S + +G+ +H++++K ++ +F ++L
Sbjct: 97 YDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAAL 156
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
+ Y+ CG REA ++F R + D+A +
Sbjct: 157 VGFYANCGKLREARSLFE-------------------RIREPDLA--------------T 183
Query: 177 WNTLIAGYVQNGYM---ERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
WNTL+A Y + + E L LF+ M + N+ +L +++ +C L G H
Sbjct: 184 WNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHV 240
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
VLKN+ NQFV + ++D Y KCG + +
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSF------------------------------- 269
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
A+++FD +S+R+ + A+ G + +L++ ++ L+PD+ V + AC+
Sbjct: 270 ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL-ISQGLVPDSATFVVTISACS 328
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
+ G Q ++ ++ K+ LVD+ + G + AE+ + + +
Sbjct: 329 HSGLVDEGLQIFNS-MKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATL 387
Query: 412 LYNVMIAGYAHHGFENKAIQL 432
+ + + H FE I L
Sbjct: 388 WRSFLGSSQTHGDFERGEIAL 408
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 66/350 (18%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDT--VALDLFARM 64
F A++ Y L +AR+LF+ DL ++N++L+AYA ++ D+ L LF RM
Sbjct: 151 FVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
Q + +E++L ++ A L G H Y++K L++F +SLID+YSKCG
Sbjct: 211 Q-----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A VF D +S+ D +N +I G
Sbjct: 266 CLSFARKVF-------DEMSQ--------------------------RDVSCYNAMIRGL 292
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT-------GLKCLKLGKCVHALVLK 237
+G+ + + L+ +I +G+ + T +SAC+ GL+ K V+ + K
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 238 ND--GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT--SSLIAGYSSKGNMTK 293
+ GC +VD + G + AE + +K P AT S + + G+ +
Sbjct: 353 VEHYGC--------LVDLLGRSGRLEEAEECIKKMPVK-PNATLWRSFLGSSQTHGDFER 403
Query: 294 AKRLFDSL------SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
+ L + NYV+ + + +G + E +L ++ R ++
Sbjct: 404 GEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKS 453
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 251 VDFYCKCGNMRYAESVYA---GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
++ KC +++ + ++A IG+ S + SS ++ A + + +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVF 72
Query: 308 VWTALCSGYV---KSQQCEAVFKLFREFRTTEA--LIPDTMIIVNVLGACAIQATLSL-G 361
++ L S V S Q F L+ + ++ + + P+ ++ A A G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 362 KQTHAYILR--TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAG 419
+ HA++L+ +N D + +ALV Y+ CG + A F+ + + D+ +N ++A
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREP--DLATWNTLLAA 190
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
YA+ + ++ +++ ++P+ ++ VAL+ +C + G
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLG 230
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 256/516 (49%), Gaps = 47/516 (9%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I AY K N A +F A D+VS+N+++ A A ++ AL LF M
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN-PLKALKLFVSM--PEH 310
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
++ T ++L +S+ ++++ G+Q+H ++K + ++LID Y+KCG+ ++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
F D + D + V WN L++GY N
Sbjct: 371 RLCF---DYIRD------------------------------KNIVCWNALLSGYA-NKD 396
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
L+LF++M++ G ++T ++ L +C C+ + +H+++++ N +V S
Sbjct: 397 GPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSS 452
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAG-YSSKGNMTKAKRLFDSLSERNYVV 308
++ Y K M A + + +++AG YS +G ++ +L +L + + V
Sbjct: 453 LMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W + +S E V +LF+ + + PD V++L C+ L+LG H I
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHGLI 571
Query: 369 LRTKLN-MDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
+T + D + + L+DMY KCG+I K F+ ++++I + +I+ HG+
Sbjct: 572 TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE--ETREKNLITWTALISCLGIHGYGQ 629
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+A++ F+E L + KPD ++F+++L+ACRH G+V+ G F MK DY V PE+ HY C
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCA 688
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNAC 523
VD+ R L++A +R++P DA +W FL+ C
Sbjct: 689 VDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 205/525 (39%), Gaps = 115/525 (21%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+AF ++ Y + L A +F+ + L ++N M+S G G + F +
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL-GHRGFLKECMFFFREL 206
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
R + E + +L + ++ + KQ+H K D ++SLI Y KCG
Sbjct: 207 --VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCG 264
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
+ A +F W D VSWN +I
Sbjct: 265 NTHMAERMFQDAGS---------------------------W------DIVSWNAIICAT 291
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
++ +AL LF+ M E G NQ T SVL + ++ L G+ +H +++KN GC
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETG 350
Query: 245 FV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
V + ++DFY KCGN+ ++ FD + +
Sbjct: 351 IVLGNALIDFYAKCGNLE-------------------------------DSRLCFDYIRD 379
Query: 304 RNYVVWTALCSGYVKSQQ--CEAVF--KLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+N V W AL SGY C ++F L FR TE L +C +
Sbjct: 380 KNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTE------YTFSTALKSCCVTEL-- 431
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCG---------------------NIA---- 394
+Q H+ I+R ++ + S+L+ Y+K NI
Sbjct: 432 --QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIY 489
Query: 395 -----YAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
Y E + T D + +N+ IA + + + I+LF+ ML+ +++PD TFV
Sbjct: 490 SRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFV 549
Query: 450 ALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGR 493
++LS C + LG + K D++ + + ++DMYG+
Sbjct: 550 SILSLCSKLCDLTLGSSIHGLITKTDFSC-ADTFVCNVLIDMYGK 593
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 187/453 (41%), Gaps = 86/453 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N II Y K ++ A +FD R+ VS+N+++ Y+ D A +F+ M+
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDK-AWGVFSEMR---- 107
Query: 70 TIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
G ++ T++ +L+ A L V G Q+H +K
Sbjct: 108 YFGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLK------------------------ 141
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAAC--CRDGKMD---MALNVFWKNPEFNDTVSWNTLIA 182
Y +F +A V C C G++D MA VF P F +WN +++
Sbjct: 142 --YGLFMA----------DAFVGTCLLCLYGRLDLLEMAEQVFEDMP-FKSLETWNHMMS 188
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
G+++ + F E++ G + + VL + +K L + K +H K
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
V + ++ Y KCGN AE ++ G + +++I + N KA +LF S+
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E + P+ V+VLG ++ LS G+
Sbjct: 309 EHGFS--------------------------------PNQGTYVSVLGVSSLVQLLSCGR 336
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
Q H +++ L +AL+D Y+KCGN+ + F + D++++ +N +++GYA+
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI--RDKNIVCWNALLSGYAN 394
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
+ LF +ML++ +P TF L +C
Sbjct: 395 KD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 46/316 (14%)
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
G++ +A VF + PE N VS+NT+I GY + G +++A +F EM G NQ T++ +
Sbjct: 63 GEVSLAGKVFDQMPERNK-VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGL 121
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
LS C L ++ G +H L LK G+ +
Sbjct: 122 LS-CASLD-VRAGTQLHGLSLK------------------------------YGLFMADA 149
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS-----GYVKSQQCEAVFKLFR 330
F + L+ Y + A+++F+ + ++ W + S G++K E +F FR
Sbjct: 150 FVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK----ECMF-FFR 204
Query: 331 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
E A + ++ + VL + L + KQ H + L+ + + ++L+ Y KC
Sbjct: 205 ELVRMGASLTESSFL-GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKC 263
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
GN AE+ FQ D++ +N +I A KA++LF M + P+ T+V+
Sbjct: 264 GNTHMAERMFQ--DAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS 321
Query: 451 LLSACRHRGLVELGEK 466
+L L+ G +
Sbjct: 322 VLGVSSLVQLLSCGRQ 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 272 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 331
++ + +++I+ Y G ++ A ++FD + ERN V + + GY K + + +F E
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 332 FRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM-DEKLASALVDMYSKC 390
R +P+ + +L ++ + G Q H L+ L M D + + L+ +Y +
Sbjct: 106 MRYF-GYLPNQSTVSGLLSCASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRL 162
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
+ AE+ F+ + + +N M++ H GF + + F+E++++ +F+
Sbjct: 163 DLLEMAEQVFEDMPFKSLET--WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG 220
Query: 451 LL 452
+L
Sbjct: 221 VL 222
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 345 IVNVLGACAIQATLSLGKQTHAY--ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
+V++L C + + K HA L + L + + ++ +Y K G ++ A K F
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ +R+ + +N +I GY+ +G +KA +F EM P+ T LLS C +
Sbjct: 75 M--PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLDVRA 131
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 510
+ +S+K + + + C++ +YGR + LE A + +P +
Sbjct: 132 GTQLHGLSLKYGL-FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 241/516 (46%), Gaps = 78/516 (15%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
DE T ++ + + V G +H +++ D +S +D Y KC A VF
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 134 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 193
G+M PE N VSW L+ YV++G +E A
Sbjct: 169 ----------------------GEM----------PERN-AVSWTALVVAYVKSGELEEA 195
Query: 194 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
++F M E+ N G N +VD
Sbjct: 196 KSMFDLMPER----------------------------------NLGSWN-----ALVDG 216
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
K G++ A+ ++ + + + +S+I GY+ G+M A+ LF+ + W+AL
Sbjct: 217 LVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALI 276
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
GY ++ Q FK+F E + + PD I+V ++ AC+ L ++ +Y L ++
Sbjct: 277 LGYAQNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY-LHQRM 334
Query: 374 NM--DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQ 431
N + AL+DM +KCG++ A K F+ + RD++ Y M+ G A HG ++AI+
Sbjct: 335 NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ--RDLVSYCSMMEGMAIHGCGSEAIR 392
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
LF++M+ + PD + F +L C LVE G ++F M++ Y++L HY+C+V++
Sbjct: 393 LFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLL 452
Query: 492 GRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYV 551
R +L++A E ++ +P + AS WG+ L C ++ NT + + L ++E + YV
Sbjct: 453 SRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYV 512
Query: 552 QLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
L+N+YAA +W ++ +R +M TK+ G SWI
Sbjct: 513 LLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 155/346 (44%), Gaps = 44/346 (12%)
Query: 164 VFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI-EYNQHTLASVLSACTGL 222
VF + P T WN LI GY +++ + M+ G+ +++T V+ C+
Sbjct: 65 VFERVPS-PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 282
+++G VH LVL+ + V + VDFY KC ++ A V+ + ++ + ++L+
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 283 AGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
Y G + +AK +FD + ERN W AL G VKS KLF E +P
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDE-------MPKR 236
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
II +Y ++++D Y+K G++ A F+
Sbjct: 237 DII--------------------SY-------------TSMIDGYAKGGDMVSARDLFEE 263
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
DV ++ +I GYA +G N+A ++F EM ++KPD V L+SAC G E
Sbjct: 264 ARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
L EK + + N Y ++DM + +++A + ++P
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 143/319 (44%), Gaps = 50/319 (15%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTV-ALD 59
MP RN SWNA++ +K+ +L A+ LFD RD++SY SM+ Y A G D V A D
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGY--AKGGDMVSARD 259
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
LF + AR G+D + ++ A+ ++ S M +F + L+
Sbjct: 260 LF---EEAR---GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA 313
Query: 120 YSKCGSFR----------EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP 169
S+ G F + N FS V L+ NA + G MD A +F + P
Sbjct: 314 CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA------KCGHMDRAAKLFEEMP 367
Query: 170 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSAC-------TGL 222
+ D VS+ +++ G +G A+ LF +M+++GI ++ +L C GL
Sbjct: 368 Q-RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS-PF----- 276
+ +L + ++++ D S IV+ + G ++ A + IKS PF
Sbjct: 427 RYFELMRKKYSILASPDH------YSCIVNLLSRTGKLKEAYEL-----IKSMPFEAHAS 475
Query: 277 ATSSLIAGYSSKGNMTKAK 295
A SL+ G S GN A+
Sbjct: 476 AWGSLLGGCSLHGNTEIAE 494
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 297 LFDSLSERNYVVWTALCSGYV-KSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
+F+ + +W L GY K E V L R RT A PD V+ C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLAR-PDEYTFPLVMKVCSNN 123
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+ +G H +LR + D + ++ VD Y KC ++ A K F + +R+ + +
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP--ERNAVSWTA 181
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
++ Y G +A +F M + +L ++ AL+ GLV+ G+ ++ K+ +
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVD-----GLVKSGD--LVNAKKLF 230
Query: 476 NVLP--EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFL 520
+ +P +I Y M+D Y +G + A + + +D W A +
Sbjct: 231 DEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR-GVDVRAWSALI 276
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 274/586 (46%), Gaps = 86/586 (14%)
Query: 10 NAIIMAYIKAHNLTQARALFDSA--SHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
NA+I Y + A +F+ + RD V++N ++ AG ++ L +F +M A
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES--LLVFRKMLEA 285
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
++ ++T +++ G Q+H +KT + ++ + MYS F
Sbjct: 286 --SLRPTDLTFVSVM---GSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A+ VF ++ E D V+WNT+I+ Y Q
Sbjct: 341 AAHKVF---------------------------------ESLEEKDLVTWNTMISSYNQA 367
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
+ A++++ M G++ ++ T S+L+ L L++ V A ++K
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIK---------- 414
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATS-SLIAGYSSKGNMTKAKRLFDSLSERNY 306
G+ S S +LI+ YS G + KA LF+ +N
Sbjct: 415 ----------------------FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEA-LIPDTMIIVNVLGACAIQATLSLGKQTH 365
+ W A+ SG+ + + F +E ++PD + +L C ++L LG QTH
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGF 425
AY+LR + + +AL++MYS+CG I + + F + S++DV+ +N +I+ Y+ HG
Sbjct: 513 AYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM--SEKDVVSWNSLISAYSRHGE 570
Query: 426 ENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
A+ ++ M + + PDA TF A+LSAC H GLVE G + F SM E + V+ + H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDAS---IWGAFLNACKINNNTTLVKQAEEELLK 541
+C+VD+ GR L++A E + KI + S +W A +AC + + L K + L++
Sbjct: 631 SCLVDLLGRAGHLDEA-ESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
Query: 542 VEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
E D+ S YVQL+N+YA G W E R+ + A K GCSW+
Sbjct: 690 KEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 222/476 (46%), Gaps = 59/476 (12%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
AL LFA + T+ D+ +++ + + LR +G Q+H Y +++ ++L
Sbjct: 40 ALKLFADVHRC-TTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTL 98
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS 176
+ +Y + G+ F D D+ S +++A + G ++ A VF K PE +D
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEP-DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI 157
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN +I G ++GY E ++ LF EM + G+ +++ A++LS C L GK VH+LV+
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVI 216
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K + F++S +V+ +LI Y + + A
Sbjct: 217 K----AGFFIASSVVN---------------------------ALITMYFNCQVVVDACL 245
Query: 297 LFDS--LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 354
+F+ ++ R+ V + + G ++ E++ +FR+ +L P + V+V+G+C+
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEA-SLRPTDLTFVSVMGSCSC 303
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
A +G Q H ++T +++A + MYS + A K F+ + ++D++ +N
Sbjct: 304 AA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL--EEKDLVTWN 358
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE----KFFMS 470
MI+ Y A+ +++ M I +KPD TF +LL+ ++E+ + KF +S
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLS 418
Query: 471 MKEDYNVLPEIYHYACMVDMYGRGNQLEKA----VEFMRKIPIQIDASIWGAFLNA 522
K + + ++ Y + Q+EKA +RK I +A I G + N
Sbjct: 419 SKIEIS--------NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG 466
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 230/522 (44%), Gaps = 83/522 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVS-YNSMLSAYAGADGCDTVALDLFAR 63
+ +SW ++ A K ++ A +FD RD V+ +N+M++ G +++LF
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFRE 180
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M + + D+ T+L++ + +GKQ+HS ++K ++ +++LI MY C
Sbjct: 181 MH--KLGVRHDKFGFATILSM-CDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC 237
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
+V AC + D+A+ D V++N +I G
Sbjct: 238 ----------------------QVVVDACLVFEETDVAV---------RDQVTFNVVIDG 266
Query: 184 YVQNGY-MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
G+ + +L +F +M+E + T SV+ +C+ C +G VH L +K
Sbjct: 267 LA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKT---- 317
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
G +Y +++ + YSS + A ++F+SL
Sbjct: 318 ---------------GYEKYT------------LVSNATMTMYSSFEDFGAAHKVFESLE 350
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
E++ V W + S Y +++ ++ +++ + PD ++L A L + +
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLL---ATSLDLDVLE 406
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAH 422
A I++ L+ ++++AL+ YSK G I A+ F+ +++I +N +I+G+ H
Sbjct: 407 MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE--RSLRKNLISWNAIISGFYH 464
Query: 423 HGFENKAIQLFQEML--KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
+GF + ++ F +L ++ + PDA T LLS C + LG + + + E
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKE 523
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
+++MY + ++ ++E ++ + D W + ++A
Sbjct: 524 TLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISA 564
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
N + G ++G AL LF ++ + +Q++++ ++ L+ G VH +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
++ + VS+ ++ Y + GN+ + + I ++ ++L++ G++ A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 297 LFDSLSERNYV-VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
+FD + ER+ V +W A+ +G +S E +LFRE + D +L C
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFATILSMCDY- 202
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
+L GKQ H+ +++ + + +AL+ MY C + A F+ + RD + +NV
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 416 MIAGYAHHGFE-NKAIQLFQEMLKISLKPDAITFVALLSAC 455
+I G A GF+ ++++ +F++ML+ SL+P +TFV+++ +C
Sbjct: 263 VIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMII-VNVLGACAIQATLSLGKQTHAYILRTK 372
+G +S + KLF + L PD + + + A ++ T+ G Q H Y +R+
Sbjct: 29 TGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTI-FGGQVHCYAIRSG 87
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD------------------------- 407
L +++ L+ +Y + GN+A +K F + + D
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 408 -----RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
DV ++N MI G G+ +++LF+EM K+ ++ D F +LS C + G ++
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLD 206
Query: 463 LGEK 466
G++
Sbjct: 207 FGKQ 210
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/602 (26%), Positives = 287/602 (47%), Gaps = 76/602 (12%)
Query: 16 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM-- 73
Y + + A + +S+ +D+ + S++S + A+ F M+S +G+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE-AVGTFLEMRS----LGLQP 323
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC-GSFREAYNV 132
+ T + +L+L + +R + +GKQ+HS +K + S ++L+DMY KC S EA V
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 133 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 192
F AMV+ + VSW TLI G V +G+++
Sbjct: 384 F------------GAMVSP---------------------NVVSWTTLILGLVDHGFVQD 410
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
L +EM+++ +E N TL+ VL AC+ L+ ++ +HA +L+ V + +VD
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 253 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
Y + YA +V S+ R+ + +T+L
Sbjct: 471 AYASSRKVDYAWNV-------------------------------IRSMKRRDNITYTSL 499
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
+ + + + E + + + + D + + + A A L GK H Y +++
Sbjct: 500 VTRFNELGKHEMALSVI-NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG 558
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
+ + ++LVDMYSKCG++ A+K F+ + DV+ +N +++G A +GF + A+
Sbjct: 559 FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP--DVVSWNGLVSGLASNGFISSALSA 616
Query: 433 FQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYG 492
F+EM +PD++TF+ LLSAC + L +LG ++F MK+ YN+ P++ HY +V + G
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILG 676
Query: 493 RGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQ 552
R +LE+A + + ++ +A I+ L AC+ N +L + + L + + + Y+
Sbjct: 677 RAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYIL 736
Query: 553 LANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSH-SKADAIYS 611
LA++Y GK + R M K +K G S + V+ +H F S D + K + IY+
Sbjct: 737 LADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYA 796
Query: 612 TL 613
+
Sbjct: 797 EI 798
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 206/458 (44%), Gaps = 74/458 (16%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N ++ Y+K + AR LFD SHR + ++ M+SA+ + + AL LF M ++
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFAS-ALSLFEEMMAS-- 118
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+E T ++++ A LR + YG ++H ++KT + + SSL D+YSKCG F+EA
Sbjct: 119 GTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEA 178
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+FS +NA DT+SW +I+ V
Sbjct: 179 CELFSSL--------QNA-------------------------DTISWTMMISSLVGARK 205
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
AL + EM++ G+ N+ T +L A + L L+ GK +H+ ++ N + +
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTS 264
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVW 309
+VDF YS M A R+ +S E++ +W
Sbjct: 265 LVDF-------------------------------YSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 310 TALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL 369
T++ SG+V++ + + F E R+ L P+ +L C+ +L GKQ H+ +
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 370 RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ + +ALVDMY KC + + E S +V+ + +I G HGF
Sbjct: 353 KVGFEDSTDVGNALVDMYMKC-SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDC 411
Query: 430 IQLFQEMLKISLKPDAITFVALLSAC---RH-RGLVEL 463
L EM+K ++P+ +T +L AC RH R ++E+
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/608 (22%), Positives = 253/608 (41%), Gaps = 84/608 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFD----SASHRDLVSYNSMLSAYAGA------ 50
M HR F+W +I A+ K+ A +LF+ S +H + +++S++ + AG
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 51 ------------DGCDTV----------------ALDLFARMQSARDTIGMDEITLTTML 82
+G V A +LF+ +Q+A D I+ T M+
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA------DTISWTMMI 197
Query: 83 NLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG-SFREAYNVFSGCDGV-V 140
+ R Q +S MVK ++F L+ S G F + + G+ +
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
++V K ++V + KM+ A+ V + E D W ++++G+V+N + A+ F+EM
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
G++ N T +++LS C+ ++ L GK +H+ +K + V + +VD Y KC
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC--- 373
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
+ +A R+F ++ N V WT L G V
Sbjct: 374 ---------------------------SASEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA 380
+ F L E E + P+ + + VL AC+ + + HAY+LR ++ + +
Sbjct: 407 FVQDCFGLLMEMVKRE-VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
++LVD Y+ + YA + + RD I Y ++ + G A+ + M
Sbjct: 466 NSLVDAYASSRKVDYAWNVIR--SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
++ D ++ +SA + G +E G+ S+K ++ + + +VDMY + LE
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN--SLVDMYSKCGSLED 581
Query: 500 AVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAA 559
A + +I D W ++ N + A EE+ E + S + +
Sbjct: 582 AKKVFEEIATP-DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 560 EGKWNEMG 567
G+ ++G
Sbjct: 641 NGRLTDLG 648
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
++L++ Y + A++LFD +S R WT + S + KSQ+ + LF E +
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMAS-GT 120
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
P+ +V+ +CA +S G + H +++T + + S+L D+YSKCG A +
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE 180
Query: 399 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
F + ++ D I + +MI+ +A+Q + EM+K + P+ TFV LL A
Sbjct: 181 LFSSLQNA--DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGA 518
GL E G+ ++ + + +VD Y + +++E AV + Q D +W +
Sbjct: 239 GL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ-DVFLWTS 295
Query: 519 FLNA 522
++
Sbjct: 296 VVSG 299
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 215/420 (51%), Gaps = 16/420 (3%)
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEK-GIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
+S ++ Y G E+AL LF++M + + H + L +C LG VHA
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
+K++ SN FV ++D Y KC ++ +A ++ I ++ +++I+ Y+ G + +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 294 AKRLFDSLS-ERNYVVWTALCSGYVKSQ----QCEAVFKLFREFRTTEALIPDTMIIVNV 348
A L++++ N + A+ G V ++ + ++ EFR P+ + ++ +
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR----FKPNLITLLAL 188
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS-- 406
+ AC+ L K+ H+Y R + +L S LV+ Y +CG+I Y QLV DS
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYV----QLVFDSME 244
Query: 407 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
DRDV+ ++ +I+ YA HG A++ FQEM + PD I F+ +L AC H GL +
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKIN 526
+F M+ DY + HY+C+VD+ R + E+A + ++ +P + A WGA L AC+
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 527 NNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
L + A ELL VE +N + YV L +Y + G+ E R+R +M+ PG SW
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 209/494 (42%), Gaps = 89/494 (18%)
Query: 37 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 96
L+S LS+YA G AL+LF +M S+ + +D + L A G
Sbjct: 12 LISLTKQLSSYAN-QGNHEQALNLFLQMHSSF-ALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 97 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 156
+H++ VK+ + F +L+DMY KC S A +F + V NAM++ G
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQ-RNAVVWNAMISHYTHCG 128
Query: 157 KMDMALNVFWKNPEFNDTVSWNTLIAGYV--QNGYMERALTLFIEMIEKGIEYNQHTLAS 214
K+ A+ ++ + S+N +I G V ++G RA+ + +MIE + N TL +
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLA 187
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
++SAC+ + +L K +H+ +N + + SG+V+ Y +CG++ Y + V+ + +
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 275 PFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
A SSLI+ Y+ G+ E+ K F+E
Sbjct: 248 VVAWSSLISAYALHGD-------------------------------AESALKTFQEMEL 276
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK----LNMDEKLASALVDMYSKC 390
+ + PD + +NVL AC + L + Y R + L + S LVD+ S+
Sbjct: 277 AK-VTPDDIAFLNVLKAC---SHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRV 332
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G A K Q + + KP A T+ A
Sbjct: 333 GRFEEAYKVIQAMPE------------------------------------KPTAKTWGA 356
Query: 451 LLSACRHRGLVELGEKFFMSMKEDYNVLPE-IYHYACMVDMY---GRGNQLEKAVEFMRK 506
LL ACR+ G +EL E ++ +E V PE +Y + +Y GR + E+ M++
Sbjct: 357 LLGACRNYGEIELAE---IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKE 413
Query: 507 IPIQIDA-SIWGAF 519
+++ S W F
Sbjct: 414 SGVKVSPGSSWCLF 427
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSAS-HRDLVSYNSMLSAYAGADGCDTVALD 59
+P RNA WNA+I Y + +A L+++ + S+N+++ G + A++
Sbjct: 109 IPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIE 168
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
+ +M R + ITL +++ + + K++HSY + + S L++
Sbjct: 169 FYRKMIEFRFKPNL--ITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y +CGS VF D + D D V+W++
Sbjct: 227 YGRCGSIVYVQLVF---DSMED------------------------------RDVVAWSS 253
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
LI+ Y +G E AL F EM + + +VL AC+
Sbjct: 254 LISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACS 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
PH S ++ AY + ++ + +FDS RD+V+++S++SAYA G AL F
Sbjct: 215 PHPQLKS--GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYA-LHGDAESALKTF 271
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKL----RVVCYGKQMHS-YMVKTANDLSKFALSSL 116
M+ A+ T D+I +L + + Y K+M Y ++ + D S L
Sbjct: 272 QEMELAKVT--PDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD----HYSCL 325
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA-------LNVFWKNP 169
+D+ S+ G F EAY V + A++ AC G++++A L V +NP
Sbjct: 326 VDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP 385
Query: 170 EFNDTVSWNTLIAG--YVQNGYMERALTLFIEMIEKGIE 206
N ++ G Y+ G E A L ++M E G++
Sbjct: 386 A-------NYVLLGKIYMSVGRQEEAERLRLKMKESGVK 417
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 226/443 (51%), Gaps = 10/443 (2%)
Query: 149 VAACCRDGKMDMALNVF--WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
++ C D A VF +NP + + +N +I Y G +L+ F M +GI
Sbjct: 43 ISICGSLSNSDYANRVFSHIQNP---NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIW 99
Query: 207 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESV 266
+++T A +L +C+ L L+ GKCVH +++ + G+V+ Y G M A+ V
Sbjct: 100 ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKV 159
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVF 326
+ + ++ + +I G+ G++ + LF +SER+ V W ++ S K +
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREAL 219
Query: 327 KLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD-EKLASALVD 385
+LF E + PD +V VL A L GK H+ + L D + +ALVD
Sbjct: 220 ELFCEM-IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 386 MYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS-LKPD 444
Y K G++ A F+ + R+V+ +N +I+G A +G I LF M++ + P+
Sbjct: 279 FYCKSGDLEAATAIFRKM--QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPN 336
Query: 445 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 504
TF+ +L+ C + G VE GE+ F M E + + HY MVD+ R ++ +A +F+
Sbjct: 337 EATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFL 396
Query: 505 RKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWN 564
+ +P+ +A++WG+ L+AC+ + + L + A EL+K+E N YV L+N+YA EG+W
Sbjct: 397 KNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQ 456
Query: 565 EMGRIRKEMRGKEATKLPGCSWI 587
++ ++R M+ K G S I
Sbjct: 457 DVEKVRTLMKKNRLRKSTGQSTI 479
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 44/357 (12%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M RN WN +I + + ++ + LF S R +VS+NSM+S+ + G D AL+L
Sbjct: 163 MSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC-GRDREALEL 221
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M DE T+ T+L +SA L V+ GK +HS TA
Sbjct: 222 FCEMID--QGFDPDEATVVTVLPISASLGVLDTGKWIHS----TAES------------- 262
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
G F++ V NA+V C+ G ++ A +F K N VSWNTL
Sbjct: 263 --SGLFKDFITV------------GNALVDFYCKSGDLEAATAIFRKMQRRN-VVSWNTL 307
Query: 181 IAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
I+G NG E + LF MIE+G + N+ T VL+ C+ ++ G+ + L+++
Sbjct: 308 ISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF 367
Query: 240 GCSNQFVSSG-IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRL 297
+ G +VD + G + A + + + A SL++ S G++ A+
Sbjct: 368 KLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVA 427
Query: 298 ------FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
+ + NYV+ + L + + Q E V L ++ R ++ T+ V+V
Sbjct: 428 AMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTICDVSV 484
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 212/412 (51%), Gaps = 36/412 (8%)
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
WN ++ Y+++ A+ +++ M+ + ++++L V+ A + LGK +H++ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
+ ++F SG + YCK G A++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFE-------------------------------NARK 173
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+FD ER W A+ G + + ++F + + + L PD +V+V +C
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEPDDFTMVSVTASCGGLG 232
Query: 357 TLSLGKQTHAYIL--RTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
LSL Q H +L +T+ D + ++L+DMY KCG + A F+ + R+V+ ++
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM--RQRNVVSWS 290
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
MI GYA +G +A++ F++M + ++P+ ITFV +LSAC H GLVE G+ +F MK +
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQ 534
+ + P + HY C+VD+ R QL++A + + ++P++ + +WG + C+ + + +
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 535 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSW 586
++++E N YV LANVYA G W ++ R+RK M+ K+ K+P S+
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 176/422 (41%), Gaps = 72/422 (17%)
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R T+ D +L ++ + ++ GK++HS V+ +F S I +Y K G F
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A VF +NPE SWN +I G
Sbjct: 170 NARK--------------------------------VFDENPE-RKLGSWNAIIGGLNHA 196
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL--KNDGCSNQF 245
G A+ +F++M G+E + T+ SV ++C GL L L +H VL K + S+
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERN 305
+ + ++D Y KCG M A ++ + ++ + SS+I GY++ GN +A
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA----------- 305
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
+C F+ REF + P+ + V VL AC + GK T+
Sbjct: 306 --------------LEC---FRQMREF----GVRPNKITFVGVLSACVHGGLVEEGK-TY 343
Query: 366 AYILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
+++++ ++ L+ +VD+ S+ G + A+K + + +V+++ ++ G
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP-MKPNVMVWGCLMGGCEKF 402
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G A + M+++ D + +V L + RG+ + E+ MK Y
Sbjct: 403 GDVEMAEWVAPYMVELEPWNDGV-YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Query: 484 YA 485
YA
Sbjct: 462 YA 463
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 55/281 (19%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F + I Y KA AR +FD R L S+N+++ A G A+++F M
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA-GRANEAVEMFVDM 209
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMV--KTANDLSKFALSSLIDMYSK 122
+ R + D+ T+ ++ L + Q+H ++ KT L+SLIDMY K
Sbjct: 210 K--RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGK 267
Query: 123 CGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIA 182
C G+MD+A ++F + + N VSW+++I
Sbjct: 268 C--------------------------------GRMDLASHIFEEMRQRN-VVSWSSMIV 294
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV------- 235
GY NG AL F +M E G+ N+ T VLSAC ++ GK A++
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 236 --LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
L + GC IVD + G ++ A+ V + +K
Sbjct: 355 PGLSHYGC--------IVDLLSRDGQLKEAKKVVEEMPMKP 387
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 308 VWTALCSGYVKSQ-QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA 366
+W + Y++ + +A+ R+T ++PD + V+ A +LGK+ H+
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRST--VLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 367 YILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFE 426
+R DE S + +Y K G A K F + +R + +N +I G H G
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFD--ENPERKLGSWNAIIGGLNHAGRA 199
Query: 427 NKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS---MKEDYNVLPEIYH 483
N+A+++F +M + L+PD T V++ ++C GL +L F + ++ +I
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASC--GGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNT 529
++DMYG+ +++ A ++ Q + W + + N NT
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNT 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N++I Y K + A +F+ R++VS++SM+ YA A+G AL+ F +M+
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA-ANGNTLEALECFRQMREF-- 315
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS---LIDMYSKCGSF 126
+ ++IT +L+ +V GK + M+K+ +L LS ++D+ S+ G
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEP-GLSHYGCIVDLLSRDGQL 373
Query: 127 REAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ 186
+EA V +++ ++ C + G ++MA W P + WN + +
Sbjct: 374 KEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE---WVAPYMVELEPWNDGVYVVLA 430
Query: 187 NGYMERALTLFIEMIEK 203
N Y R + +E + K
Sbjct: 431 NVYALRGMWKDVERVRK 447
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 184/326 (56%), Gaps = 5/326 (1%)
Query: 294 AKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
AK++ + S++N + W + GYV++ Q E K + + + P+ + L ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILY 413
L K H+ ++ + + ++ L+SALVD+Y+KCG+I + + F V +D V ++
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND--VSIW 234
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
N MI G+A HG +AI++F EM + PD+ITF+ LL+ C H GL+E G+++F M
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVK 533
+++ P++ HY MVD+ GR ++++A E + +PI+ D IW + L++ + N L +
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
A + L K ++ + YV L+N+Y++ KW ++R+ M + K G SW+ I
Sbjct: 355 IAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMI 411
Query: 594 HVFTSGDTSHSKADAIYSTLVCLYGK 619
H F +GDTSH + AIY L L K
Sbjct: 412 HRFKAGDTSHIETKAIYKVLEGLIQK 437
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 161/398 (40%), Gaps = 84/398 (21%)
Query: 96 QMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF----SGCDGVVDLVSKNAMVAA 151
Q H+ + K L S + Y +C A + S GV ++ N ++ +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNI---NLIIES 107
Query: 152 CCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE-KGIEYNQH 210
+ G+ +A V +N + ++WN +I GYV+N E AL M+ I+ N+
Sbjct: 108 LMKIGESGLAKKVL-RNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKF 166
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
+ AS L+AC L L K VH+L++ + N +SS +VD Y KCG++ + V+
Sbjct: 167 SFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF--- 223
Query: 271 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 330
YS K N + +W A+ +G+ ++F
Sbjct: 224 --------------YSVKRN--------------DVSIWNAMITGFATHGLATEAIRVFS 255
Query: 331 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA--SALVDMYS 388
E E + PD++ + +L C+ L GK+ + R + ++ KL A+VD+
Sbjct: 256 EME-AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR-RFSIQPKLEHYGAMVDLLG 313
Query: 389 KCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITF 448
+ G + +A +L + M ++PD + +
Sbjct: 314 RAGRV---------------------------------KEAYELIESM---PIEPDVVIW 337
Query: 449 VALLSACRHRGLVELGEKFFMSMKE----DYNVLPEIY 482
+LLS+ R ELGE ++ + DY +L IY
Sbjct: 338 RSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIY 375
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 137/331 (41%), Gaps = 38/331 (11%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N II + +K A+ + +AS ++++++N M+ Y + AL M S D
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE-ALKALKNMLSFTD 160
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
I ++ + + L A+L + + K +HS M+ + +L+ S+L+D+Y+KCG +
Sbjct: 161 -IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF + ND WN +I G+ +G
Sbjct: 220 REVFYSV---------------------------------KRNDVSIWNAMITGFATHGL 246
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
A+ +F EM + + + T +L+ C+ L+ GK L+ + + G
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 250 -IVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+VD + G ++ A + + I+ SL++ + N + +LS+
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG 366
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEAL 338
+ L + Y +++ E+ K+ RE + E +
Sbjct: 367 DYVLLSNIYSSTKKWESAQKV-RELMSKEGI 396
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 265/567 (46%), Gaps = 76/567 (13%)
Query: 13 IMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIG 72
++A+ ++ A ++F+ S+ +L +N+M+ Y+ +D + A +F ++++ T
Sbjct: 66 LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPER-AFSVFNQLRAKGLT-- 122
Query: 73 MDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNV 132
+D + T L ++ V G+ +H + R + V
Sbjct: 123 LDRFSFITTLKSCSRELCVSIGEGLHGI------------------------ALRSGFMV 158
Query: 133 FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMER 192
F+ DL +NA++ C GK+ A VF + P+ D V+++TL+ GY+Q
Sbjct: 159 FT------DL--RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
AL LF M + + N TL S LSA + L L + H L +K
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIK--------------- 255
Query: 253 FYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTAL 312
G+ + T +LI Y G ++ A+R+FD ++ V W +
Sbjct: 256 ---------------IGLDLDLHLIT-ALIGMYGKTGGISSARRIFDCAIRKDVVTWNCM 299
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
Y K+ E L R+ + E + P++ V +L +CA +G+ + +
Sbjct: 300 IDQYAKTGLLEECVWLLRQMK-YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
+ +D L +ALVDMY+K G + A + F + D+DV + MI+GY HG +A+ L
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRM--KDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 433 FQEMLK--ISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
F +M + ++P+ ITF+ +L+AC H GLV G + F M E Y+ P++ HY C+VD+
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRY 550
GR QLE+A E +R +PI D++ W A L AC++ N L + L ++ + +
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA 536
Query: 551 VQLANVYAAEGKW-----NEMGRIRKE 572
+ LA +A G NE+ + RKE
Sbjct: 537 ILLAGTHAVAGNPEKSLDNELNKGRKE 563
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 48/357 (13%)
Query: 273 KSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREF 332
K FA S L+A +SS ++ A +F+ +S N ++ + GY S + E F +F +
Sbjct: 58 KDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL 116
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
R + L D + L +C+ + +S+G+ H LR+ + L +AL+ Y CG
Sbjct: 117 R-AKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK 175
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
I+ A K F + S D + ++ ++ GY + A+ LF+ M K + + T ++ L
Sbjct: 176 ISDARKVFDEMPQS-VDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 453 SACRHRG-----------LVELGEKFFMSMKE-------------------DYNVLPEIY 482
SA G +++G + + D + ++
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVV 294
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKI---PIQIDASIWGAFLNACKINN----NTTLVKQA 535
+ CM+D Y + LE+ V +R++ ++ ++S + L++C + T+
Sbjct: 295 TWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL 354
Query: 536 EEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENG 592
EEE + ++A G+ L ++YA G + I M+ K+ SW + +G
Sbjct: 355 EEERIALDAILGT---ALVDMYAKVGLLEKAVEIFNRMKDKDVK-----SWTAMISG 403
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 56/306 (18%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
A+I Y K ++ AR +FD A +D+V++N M+ YA G + L +M+ +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT-GLLEECVWLLRQMKYEK- 323
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ + T +L+ A G+ + + + L ++L+DMY+K G +A
Sbjct: 324 -MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
+F N M +D D SW +I+GY +G
Sbjct: 383 VEIF------------NRM-----KD----------------KDVKSWTAMISGYGAHGL 409
Query: 190 MERALTLFIEMIEKG--IEYNQHTLASVLSACT-------GLKCLKLGKCVHALVLKND- 239
A+TLF +M E+ + N+ T VL+AC+ G++C K ++ K +
Sbjct: 410 AREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEH 469
Query: 240 -GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS-PFATSSLIAGYSSKGNMTKAKRL 297
GC +VD + G + A + + I S A +L+A GN + +
Sbjct: 470 YGC--------VVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESV 521
Query: 298 FDSLSE 303
L+E
Sbjct: 522 MMRLAE 527
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+A A++ Y K L +A +F+ +D+ S+ +M+S Y GA G A+ LF +M
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGY-GAHGLAREAVTLFNKM 420
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKC 123
+ + +EIT +LN + +V G + MV+ + K ++D+ +
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT-LIA 182
G EAY + D + A++AAC G D+ +V + E +T + L+A
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 183 G-YVQNGYMERAL 194
G + G E++L
Sbjct: 541 GTHAVAGNPEKSL 553
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 202/351 (57%), Gaps = 20/351 (5%)
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSER-NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
+SL+ YSS G++ A+++FD E+ N V+WTA+ S Y +++ +LF+ E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA-EK 162
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK--LNMDEKLASALVDMYSKCGNIAY 395
+ D +I+ L ACA + +G++ ++ ++ K L MD L ++L++MY K G
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE--- 219
Query: 396 AEKSFQLVTDSDR-DVILYNVMIAGYAHHGFENKAIQLFQEMLKIS------LKPDAITF 448
EK+ +L +S R DV Y MI GYA +G ++++LF++M I + P+ +TF
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 449 VALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP 508
+ +L AC H GLVE G++ F SM DYN+ P H+ CMVD++ R L+ A EF+ ++P
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP 339
Query: 509 IQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGR 568
I+ + IW L AC ++ N L ++ + + +++ D+ YV L+N+YA++G W+E +
Sbjct: 340 IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK 399
Query: 569 IRKEMRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKA---DAIYSTLVCL 616
+R +R + ++PG SWI + + I+ F SG ++ + I L CL
Sbjct: 400 MRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCL 447
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 78/347 (22%)
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
G +D A VF + PE + V W +I+ Y +N A+ LF M + IE + +
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
LSAC L +++G+ +++ +K R A +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKR--------------------KRRLAMDLT-------- 205
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
+SL+ Y G KA++LFD ++ +T++ GY + Q + +LF++ +T
Sbjct: 206 -LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 336 E-----ALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKLASALVDMYSK 389
+ + P+ + + VL AC+ + GK+ + I+ L E +VD++ +
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 390 CGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
G++ A H F N ++ +KP+ + +
Sbjct: 325 SGHLKDA--------------------------HEFIN----------QMPIKPNTVIWR 348
Query: 450 ALLSACRHRGLVELGEKFFMSMKE-------DYNVLPEIYHYACMVD 489
LL AC G VELGE+ + E DY L IY M D
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWD 395
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
N+ + L SG + +A+ FR + + + ++ + + A +A+ G+Q
Sbjct: 32 NHTLKQYLESG----EPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQI 87
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
HA + + N ++ ++LV YS G++ YA + F T ++++L+ MI+ Y +
Sbjct: 88 HALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD-ETPEKQNIVLWTAMISAYTENE 146
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYH 483
+AI+LF+ M ++ D + LSAC G V++GE+ + S+K + ++
Sbjct: 147 NSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTL 206
Query: 484 YACMVDMYGRGNQLEKAV----EFMRKIPIQIDASIWGAFLNA 522
+++MY + + EKA E MRK + I+G LN
Sbjct: 207 RNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNG 249
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM----Q 65
N+++ Y+K+ +AR LFD + +D+ +Y SM+ YA +G +L+LF +M Q
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA-LNGQAQESLELFKKMKTIDQ 266
Query: 66 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFA-LSSLIDMYSKCG 124
S I +++T +L + +V GK+ M+ N + A ++D++ + G
Sbjct: 267 SQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSG 326
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV 164
++A+ + + V ++ AC G +++ V
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 214/421 (50%), Gaps = 8/421 (1%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
N + Y+ + ++AL + +++ G + +T S++S C+ GK H +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 238 NDGCSNQF-VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
+ GC V + ++ Y CG + A+ ++ I + + +S+IAG G++ A +
Sbjct: 147 H-GCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
LFD + ++N + W + S Y+ + LFRE + +V +L AC A
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGRSA 264
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
L G+ HA ++RT LN + +AL+DMY KC + A + F + S R+ + +NVM
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSL--SIRNKVTWNVM 322
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 476
I + HG ++LF+ M+ L+PD +TFV +L C GLV G+ ++ M +++
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 477 VLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDASIWGAFLNACKINNNTTLVK 533
+ P H CM ++Y E+A E ++ +P + +++ W L++ + N TL +
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 534 QAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGI 593
+ L++ + N Y L N+Y+ G+W ++ R+R+ ++ ++ ++PGC + ++ +
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Query: 594 H 594
H
Sbjct: 503 H 503
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 188/436 (43%), Gaps = 71/436 (16%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
D T ++++ K V GK H +K D +SL+ MY+ CG+ A +F
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 134 SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERA 193
D+VS N+++A R+G + A +F + P+ N +SWN +I+ Y+ +
Sbjct: 177 VEIPKR-DIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN-IISWNIMISAYLGANNPGVS 234
Query: 194 LTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
++LF EM+ G + N+ TL +L+AC LK G+ VHA +++ S+ + + ++D
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
Y KC +G+ A+R+FDSLS RN V W +
Sbjct: 295 YGKCKE----------VGL---------------------ARRIFDSLSIRNKVTWNVMI 323
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
+ + E +LF E L PD + V VL CA +S G+ ++ L
Sbjct: 324 LAHCLHGRPEGGLELF-EAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS------L 376
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 433
+DE FQ+ + + N+ Y+ GF +A +
Sbjct: 377 MVDE----------------------FQIKPNFGHQWCMANL----YSSAGFPEEAEEAL 410
Query: 434 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY-- 491
+ + + P++ + LLS+ R G LGE S+ E + + YH ++++Y
Sbjct: 411 KNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHL--LMNIYSV 468
Query: 492 -GRGNQLEKAVEFMRK 506
GR + + E +++
Sbjct: 469 TGRWEDVNRVREMVKE 484
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P R+ SWN+II ++ ++ A LFD ++++S+N M+SAY GA+ V++ L
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANN-PGVSISL 237
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M R +E TL +LN + + G+ +H+ +++T + S ++LIDMY
Sbjct: 238 FREM--VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF 165
KC A +F + + V+ N M+ A C G+ + L +F
Sbjct: 296 GKCKEVGLARRIFDSLS-IRNKVTWNVMILAHCLHGRPEGGLELF 339
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 10/397 (2%)
Query: 196 LFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
F+EM + + + HT V AC K L L K +H L+ S+ F + ++
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 254 YCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALC 313
Y + A ++ + + LI G + +A+ LFDS+ R+ V W +L
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
SGY + C KLF E L PD + IV+ L ACA GK H Y R +L
Sbjct: 222 SGYAQMNHCREAIKLFDEM-VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLF 433
+D LA+ LVD Y+KCG I A + F+L SD+ + +N MI G A HG + F
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELC--SDKTLFTWNAMITGLAMHGNGELTVDYF 338
Query: 434 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 493
++M+ +KPD +TF+++L C H GLV+ F M+ Y+V E+ HY CM D+ GR
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGR 398
Query: 494 GNQLEKAVEFMRKIPI----QIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSR 549
+E+A E + ++P + W L C+I+ N + ++A + + ++G
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV 458
Query: 550 YVQLANVYAAEGKWNEMGRIRKEM-RGKEATKLPGCS 585
Y + +YA +W E+ ++R+ + R K+ K G S
Sbjct: 459 YKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 77/397 (19%)
Query: 111 FALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE 170
F L++LI +YS A +F + D+V+ N ++ + ++ A +F P
Sbjct: 153 FTLNTLIRVYSLIAPIDSALQLFDE-NPQRDVVTYNVLIDGLVKAREIVRARELFDSMP- 210
Query: 171 FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKC 230
D VSWN+LI+GY Q + A+ LF EM+ G++ + + S LSAC + GK
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 231 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGN 290
+H + + F+++G+VDFY KCG + A ++ K+ F +++I G + GN
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
E FR+ + + PD + ++VL
Sbjct: 331 -------------------------------GELTVDYFRKM-VSSGIKPDGVTFISVLV 358
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
C +H+ ++ N+ +++ S + D +R++
Sbjct: 359 GC-----------SHSGLVDEARNLFDQMRS---------------------LYDVNREM 386
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELGEKFFM 469
Y M G +A ++ ++M K + + + LL CR G +E+ EK
Sbjct: 387 KHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAAN 446
Query: 470 SMK----EDYNVLPEIYHYACMVDMYGRGNQLEKAVE 502
+K ED V Y MV+MY + E+ V+
Sbjct: 447 RVKALSPEDGGV------YKVMVEMYANAERWEEVVK 477
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
P R+ ++N +I +KA + +AR LFDS RDLVS+NS++S YA + C A+ LF
Sbjct: 179 PQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE-AIKLF 237
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
M + + D + + + L+ A+ GK +H Y + + F + L+D Y+
Sbjct: 238 DEMVAL--GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYA 295
Query: 122 KCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK------NPEFNDTV 175
KCG A +F C L + NAM+ G ++ ++ F K P D V
Sbjct: 296 KCGFIDTAMEIFELCSDKT-LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP---DGV 351
Query: 176 SWNTLIAGYVQNGYMERALTLFIEM 200
++ +++ G +G ++ A LF +M
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQM 376
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/588 (25%), Positives = 272/588 (46%), Gaps = 81/588 (13%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ---- 65
N++I Y K R +FD HRD VSY S++++ DG A+ L M
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS-CCQDGLLYEAMKLIKEMYFYGF 144
Query: 66 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCG 124
+ + + L T + S+K+ + H+ ++ LS+ L+DMY K
Sbjct: 145 IPKSELVASLLALCTRMGSSSKV-----ARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
A++VF E + VSW +I+G
Sbjct: 200 DHAAAFHVFD---------------------------------QMEVKNEVSWTAMISGC 226
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK-CLKLGKCVHALVLKNDGCSN 243
V N E + LF M + + N+ TL SVL AC L L K +H ++ ++
Sbjct: 227 VANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD 286
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ +++ + YC+CGN+ + ++ LF++
Sbjct: 287 ERLTAAFMTMYCRCGNV-------------------------------SLSRVLFETSKV 315
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
R+ V+W+++ SGY ++ C V L + R E + +++ ++ ++ AC LS
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRK-EGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H+ IL+ L +AL+DMY+KCG+++ A + F +T+ +D++ ++ MI Y H
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE--KDLVSWSSMINAYGLH 432
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G ++A+++F+ M+K + D + F+A+LSAC H GLVE + F + Y++ + H
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEH 491
Query: 484 YACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV-KQAEEELLKV 542
YAC +++ GR +++ A E +P++ A IW + L+AC+ + + K EL+K
Sbjct: 492 YACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS 551
Query: 543 EADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVE 590
E DN + YV L+ ++ G ++ +R+ M+ ++ K G S I E
Sbjct: 552 EPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 39/461 (8%)
Query: 156 GKMDMALNVFW--KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLA 213
G + A+ +F P ND WN +I G+ + + A + + M+++ +
Sbjct: 51 GDLSFAVQIFRYIPKPLTND---WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 214 SVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
L+ LK C+ SS + +C+ N R G+
Sbjct: 108 DALTCSFTLK----------------ACARALCSSAMDQLHCQI-NRR-------GLSAD 143
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
S T+ L+ YS G++ A +LFD + R+ W AL +G V + +L++
Sbjct: 144 SLLCTT-LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 334 TTEALIPDTMIIVNVLGACAIQATLSLGKQT-HAYILRTKLNMDEKLASALVDMYSKCGN 392
T E + + +V LGAC+ + G+ H Y N + +++A +DMYSKCG
Sbjct: 203 T-EGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGF 256
Query: 393 IAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
+ A + F+ T + V+ +N MI G+A HG ++A+++F ++ +KPD ++++A L
Sbjct: 257 VDKAYQVFEQFT-GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 453 SACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQID 512
+ACRH GLVE G F +M V + HY C+VD+ R +L +A + + + + D
Sbjct: 316 TACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD 374
Query: 513 ASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKE 572
+W + L A +I ++ + + A E+ ++ +N +V L+NVYAA+G+W ++GR+R +
Sbjct: 375 PVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDD 434
Query: 573 MRGKEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
M K+ K+PG S+I + IH F + D SH + IY +
Sbjct: 435 MESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKI 475
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 12 IIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTI 71
++ AY K +L A LFD RD+ S+N++++ + + A++L+ RM++ + I
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA-SEAMELYKRMET--EGI 206
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQM-HSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
E+T+ L + L V G+ + H Y +ND + ++ IDMYSKCG +AY
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGY----SND-NVIVSNAAIDMYSKCGFVDKAY 261
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTLIAGYVQN 187
VF G +V+ N M+ G+ AL +F K N D VS+ +
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 188 GYMERALTLFIEMIEKGIEYN 208
G +E L++F M KG+E N
Sbjct: 322 GLVEYGLSVFNNMACKGVERN 342
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 208/413 (50%), Gaps = 6/413 (1%)
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL 236
+NTLI Y+ G + +L LF M+ ++ N T S++ A + G +H L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K + FV + V FY + G++ + ++ I A +SL+ G M A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE--ALIPDTMIIVNVLGACA- 353
F + + V WT + +G+ K +F E E + P+ V+VL +CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 354 -IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
Q + LGKQ H Y++ ++ + L +AL+DMY K G++ A F + D+ V
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--RDKKVCA 291
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMK 472
+N +I+ A +G +A+++F+ M + P+ IT +A+L+AC LV+LG + F S+
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 473 EDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV 532
+Y ++P HY C+VD+ GR L A F++ +P + DAS+ GA L ACKI+ NT L
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 533 KQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCS 585
++L+ ++ + +YV L+ A + W+E ++RK M K+P S
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 29 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM-QSARDTIGMDEITLTTMLNLSAK 87
F D+VS+ ++++ ++ G AL +F M Q+ R I +E T ++L+ A
Sbjct: 175 FQRMPVTDVVSWTTVINGFS-KKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 88 LRV--VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSK 145
+ GKQ+H Y++ L+ ++L+DMY K G A +F D +
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF---DQI------ 284
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
RD K+ +WN +I+ NG ++AL +F M +
Sbjct: 285 --------RDKKV----------------CAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 206 EYNQHTLASVLSACTGLKCLKLG 228
N TL ++L+AC K + LG
Sbjct: 321 HPNGITLLAILTACARSKLVDLG 343
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 217/452 (48%), Gaps = 42/452 (9%)
Query: 165 FWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEY-NQHTLASVLSACTGLK 223
F +P +D WN LI G+ + ++ + M+ + + T L +C +K
Sbjct: 65 FDSDPSTSD---WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 224 CLKLGKC--VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSL 281
+ KC +H V++ SG +D +SL
Sbjct: 122 --SIPKCLEIHGSVIR----------SGFLD---------------------DAIVATSL 148
Query: 282 IAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
+ YS+ G++ A ++FD + R+ V W + + +++ E + D
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-GNEGVCGD 207
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 401
+ +V +L +CA + L++G H + +++AL+DMY+KCG++ A F
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
+ RDV+ +N MI GY HG +AI F++M+ ++P+AITF+ LL C H+GLV
Sbjct: 268 GMRK--RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 462 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLN 521
+ G + F M +++ P + HY CMVD+YGR QLE ++E + D +W L
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 522 ACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKL 581
+CKI+ N L + A ++L+++EA N YV + ++Y+A +RK +R + +
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 582 PGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
PG SWI + + +H F D H ++ IYS L
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM 200
D + ++V +G +++A VF + P D VSWN +I + G +AL+++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMP-VRDLVSWNVMICCFSHVGLHNQALSMYKRM 199
Query: 201 IEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM 260
+G+ + +TL ++LS+C + L +G +H + S FVS+ ++D Y KCG++
Sbjct: 200 GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 261 RYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQ 320
A V+ G+ + +S+I GY G+ +A F +
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM------------------- 300
Query: 321 QCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDE--K 378
+ P+ + + +L C+ Q + G + H I+ ++ ++ K
Sbjct: 301 -------------VASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVK 346
Query: 379 LASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIA 418
+VD+Y + G + E S +++ S D +L+ ++
Sbjct: 347 HYGCMVDLYGRAGQL---ENSLEMIYASSCHEDPVLWRTLLG 385
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 163/403 (40%), Gaps = 77/403 (19%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+A +++ Y ++ A +FD RDLVS+N M+ ++ G AL ++ RM
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV-GLHNQALSMYKRM 199
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ + D TL +L+ A + + G +H + F ++LIDMY+KCG
Sbjct: 200 --GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCG 257
Query: 125 SFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGY 184
S A VF+G D ++WN++I GY
Sbjct: 258 SLENAIGVFNGMRK---------------------------------RDVLTWNSMIIGY 284
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+G+ A++ F +M+ G+ N T +L C+ +K G V + S+Q
Sbjct: 285 GVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG------VEHFEIMSSQ 338
Query: 245 FVSSG-------IVDFYCKCGNMRYA-ESVYAGIGIKSPFATSSLIAGYSSKGNM----T 292
F + +VD Y + G + + E +YA + P +L+ N+
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV 398
Query: 293 KAKRL--FDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
K+L ++ + +YV+ T++ S +Q ++ KL R + V G
Sbjct: 399 AMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHD-----------LQTVPG 447
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI 393
I+ +G Q H +++ D+K+ +YS+ G +
Sbjct: 448 WSWIE----IGDQVHKFVV------DDKMHPESAVIYSELGEV 480
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 192/348 (55%), Gaps = 2/348 (0%)
Query: 242 SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSL 301
S+ +V + +V Y GNM A V+ + ++P + +I G ++ G+ KA + +
Sbjct: 156 SHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKM 215
Query: 302 SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
R V WT + GY + + + LF +A+ P+ + I+ +L A L +
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMC 275
Query: 362 KQTHAYI-LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
HAY+ R + D ++ ++L+D Y+KCG I A K F + + ++++ + MI+ +
Sbjct: 276 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG-EKFFMSMKEDYNVLP 479
A HG +A+ +F++M ++ LKP+ +T +++L+AC H GL E +FF +M +Y + P
Sbjct: 336 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP 395
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEEL 539
++ HY C+VDM R +LE+A + +IPI+ A +W L AC + ++ L ++ +L
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 455
Query: 540 LKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
+++E +G YV ++N++ G++ + R RK+M + KLPG S +
Sbjct: 456 MELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP RN +WN +I + +A + +R +VS+ +++ YA D L L
Sbjct: 184 MPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAIL-L 242
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALS-SLIDM 119
F+RM A D I +EIT+ +L L + +H+Y+ K ++ SLID
Sbjct: 243 FSRM-VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 301
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y+KCG + A+ F +G+ ++ VSW T
Sbjct: 302 YAKCGCIQSAFKFFIEIP-----------------NGRKNL--------------VSWTT 330
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT--GLKCLKLGKCVHALV-- 235
+I+ + +G + A+++F +M G++ N+ T+ SVL+AC+ GL + + + +V
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 236 ------LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
+K+ GC +VD + G + AE + I I+ ++ G S
Sbjct: 391 YKITPDVKHYGC--------LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACS 440
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 254/535 (47%), Gaps = 49/535 (9%)
Query: 2 PHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
P F N I AY K + AR LF+ RD S+N++++A A +G +F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA-QNGVSDEVFRMF 150
Query: 62 ARMQSARDTIGMDEITLTTMLN---LSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
RM RD + E + +L L LR++ +Q+H +VK + +S++D
Sbjct: 151 RRMN--RDGVRATETSFAGVLKSCGLILDLRLL---RQLHCAVVKYGYSGNVDLETSIVD 205
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
+Y KC +A VF D +V NP VSWN
Sbjct: 206 VYGKCRVMSDARRVF---DEIV---------------------------NPS---DVSWN 232
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
++ Y++ G+ + A+ +F +M+E + HT++SV+ AC+ L++GK +HA+ +K
Sbjct: 233 VIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
++ VS+ + D Y KC + A V+ K + +S ++GY+ G +A+ LF
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Query: 299 DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATL 358
D + ERN V W A+ GYV + + + R I D + +V +L C+ + +
Sbjct: 353 DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI-DNVTLVWILNVCSGISDV 411
Query: 359 SLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIA 418
+GKQ H +I R + + +A+AL+DMY KCG + A F+ +++ RD + +N ++
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL-RDEVSWNALLT 470
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNV 477
G A G +A+ F+ M ++ KP T LL+ C + + LG+ +++ Y +
Sbjct: 471 GVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLV 532
++ MVDMY + + A+E ++ + D +W + + C N + V
Sbjct: 530 --DVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGRSKEV 581
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 239/517 (46%), Gaps = 43/517 (8%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+I+ Y K ++ AR +FD + VS+N ++ Y G + A+ +F +M +
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM-GFNDEAVVMFFKMLEL-N 258
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
++ + ML S L + GK +H+ VK + +S+ DMY KC A
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEV-GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESA 317
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
VF DL S + ++ G A +F PE N VSWN ++ GYV
Sbjct: 318 RRVFDQTRSK-DLKSWTSAMSGYAMSGLTREARELFDLMPERN-IVSWNAMLGGYVHAHE 375
Query: 190 MERALTLFIEMIEKGIE-YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ AL F+ ++ + IE + TL +L+ C+G+ +++GK H + ++ +N V++
Sbjct: 376 WDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVAN 434
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE-RNYV 307
++D Y KCG ++ A F +SE R+ V
Sbjct: 435 ALLDMYGKCGTLQ-------------------------------SANIWFRQMSELRDEV 463
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
W AL +G + + E F + P + +L CA L+LGK H +
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEAK--PSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
++R +D + A+VDMYSKC YA + F+ + RD+IL+N +I G +G
Sbjct: 522 LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK--EAATRDLILWNSIIRGCCRNGRSK 579
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+ +LF + +KPD +TF+ +L AC G VELG ++F SM Y++ P++ HY CM
Sbjct: 580 EVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCM 639
Query: 488 VDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACK 524
+++Y + L + EF+ +P + +AC+
Sbjct: 640 IELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQ 676
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 178/399 (44%), Gaps = 71/399 (17%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSA 67
SW + + Y + +AR LFD R++VS+N+ML Y A D ALD M+
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE-ALDFLTLMRQE 389
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
+ I D +TL +LN+ + + V GKQ H ++ + D + ++L+DMY KCG+ +
Sbjct: 390 IENI--DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQ 447
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A N++ F + E D VSWN L+ G +
Sbjct: 448 SA-NIW-------------------------------FRQMSELRDEVSWNALLTGVARV 475
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
G E+AL+ F E ++ + +++TLA++L+ C + L LGK +H ++++ + +
Sbjct: 476 GRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR 534
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+VD Y KC YA V F + R+ +
Sbjct: 535 GAMVDMYSKCRCFDYAIEV-------------------------------FKEAATRDLI 563
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
+W ++ G ++ + + VF+LF E + PD + + +L AC + + LG Q +
Sbjct: 564 LWNSIIRGCCRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSS 622
Query: 368 ILRTKLNMDEKLA--SALVDMYSKCGNIAYAEKSFQLVT 404
+ TK ++ ++ ++++Y K G + E+ L+
Sbjct: 623 -MSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 238/503 (47%), Gaps = 54/503 (10%)
Query: 91 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 150
V GK +HS +K SSLI MY KCG A VF ++ + NAM+
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER-NVATWNAMIG 120
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
+G +A +F + +TV+W +I GY + +E+A LF M
Sbjct: 121 GYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM---------- 170
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
LKN S ++ Y M A + I
Sbjct: 171 ----------------------PFELKNVKAW-----SVMLGVYVNNRKMEDARKFFEDI 203
Query: 271 GIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFR 330
K+ F S +++GY G++ +A+ +F + R+ V+W L +GY ++ + F
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 331 EFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
+ E PD + + ++L ACA L +G++ H+ I + +++ +++AL+DMY+KC
Sbjct: 264 NMQG-EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
G++ A F+ + S R V N MI+ A HG +A+++F M + LKPD ITF+A
Sbjct: 323 GDLENATSVFESI--SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 451 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 510
+L+AC H G + G K F MK +V P + H+ C++ + GR +L++A ++++ ++
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 511 IDASIWGAFLNACKINNNTTLVKQAEEELLKVEADNGS--------RYVQLANVYAAEGK 562
+ ++ GA L ACK++ +T + E+++K+ GS ++N+YA +
Sbjct: 440 PNDTVLGALLGACKVHMDTEMA----EQVMKIIETAGSITNSYSENHLASISNLYAHTER 495
Query: 563 WNEMGRIRKEMRGKEATKLPGCS 585
W +R EM + K PG S
Sbjct: 496 WQTAEALRVEMEKRGLEKSPGLS 518
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 200/426 (46%), Gaps = 52/426 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
+++I Y K + AR +FD R++ ++N+M+ Y ++G +A LF + R+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM-SNGDAVLASGLFEEISVCRN 143
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL------SSLIDMYSKC 123
T+ E+ + YGK++ + + F L S ++ +Y
Sbjct: 144 TVTWIEM-------------IKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN 190
Query: 124 GSFREAYNVFSGCDGVVDLVSKNA-----MVAACCRDGKMDMALNVFWKNPEFNDTVSWN 178
+A F D+ KNA M++ R G + A +F++ D V WN
Sbjct: 191 RKMEDARKFFE------DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA-RDLVIWN 243
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
TLIAGY QNGY + A+ F M +G E + T++S+LSAC L +G+ VH+L+
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 239 DGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLF 298
NQFVS+ ++D Y KCG++ A SV+ I ++S +S+I+ + G +A +F
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 299 DSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM---IIVNVLGA 351
++ + + + + A+ + V K+F E +T + + P+ ++++LG
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLLGR 422
Query: 352 CA-IQATLSLGKQTH---------AYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKS 399
++ L K+ H A + K++MD ++A ++ + G+I +Y+E
Sbjct: 423 SGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENH 482
Query: 400 FQLVTD 405
+++
Sbjct: 483 LASISN 488
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 21/339 (6%)
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL-KCLKLGKCVHALVL 236
+ LI ++ G +AL L+ + +G+ Y + +L AC + + LGK +H+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGV-YFPGWVPLILRACACVVPRVVLGKLLHSESI 73
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
K CS+ V S ++ Y KCG + A V+ + ++ +++I GY S G+ A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 297 LFDSLSE-RNYVVWTALCSGYVKSQQCEAVFKLFR----EFRTTEALIPDTMIIVNVLGA 351
LF+ +S RN V W + GY K + E +LF E + +A + VN
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
+ + +A++ S ++ Y + G++ A F V RD++
Sbjct: 194 EDARKFFEDIPEKNAFVW-----------SLMMSGYFRIGDVHEARAIFYRVF--ARDLV 240
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
++N +IAGYA +G+ + AI F M +PDA+T ++LSAC G +++G + S+
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH-SL 299
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQ 510
+ + ++DMY + LE A I ++
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 7/211 (3%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P +NAF W+ ++ Y + ++ +ARA+F RDLV +N++++ YA +G A+D
Sbjct: 203 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA-QNGYSDDAIDA 261
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F MQ + D +T++++L+ A+ + G+++HS + +L++F ++LIDMY
Sbjct: 262 FFNMQG--EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSW 177
+KCG A +VF V + N+M++ GK AL +F + D +++
Sbjct: 320 AKCGDLENATSVFESIS-VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYN 208
++ V G++ L +F EM + ++ N
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 348 VLGACA-IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
+L ACA + + LGK H+ ++ + D + S+L+ MY KCG + A K F +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM--P 108
Query: 407 DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
+R+V +N MI GY +G A LF+E IS+ + +T++ ++ R +E +
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEE---ISVCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
F M + L + ++ M+ +Y ++E A +F IP + +A +W ++
Sbjct: 166 LFERMPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 240/493 (48%), Gaps = 47/493 (9%)
Query: 26 RALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLS 85
R +FDS + ++ NSM ++ D + V L L+ Q +R I D + ++ +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDV-LRLYE--QRSRCGIMPDAFSFPVVIKSA 116
Query: 86 AKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS------GCDGV 139
+ +G + + K + + ++DMY K S A VF G D
Sbjct: 117 GR-----FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 140 V------------------------DLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV 175
V D+VS M+ + ++ A F + PE V
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE-KSVV 230
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
SWN +++GY QNG+ E AL LF +M+ G+ N+ T V+SAC+ L + + L+
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKA 294
+ N FV + ++D + KC +++ A ++ +G + T +++I+GY+ G+M+ A
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 295 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 354
++LFD++ +RN V W +L +GY + Q + F + PD + +++VL AC
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYN 414
A L LG YI + ++ +++ +L+ MY++ GN+ A++ F + +RDV+ YN
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM--KERDVVSYN 468
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
+ +A +G + + L +M ++PD +T+ ++L+AC GL++ G++ F S++
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN- 527
Query: 475 YNVLPEIYHYACM 487
P HYACM
Sbjct: 528 ----PLADHYACM 536
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 173/369 (46%), Gaps = 37/369 (10%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP + SW +I + K +L AR FD + +VS+N+MLS YA +G AL L
Sbjct: 193 MPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA-QNGFTEDALRL 251
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M R + +E T +++ + + + + + L+ F ++L+DM+
Sbjct: 252 FNDM--LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMH 309
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
+KC + A +F+ +LV+ NAM++ R G M A +F P+ N VSWN+L
Sbjct: 310 AKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN-VVSWNSL 368
Query: 181 IAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
IAGY NG A+ F +MI+ G + ++ T+ SVLSAC + L+LG C
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC--------- 419
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFD 299
IVD Y + ++ +S Y SLI Y+ GN+ +AKR+FD
Sbjct: 420 ----------IVD-YIRKNQIKLNDSGY-----------RSLIFMYARGGNLWEAKRVFD 457
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ ER+ V + L + + + L + + E + PD + +VL AC L
Sbjct: 458 EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK-DEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 360 LGKQTHAYI 368
G++ I
Sbjct: 517 EGQRIFKSI 525
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 20/240 (8%)
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+FDS++ N V ++ + K V +L+ E R+ ++PD I++
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLY-EQRSRCGIMPDAFSF-----PVVIKS 115
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVM 416
G A + + D + + ++DMY K ++ A K F + S R +NVM
Sbjct: 116 AGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI--SQRKGSDWNVM 173
Query: 417 IAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYN 476
I+GY G + +A +LF M + D +++ +++ +E K+F M E
Sbjct: 174 ISGYWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPEK-- 227
Query: 477 VLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNACKINNNTTLVK 533
+ + M+ Y + E A+ M ++ ++ + + W ++AC + +L +
Sbjct: 228 ---SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 229/497 (46%), Gaps = 70/497 (14%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
+ F +++ Y K + AR +FD RD+V + +M++ A + AL LF M
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA-HNKRQWEALGLFRTM 306
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKC 123
S + I + + LTT+L + ++ + GK++H++++K+ N + + F S LID+Y KC
Sbjct: 307 IS-EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G VF G +NA +SW L++G
Sbjct: 366 GDMASGRRVFYGSK------QRNA---------------------------ISWTALMSG 392
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
Y NG ++AL + M ++G + T+A+VL C L+ +K GK +H LKN N
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 452
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+ + ++ Y KCG Y P RLFD L +
Sbjct: 453 VSLVTSLMVMYSKCGVPEY------------PI-------------------RLFDRLEQ 481
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
RN WTA+ YV++ A ++FR ++ PD++ + VL C+ L LGK+
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR-PDSVTMGRVLTVCSDLKALKLGKE 540
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
H +IL+ + +++ ++ MY KCG++ A SF V + + + + +I Y +
Sbjct: 541 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV--AVKGSLTWTAIIEAYGCN 598
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
AI F++M+ P+ TF A+LS C G V+ +FF M YN+ P H
Sbjct: 599 ELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 484 YACMVDMYGRGNQLEKA 500
Y+ ++++ R ++E+A
Sbjct: 659 YSLVIELLNRCGRVEEA 675
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 213/461 (46%), Gaps = 74/461 (16%)
Query: 71 IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAY 130
I ++ T + +L + + + +GKQ+H ++ + ++F + L+ MY+ CGS ++A
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 131 NVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG-- 188
VF + NV+ SWN L+ G V +G
Sbjct: 167 KVFDE-----------------------STSSNVY----------SWNALLRGTVISGKK 193
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ L+ F EM E G++ N ++L++V + G L+ G HAL +KN ++ F+ +
Sbjct: 194 RYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 253
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
+VD Y KCG +G+ A+R+FD + ER+ VV
Sbjct: 254 SLVDMYFKCGK----------VGL---------------------ARRVFDEIVERDIVV 282
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
W A+ +G +++ LFR + E + P+++I+ +L L LGK+ HA++
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 369 LRTKLNMDEKLA-SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
L++K +++ S L+D+Y KCG++A + F R+ I + +++GYA +G +
Sbjct: 343 LKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAANGRFD 400
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-MSMKEDYNVLPEIYHYAC 486
+A++ M + +PD +T +L C ++ G++ ++K + LP +
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTS 458
Query: 487 MVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINN 527
++ MY + E + ++ Q + W A ++ C + N
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMID-CYVEN 497
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
+ + +E ALT+ + ++GI N T +++L AC K L GK VH + N SN
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE 303
+F+ + +V Y CG+++ A+ V FD +
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKV-------------------------------FDESTS 174
Query: 304 RNYVVWTALCSGYVKS--QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLG 361
N W AL G V S ++ + V F E R + + + NV + A + L G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL-NVYSLSNVFKSFAGASALRQG 233
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYA 421
+THA ++ L L ++LVDMY KCG + A + F + +RD++++ MIAG A
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV--ERDIVVWGAMIAGLA 291
Query: 422 HHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
H+ + +A+ LF+ M+ + + P+++ +L ++LG++ + + N + +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 481 IYHYACMVDMY 491
+ ++ ++D+Y
Sbjct: 352 PFVHSGLIDLY 362
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 221/453 (48%), Gaps = 42/453 (9%)
Query: 170 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKGIEYNQHTLASVLSACTGLKCLK 226
E ++ ++T+I ++ L F+ M+ E+ I + T ++ AC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
+GK +H V+KN F+S D + + G +R Y
Sbjct: 134 VGKQIHCWVVKN----GVFLS----DSHVQTGVLRI----------------------YV 163
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
+ A+++FD + + + V W L +GYV+ ++FRE + L PD +
Sbjct: 164 EDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM-LVKGLEPDEFSVT 222
Query: 347 NVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
L ACA L+ GK H ++ + + D + +ALVDMY+KCG I A + F+ +T
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR 282
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELG 464
R+V + +I GYA +G+ KA+ + + + +KPD++ + +L+AC H G +E G
Sbjct: 283 --RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACK 524
+M+ Y + P+ HY+C+VD+ R +L+ A+ + K+P++ AS+WGA LN C+
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 525 INNNTTLVKQAEEELLKVEADN----GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 580
+ N L + A + LL +E N + VQL+N+Y + + E ++R + + K
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 581 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
PG S + V+ + F SGD SH I++ +
Sbjct: 461 TPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 191/470 (40%), Gaps = 107/470 (22%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQ----ARALFDSASHRDLVSYNSMLSAYAGADGCDTVAL 58
HRN ++ + ++ A++ NL + A ++FDS + Y++M+ + + + L
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQ-PHLGL 98
Query: 59 DLFARM-QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
F M + + I +T ++ K GKQ+H ++VK LS
Sbjct: 99 RYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS-------- 150
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
D + + G R D + A VF + P+ D V W
Sbjct: 151 DSHVQTGVLR-----------------------IYVEDKLLLDARKVFDEIPQ-PDVVKW 186
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
+ L+ GYV+ G L +F EM+ KG+E ++ ++ + L+AC + L GK +H V K
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 238 NDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
S+ FV + +VD Y KCG + A V+ + ++ F+ ++LI GY++ G KA
Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMT 306
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+ L ER + + PD+++++ VL ACA
Sbjct: 307 CLERL-ERE------------------------------DGIKPDSVVLLGVLAACAHGG 335
Query: 357 TLSLGKQTHAYI-LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
L G+ + R ++ + S +VD+ + G +
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL---------------------- 373
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
+ A+ L ++M +KP A + ALL+ CR VELGE
Sbjct: 374 -----------DDALNLIEKM---PMKPLASVWGALLNGCRTHKNVELGE 409
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 123/263 (46%), Gaps = 13/263 (4%)
Query: 256 KCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTK----AKRLFDSLSERNYV 307
+C ++ +S ++ I ++ +A S L+ + N+ K A +FDS+ N
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 308 VWTALCSGYVKSQQCEAVFKLFREF--RTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V+ + +S Q + F E + P + ++ AC S+GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 366 AYILRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
++++ + + D + + ++ +Y + + A K F + DV+ ++V++ GY G
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVLMNGYVRCG 197
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
++ +++F+EML L+PD + L+AC G + G+ +K+ + +++
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 485 ACMVDMYGRGNQLEKAVEFMRKI 507
+VDMY + +E AVE +K+
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKL 280
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 179/334 (53%), Gaps = 17/334 (5%)
Query: 269 GIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVK-----SQQCE 323
G +S ++L+ Y+ G++ A+++FD + ER V W A+ GY +
Sbjct: 141 GFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNAR 200
Query: 324 AVFKLFREFRTTEALI-PDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN--MDEKLA 380
LFR F + + P +V VL A + L +G H YI + +D +
Sbjct: 201 KAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIG 260
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+ALVDMYSKCG + A F+L+ ++V + M G A +G N+ L M +
Sbjct: 261 TALVDMYSKCGCLNNAFSVFELM--KVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+KP+ ITF +LLSA RH GLVE G + F SMK + V P I HY C+VD+ G+ ++++A
Sbjct: 319 IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
Query: 501 VEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN----GSR---YVQL 553
+F+ +PI+ DA + + NAC I T + ++ + LL++E ++ GS YV L
Sbjct: 379 YQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVAL 438
Query: 554 ANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
+NV A +GKW E+ ++RKEM+ + PG S++
Sbjct: 439 SNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 154 RDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQ-----NGYMERALTLF--IEMIEKGIE 206
++G + A VF + PE +V+WN +I GY N +A+ LF G+
Sbjct: 159 KNGDLRYARKVFDEMPE-RTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 207 YNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS--NQFVSSGIVDFYCKCGNMRYAE 264
T+ VLSA + L++G VH + K + F+ + +VD Y KCG + A
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQ 320
SV+ + +K+ F +S+ G + G + L + ++E N + +T+L S Y
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 321 QCEAVFKLFREFRTTEALIP---DTMIIVNVLGAC-----AIQATLSLGKQTHAYILRTK 372
E +LF+ +T + P IV++LG A Q L++ + A +LR+
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 373 LN---------MDEKLASALVDM 386
N M E++ AL+++
Sbjct: 398 CNACSIYGETVMGEEIGKALLEI 420
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 109/274 (39%), Gaps = 56/274 (20%)
Query: 16 YIKAHNLTQARALFDSASHRDLVSYNSMLSAYAG----ADGCDTVALDLFARMQSARDTI 71
Y K +L AR +FD R V++N+M+ Y + A+ LF R +
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 72 GMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA--NDLSKFALSSLIDMYSKCGSFREA 129
+ T+ +L+ ++ ++ G +H Y+ K ++ F ++L+DMYSKCG A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
++VF ++ NVF +W ++ G NG
Sbjct: 277 FSVF-----------------------ELMKVKNVF----------TWTSMATGLALNGR 303
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSAC-------TGLKCLKLGKCVHAL--VLKNDG 240
L M E GI+ N+ T S+LSA G++ K K + V+++ G
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS 274
C IVD K G ++ A + IK
Sbjct: 364 C--------IVDLLGKAGRIQEAYQFILAMPIKP 389
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 249/521 (47%), Gaps = 44/521 (8%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
++ ++ RM S I DE T +++ A L YG+ +H + +++ + + ++L
Sbjct: 168 SVSVYKRMMS--KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 225
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA---LNVFWKNPEFND 173
I MY + G A +F D VS NA++ + K+ A L+ + +
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSER-DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
V+WNT+ G ++ G AL + M + + + L AC+ + LK GK H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 234 LVLKNDGCSNQF--VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
LV+++ S+ V + ++ Y +C ++R+A V+ +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA------------------- 385
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
+SLS W ++ SG+ +++ E L +E + P+ + + ++L
Sbjct: 386 -------NSLS-----TWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPL 432
Query: 352 CAIQATLSLGKQTHAYILRTKLNMD-EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
A L GK+ H YILR + D L ++LVDMY+K G I A++ F + RD
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDK 490
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
+ Y +I GY G A+ F++M + +KPD +T VA+LSAC H LV G F
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 471 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
M+ + + + HY+CMVD+Y R L+KA + IP + +++ L AC I+ NT
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 531 LVKQAEEE-LLKVEADNGSRYVQLANVYAAEGKWNEMGRIR 570
+ + A ++ LL+ + ++ Y+ LA++YA G W+++ ++
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 191/423 (45%), Gaps = 46/423 (10%)
Query: 167 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 226
+N E + WN LI Y++N + +++++ M+ KGI ++ T SV+ AC L
Sbjct: 142 ENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
G+ VH + + N +V + ++ Y + G + A ++ + + + +++I Y+
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 287 SKGNMTKAKRLFDSL----SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
S+ + +A +L D + E + V W + G +++ R I +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI-GS 320
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMD-EKLASALVDMYSKCGNIAYAEKSF 400
+ ++N L AC+ L GK H ++R+ + D + + ++L+ MYS+C ++ +A F
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVF 380
Query: 401 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
Q V + +N +I+G+A++ + L +EML P+ IT ++L G
Sbjct: 381 QQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 461 VELGEKF--FMSMKEDY-------NVLPEIY----------------------HYACMVD 489
++ G++F ++ ++ Y N L ++Y Y ++D
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 490 MYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
YGR + E A+ + M + I+ D A L+AC +N LV++ K+E
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN---LVREGHWLFTKMEHVF 555
Query: 547 GSR 549
G R
Sbjct: 556 GIR 558
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 196/523 (37%), Gaps = 141/523 (26%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFD----SASHRDLVSYNSMLSAYAGADGCDTV 56
M R+A SWNAII Y L +A L D S +V++N++ A GC
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI------AGGCLEA 298
Query: 57 -----ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT---ANDL 108
AL+ M++ IG + + L + + + +GK H ++++ ++D+
Sbjct: 299 GNYIGALNCVVGMRNCNVRIG--SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 109 SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN 168
+SLI MYS+C R A+ VF +
Sbjct: 357 DNVR-NSLITMYSRCSDLRHAFIVF---------------------------------QQ 382
Query: 169 PEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
E N +WN++I+G+ N E L EM+ G N TLAS+L + L+ G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 229 KCVHALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
K H +L+ + + + +VD Y K G + A+ V
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV--------------------- 481
Query: 288 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
FDS+ +R+ V +T+L GY + + E F++ + + PD + +V
Sbjct: 482 ----------FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVA 530
Query: 348 VLGACAIQATLSLG-----KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
VL AC+ + G K H + +R +L S +VD+Y +
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRA------------ 574
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
G+ +KA +F I +P + LL AC G
Sbjct: 575 ---------------------GYLDKARDIFH---TIPYEPSSAMCATLLKACLIHGNTN 610
Query: 463 LGE----KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
+GE K + K ++ + HY + DMY K V
Sbjct: 611 IGEWAADKLLLETKPEH-----LGHYMLLADMYAVTGSWSKLV 648
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 249/521 (47%), Gaps = 44/521 (8%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
++ ++ RM S I DE T +++ A L YG+ +H + +++ + + ++L
Sbjct: 168 SVSVYKRMMS--KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 225
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMA---LNVFWKNPEFND 173
I MY + G A +F D VS NA++ + K+ A L+ + +
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSER-DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
V+WNT+ G ++ G AL + M + + + L AC+ + LK GK H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 234 LVLKNDGCSNQF--VSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNM 291
LV+++ S+ V + ++ Y +C ++R+A V+ +
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA------------------- 385
Query: 292 TKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
+SLS W ++ SG+ +++ E L +E + P+ + + ++L
Sbjct: 386 -------NSLS-----TWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPL 432
Query: 352 CAIQATLSLGKQTHAYILRTKLNMD-EKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
A L GK+ H YILR + D L ++LVDMY+K G I A++ F + RD
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDK 490
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
+ Y +I GY G A+ F++M + +KPD +T VA+LSAC H LV G F
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 471 MKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTT 530
M+ + + + HY+CMVD+Y R L+KA + IP + +++ L AC I+ NT
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 531 LVKQAEEE-LLKVEADNGSRYVQLANVYAAEGKWNEMGRIR 570
+ + A ++ LL+ + ++ Y+ LA++YA G W+++ ++
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 191/423 (45%), Gaps = 46/423 (10%)
Query: 167 KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK 226
+N E + WN LI Y++N + +++++ M+ KGI ++ T SV+ AC L
Sbjct: 142 ENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
G+ VH + + N +V + ++ Y + G + A ++ + + + +++I Y+
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 287 SKGNMTKAKRLFDSL----SERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
S+ + +A +L D + E + V W + G +++ R I +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI-GS 320
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRT-KLNMD-EKLASALVDMYSKCGNIAYAEKSF 400
+ ++N L AC+ L GK H ++R+ + D + + ++L+ MYS+C ++ +A F
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVF 380
Query: 401 QLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
Q V + +N +I+G+A++ + L +EML P+ IT ++L G
Sbjct: 381 QQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 461 VELGEKF--FMSMKEDY-------NVLPEIY----------------------HYACMVD 489
++ G++F ++ ++ Y N L ++Y Y ++D
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 490 MYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEADN 546
YGR + E A+ + M + I+ D A L+AC +N LV++ K+E
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN---LVREGHWLFTKMEHVF 555
Query: 547 GSR 549
G R
Sbjct: 556 GIR 558
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 196/523 (37%), Gaps = 141/523 (26%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFD----SASHRDLVSYNSMLSAYAGADGCDTV 56
M R+A SWNAII Y L +A L D S +V++N++ A GC
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI------AGGCLEA 298
Query: 57 -----ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKT---ANDL 108
AL+ M++ IG + + L + + + +GK H ++++ ++D+
Sbjct: 299 GNYIGALNCVVGMRNCNVRIG--SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 109 SKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN 168
+SLI MYS+C R A+ VF +
Sbjct: 357 DNVR-NSLITMYSRCSDLRHAFIVF---------------------------------QQ 382
Query: 169 PEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
E N +WN++I+G+ N E L EM+ G N TLAS+L + L+ G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 229 KCVHALVLKNDGCSNQFV-SSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSS 287
K H +L+ + + + +VD Y K G + A+ V
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV--------------------- 481
Query: 288 KGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
FDS+ +R+ V +T+L GY + + E F++ + + PD + +V
Sbjct: 482 ----------FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVA 530
Query: 348 VLGACAIQATLSLG-----KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
VL AC+ + G K H + +R +L S +VD+Y +
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRA------------ 574
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
G+ +KA +F I +P + LL AC G
Sbjct: 575 ---------------------GYLDKARDIFH---TIPYEPSSAMCATLLKACLIHGNTN 610
Query: 463 LGE----KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
+GE K + K ++ + HY + DMY K V
Sbjct: 611 IGEWAADKLLLETKPEH-----LGHYMLLADMYAVTGSWSKLV 648
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/602 (26%), Positives = 270/602 (44%), Gaps = 84/602 (13%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
+P +N +WN + K L A LFD RD+VS+N+M+S G + +
Sbjct: 65 IPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSC-GFHEYGIRV 123
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFAL---SSLI 117
F MQ R I E T + + +L +R +G+Q+H + + +S++ L +S++
Sbjct: 124 FFDMQ--RWEIRPTEFTFSILASLVTCVR---HGEQIHGNAI--CSGVSRYNLVVWNSVM 176
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
DMY + G F D AL+VF E D VSW
Sbjct: 177 DMYRRLGVF--------------------------------DYALSVF-LTMEDRDVVSW 203
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
N LI +G E AL F M E I+ +++T++ V+S C+ L+ L GK AL +K
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 238 NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRL 297
SN V +D + KC R +SV +L
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCN--RLDDSV-----------------------------KL 292
Query: 298 FDSLSERNYVVWTALCSGYVKSQQC--EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
F L + + V+ ++ Y S C E +LF T+++ PD +VL +
Sbjct: 293 FRELEKWDSVLCNSMIGSY--SWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMN-A 348
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
L G H+ +++ ++D +A++L++MY K G++ A F TD +D+I +N
Sbjct: 349 VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFA-KTDG-KDLIFWNT 406
Query: 416 MIAGYAHHGFENKAIQLFQEML-KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
+I G A + +++ +F ++L SLKPD +T + +L AC + G V G + F SM++
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQ 534
+ V P HYAC++++ R + +A + KIP + + IW L A +T L +
Sbjct: 467 HGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAET 526
Query: 535 AEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVENGIH 594
+ +L+ E + Y+ L +Y +W ++R M + G S I +E+ +
Sbjct: 527 VAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVF 586
Query: 595 VF 596
F
Sbjct: 587 SF 588
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 10/287 (3%)
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLI 282
K L K VHA +L+ + + + Y K G++ A ++ I K+ + +
Sbjct: 18 KSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL 77
Query: 283 AGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
G G + A LFD + ER+ V W + SG V E ++F + + E I T
Sbjct: 78 KGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE--IRPT 135
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQ 401
++L ++ + G+Q H + + ++ + + ++++DMY + G YA F
Sbjct: 136 EFTFSILA--SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF- 192
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRH-RGL 460
+T DRDV+ +N +I + G + A+ F M ++ ++PD T ++S C R L
Sbjct: 193 -LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Query: 461 VELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
+ + + +K + L +DM+ + N+L+ +V+ R++
Sbjct: 252 SKGKQALALCIKMGF--LSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 220/453 (48%), Gaps = 42/453 (9%)
Query: 170 EFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKGIEYNQHTLASVLSACTGLKCLK 226
E ++ ++T+I ++ L F+ M+ E+ I + T ++ AC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 227 LGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYS 286
+GK +H V+KN F+S G + + G +R Y
Sbjct: 134 VGKQIHCWVVKN----GVFLSDG----HVQTGVLRI----------------------YV 163
Query: 287 SKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
+ A+++FD + + + V W L +GYV+ ++F+E + PD +
Sbjct: 164 EDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM-LVRGIEPDEFSVT 222
Query: 347 NVLGACAIQATLSLGKQTHAYILRTK-LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
L ACA L+ GK H ++ + + + D + +ALVDMY+KCG I A + F+ +T
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR 282
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELG 464
R+V + +I GYA +G+ KA + + +KPD++ + +L+AC H G +E G
Sbjct: 283 --RNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACK 524
+M+ Y + P+ HY+C+VD+ R +L+ A++ + K+P++ AS+WGA LN C+
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 525 INNNTTLVKQAEEELLKVEADN----GSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATK 580
+ N L + A + LL +E N + VQL+N+Y + + E ++R + + K
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 581 LPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
PG S + V+ + F SGD SH I++ +
Sbjct: 461 TPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 190/470 (40%), Gaps = 107/470 (22%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQ----ARALFDSASHRDLVSYNSMLSAYAGADGCDTVAL 58
HRN ++ + ++ A++ NL + A ++FDS + Y++M+ + + + L
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQ-PHLGL 98
Query: 59 DLFARM-QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
F M + + I +T ++ K GKQ+H ++VK LS
Sbjct: 99 RYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS-------- 150
Query: 118 DMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSW 177
D + + G R D + A VF + P+ D V W
Sbjct: 151 DGHVQTGVLR-----------------------IYVEDKLLFDARKVFDEIPQ-PDVVKW 186
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLK 237
+ L+ GYV+ G L +F EM+ +GIE ++ ++ + L+AC + L GK +H V K
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 238 NDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR 296
S+ FV + +VD Y KCG + A V+ + ++ F+ ++LI GY++ G KA
Sbjct: 247 KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 297 LFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
D + ER + + PD+++++ VL ACA
Sbjct: 307 CLDRI-ERE------------------------------DGIKPDSVVLLGVLAACAHGG 335
Query: 357 TLSLGKQTHAYI-LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNV 415
L G+ + R + + S +VD+ + G +
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL---------------------- 373
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
+ A+ L ++M +KP A + ALL+ CR VELGE
Sbjct: 374 -----------DDALDLIEKM---PMKPLASVWGALLNGCRTHKNVELGE 409
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 149/332 (44%), Gaps = 21/332 (6%)
Query: 256 KCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNMTK----AKRLFDSLSERNYV 307
+C ++ +S ++ I ++ +A S L+ + N+ K A +FDS+ N
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 308 VWTALCSGYVKSQQCEAVFKLFREF--RTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V+ + +S Q + F E + P + ++ AC S+GKQ H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 366 AYILRTKLNM-DEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHG 424
++++ + + D + + ++ +Y + + A K F + DV+ ++V++ GY G
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP--DVVKWDVLMNGYVRCG 197
Query: 425 FENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHY 484
++ +++F+EML ++PD + L+AC G + G+ +K+ + +++
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 485 ACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA 544
+VDMY + +E AVE K+ + + W A + K+A L ++E
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYG---YAKKATTCLDRIER 313
Query: 545 DNGSRY--VQLANVYA--AEGKWNEMGRIRKE 572
++G + V L V A A G + E GR E
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 7/376 (1%)
Query: 174 TVSWNTLIAGYVQNGYMERALTLFI-EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
T +WN +I N AL LFI MI ++++ T V+ AC ++LG VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 292
L +K ++ F + ++D Y KCG V+ + +S + ++++ G S +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 293 KAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGAC 352
A+ +F+ + RN V WTA+ + YVK+++ + F+LFR + + + P+ IVN+L A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD-VKPNEFTIVNLLQAS 261
Query: 353 AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVIL 412
+LS+G+ H Y + +D L +AL+DMYSKCG++ A K F ++ + +
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM--QGKSLAT 319
Query: 413 YNVMIAGYAHHGFENKAIQLFQEMLKI-SLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
+N MI HG +A+ LF+EM + S++PDAITFV +LSAC + G V+ G ++F M
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTL 531
+ Y + P H ACM+ + + ++EKA + + D +F N N T
Sbjct: 380 IQVYGISPIREHNACMIQLLEQALEVEKASNLVES--MDSDPDFNSSFGNEYTDGMNETN 437
Query: 532 VKQAEEELLKVEADNG 547
++ +++ + D G
Sbjct: 438 ETPSQHQIMFTKWDTG 453
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTA--NDLSKFALS 114
AL LF M + + D+ T ++ + G Q+H +K ND+ F +
Sbjct: 102 ALLLFILMMISHQS-QFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDV--FFQN 158
Query: 115 SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT 174
+L+D+Y KCG VF G +VS M+ + ++D A VF + P N
Sbjct: 159 TLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN-V 216
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
VSW +I YV+N + A LF M ++ N+ T+ ++L A T L L +G+ VH
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
KN + F+ + ++D Y KCG+++ A
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQ-------------------------------DA 305
Query: 295 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
+++FD + ++ W ++ + E LF E ++ PD + V VL ACA
Sbjct: 306 RKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
MP R+ SW ++ + L A +F+ R++VS+ +M++AY D A L
Sbjct: 180 MPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDE-AFQL 238
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F RMQ D + +E T+ +L S +L + G+ +H Y K L F ++LIDMY
Sbjct: 239 FRRMQV--DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
SKCGS ++A VF G +WN++
Sbjct: 297 SKCGSLQDARKVFDVMQG---------------------------------KSLATWNSM 323
Query: 181 IAGYVQNGYMERALTLFIEMIEKG-IEYNQHTLASVLSACTGLKCLKLG 228
I +G E AL+LF EM E+ +E + T VLSAC +K G
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 265/588 (45%), Gaps = 82/588 (13%)
Query: 39 SYNSMLSAYA--GADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 96
S+++++ A A G+ G A++L D D L +L +S V +Q
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELI------NDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 97 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 156
+H Y+ K + +SL+ Y S +A+ VF D + D
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF---DEMPD--------------- 118
Query: 157 KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVL 216
D +SWN+L++GYVQ+G + + LF+E+ + N+ + + L
Sbjct: 119 ---------------PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAAL 163
Query: 217 SACTGLKCLKLGKCVHALVLK---NDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK 273
+AC L LG C+H+ ++K G N V + ++D Y KCG M A V+ + K
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKG--NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK 221
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFR 333
+ ++++A S G + F + + V + L +VKS F++ +
Sbjct: 222 DTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 334 TTEALIPDTMIIVNVLGACAIQAT------LSLGKQTHAYILRT---------------- 371
+ +T++ V + +AT S G + Y L
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 372 ------KLNMDEKL--ASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHH 423
KL +D ++ ASAL+DMYSKCG + +AE F T +++I++N MI+GYA +
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW--TMPRKNLIVWNEMISGYARN 399
Query: 424 GFENKAIQLFQEMLKIS-LKPDAITFVALLSACRH-RGLVELGEKFFMSMKEDYNVLPEI 481
G +AI+LF ++ + LKPD TF+ LL+ C H +E+ +F M +Y + P +
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELLK 541
H ++ G+ ++ +A + +++ D W A L AC + K ++++
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 542 V-EADNGSR-YVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWI 587
+ +AD Y+ ++N+YA +W E+G+IRK MR K G SWI
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 213/460 (46%), Gaps = 59/460 (12%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
N+++ Y + +L A +FD D++S+NS++S Y + G + LF + R
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS-GRFQEGICLFLELH--RS 150
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS-LIDMYSKCGSFRE 128
+ +E + T L A+L + G +HS +VK + + + LIDMY KCG +
Sbjct: 151 DVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDD 210
Query: 129 AYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP------------------E 170
A VF + D VS NA+VA+C R+GK+++ L F + P +
Sbjct: 211 AVLVFQHMEEK-DTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGD 269
Query: 171 FND------------TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
FN+ + SWNT++ GYV + A F +M G+ +++++L+ VL+A
Sbjct: 270 FNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAA 329
Query: 219 CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT 278
L + G +HA K S V+S ++D Y KCG +++AE ++ + K+
Sbjct: 330 VAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVW 389
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYVV--------WTALCSGYVKSQQCEAVFKLFR 330
+ +I+GY+ G+ +A +LF+ L + ++ A+CS CE ++
Sbjct: 390 NEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS------HCEVPMEVML 443
Query: 331 EFRTTEALIPDTMIIVNVLGACA-IQATLSLGK--QTHAYILRTKLNMDEKLASALVDMY 387
+ E +I + I +V C+ I+A G+ Q I D AL+
Sbjct: 444 GY--FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGAC 501
Query: 388 SKCGNIAYAE----KSFQLVTDSDRDVILYNVMIAGYAHH 423
S ++ A+ K +L D+D+D LY VM YA+H
Sbjct: 502 SARKDLKAAKTVAAKMIEL-GDADKDEYLYIVMSNLYAYH 540
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 66/251 (26%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY------------- 47
M ++ SWNAI+ + + L F + D V+YN ++ A+
Sbjct: 218 MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 48 -----AGADGCDTV------------ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRV 90
+ +T+ A + F +M S+ + DE +L+ +L A L V
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS--GVRFDEYSLSIVLAAVAALAV 335
Query: 91 VCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVA 150
V +G +H+ K D S+LIDMYSKCG + A +L
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA-----------EL-------- 376
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEM-IEKGIEYNQ 209
+FW P N V WN +I+GY +NG A+ LF ++ E+ ++ ++
Sbjct: 377 -------------MFWTMPRKNLIV-WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDR 422
Query: 210 HTLASVLSACT 220
T ++L+ C+
Sbjct: 423 FTFLNLLAVCS 433
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 261/591 (44%), Gaps = 74/591 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
N F +A++ Y + A LFD R+L N +L + G +++ RM
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT-GESKRLFEVYLRM 204
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSK-FALSSLIDMYSKC 123
+ + + + +T M+ + R+V GKQ+HS +VK+ ++S F + L+D YS C
Sbjct: 205 E--LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Query: 124 GSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAG 183
G + F NA+ PE D +SWN++++
Sbjct: 263 GDLSGSMRSF------------NAV--------------------PE-KDVISWNSIVSV 289
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND-GCS 242
G + +L LF +M G + S L+ C+ ++ GK +H VLK S
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS 349
Query: 243 NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS 302
+ V S ++D Y KC GI++ + L+ SL
Sbjct: 350 SLHVQSALIDMYGKCN------------GIEN-------------------SALLYQSLP 378
Query: 303 ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
N +L + + + + ++F E D + + VL A ++ SL
Sbjct: 379 CLNLECCNSLMTSLMHCGITKDIIEMF-GLMIDEGTGIDEVTLSTVLKALSLSLPESLHS 437
Query: 363 QT--HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGY 420
T H +++ D ++ +L+D Y+K G + K F + ++ +I GY
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP--NIFCLTSIINGY 495
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPE 480
A +G +++ +EM +++L PD +T +++LS C H GLVE GE F S++ Y + P
Sbjct: 496 ARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPG 555
Query: 481 IYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
YACMVD+ GR +EKA + + D W + L +C+I+ N T+ ++A E L+
Sbjct: 556 RKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLM 615
Query: 541 KVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYVEN 591
+E +N + Y+Q++ Y G + +IR+ +E + G S + V+N
Sbjct: 616 NLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 16/241 (6%)
Query: 289 GNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE-----FRTTEALIPDTM 343
GN+ A FD +S R+ V + L SG + +L+ E R + + P
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP--- 116
Query: 344 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 403
+VL C+ + G Q H ++ + + SALV +Y+ + A K F +
Sbjct: 117 ---SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 404 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 463
DR++ + N+++ + G + +++ M + + +T+ ++ C H LV
Sbjct: 174 L--DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 464 GEKFF-MSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
G++ + +K +N+ I+ +VD Y L ++ +P + D W + ++
Sbjct: 232 GKQLHSLVVKSGWNI-SNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSV 289
Query: 523 C 523
C
Sbjct: 290 C 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
+D K GN+ A ++F + S RDV+ YN++I+G + +G +AI+L+ EM+ L+
Sbjct: 53 IDELIKSGNLLSAHEAFDEM--SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRE 110
Query: 444 DAITFVALLSAC 455
A TF ++LS C
Sbjct: 111 SASTFPSVLSVC 122
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 224/501 (44%), Gaps = 75/501 (14%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM--QSA 67
N +I + ++ +L AR +FDS ++ V++ +M+ Y G + A LF
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY-GLEDEAFALFEDYVKHGI 179
Query: 68 RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFR 127
R T +E +LNL ++ G+Q+H MVK + SSL+ Y++CG
Sbjct: 180 RFT---NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELT 235
Query: 128 EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQN 187
A F DM E D +SW +I+ +
Sbjct: 236 SALRAF-------------------------DMM--------EEKDVISWTAVISACSRK 262
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
G+ +A+ +FI M+ N+ T+ S+L AC+ K L+ G+ VH+LV+K ++ FV
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYV 307
+ ++D Y KCG + V+ G+ ++ +S+IA ++ +G +A LF + R+
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH-- 380
Query: 308 VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAY 367
LI + + +V++L AC L LGK+ HA
Sbjct: 381 ------------------------------LIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFEN 427
I++ + + + S LV +Y KCG A Q + RDV+ + MI+G + G E+
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP--SRDVVSWTAMISGCSSLGHES 468
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACM 487
+A+ +EM++ ++P+ T+ + L AC + + +G K+++ L ++ + +
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH-ALSNVFVGSAL 527
Query: 488 VDMYGRGNQLEKAVEFMRKIP 508
+ MY + + +A +P
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMP 548
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 185/379 (48%), Gaps = 39/379 (10%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGI 205
N ++++C R G + A VF PE N TV+W +I GY++ G + A LF + ++ GI
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKN-TVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI 179
Query: 206 EY-NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE 264
+ N+ +L+ C+ +LG+ VH ++K G N V S +V FY +C
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV-GVGNLIVESSLVYFYAQC------- 231
Query: 265 SVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEA 324
G +T A R FD + E++ + WTA+ S +
Sbjct: 232 ------------------------GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
+F +P+ + ++L AC+ + L G+Q H+ +++ + D + ++L+
Sbjct: 268 AIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326
Query: 385 DMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
DMY+KCG I+ K F + S+R+ + + +IA +A GF +AI LF+ M + L +
Sbjct: 327 DMYAKCGEISDCRKVFDGM--SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 445 AITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFM 504
+T V++L AC G + LG++ + ++ ++ +Y + +V +Y + + A +
Sbjct: 385 NLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 505 RKIPIQIDASIWGAFLNAC 523
+++P + D W A ++ C
Sbjct: 444 QQLPSR-DVVSWTAMISGC 461
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 157/353 (44%), Gaps = 68/353 (19%)
Query: 1 MPHRNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
M + F +++ Y K ++ R +FD S+R+ V++ S+++A+A +G A+ L
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA-REGFGEEAISL 372
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F R+ R I + +T+ ++L + + GK++H+ ++K + + + + S+L+ +Y
Sbjct: 373 F-RIMKRRHLIA-NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTL 180
KCG R+A+NV L S+ D VSW +
Sbjct: 431 CKCGESRDAFNVLQ------QLPSR---------------------------DVVSWTAM 457
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
I+G G+ AL EMI++G+E N T +S L AC + L +G+ +H++ KN
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
SN FV S ++ Y KCG + ++A R+FDS
Sbjct: 518 LSNVFVGSALIHMYAKCGFV-------------------------------SEAFRVFDS 546
Query: 301 LSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACA 353
+ E+N V W A+ GY ++ C KL E D I +L C
Sbjct: 547 MPEKNLVSWKAMIMGYARNGFCREALKLMYRME-AEGFEVDDYIFATILSTCG 598
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 237/527 (44%), Gaps = 106/527 (20%)
Query: 10 NAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARD 69
NA++ Y KA A +F++ D+VS+N++LS + + +AL+ RM+SA
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD----NQIALNFVVRMKSA-- 168
Query: 70 TIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA 129
+ D T +T L+ G Q+ S +VKT + +S I MYS+ GSFR A
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNG- 188
VF D +S F D +SWN+L++G Q G
Sbjct: 229 RRVF-------DEMS--------------------------FKDMISWNSLLSGLSQEGT 255
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+ A+ +F +M+ +G+E + + SV++ C LKL + +H L +K S V +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 249 GIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVV 308
++ Y KCG + +SV F +SERN V
Sbjct: 316 ILMSRYSKCGVLEAVKSV-------------------------------FHQMSERNVVS 344
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
WT + S S + +AV +F R + + P+ + V ++ A + G + H
Sbjct: 345 WTTMIS----SNKDDAV-SIFLNMR-FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLC 398
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENK 428
++T + + ++ + +Y+K + A+K+F+ +T R++I +N MI+G+A +GF ++
Sbjct: 399 IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT--FREIISWNAMISGFAQNGFSHE 456
Query: 429 AIQLFQEMLKISLKPDAITFVALLSACR-------------HRGLVELGEKFFMSMKEDY 475
A+++F ++ P+ TF ++L+A H L++LG
Sbjct: 457 ALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG----------L 505
Query: 476 NVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNA 522
N P + + ++DMY + ++++ + ++ Q + +W + ++A
Sbjct: 506 NSCPVV--SSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISA 549
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 145/328 (44%), Gaps = 46/328 (14%)
Query: 160 MALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH----TLASV 215
+A +F + + N T S N I+ ++ RAL++F E ++ G + +H TL
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGY-FGRHMDEVTLCLA 84
Query: 216 LSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSP 275
L AC G LK G +H +SG F C
Sbjct: 85 LKACRG--DLKRGCQIHGFS----------TTSGFTSFVC-------------------- 112
Query: 276 FATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTT 335
+++++ Y G A +F++L + + V W + SG+ +Q + F +
Sbjct: 113 -VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ----IALNFVVRMKS 167
Query: 336 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
++ D L C LG Q + +++T L D + ++ + MYS+ G+
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 396 AEKSFQLVTDSDRDVILYNVMIAGYAHHG-FENKAIQLFQEMLKISLKPDAITFVALLSA 454
A + F + S +D+I +N +++G + G F +A+ +F++M++ ++ D ++F ++++
Sbjct: 228 ARRVFDEM--SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 455 CRHRGLVELGEKFF-MSMKEDYNVLPEI 481
C H ++L + + +K Y L E+
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEV 313
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 339 IPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
+PD V + +CA +L K+ H + L++K D KL + ++ M+ +C +I A++
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKR 292
Query: 399 SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
F + D D D +++M+ Y+ +G + A+ LF+EM K LKP+ TF+ + AC
Sbjct: 293 VFDHMVDKDMDS--WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGA 518
G +E F SMK ++ + P+ HY ++ + G+ L +A +++R +P + A W A
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 519 FLNACKINNNTTLVKQAEEELLKVEA 544
N +++ + L EE ++ V+
Sbjct: 411 MRNYARLHGDIDLEDYMEELMVDVDP 436
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 202/475 (42%), Gaps = 37/475 (7%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN-- 131
D +TL+++LN + + + MV+ F ++LI EA
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 132 ---VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYV 185
V GC DLV+ +V C+ G +D+AL++ K + D V +NT+I G
Sbjct: 212 DQMVQRGCQP--DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKNDGC--- 241
+ +M+ AL LF EM KGI + T +S++S CL G+ A L +D
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS------CLCNYGRWSDASRLLSDMIERK 323
Query: 242 --SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMTKAK 295
N S ++D + K G + AE +Y + +S P F SSLI G+ + +AK
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 296 RLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
+F+ + + N V ++ L G+ K+++ E +LFRE + L+ +T+ ++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHG 442
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRD 409
+ ++ ++ + + L+D K G +A A F+ + S + D
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFM 469
+ YN+MI G G +LF + + P+ I + ++S +G E +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 470 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLN 521
MKED LP Y ++ R E + E MR DAS G N
Sbjct: 563 KMKED-GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 52/261 (19%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTV---- 56
N +++A+I A++K L +A L+D R D+ +Y+S+++ + D D
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 57 ------------------------------ALDLFARMQSARDTIGMDEITLTTMLNLSA 86
++LF M S R +G + +T TT+++
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVG-NTVTYTTLIHGFF 444
Query: 87 KLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVV---DLV 143
+ R + + MV + + L+D K G +A VF D+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 144 SKNAMVAACCRDGKMDMALNVFWK------NPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
+ N M+ C+ GK++ +F +P + +++NT+I+G+ + G E A +L
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP---NVIAYNTMISGFCRKGSKEEADSLL 561
Query: 198 IEMIEKGIEYNQHTLASVLSA 218
+M E G N T +++ A
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRA 582
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 201/457 (43%), Gaps = 61/457 (13%)
Query: 37 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 96
+V + +L+ A + D V + L+ +M++ I D + T +++ + +
Sbjct: 79 IVDFTRVLTVIAKMNKFDIV-IYLYHKMENL--GISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 97 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDG---VVDLVSKNAMVAACC 153
+ M+K S L SL++ + + F+EA ++ DG V ++V N ++ C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 154 RDGKMDMALNVFW---KNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
++ ++ AL VF+ K D V++NTLI+G +G A L +M+++ I+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID---- 251
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
N + ++D + K GN+ A ++Y +
Sbjct: 252 -------------------------------PNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 271 GIKS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 322
+S P F +SLI G+ G + AK +FD + + + V + L +G+ KS++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 382
E KLF E T + L+ D ++ L++ ++ ++ ++ D +
Sbjct: 341 EDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 383 LVDMYSKCGNIAYAEKSFQLVTD-----SDRDVILYNVMIAGYAHHGFENKAIQLFQEML 437
L+D G I EK+ +V D D D+I YN++I G +A LF+ +
Sbjct: 400 LLDCLCNNGKI---EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
+ +KPDAI ++ ++S +GL +K MKED
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV----SYNSMLSAYAGADGCDTVALDL 60
N + A+I ++K NL +AR L+ R +V +YNS+++ + GC A +
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYM 311
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S D +T T++ K + V G ++ M F ++LI Y
Sbjct: 312 FDLMVSK--GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 121 SKCGSFREAYNVFS---GCDGVVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFNDT 174
+ G A VF+ C D+V+ N ++ C +GK++ AL + K+ D
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
+++N +I G + ++ A LF + KG++ + +++S
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 170/413 (41%), Gaps = 64/413 (15%)
Query: 123 CGSFREAYNVFSGCD-----GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEF---NDT 174
C F +A+++F C+ + +V ++ + K D+ + ++ K +D
Sbjct: 57 CIKFDDAFSLF--CEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHA 233
S+ LI + + + AL L +M++ G + TL S+L+ C G + + +
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE----AVS 170
Query: 234 LVLKNDG---CSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYS 286
LV DG N + + +++ CK ++ A V+ + GI++ T ++LI+G S
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 287 SKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
+ G T A RL + +R N + +TAL +VK L++E +++P+
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM-IRRSVVPNV 289
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
+++ I L K + D+ G
Sbjct: 290 FTYNSLINGFCIHGCLGDAKY-------------------MFDLMVSKGCFP-------- 322
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
DV+ YN +I G+ ++LF EM L DA T+ L+ G +
Sbjct: 323 ------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA---VEFMRKIPIQID 512
+ +K F M D V P+I Y ++D ++EKA VE ++K + +D
Sbjct: 377 VAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 200/468 (42%), Gaps = 52/468 (11%)
Query: 142 LVSKNAMVAACCRDGKMDMA----LNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
+++ N M+ +C + G ++ L + +N EF++ V++N LI G+ +NG ME A
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE-VTYNILINGFSKNGKMEEARRFH 296
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIV------ 251
+M G ++ ++ G C L G +++ +++GI
Sbjct: 297 GDMRRSGFAVTPYSFNPLIE----------GYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 346
Query: 252 DFY----CKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----E 303
+ Y C G + A + + + + ++L+ GY G +A LFD L
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+ V + L G +S E +L +E TT+ + PD + ++ LS+ +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRL-KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL-----VTDSD-RDVILYNVMI 417
+ +LR + D + + G+ ++K+F+L TD D+ +YNV I
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGD---SDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
G G KAI+ +++ ++ L PD +T+ ++ G ++ + M +
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RL 581
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFL-NACKINNNTTLVK 533
P + Y ++ + + +LE+A ++ M+K ++ + A L CK N +
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN----ID 637
Query: 534 QAEEELLKVEAD----NGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE 577
+A L K+E + N Y L + KW E+ ++ KEM KE
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 213/524 (40%), Gaps = 64/524 (12%)
Query: 37 LVSYNSML-SAYAGAD--GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCY 93
++++N+ML S + D D + L++ R I E+T ++N +K +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEM------KRRNIEFSEVTYNILINGFSKNGKMEE 291
Query: 94 GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC--DGVVDLVSK-NAMVA 150
++ H M ++ ++ ++ + LI+ Y K G F +A+ V G+ S N +
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 151 ACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQH 210
A C G++D A + + D VS+NTL+ GY++ G A LF +
Sbjct: 352 ALCDFGRIDDARELL-SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD----------- 399
Query: 211 TLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM----RYAESV 266
L+ G ++V N ++D C+ GN+ R E +
Sbjct: 400 --------------LRAGDIHPSIVTYN----------TLIDGLCESGNLEGAQRLKEEM 435
Query: 267 YAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 322
+ ++L+ G+ GN++ A ++D + + + +T G ++
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 323 EAVFKLFREFRTTEALIPD-TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLAS 381
+ F+L E T+ PD T+ V + G C + L + I R L D +
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV-GNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 382 ALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKI 439
++ Y + G A + L VI Y V+I G+A G +A Q EM K
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 440 SLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEK 499
++P+ +T ALL G ++ ++ M+E+ + P Y Y ++ + E+
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLISKNCDFEKWEE 673
Query: 500 AVEFMRKI---PIQIDASIWGAFLNACKINNNTTLVKQAEEELL 540
V+ +++ I+ D A + ++ + V+ E LL
Sbjct: 674 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLL 717
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 182/469 (38%), Gaps = 101/469 (21%)
Query: 6 AFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQ 65
+S+N +I Y K A + D + + S + Y A CD F R+
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA-LCD------FGRID 360
Query: 66 SARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGS 125
AR+ +L+ A VV Y MH Y+ + KF +SL+
Sbjct: 361 DARE-----------LLSSMAAPDVVSYNTLMHGYI-----KMGKFVEASLL-------- 396
Query: 126 FREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTVSWNTLIA 182
++ D +V+ N ++ C G ++ A + + F D +++ TL+
Sbjct: 397 ----FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 183 GYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS 242
G+V+NG + A ++ EM+ KGI+ + + + + L+LG A L + +
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT-----RAVGELRLGDSDKAFRLHEEMVA 507
Query: 243 NQFVSSGI------VDFYCKCGNM----RYAESVYAGIGIKSPFATSSLIAGYSSKGNMT 292
+ + +D CK GN+ + ++ + +++I GY G
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 293 KAKRLFDS-LSERNY---VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
A+ L+D L +R Y + + L G+ K+ + E F+ E + + P+ M
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK-KRGVRPNVM----- 621
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR 408
TH +AL+ K GNI +++++ + +
Sbjct: 622 ---------------TH---------------NALLYGMCKAGNI---DEAYRYLCKMEE 648
Query: 409 DVIL-----YNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
+ I Y ++I+ + ++L++EML ++PD T AL
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 199/469 (42%), Gaps = 56/469 (11%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHS------YMVKTANDLSKFALSSLIDMYSKCGSFR 127
D +TL ++LN C+G ++ MV+ F ++LI +
Sbjct: 150 DIVTLNSLLN------GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 128 EAYN-----VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNT 179
EA V GC DLV+ +V C+ G +D+AL++ K + V +NT
Sbjct: 204 EAVALVDRMVVKGCQP--DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKN 238
+I + AL LF EM KGI N T S++ +CL G+ A L +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI------RCLCNYGRWSDASRLLS 315
Query: 239 DGC-----SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKG 289
D N S ++D + K G + AE +Y + +S P F SSLI G+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 290 NMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
+ +AK +F+ + + N V + L G+ K+++ + +LFRE + L+ +T+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTY 434
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLA-----SALVDMYSKCGNIAYAEKSF 400
+ I + +A I+ ++ D L S L+D G + A F
Sbjct: 435 TTL-----IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 401 QLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
+ + S + D+ YN+MI G G LF + +KP+ +T+ ++S +
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
GL E + F MKE+ LP+ Y ++ + R + E +R++
Sbjct: 550 GLKEEADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 151/347 (43%), Gaps = 27/347 (7%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSM---LSAYAGADGCDTVALDLF 61
+N II A N+ A LF ++ ++V+YNS+ L Y + D+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID--- 118
R I + +T + +++ K + ++++ M+K + D F SSLI+
Sbjct: 319 ER------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTV 175
M+ + + + + D ++V+ N ++ C+ ++D + +F + + +TV
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++ TLI G+ Q + A +F +M+ G+ + T + +L ++ V +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNM 291
++ + + + +++ CK G + ++ + G+K T +++++G+ KG
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 292 TKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRT 334
+A LF + E + + L +++ A +L RE R+
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N +++A+I A++K L +A L+D R D+ +Y+S+++ + D D A +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-AKHM 383
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S +D + +T T++ K + V G ++ M + + ++LI +
Sbjct: 384 FELMIS-KDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 121 SKCGSFREAYNVFSG--CDGVV-DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDT 174
+ A VF DGV+ D+++ + ++ C +GK++ AL VF ++ D
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
++N +I G + G +E LF + KG++ N T +++S
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 178/413 (43%), Gaps = 34/413 (8%)
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 188
V GC DLV+ +V C+ G D+A N+ K + + +NT+I G +
Sbjct: 213 VAKGCQP--DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL-KLGKCVHALVLKNDGCSNQ--- 244
+M+ AL LF EM KGI N T +S++S CL G+ A L +D +
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLIS------CLCNYGRWSDASRLLSDMIERKINP 324
Query: 245 --FVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLF 298
F S ++D + K G + AE +Y + I T SSLI G+ + +AK++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 299 DSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAI 354
+ + + + V + L G+ K ++ E ++FRE + L+ +T + N+L
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNT-VTYNILIQGLF 442
Query: 355 QA-TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVI 411
QA + ++ ++ + + + L+D K G + A F+ + S + +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
YN+MI G G LF + +KPD + + ++S +G E + F M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLN 521
KED LP Y ++ R E + E MR DAS G N
Sbjct: 563 KED-GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 149/347 (42%), Gaps = 27/347 (7%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSA---YAGADGCDTVALDLF 61
+N II K ++ A LF + ++V+Y+S++S Y + D+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID--- 118
R I D T + +++ K + ++++ MVK + D S SSLI+
Sbjct: 319 ER------KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTV 175
M+ + ++ + D+V+ N ++ C+ +++ + VF + + +TV
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++N LI G Q G + A +F EM+ G+ N T ++L L+ V +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNM 291
++ + + +++ CK G + ++ + +K P A +++I+G+ KG+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 292 TKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
+A LF + E N + L ++ EA +L +E R+
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
+ F+++A+I A++K L +A L+D R +V+Y+S+++ + D D A +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE-AKQM 383
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S D +T T++ K + V G ++ M + + + LI
Sbjct: 384 FEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 121 SKCGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFNDTV 175
+ G A +F DGV ++++ N ++ C++GK++ A+ VF + + T+
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 176 -SWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
++N +I G + G +E LF + KG++
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 215/484 (44%), Gaps = 45/484 (9%)
Query: 88 LRVVCYGKQMHSYMVKTANDL-------SKFALSSLIDMYSKCGSFREAYNV-----FSG 135
+R C GK++ + + AN++ S LID + K G EA F G
Sbjct: 184 IRGFCEGKELEKAL-ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT---VSWNTLIAGYVQNGYMER 192
+ DLV +++ C G++D +F + E D+ +++NTLI G+ + G ++
Sbjct: 243 LEA--DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVD 252
A +F MIE+G+ N +T ++ G+ K + L+++ D N + I++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 253 FYCKCGNMRYAESVYAGIGIKSP----FATSSLIAGYSSKGNMTKAKRLF------DSLS 302
CK G + A + + + + L+ G +KG++ +A +L S +
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 303 ERNYVVWTALCSGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ + + + AL G K Q ++ L E + +++ + L A + +
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 360 LGKQTHAYILRTKLNMDEKLASALVDMYSKCG--NIAYAEKSFQLVTDSDRDVILYNVMI 417
L KQ I +K+ + +A++D + K G N+A V++ V YN ++
Sbjct: 481 LWKQ----ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 418 AGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNV 477
+ G ++A +LF+EM + + PD ++F ++ G ++ E + M +
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR-AGL 595
Query: 478 LPEIYHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDASIWGAFLNAC----KINNNTT 530
P+++ Y+ +++ + + L++A+ F K+ + DA I + L C + + T
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 531 LVKQ 534
LVK+
Sbjct: 656 LVKK 659
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 85/371 (22%)
Query: 146 NAMVAACCRD---GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 202
N ++ CR+ GK L +N D S+NT+I G+ + +E+AL L EM
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-- 203
Query: 203 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI-VDFYCKCGNMR 261
K GCS V+ GI +D +CK G M
Sbjct: 204 ----------------------------------KGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 262 YAESVYAG---IGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN----YVVWTALC 313
A +G+++ +SLI G+ G + + K LFD + ER + + L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLGKQTHAYILRTK 372
G+ K Q + ++F EF + P+ ++ G C + GK A L
Sbjct: 290 RGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGLCGV------GKTKEALQL--- 339
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQL 432
LN+ M K D + + + YN++I G A+++
Sbjct: 340 LNL----------MIEK---------------DEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 433 FQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMY 491
+ M K +PD IT+ LL C L E + ++ +K+ P++ Y ++
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 492 GRGNQLEKAVE 502
+ N+L +A++
Sbjct: 435 CKENRLHQALD 445
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 103/493 (20%), Positives = 186/493 (37%), Gaps = 79/493 (16%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVALD---- 59
+W +I A+ KA + +A DLV Y S++ + CD LD
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF-----CDCGELDRGKA 268
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
LF + D+ IT T++ KL + ++ +M++ + + + LID
Sbjct: 269 LFDEVLERGDSPC--AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 120 YSKCGSFREA---YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFND 173
G +EA N+ D + V+ N ++ C+DG + A+ + K D
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
+++N L+ G G ++ A L M++ S+ T + +H
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKD-------------SSYTDPDVISYNALIHG 433
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVY----AGIGIKSPFATSSLIAGYSSKG 289
L CK + A +Y +G T+ L+ G
Sbjct: 434 L--------------------CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 290 NMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
++ KA L+ +S+ RN +TA+ G+ K+ L + R +E L P
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE-LQPSVFDY 532
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA-----LVDMYSKCGNIAYAEKSF 400
C + + G A+ L ++ D ++D K G+I AE
Sbjct: 533 -----NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 401 QLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
++ + D+ Y+ +I + G+ ++AI F +M+ +PDA ++L C +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 459 G----LVELGEKF 467
G L EL +K
Sbjct: 648 GETDKLTELVKKL 660
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 128/274 (46%), Gaps = 16/274 (5%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
+ S+NA+I K + L QA ++D + D V+ N +L++ A G A++L
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA-GDVNKAMEL 481
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ ++ ++ I + T T M++ K ++ K + M + S F + L+
Sbjct: 482 WKQISDSK--IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 121 SKCGSFREAYNVFSGC---DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DT 174
K GS +A+ +F + D+VS N M+ + G + A ++ D
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL-KCLKLGKCVHA 233
+++ LI +++ GY++ A++ F +M++ G E + H SVL C + KL + V
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
Query: 234 LVLKNDGCSNQFVSSGIVDFYCK-CGNMRYAESV 266
LV K D ++ ++ ++D+ C NM A+ +
Sbjct: 660 LVDK-DIVLDKELTCTVMDYMCNSSANMDLAKRL 692
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 218/545 (40%), Gaps = 78/545 (14%)
Query: 22 LTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTM 81
+ Q+R L +V +N +LSA A + D V + L RMQ+ R I D + +
Sbjct: 71 MVQSRPL------PSIVEFNKLLSAIAKMNKFDLV-ISLGERMQNLR--ISYDLYSYNIL 121
Query: 82 LNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREA------------ 129
+N + + + M+K + LSSL++ Y EA
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 130 ------YN----------------------VFSGCDGVVDLVSKNAMVAACCRDGKMDMA 161
+N V GC DL + +V C+ G +D+A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP--DLFTYGTVVNGLCKRGDIDLA 239
Query: 162 LNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
L++ K + D V + T+I + AL LF EM KGI N T S++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI-- 297
Query: 219 CTGLKCL-KLGKCVHALVLKNDGC-----SNQFVSSGIVDFYCKCGNMRYAESVYAGIGI 272
+CL G+ A L +D N S ++D + K G + AE +Y +
Sbjct: 298 ----RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 273 KS--P--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEA 324
+S P F SSLI G+ + +AK +F+ + + N V + L G+ K+++ E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 325 VFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALV 384
+LFRE + L+ +T+ ++ + ++ ++ + D S L+
Sbjct: 414 GMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 385 DMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 442
D K G + A F+ + S + D+ YN+MI G G LF + +K
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 443 PDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE 502
P+ I + ++S +GL E + F MKED LP Y ++ R + E
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 503 FMRKI 507
++++
Sbjct: 592 LIKEM 596
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N +++A+I A++K L +A L+D R D+ +Y+S+++ + D D A +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-AKHM 382
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S +D + +T T++ K + V G ++ M + + ++LI
Sbjct: 383 FELMIS-KDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 121 SKCGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDT 174
+ G A +F DGV D+++ + ++ C+ GK++ AL VF K+ D
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
++N +I G + G +E LF + KG++ N +++S
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 197
D V+ ++ C+ G +AL++F K E N V ++ +I ++G + AL+LF
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 198 IEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
EM KGI+ + T +S++ C K K + ++ +N + S ++D + K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVK 327
Query: 257 CGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL----SERNYVV 308
G + A+ +Y + GI T +SLI G+ + + +A ++FD + E + V
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN-VLGACAIQATLSLGKQTHAY 367
++ L + Y K+++ + +LFRE +++ LIP+T+ VLG C L+ K+
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQ-SGKLNAAKELFQE 445
Query: 368 ILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD--VILYNVMIAGYAHHGF 425
++ + L+D G + A + F+ + S + +YN++I G +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 426 ENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYA 485
+ A LF + +KPD +T+ ++ +G + + F MKED P+ + Y
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYN 564
Query: 486 CMVDMYGRGNQLEKAVEFMRKIPI 509
++ + G+ L +VE + ++ +
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKV 588
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 169/385 (43%), Gaps = 25/385 (6%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLF 197
D+ + M+ CR K+ A +V WK DT++++TL+ G+ G + A+ L
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND----GCSNQFVSSG-IVD 252
M+E + L +V + GL CLK G+ ALVL + G V+ G +++
Sbjct: 164 DRMVEM---KQRPDLVTVSTLINGL-CLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 253 FYCKCGNMRYAESVYAGI---GIKSPFATSSLIAGYSSK-GNMTKAKRLFDSLSER---- 304
CK GN A ++ + IK+ S++ K G+ A LF+ + +
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 305 NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
+ V +++L G + + K+ RE +IPD + ++ + L K+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAH 422
+ ++ + D ++L+D + K + A + F L+ + D++ Y+++I Y
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
+ ++LF+E+ L P+ IT+ L+ G + ++ F M V P +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVV 456
Query: 483 HYACMVDMYGRGNQLEKAVEFMRKI 507
Y ++D +L KA+E K+
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM 481
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 24/351 (6%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 197
D ++ + +V C +G++ A+ + + E D V+ +TLI G G + AL L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVL-----KNDGCSNQFVSSGIVD 252
M+E G + ++ T VL+ + K G AL L + + ++ S ++D
Sbjct: 199 DRMVEYGFQPDEVTYGPVLN-----RLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 253 FYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN--- 305
CK G+ A S++ + GIK+ T SSLI G + G ++ + RN
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 306 -YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQT 364
V ++AL +VK + +L+ E T + PDT+ +++ + L Q
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAH 422
++ D S L++ Y K + + F+ ++ + I YN ++ G+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
G N A +LFQEM+ + P +T+ LL G + + F M++
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 219/521 (42%), Gaps = 60/521 (11%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL-DL 60
+++N +I + + ++ A AL +V+ +S+L+ Y G D VAL D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
M DTI T TT++ +G +H+ + +L+D
Sbjct: 181 MVEMGYRPDTI-----TFTTLI----------HGLFLHNKASEAV---------ALVDRM 216
Query: 121 SKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSW 177
V GC +LV+ +V C+ G D+ALN+ K D V +
Sbjct: 217 -----------VQRGCQP--NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVL 236
NT+I + +++ AL LF EM KGI N T +S++S C+ + + + ++
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 237 KNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNMT 292
K N + ++D + K G AE +Y + +S P F +SL+ G+ +
Sbjct: 324 KKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 293 KAKRLFDSLSERN----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNV 348
KAK++F+ + ++ V + L G+ KS++ E +LFRE + L+ DT+ +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTL 441
Query: 349 LGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD- 407
+ ++ ++ + D S L+D G + A + F + S+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 408 -RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
D+ +Y MI G G + LF + +KP+ +T+ ++S + L++
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
MKED LP Y ++ + R + E +R++
Sbjct: 562 LLKKMKED-GPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 197/505 (39%), Gaps = 89/505 (17%)
Query: 37 LVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQ 96
+V +N +LSA A D V + L +MQ G+ T ++N + +
Sbjct: 85 IVEFNKLLSAIAKMKKFD-VVISLGEKMQRLEIVHGL--YTYNILINCFCRRSQISLALA 141
Query: 97 MHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDG 156
+ M+K + S LSSL++ Y C G K A D
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGY---------------CHG------KRISDAVALVDQ 180
Query: 157 KMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVL 216
++M DT+++ TLI G + A+ L M+++G + N T V+
Sbjct: 181 MVEMGYR--------PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 217 SACTGLKCLKLGKCVHALVLKNDGCSNQF-----VSSGIVDFYCKCGNMRYAESVYAGI- 270
+ K G AL L N + + + + I+D CK ++ A +++ +
Sbjct: 233 NGLC-----KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 271 --GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCE 323
GI+ T SSLI+ S G + A +L + E+ N V + AL +VK +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 324 AVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASAL 383
KL+ + ++ PD +++ + L KQ +
Sbjct: 348 EAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF---------------- 390
Query: 384 VDMYSKCGNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKP 443
M SK D DV+ YN +I G+ +LF+EM L
Sbjct: 391 --MVSK---------------DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 444 DAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE- 502
D +T+ L+ H G + +K F M D V P+I Y+ ++D +LEKA+E
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 503 --FMRKIPIQIDASIWGAFLNA-CK 524
+M+K I++D I+ + CK
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCK 517
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N ++NA+I A++K +A L+D R D+ +YNS+++ + D D A +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK-AKQM 387
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S +D D +T T++ K + V G ++ M ++LI
Sbjct: 388 FEFMVS-KDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 121 SKCGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN-DT 174
G A VF DGV D+++ + ++ C +GK++ AL VF + E D
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK-----LGK 229
+ T+I G + G ++ LF + KG++ N T +++S + L+ L K
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 230 CVHALVLKNDGCSNQFVSSGIVD 252
L N G N + + + D
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRD 588
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 122/562 (21%), Positives = 242/562 (43%), Gaps = 77/562 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDL 60
N + NA + + KA +A+ +F D D V+YN M+ Y+ D A+ L
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE-AIKL 525
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ M + D I + +++N K V +M M + + ++L+
Sbjct: 526 LSEMM--ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 121 SKCGSFREAYNVFSG-----CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN--- 172
K G +EA +F G C + ++ N + C++ ++ +AL + +K +
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPP--NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLK------ 226
D ++NT+I G V+NG ++ A+ F +M +K + + TL ++L ++
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 227 ---LGKCVH-----------ALVLKNDGCSN------QFVSSGI-----------VDFYC 255
L C +L G N + V++GI + + C
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 256 KCGNMRYAESVY----AGIGIKSPFATSSLIAGYSSKGNMTK-AKRLFDSLSE----RNY 306
K N+ A +++ +G++ T +L+ G + +M + A+ +F + +
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 307 VVWTALCSGYVKSQQCEAVFKLFREFRTTEA---LIPDTMIIVNVLGACAIQATLSLGKQ 363
+ L Y KS + + +F+L++E T E I ++I ++ A + L L
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL--- 877
Query: 364 THAYILRTKLNMDEKLAS--ALVDMYSKCGNIAYAEKSFQLVTD--SDRDVILYNVMIAG 419
Y L + + + L+D SK G + A++ F+ + D + +YN++I G
Sbjct: 878 --YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
+ G + A LF+ M+K ++PD T+ L+ G V+ G +F +KE + P
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNP 994
Query: 480 EIYHYACMVDMYGRGNQLEKAV 501
++ Y +++ G+ ++LE+A+
Sbjct: 995 DVVCYNLIINGLGKSHRLEEAL 1016
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 202/518 (38%), Gaps = 83/518 (16%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALF---DSASHRDLVSYNSMLSAYAGADGCDTVALDLF 61
N ++N +I ++ H L A LF +S + + Y G G AL+ F
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
+M++ I + + L AK KQ+ + + ++ YS
Sbjct: 457 EKMKTK--GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 122 KCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---D 173
K G EA + S GC+ D++ N+++ + ++D A +F + E
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEP--DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
V++NTL+AG +NG ++ A+ LF M++KG N T ++ CL
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD------CL-------- 618
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTK 293
C N V+ + + K +M V F +++I G G + +
Sbjct: 619 -------CKNDEVTLALKMLF-KMMDMGCVPDV---------FTYNTIIFGLVKNGQVKE 661
Query: 294 AKRLFDSLSERNYVVWTALCS---GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
A F + + Y + LC+ G VK+ E +K II N L
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK----------------IITNFLY 705
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV 410
CA Q + IL A A +D ++++E+ D D
Sbjct: 706 NCADQPANLFWEDLIGSIL----------AEAGID-----NAVSFSERLVANGICRDGDS 750
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLK-ISLKPDAITFVALLSACRHRGLVELGEKFFM 469
IL ++ H+ A LF++ K + ++P T+ L+ ++E+ + F+
Sbjct: 751 ILVPIIRYSCKHNNVSG-ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809
Query: 470 SMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
+K +P++ Y ++D YG+ ++++ E +++
Sbjct: 810 QVKST-GCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 45/342 (13%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFI 198
L + N ++ +++A +VF + D ++N L+ Y ++G ++ L+
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 199 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
EM E N T V+S GL +K G AL L D S++ DF
Sbjct: 845 EMSTHECEANTITHNIVIS---GL--VKAGNVDDALDLYYDLMSDR-------DF----- 887
Query: 259 NMRYAESVYAGIGIKSPFATS--SLIAGYSSKGNMTKAKRLFDSLSE----RNYVVWTAL 312
SP A + LI G S G + +AK+LF+ + + N ++ L
Sbjct: 888 ---------------SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 313 CSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTK 372
+G+ K+ + +A LF+ E + PD ++ + + G + +
Sbjct: 933 INGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 373 LNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS---DRDVILYNVMIAGYAHHGFENKA 429
LN D + +++ K + A F + S D+ YN +I G +A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
+++ E+ + L+P+ TF AL+ G E + +M
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/606 (20%), Positives = 264/606 (43%), Gaps = 50/606 (8%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDL 60
N +N ++ KA ++L+D + + +Y +++ Y+ G AL
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKG-GLKVHALCW 244
Query: 61 FARMQSARDTIGM--DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTAND---------LS 109
+M IGM DE+T +L + K R ++ + K + D LS
Sbjct: 245 LGKMSK----IGMQPDEVTTGIVLQMYKKAREF---QKAEEFFKKWSCDENKADSHVCLS 297
Query: 110 KFALSSLIDMYSKCGSFREAYNVFSGC--DGVVD-LVSKNAMVAACCRDGKMDMALNVFW 166
+ +++ID Y K G +EA F +G+V V+ N M+ +G++ ++
Sbjct: 298 SYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM- 356
Query: 167 KNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK 223
K + + DT ++N LI+ + +N +ERA F EM + G++ + + ++L A +
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 224 CLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT---SS 280
++ + + A + ++ +++ S + Y + + + S + + ++ S+
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSA 476
Query: 281 LIAGYSSKGNMTKAKRLF---DSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
I Y +G +++A+R+F +++R + + + Y S+ CE +LF E +
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELF-ESMMSYG 535
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
+ PD ++ A G+ + T D A++ + K G + AE
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 398 KSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
+ ++ + + + DV++Y V+I +A G +A+ + M + + +++ + +L+
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 456 RHRGLVELGEKFFMSMKEDYNVL--PEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDA 513
G ++ E + + + N P++Y CM+++Y + + KA + + +A
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA 715
Query: 514 SIWGAFLNACKINNN------TTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMG 567
+ + + C N T + KQ E +K+ D S Y + ++A +G++ E
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMRE--MKILTDPLS-YNSVLGLFALDGRFKEAV 772
Query: 568 RIRKEM 573
KEM
Sbjct: 773 ETFKEM 778
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 193/474 (40%), Gaps = 79/474 (16%)
Query: 8 SWNAIIMAYIKAHNLTQARALF----DSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++N +I + K +++ +A A F D D VSY ++L A++ + A L A
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE-AEGLIAE 427
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVV----CYGKQMHSYMVKTANDLSKFALSSLIDM 119
M D + +DE T + + + + ++ + K+ H A ++S S+ ID
Sbjct: 428 MDD--DNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH-----VAGNMSSEGYSANIDA 480
Query: 120 YSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNT 179
Y + G EA VF CC++ + +N
Sbjct: 481 YGERGYLSEAERVF-----------------ICCQEVNK-------------RTVIEYNV 510
Query: 180 LIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKND 239
+I Y + E+A LF M+ G+ ++ T +++ G+C + +
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 240 GCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAK 295
S+ ++ + K G + AE VY + I+ LI ++ GN+ +A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 296 RLFDSLSER----NYVVWTALCSGYVKS---QQCEAVF-KLFREFRTTEALIPDTMIIVN 347
+++ E N V++ +L Y K + EA++ KL + T+ PD
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ--YPDVYT--- 685
Query: 348 VLGACAIQ--ATLSLGKQTHAYI--LRTKLNMDEKLASALVDMYSKCG------NIAYAE 397
C I + S+ ++ A ++ + +E + ++ MY K G IA
Sbjct: 686 --SNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 398 KSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVAL 451
+ +++TD + YN ++ +A G +A++ F+EM+ ++PD TF +L
Sbjct: 744 REMKILTDP----LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 189/458 (41%), Gaps = 68/458 (14%)
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS--ACTGLKCLKLGKCVHA 233
++NT+I Y ++G ++ A F M+E+GI T +++ G +LG+
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG----QLGEVTSL 355
Query: 234 LVLKNDGCSNQFVSSGI-VDFYCKCGNMRYAESVYAGI---GIKS-PFATSSLIAGYSSK 288
+ C+ + I + + K ++ A + + + G+K P + +L+ +S +
Sbjct: 356 MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 289 GNMTKAKRLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 344
+ +A+ L + + N + +AL YV+++ E + F+ F
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF------------ 463
Query: 345 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
+V G NM + SA +D Y + G ++ AE+ F
Sbjct: 464 --HVAG-----------------------NMSSEGYSANIDAYGERGYLSEAERVFICCQ 498
Query: 405 D-SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 463
+ + R VI YNVMI Y KA +LF+ M+ + PD T+ L+ +
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 464 GEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDASIWGAFL 520
G + M+E + + Y ++ + + QL A E +++ I+ D ++G +
Sbjct: 559 GRCYLEKMRET-GYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 521 NACKINNNTTLVKQAEE--ELLKVEADNGSR--YVQLANVYAAEGKWNEMGRI-RKEMRG 575
NA N V+QA E +K G+ Y L +Y G +E I RK ++
Sbjct: 618 NAFADTGN---VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS 674
Query: 576 KEATKLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTL 613
T+ P +Y N + S + KA+AI+ ++
Sbjct: 675 CNKTQYPD---VYTSNCMINLYSERSMVRKAEAIFDSM 709
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 220/523 (42%), Gaps = 60/523 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL- 58
N +++N +I + + ++ A AL +V+ +S+L+ Y G D VAL
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
D M DTI T TT++ +G +H+ + +L+D
Sbjct: 104 DQMVEMGYRPDTI-----TFTTLI----------HGLFLHNKASEAV---------ALVD 139
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTV 175
V GC +LV+ +V C+ G +D+A N+ K D V
Sbjct: 140 RM-----------VQRGCQP--NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHAL 234
+NT+I + +++ AL LF EM KGI N T +S++S C+ + + + +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGN 290
+ K N + ++D + K G AE ++ + +S P F +SLI G+
Sbjct: 247 IEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 291 MTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
+ KAK++F+ + ++ + L G+ KS++ E +LFRE + L+ DT+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYT 364
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
++ ++ ++ + D S L+D G + A + F + S
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 407 D--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 464
+ D+ +Y MI G G + LF + +KP+ +T+ ++S + L++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
MKED LP+ Y ++ + R + E +R++
Sbjct: 485 YALLKKMKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 163/432 (37%), Gaps = 81/432 (18%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 197
+L + N ++ CR ++ +AL + K + V+ ++L+ GY + A+ L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
+M+E G + T ++ +H L L N + +V C+
Sbjct: 104 DQMVEMGYRPDTITFTTL---------------IHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALC 313
+ Y ++ G +G++ A L + + E + V++ +
Sbjct: 149 NLVTYG----------------VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
K + + LF+E T + + P+ + +++ S Q + ++ K+
Sbjct: 193 DSLCKYRHVDDALNLFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 374 NMDEKLASALVDMYSKCGNIAYAEK----------------------------------- 398
N + +AL+D + K G AEK
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 399 --SFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR 456
F + D D+ YN +I G+ +LF+EM L D +T+ L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 457 HRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVE---FMRKIPIQIDA 513
H G + +K F M D V P+I Y+ ++D +LEKA+E +M+K I++D
Sbjct: 372 HDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 514 SIWGAFLNA-CK 524
I+ + CK
Sbjct: 431 YIYTTMIEGMCK 442
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 174/409 (42%), Gaps = 60/409 (14%)
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 188
V GC DLV+ A++ C+ G+ D+ALN+ K + D V +NT+I G +
Sbjct: 207 VVKGCQP--DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS 247
+M+ A LF +M KGI+ + T ++S C + + + ++ KN F +
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 248 SGIVDFYCKCGNMRYAESVYAGIGIKSP------FATSSLIAGYSSKGNMTKAKRLFDSL 301
+ ++D + K G + AE +Y + +KS A ++LI G+ + + +F +
Sbjct: 325 A-LIDAFVKEGKLVEAEKLYDEM-VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 302 SER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
S+R N V +T L G+ +++ C+ +F++ ++ + PD M
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPDIMTY------------ 429
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILYNV 415
+ L+D GN+ A F+ + D D++ Y
Sbjct: 430 -----------------------NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
MI G LF + +KP+ +T+ ++S +GL E + F+ MKED
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED- 525
Query: 476 NVLPEIYHYACMVDMYGR-GNQLEKA--VEFMRKIPIQIDASIWGAFLN 521
LP Y ++ R G++ A ++ MR DAS +G N
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 165/377 (43%), Gaps = 24/377 (6%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFI 198
+V+ N+++ C ++ A+ + + E DTV++ TL+ G Q+ A+ L
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 199 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF-----VSSGIVDF 253
M+ KG + + T +V++ K G+ AL L N + + + I+D
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLC-----KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 254 YCKCGNMRYAESVYAGI---GIKSP-FATSSLIAGYSSKGNMTKAKRLFDSLSERN---- 305
CK +M A ++ + GIK F + LI+ + G + A RL + E+N
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V + AL +VK + KL+ E ++ PD + ++ + G +
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDS-DRDVILYNVMIAGYAHH 423
+ + L + + L+ + + + A+ F Q+V+D D++ YN+++ G ++
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G A+ +F+ M K +K D +T+ ++ A G VE G F S+ V P +
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVT 498
Query: 484 YACMVDMYGRGNQLEKA 500
Y M+ + R E+A
Sbjct: 499 YTTMMSGFCRKGLKEEA 515
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 9 WNAIIMAYIKAHNLTQARALFDS---ASH--RDLVSYNSMLSAYAGADGCDTVALDLFAR 63
+NA+I A++K L +A L+D + H D+V+YN+++ + + +++F
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE-GMEVFRE 381
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M S R +G + +T TT+++ + R + + MV + L+D
Sbjct: 382 M-SQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 124 GSFREAYNVF---SGCDGVVDLVSKNAMVAACCRDGKMDMALNVF----WKNPEFNDTVS 176
G+ A VF D +D+V+ M+ A C+ GK++ ++F K + N V+
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN-VVT 498
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA 218
+ T+++G+ + G E A LF+EM E G N T +++ A
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 146/341 (42%), Gaps = 27/341 (7%)
Query: 185 VQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLK----CLKLGKCVHALVLKNDG 240
+Q+ ++ A+ LF +M++ + + +LSA + + LG+ + L + +
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-- 108
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYSSKGNMTKAK 295
N + S ++++C+ + A ++ G G S +SL+ G+ +++A
Sbjct: 109 --NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAV 165
Query: 296 RLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
L D + E Y V +T L G + + L E + PD + V+
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGAVING 224
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD---- 407
+ L + + K+ D + + ++D K + + +F L +
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK---YKHMDDAFDLFNKMETKGI 281
Query: 408 -RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEK 466
DV YN +I+ ++G + A +L +ML+ ++ PD + F AL+ A G + EK
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 467 FFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
+ M + + P++ Y ++ + + ++E+ +E R++
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 17/264 (6%)
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDVI 411
C L K H I + ++D L++MYS CG A F+ + S++++
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKM--SEKNLE 321
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
+ ++I +A +GF AI +F + PD F + AC G V+ G F SM
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNTTL 531
DY + P I Y +V+MY L++A+EF+ ++P++ + +W +N +++ N L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 532 VKQAEE--ELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEATKLPGCSWIYV 589
E E L N V A++ + KE K + L G V
Sbjct: 442 GDYCAEVVEFLDPTRLNKQSREGFIPVKASD--------VEKESLKKRSGILHG-----V 488
Query: 590 ENGIHVFTSGDTSHSKADAIYSTL 613
++ + F +GDT+ + D ++ L
Sbjct: 489 KSSMQEFRAGDTNLPENDELFQLL 512
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 210/526 (39%), Gaps = 129/526 (24%)
Query: 1 MPHRNAFSWNAIIMAYIKA-HNLTQARALF----DSASHRDLVSYNSMLSAYAGADGCDT 55
MP S+NA++ A I++ N++ A +F +S ++ +YN ++ + A D
Sbjct: 166 MP--GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID- 222
Query: 56 VALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSS 115
VAL LF +M++ + +T T+++ KLR + G ++ L AL
Sbjct: 223 VALTLFDKMETKGCLPNV--VTYNTLIDGYCKLRKIDDGFKL----------LRSMALKG 270
Query: 116 LIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN--- 172
L +L+S N ++ CR+G+M V + E N
Sbjct: 271 LEP----------------------NLISYNVVINGLCREGRMK---EVSFVLTEMNRRG 305
Query: 173 ---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGK 229
D V++NTLI GY + G +AL + EM+ G+ + T S+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL-------------- 351
Query: 230 CVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK----SPFATSSLIAGY 285
+H++ CK GNM A + ++ + ++L+ G+
Sbjct: 352 -IHSM--------------------CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 286 SSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
S KG M +A R+ +++ + V + AL +G+ + + E + + + + L PD
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-KGLSPD 449
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 401
+ VL + LR K M EK
Sbjct: 450 VVSYSTVLSGFCRSYDVDEA-------LRVKREMVEKGIKP------------------- 483
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
D I Y+ +I G+ +A L++EML++ L PD T+ AL++A G +
Sbjct: 484 -------DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 462 ELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
E + M E VLP++ Y+ +++ + ++ +A + K+
Sbjct: 537 EKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 207/503 (41%), Gaps = 79/503 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N S+N +I + + + + + R D V+YN+++ Y +G AL +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC-KEGNFHQALVM 332
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
A M R + IT T++++ K + + M ++ ++L+D +
Sbjct: 333 HAEM--LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 121 SKCGSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDT 174
S+ G EAY V + +V+ NA++ C GKM+ A+ V E D
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
VS++T+++G+ ++ ++ AL + EM+EKGI+ + T +S++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ----------------- 493
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
G Q + D Y E + G+ F ++LI Y +G++ KA
Sbjct: 494 -----GFCEQRRTKEACDLY--------EEMLRVGLP-PDEFTYTALINAYCMEGDLEKA 539
Query: 295 KRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLG 350
+L + + E+ + V ++ L +G K + +L + E+ +P + ++
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES-VPSDVTYHTLIE 598
Query: 351 ACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDR 408
C+ N++ K +L+ + G + A++ F+ L +
Sbjct: 599 NCS--------------------NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638
Query: 409 DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG--------L 460
D YN+MI G+ G KA L++EM+K +T +AL+ A G +
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 461 VELGEKFFMSMKEDYNVLPEIYH 483
V + +S E VL EI H
Sbjct: 699 VHVLRSCELSEAEQAKVLVEINH 721
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 202/481 (41%), Gaps = 69/481 (14%)
Query: 20 HNL--TQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGM 73
HNL A LF H ++ + +LS A + D V + LF +MQ +G+
Sbjct: 60 HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYD-VVISLFEQMQ----ILGI 114
Query: 74 DEITLTTMLNL------SAKLRVVCY-GKQMHSYMVKTANDLSKFALSSLIDMYSKCGSF 126
+ T + + S R C+ GK M+K + +SL++ Y
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGK-----MMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 127 REAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTVSWNTL 180
+A +F G+ ++V+ ++ C++ ++ A+ +F + N + V++N L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 181 IAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDG 240
+ G + G A L +M+++ IE N T +++ A +K+GK + A L N
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF-----VKVGKLMEAKELYN-- 282
Query: 241 CSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDS 300
+ SVY + F SLI G G + +A+++F
Sbjct: 283 -------------------VMIQMSVYPDV-----FTYGSLINGLCMYGLLDEARQMF-Y 317
Query: 301 LSERN-----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQ 355
L ERN V++T L G+ KS++ E K+F E + + ++ +T+ ++ +
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLV 376
Query: 356 ATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRDV--ILY 413
+ ++ + + D + + L+D G + A F+ + + D+ + Y
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
++I G G A LF + +KP+ IT+ ++S RGL+ + F MKE
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 474 D 474
D
Sbjct: 497 D 497
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 209/495 (42%), Gaps = 58/495 (11%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYA-GADGCDTVAL- 58
N +++N +I + + ++ A AL +V+ +S+L+ Y G D VAL
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
D M DTI T TT++ +G +H+ + +L+D
Sbjct: 179 DQMVEMGYRPDTI-----TFTTLI----------HGLFLHNKASEAV---------ALVD 214
Query: 119 MYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTV 175
V GC +LV+ +V C+ G +D+A N+ K + V
Sbjct: 215 RM-----------VQRGCQP--NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++T+I + + + AL LF EM KG+ N T +S++S + + + +
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKS--P--FATSSLIAGYSSKGNM 291
++ N + ++D + K G + AE +Y + +S P F SSLI G+ +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 292 TKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
+AK +F+ + + N V + L +G+ K+++ + +LFRE + L+ +T+
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTT 440
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS- 406
++ + ++ ++ + + L+D K G + A F+ + S
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 407 -DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
+ + YN+MI G G LF + +KPD I + ++S +GL E +
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 466 KFFMSMKEDYNVLPE 480
F M+ED LP+
Sbjct: 561 ALFRKMRED-GPLPD 574
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 176/402 (43%), Gaps = 20/402 (4%)
Query: 132 VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNG 188
V GC DLV+ A++ C+ G+ D+ALN+ K + D V ++T+I +
Sbjct: 197 VVKGCQP--DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSS 248
+++ AL LF EM KGI + T +S++S + + +L+ N +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 249 GIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER 304
++D + K G + AE ++ + I T +SLI G+ + +A+++F + +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 305 N----YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSL 360
+ V + L +G+ K+++ +LFR+ + L+ +T+ ++ +
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 361 GKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIA 418
+ ++ ++ + + L+D K G + A F+ + S + D+ YN+M
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVL 478
G G LF + +KPD I + ++S +GL E F+ MKED L
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPL 552
Query: 479 PEIYHYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWG 517
P+ Y ++ + R + E MR DAS +G
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 48/259 (18%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N ++N++I A+ K L +A LFD R ++V+YNS+++ + D D A +
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE-AQQI 367
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
F M S +D + D +T T++N K + V G ++ M + + ++LI +
Sbjct: 368 FTLMVS-KDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 121 SKCGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMALNVFW------KNPEF 171
+ A VF DGV ++++ N ++ C++GK++ A+ VF P+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 172 --------------------------------NDTVSWNTLIAGYVQNGYMERALTLFIE 199
D +++NT+I+G+ + G E A TLFI+
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 200 MIEKGIEYNQHTLASVLSA 218
M E G + T +++ A
Sbjct: 546 MKEDGPLPDSGTYNTLIRA 564
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 163/392 (41%), Gaps = 63/392 (16%)
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFI 198
+V+ N+++ C ++ A+ + + E DTV++ TL+ G Q+ A+ L
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 199 EMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF-----VSSGIVDF 253
M+ KG + + T +V++ K G+ AL L N + + S ++D
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLC-----KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 254 YCKCGNMRYAESVYAGI---GIKSP-FATSSLIAGYSSKGNMTKAKRLFDSLSER----N 305
CK ++ A +++ + GI+ F SSLI+ + G + A RL + ER N
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V + +L + K + KLF E IQ ++ T+
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEM---------------------IQRSIDPNIVTY 348
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHH 423
++L++ + + A++ F L+ D DV+ YN +I G+
Sbjct: 349 ---------------NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
++LF++M + L + +T+ L+ + + F M D V P I
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMT 452
Query: 484 YACMVDMYGRGNQLEKAV---EFMRKIPIQID 512
Y ++D + +LEKA+ E+++K ++ D
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 133/577 (23%), Positives = 232/577 (40%), Gaps = 85/577 (14%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVAL 58
+ + F +N +I K + A LFD R L++YN+++ Y A G +
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA-GNPEKSF 269
Query: 59 DLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLID 118
+ RM++ D I IT T+L K +V + + M F S L D
Sbjct: 270 KVRERMKA--DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Query: 119 MYSKCGSFREAYNVF-SGCDGVVDL--VSKNAMVAACCRDGKMDMALNVFWKNPE---FN 172
YS A V+ + D V + + + ++ A C++GK++ A + +
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVH 232
+ V +NT+I GY + G + A + IE +EK G+K
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK----------------QGMK--------- 421
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SPFATSS--LIAGYSSK 288
+ + ++ +C+ G M AE + +K SP + LI GY K
Sbjct: 422 ---------PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 289 GNMTKA----KRLFDSLSERNYVVW----TALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
K K + D+ + N V + LC G S+ EA ++ + + P
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG---SKLLEA--QIVKRDMEDRGVSP 527
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
I ++ C + + + +L+ + ++ + L+D S G ++ AE
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 401 QLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
++ DV YN +I+GY G + I L++EM + +KP T+ L+S C
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647
Query: 459 GLVELGEKFF--MSMKEDYNVLPEIYH-YACMVDMYGRGNQLEKAVEFMRKI---PIQID 512
G +EL E+ F MS+K D V + H YA DM EKA +++ I +D
Sbjct: 648 G-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM-------EKAFNLQKQMIEKSIGLD 699
Query: 513 ASIWGAF----LNACKINNNTTLVKQAEEELLKVEAD 545
+ + + L K+ +L+ + ++ EAD
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 28/357 (7%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 197
D+V+ ++++ C+ ++ A+++ K E D V +NT+I G + G + A+ LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 198 IEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
M G+ + T S+++ C + + + +V++ D N + ++D + K
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVK 256
Query: 257 CGNMRYAESVYAGIGIK--SP--FATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVV 308
G A +Y + + P F +SLI G G + +AK++ D + + + V
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
+ L +G+ KS++ + KLFRE L+ DT I N + IQ G+ A
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDT-ITYNTI----IQGYFQAGRPDAAQE 370
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR-----DVILYNVMIAGYAHH 423
+ ++++ + + + +Y C N EK+ L + + D+ YN++I G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMN-WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLP 479
G A LF+ + LKPD +++ ++S CR R + + + M+ED +LP
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW-DKSDLLYRKMQED-GLLP 484
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 64/332 (19%)
Query: 250 IVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERN 305
+++ C+C A SV + G + T SSLI G+ + A L + E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 306 Y----VVWTALCSGYVKSQQCEAVFKLF----REFRTTEALIPDTMIIVNVLGACAIQAT 357
+ V++ + G K +LF R+ +A+ +++ V G C
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL----VAGLCC---- 221
Query: 358 LSLGKQTHAYILRTKLNMDEKLA-----SALVDMYSKCGNIAYAEKSFQLVTDS--DRDV 410
G+ + A L + M + + +A++D++ K G + A K ++ +T D DV
Sbjct: 222 --SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMS 470
YN +I G HG ++A Q+ M+ PD +T+ L++ V+ G K F
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 471 MKE--------DYNVLPEIYHYACMVD--------MYGRGN---------------QLEK 499
M + YN + + Y A D M R N ++EK
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 500 AV---EFMRKIPIQIDASIWGAFLNA-CKINN 527
A+ E M+K I++D + + ++ CKI N
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/522 (19%), Positives = 209/522 (40%), Gaps = 63/522 (12%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGC--DTVALDLF 61
++N ++ Y K A L D + D+ +YN ++ D C + +A
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH-----DLCRSNRIAKGYL 324
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
+ I +E+T T++N + V Q+ + M+ + ++LID +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 122 KCGSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGKMDMALNVFWK---NPEFNDTV 175
G+F+EA +F + VS ++ C++ + D+A + + N +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++ +I G +NG+++ A+ L EM + GI+ + T +++++ + K K + +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI----KSPFATSSLIAGYSSKGNM 291
+ N + S ++ C+ G ++ A +Y + + + F + L+ G +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 292 TKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVN 347
+A+ ++ N V + L +GY S + F +F E
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE---------------- 608
Query: 348 VLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV--TD 405
+ K H T +L+ K G++ AEK + +
Sbjct: 609 ------------MTKVGHHPTFFT--------YGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 406 SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE 465
+ D ++YN ++ G KA+ LF EM++ S+ PD+ T+ +L+S +G +
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 466 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
F + NVLP Y C VD + Q + + F ++
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 204/504 (40%), Gaps = 63/504 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDL----VSYNSMLSAYAGADG-CDTVALD 59
N ++NA+I +I N +A +F + L VSY +L DG C D
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL------DGLCKNAEFD 425
Query: 60 LFAR---MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
L AR M+ R+ + + IT T M++ K + + + M K D S+L
Sbjct: 426 L-ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 117 IDMYSKCGSFREA-------YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK-- 167
I+ + K G F+ A Y V +G++ + ++ CCR G + A+ ++
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGII----YSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 168 -NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS----ACTGL 222
D ++N L+ + G + A M GI N + +++ + GL
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAE----SVYAGIGIKSPFAT 278
K V + K F ++ CK G++R AE S++A
Sbjct: 601 KAFS----VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRT 334
++L+ GN+ KA LF + +R+ + +T+L SG + + +E
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN-----MDEKLASALVDMYSK 389
++P+ V+ C + G+ R +++ D +A++D YS+
Sbjct: 717 RGNVLPN-----KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 390 CGNIAYAEKSFQLVTD-----SDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPD 444
G I EK+ L+ + ++ YN+++ GY+ + + L++ ++ + PD
Sbjct: 772 MGKI---EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 445 AITFVALLSACRHRGLVELGEKFF 468
+T +L+ ++E+G K
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKIL 852
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 203/503 (40%), Gaps = 76/503 (15%)
Query: 3 HRNAFSWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYAGADGCDTVAL 58
H F++ +++ K +L +A S + D V YN++L+A + G A+
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAV 673
Query: 59 DLFARMQSARDTIGMDEITLTTMLN-LSAKLRVVC---YGKQMHSYMVKTANDLSKFALS 114
LF M + +I D T T++++ L K + V + K+ + N K +
Sbjct: 674 SLFGEM--VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN---KVMYT 728
Query: 115 SLIDMYSKCGSFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 171
+D K G ++ D + D+V+ NAM+ R GK++ ++ PE
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL---PEM 785
Query: 172 NDT------VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS-VLSAC----- 219
+ ++N L+ GY + + + L+ +I GI ++ T S VL C
Sbjct: 786 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 845
Query: 220 -TGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYA---ESVYAGIGIKSP 275
GLK LK C V +++ + ++ C G + +A V +GI
Sbjct: 846 EIGLKILKAFICRGVEV-------DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 276 FATSSLIAGYSSKGNMTKAKRLF--------DSLSERNYV-VWTALCS-GYVKSQQCEAV 325
T + ++ + + R+ S R Y+ + LC G +K+
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA----- 953
Query: 326 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHA-----YILRTKLNMDEKLA 380
F E +I + NV + ++A GK A ++L+ KL
Sbjct: 954 ------FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 1007
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLK 438
+ L+ + K GN+ A + ++++ D++ YNV+I G G A +L++EM
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067
Query: 439 ISLKPDAITFVALLSACRHRGLV 461
+A T+ AL+ RGL+
Sbjct: 1068 DGFLANATTYKALI-----RGLL 1085
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 208/490 (42%), Gaps = 64/490 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDS--ASH-----RDLVSYNSMLSAYAGADGCDTVA 57
+ S+N++I + + ++ A + +S ASH D+VS+NS+ + ++ D V
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV- 148
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNL---SAKLRVVCYGKQMHSYMVKTANDLSKFALS 114
F M + +T +T ++ S +L++ K HS M + A + +
Sbjct: 149 ---FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL--KSFHS-MKRDALSPNVVTFT 202
Query: 115 SLIDMYSKCGSFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEF 171
LID Y K G A +++ V +++V+ A++ C+ G+M A ++ + E
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 172 N---DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
+++ + T+I G+ Q G + A+ +M+ +G+ + ++S G LK
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 229 KCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPF-----ATSSLIA 283
+ + K+D + + + +++ Y K G M+ A ++Y + I+ F A S++I
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL-IERGFEPDVVALSTMID 381
Query: 284 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 343
G + G + +A F + + N V++T L K V +LF + + L+PD
Sbjct: 382 GIAKNGQLHEAIVYF-CIEKANDVMYTVLIDALCKEGDFIEVERLFSKI-SEAGLVPDKF 439
Query: 344 IIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLV 403
+ + + Q L A+ L+T++ + L
Sbjct: 440 MYTSWIAGLCKQGNL-----VDAFKLKTRMVQEGLLL----------------------- 471
Query: 404 TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 463
D++ Y +I G A G +A Q+F EML + PD+ F L+ A G +
Sbjct: 472 -----DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 464 GEKFFMSMKE 473
+ M+
Sbjct: 527 ASDLLLDMQR 536
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 165/370 (44%), Gaps = 42/370 (11%)
Query: 144 SKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIEM 200
S N++V+ C+ G++ A ++ P F D +S+N+LI G+ +NG + R+ +L +E
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI-RSASLVLES 116
Query: 201 IEKGIEY----NQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYC 255
+ + + + S+ + + +K L ++LK CS V+ S +D +C
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDTFC 174
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
K G ++ A + + KR D+LS N V +T L G
Sbjct: 175 KSGELQLALKSFHSM------------------------KR--DALSP-NVVTFTCLIDG 207
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
Y K+ E L++E R + + G C + + ++ ++ ++ ++
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK-KGEMQRAEEMYSRMVEDRVEP 266
Query: 376 DEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDR-DVILYNVMIAGYAHHGFENKAIQLF 433
+ + + ++D + + G+ A K +++ R D+ Y V+I+G +G +A ++
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 434 QEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR 493
++M K L PD + F +++A G ++ + + E P++ + M+D +
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE-RGFEPDVVALSTMIDGIAK 385
Query: 494 GNQLEKAVEF 503
QL +A+ +
Sbjct: 386 NGQLHEAIVY 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 131/303 (43%), Gaps = 44/303 (14%)
Query: 248 SGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSE 303
+ +V F CK G +++AE + + G + + +SLI G+ G++ A + +SL
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 304 RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQ 363
+ G++ + LF F + ++ + + + V+ C ++
Sbjct: 120 SH---------GFICKPDIVSFNSLFNGFSKMK-MLDEVFVYMGVMLKCCSPNVVTY--- 166
Query: 364 THAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYA 421
S +D + K G + A KSF + +V+ + +I GY
Sbjct: 167 -----------------STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 422 HHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEI 481
G A+ L++EM ++ + + +T+ AL+ +G ++ E+ + M ED V P
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNS 268
Query: 482 YHYACMVDMYGRGNQLEKAVEFMRKI---PIQIDASIWGAFLNAC----KINNNTTLVKQ 534
Y ++D + + + A++F+ K+ +++D + +G ++ K+ T +V+
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 535 AEE 537
E+
Sbjct: 329 MEK 331
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 218/525 (41%), Gaps = 71/525 (13%)
Query: 112 ALSSLIDMYSKCGSFREAYNVFSGCD--GV-VDLVSKNAMVAACCRDGKMDMA---LNVF 165
A ++LI + G A+ V+ GV +++ + N MV A C+DGKM+ L+
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 166 WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCL 225
+ + D V++NTLI+ Y G ME A L M KG +T +V++
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 226 KLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT----SSL 281
+ K V A +L++ + ++ CK G++ E V++ + + SS+
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 282 IAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVK---------------SQQC 322
++ ++ GN+ KA F+S+ E + V++T L GY + Q C
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 323 E--------------------AVFKLFREFRTTEALIPDTMIIVNVL-GACAIQATLSLG 361
KLF E T AL PD+ + ++ G C + L
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKL-GNLQNA 499
Query: 362 KQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAG 419
+ + ++ +D + L+D + K G+I A++ + + + I Y++++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
G +A +++ EM+ ++KP + +++ G GE F M + +P
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVP 618
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIP-----IQIDASIWGAFLNA-CKINNNTTLVK 533
+ Y ++ + R + KA ++K+ + D + + L+ C+ N +K
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ----MK 674
Query: 534 QAEEELLK-----VEADNGSRYVQLANVYAAEGKWNEMGRIRKEM 573
+AE L K V D S Y + N + ++ E RI EM
Sbjct: 675 EAEVVLRKMIERGVNPDR-STYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 112/513 (21%), Positives = 226/513 (44%), Gaps = 38/513 (7%)
Query: 161 ALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACT 220
+L+ + N ND+V ++ LI YVQ + A F + KG + +++ +
Sbjct: 153 SLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLV 211
Query: 221 GLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFA 277
+ ++L V+ + ++ N + + +V+ CK G M + + + G+
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 278 T-SSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREF 332
T ++LI+ YSSKG M +A L +++ + + + + +G K + E ++F E
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 333 RTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN 392
+ L PD+ ++L + + ++ + + + D S+++ ++++ GN
Sbjct: 332 LRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 393 IAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVA 450
+ A F V ++ D ++Y ++I GY G + A+ L EML+ D +T+
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 451 LLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP-- 508
+L R ++ +K F M E + P+ Y ++D + + L+ A+E +K+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 509 -IQIDASIWGAFLNACKINNNTTLVKQAEEELLKVEA-DNGSRYVQLANVYAAEGKWNEM 566
I++D + L+ + K+ +++ E Y L N ++G E
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 567 GRIRKEMRGK--EATKLPGCSWI--YVENGIHVFTSGDTSHSK-------ADAI-YSTLV 614
R+ EM K + T + S I Y +G + G++ K D I Y+TL+
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNA--SDGESFLEKMISEGFVPDCISYNTLI 627
Query: 615 CLYG-----KLYLTFTELKQLDEIQGNIVADIF 642
YG + F +K+++E QG +V D+F
Sbjct: 628 --YGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 200/506 (39%), Gaps = 79/506 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
N ++ N ++ A K + + + D+V+YN+++SAY+ + G A +L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS-SKGLMEEAFEL 292
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
M + G+ T T++N K K++ + M+++ SL+
Sbjct: 293 MNAMPGKGFSPGV--YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 121 SKCGSFREAYNVFSGC---DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDT 174
K G E VFS D V DLV ++M++ R G +D AL F E D
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
V + LI GY + G + A+ L EM+++G + T ++L K L +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYA-------------------GIG---- 271
+ + + + + ++D +CK GN++ A ++ G G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 272 ----------------IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCS- 314
+ +P + S L+ SKG++ +A R++D + +N +C+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 315 ---GYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRT 371
GY +S + F E +E +PD I N L I + + A+ L
Sbjct: 591 MIKGYCRSGNASD-GESFLEKMISEGFVPDC-ISYNTL----IYGFVREENMSKAFGLVK 644
Query: 372 KLNMDEKLASALVDMYS---------KCGNIAYAE----KSFQLVTDSDRDVILYNVMIA 418
K M+E+ + D+++ + + AE K + + DR Y MI
Sbjct: 645 K--MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST--YTCMIN 700
Query: 419 GYAHHGFENKAIQLFQEMLKISLKPD 444
G+ +A ++ EML+ PD
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 127/281 (45%), Gaps = 21/281 (7%)
Query: 343 MIIVNVLGA---CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKS 399
M ++ +LG C L + H I+ D +A+++MYS C ++ A K
Sbjct: 117 MDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKV 176
Query: 400 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
F+ + + + + VM+ + ++G+ +AI LF + KP+ F + S C G
Sbjct: 177 FEEMPEWNSGTLC--VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTG 234
Query: 460 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASIWGAF 519
V+ G F +M +Y ++P + HY + M L++A+ F+ ++P++ +W
Sbjct: 235 DVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETL 294
Query: 520 LNACKINNNTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKEAT 579
+N +++ + L + E + K++A +R ++++ K ++ + R +
Sbjct: 295 MNLSRVHGDVELGDRCAELVEKLDA---TRLDKVSSAGLVATKASDFVKKEPSTRSE--- 348
Query: 580 KLPGCSWIYVENGIHVFTSGDTSHSKADAIYSTLVCLYGKL 620
+ Y F D+SH + + IY TL+ L +L
Sbjct: 349 -----PYFY-----STFRPVDSSHPQMNIIYETLMSLRSQL 379
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKC 230
D +S++T++ GY + G +++ L M KG++ N + S++ GL C KL +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII----GLLCRICKLAEA 335
Query: 231 VHAL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SP--FATSSLIAG 284
A +++ + V + ++D +CK G++R A + + + +P +++I+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 285 YSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
+ G+M +A +LF + E + V +T L +GY K+ + F++ P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSP 454
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
+ + ++ + L + + + L + +++V+ K GNI E++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAV 511
Query: 401 QLVTDSDR-----DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA- 454
+LV + + D + Y ++ Y G +KA ++ +EML L+P +TF L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 455 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
C H G++E GEK M + P + +V Y N L+ A
Sbjct: 572 CLH-GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 44/396 (11%)
Query: 124 GSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDG-KMDMALNVFWKNPEFN---DTVS 176
G REA VF V+ + S N + +D K A+ VF + PE + S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALV 235
+N +I Q G ++ A L + M KG + + ++V++ C + K+ K + V
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE--V 306
Query: 236 LKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
+K G N ++ I+ C+ + AE ++ M +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS---------------------EMIRQ 345
Query: 295 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACA 353
L D+ VV+T L G+ K A K F E + + + PD + ++ G C
Sbjct: 346 GILPDT------VVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQ 398
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKSFQLVTDSDRDVI 411
I + GK H + L D + L++ Y K G++ A+ + + +V+
Sbjct: 399 IGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
Y +I G G + A +L EM KI L+P+ T+ ++++ G +E K
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
E + + Y ++D Y + +++KA E ++++
Sbjct: 518 -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 157/368 (42%), Gaps = 50/368 (13%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDLFARM 64
+ +I + K ++ A F RD+ ++Y +++S + G A LF M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI-GDMVEAGKLFHEM 412
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D +T T ++N K + ++H++M++ + ++LID K G
Sbjct: 413 FCK--GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 125 SFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------DTV 175
A + + ++ + N++V C+ G ++ A+ + EF DTV
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV---GEFEAAGLNADTV 527
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++ TL+ Y ++G M++A + EM+ KG+ Q T+ + L G C+H ++
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVT-------FNVLMNGFCLHGML 577
Query: 236 LKNDGCSNQFVSSGI----------VDFYCKCGNMRYAESVYA-----GIGIKSPFATSS 280
+ N ++ GI V YC N++ A ++Y G+G +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK-TYEN 636
Query: 281 LIAGYSSKGNMTKAKRLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTE 336
L+ G+ NM +A LF + + + V ++ L G++K ++ ++F + R E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR-RE 695
Query: 337 ALIPDTMI 344
L D I
Sbjct: 696 GLAADKEI 703
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 50/318 (15%)
Query: 147 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
++ C+ + + A + + DTV + TLI G+ + G + A F EM + I
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 207 YNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAE 264
+ T +++S C ++ GK H + K G V+ + +++ YCK G+M+ A
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 265 SVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL----SERNYVVWTALCSGY 316
V+ + G T ++LI G +G++ A L + + N + ++ +G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
KS E KL EF LN D
Sbjct: 502 CKSGNIEEAVKLVGEFEA------------------------------------AGLNAD 525
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
+ L+D Y K G + A++ + L ++ +NV++ G+ HG +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 435 EMLKISLKPDAITFVALL 452
ML + P+A TF +L+
Sbjct: 586 WMLAKGIAPNATTFNSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKC--LKLGKC 230
D +S++T++ GY + G +++ L M KG++ N + S++ GL C KL +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII----GLLCRICKLAEA 335
Query: 231 VHAL--VLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK--SP--FATSSLIAG 284
A +++ + V + ++D +CK G++R A + + + +P +++I+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 285 YSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
+ G+M +A +LF + E + V +T L +GY K+ + F++ P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSP 454
Query: 341 DTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSF 400
+ + ++ + L + + + L + +++V+ K GNI E++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAV 511
Query: 401 QLVTDSDR-----DVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA- 454
+LV + + D + Y ++ Y G +KA ++ +EML L+P +TF L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 455 CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
C H G++E GEK M + P + +V Y N L+ A
Sbjct: 572 CLH-GMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 44/396 (11%)
Query: 124 GSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDG-KMDMALNVFWKNPEFN---DTVS 176
G REA VF V+ + S N + +D K A+ VF + PE + S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALV 235
+N +I Q G ++ A L + M KG + + ++V++ C + K+ K + V
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE--V 306
Query: 236 LKNDGC-SNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKA 294
+K G N ++ I+ C+ + AE ++ M +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS---------------------EMIRQ 345
Query: 295 KRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL-GACA 353
L D+ VV+T L G+ K A K F E + + + PD + ++ G C
Sbjct: 346 GILPDT------VVYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQ 398
Query: 354 IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI--AYAEKSFQLVTDSDRDVI 411
I + GK H + L D + L++ Y K G++ A+ + + +V+
Sbjct: 399 IGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 412 LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSM 471
Y +I G G + A +L EM KI L+P+ T+ ++++ G +E K
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 472 KEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
E + + Y ++D Y + +++KA E ++++
Sbjct: 518 -EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 157/368 (42%), Gaps = 50/368 (13%)
Query: 9 WNAIIMAYIKAHNLTQARALFDSASHRDL----VSYNSMLSAYAGADGCDTVALDLFARM 64
+ +I + K ++ A F RD+ ++Y +++S + G A LF M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI-GDMVEAGKLFHEM 412
Query: 65 QSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 124
+ D +T T ++N K + ++H++M++ + ++LID K G
Sbjct: 413 FCK--GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 125 SFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN------DTV 175
A + + ++ + N++V C+ G ++ A+ + EF DTV
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV---GEFEAAGLNADTV 527
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
++ TL+ Y ++G M++A + EM+ KG+ Q T+ + L G C+H ++
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVT-------FNVLMNGFCLHGML 577
Query: 236 LKNDGCSNQFVSSGI----------VDFYCKCGNMRYAESVYA-----GIGIKSPFATSS 280
+ N ++ GI V YC N++ A ++Y G+G +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK-TYEN 636
Query: 281 LIAGYSSKGNMTKAKRLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTE 336
L+ G+ NM +A LF + + + V ++ L G++K ++ ++F + R E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR-RE 695
Query: 337 ALIPDTMI 344
L D I
Sbjct: 696 GLAADKEI 703
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 50/318 (15%)
Query: 147 AMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIE 206
++ C+ + + A + + DTV + TLI G+ + G + A F EM + I
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 207 YNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYAE 264
+ T +++S C ++ GK H + K G V+ + +++ YCK G+M+ A
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 265 SVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSL----SERNYVVWTALCSGY 316
V+ + G T ++LI G +G++ A L + + N + ++ +G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 317 VKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMD 376
KS E KL EF LN D
Sbjct: 502 CKSGNIEEAVKLVGEFEA------------------------------------AGLNAD 525
Query: 377 EKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
+ L+D Y K G + A++ + L ++ +NV++ G+ HG +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 435 EMLKISLKPDAITFVALL 452
ML + P+A TF +L+
Sbjct: 586 WMLAKGIAPNATTFNSLV 603
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/527 (22%), Positives = 221/527 (41%), Gaps = 53/527 (10%)
Query: 91 VCYGKQMHSYMVKTAND---------LSKFALSSLIDM---YSKCGSFREAYNVFSGC-- 136
VC+ +++ S +V D + L SL+D +S ++ V C
Sbjct: 54 VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 137 ---DGVV-DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGY 189
+G+ ++ + N M+ CR K A +V K + DT ++NTLI G G
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQ 244
+ A+ L M+E G + + T S++ S T L L L + + +K D
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA-LDLLRKMEERNVKAD----V 228
Query: 245 FVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDS 300
F S I+D C+ G + A S++ + GIKS T +SL+ G G L
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 301 LSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQA 356
+ R N + + L +VK + + +L++E T + P+ + ++ +Q
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQN 347
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYN 414
LS ++R K + D ++L+ Y + K F+ ++ + + Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
+++ G+ G A +LFQEM+ + PD +T+ LL G +E + F +++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 475 YNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDASIWGAFLNA-CK---INN 527
L I Y +++ +G ++E A +P ++ + + ++ CK ++
Sbjct: 468 KMDLG-IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 528 NTTLVKQAEEELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
L+++ EE+ A N Y L + +G ++ +EM+
Sbjct: 527 ANILLRKMEED---GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 205/463 (44%), Gaps = 31/463 (6%)
Query: 76 ITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS- 134
IT +T++N V ++ MV+ + +++L++ G EA +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 135 ----GCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQN 187
GC + V+ ++ C+ G+ +A+ + K E N D V ++ +I G ++
Sbjct: 219 MVEYGCQP--NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFV 246
G ++ A LF EM KGI N T ++ C + K + ++ K N
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNVVT 335
Query: 247 SSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLS 302
S ++D + K G +R AE ++ + GI T +SLI G+ + ++ KA ++ D +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 303 ER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL--GACAIQA 356
+ N + L +GY K+ + + +LFR+ + ++ DT + N L G C +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADT-VTYNTLIQGFCEL-G 452
Query: 357 TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYN 414
L++ K+ ++ K+ + L+D G A + F+ + S + D+ +YN
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 415 VMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKED 474
++I G + + A LF + +KP T+ ++ +G + E F M+ED
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 475 YNVLPEIYHYACMVDMY---GRGNQLEKAVEFMRKIPIQIDAS 514
+ P+ + Y ++ + G + K +E +++ +DAS
Sbjct: 573 GHA-PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 211/491 (42%), Gaps = 50/491 (10%)
Query: 29 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 88
F + S R+L + S D A+DLF M +R + I + + + AK
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADD--AIDLFRDMIHSRPLPTV--IDFSRLFSAIAKT 101
Query: 89 R----VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGVVDL-- 142
+ V+ KQM + A++L + LS +I+ + +C R+ FS ++ L
Sbjct: 102 KQYDLVLALCKQME--LKGIAHNL--YTLSIMINCFCRC---RKLCLAFSAMGKIIKLGY 154
Query: 143 ----VSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALT 195
++ + ++ C +G++ AL + + E D ++ NTL+ G +G A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 196 LFIEMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGI 250
L +M+E G + N T VL S T L ++L + + +K D S I
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIKLDAVK----YSII 269
Query: 251 VDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER-- 304
+D CK G++ A +++ + GI + T + LI G+ + G +L + +R
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 305 --NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGK 362
N V ++ L +VK + +L +E + PDT+ +++ + L
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 363 QTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGY 420
Q ++ + + + + L++ Y K I + F+ ++ D + YN +I G+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG----LVELGEKFFMS-MKEDY 475
G N A +LFQEM+ + P+ +T+ LL G +E+ EK S M+ D
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 476 NVLPEIYHYAC 486
+ I H C
Sbjct: 509 GIYNIIIHGMC 519
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 183/433 (42%), Gaps = 25/433 (5%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYN-- 131
D +TL+++LN + + + MV+ F ++LI EA
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 132 ---VFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYV 185
V GC DLV+ +V C+ G +D+ALN+ K + V +NT+I
Sbjct: 212 DQMVQRGCQP--DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 186 QNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQF 245
+ ++E A+ LF EM KGI N T S+++ + + +L+ N
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 246 VSSGIVDFYCKCGNMRYAESVYAGIGIKS----PFATSSLIAGYSSKGNMTKAKRLFDSL 301
+ ++D + K G + AE ++ + +S + LI G+ + +AK++F +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 302 SER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
+ N + L +G+ K ++ E +LFRE + L+ +T+ ++
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 358 LSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDRD--VILYNV 415
+ ++ ++ D S L+ G + A F+ + S+ + + +YN
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 416 MIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDY 475
MI G G +A LF +S+KPD +T+ ++S + L++ + F MKED
Sbjct: 509 MIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED- 564
Query: 476 NVLPEIYHYACMV 488
LP Y ++
Sbjct: 565 GTLPNSGTYNTLI 577
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 141/342 (41%), Gaps = 41/342 (11%)
Query: 141 DLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLF 197
DL + + + CR ++ +AL V K + D V+ ++L+ GY + + A+ L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 198 IEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKC 257
+M+E G + + T ++ +H L L N + +V C+
Sbjct: 177 DQMVEMGYKPDTFTFTTL---------------IHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 258 GNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALC 313
+ Y +++ G +G++ A L + + + N V++ +
Sbjct: 222 DLVTYG----------------TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
K + E LF E T + + P+ + +++ S + + +L K+
Sbjct: 266 DSLCKYRHVEVAVDLFTEMET-KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQ 431
N + +AL+D + K G + AEK + + D D I YN++I G+ H ++A Q
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 432 LFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKE 473
+F+ M+ P+ T+ L++ VE G + F M +
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLV----SYNSMLSAYAGADGCDTVALDL 60
N ++N +I + K + LF S R LV +Y +++ + A CD+ + +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM-V 455
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVC-YGKQ-----MHSYMVKTANDLSKFALS 114
F +M S R T ++ S L +C YGK + Y+ K+ +L+ F +
Sbjct: 456 FKQMVSNR--------VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 115 SLIDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE---F 171
++I+ K G EA+++F D+V+ N M++ C + A ++F K E
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 172 NDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASV 215
++ ++NTLI +++ + L EM G + T++ V
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 184/405 (45%), Gaps = 51/405 (12%)
Query: 130 YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGY 189
Y+ C D+ + N ++ + C+ G++ A+++ DTV++NT+I+G ++G
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGL 176
Query: 190 MERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG 249
+ A EM++ GI L +S T
Sbjct: 177 ADEAYQFLSEMVKMGI------LPDTVSYNT----------------------------- 201
Query: 250 IVDFYCKCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKR-LFDSLSERNYVV 308
++D +CK GN A+++ I + + L++ Y + + +A R + S + + V
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPD----TMIIVNVLGACAIQATLSLGKQT 364
++++ + K + L RE ++ P+ T ++ ++ A + L+L Q
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEM-SVYPNHVTYTTLVDSLFKANIYRHALALYSQ- 319
Query: 365 HAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DVILYNVMIAGYAH 422
++ + +D + + L+D K G++ AEK+F+++ + ++ +V+ Y ++ G
Sbjct: 320 ---MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 423 HGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIY 482
G + A + +ML+ S+ P+ +T+ ++++ +G++E M ED NV+P +
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGF 435
Query: 483 HYACMVDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNACK 524
Y ++D + + E A+E MR I ++ + I A +N K
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 44/423 (10%)
Query: 173 DTVSWNTLIAGYVQNGYMERALTL-FIEMIEKGIEYNQHTLASVL-SACTGLKCLKLGKC 230
D+ WN+LI + NG + ++L + +MI G+ + L ++ S C K+G+
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC------KVGRL 145
Query: 231 VHAL-VLKNDGCSNQFVS-SGIVDFYCKCGNMRYA-----ESVYAGIGIKSPFATSSLIA 283
A+ +L+N S V+ + ++ C+ G A E V GI + + ++LI
Sbjct: 146 SFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGI-LPDTVSYNTLID 204
Query: 284 GYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 343
G+ GN +AK L D +SE N + T L S Y A+ + +R+ PD +
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSY---YNLHAIEEAYRDM-VMSGFDPDVV 260
Query: 344 I---IVNVL--GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNI---AY 395
I+N L G ++ L L + + + + LVD K NI A
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY-----TTLVDSLFK-ANIYRHAL 314
Query: 396 AEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSAC 455
A S +V D+++Y V++ G G +A + F+ +L+ + P+ +T+ AL+
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 456 RHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPIQIDASI 515
G + E F ++ + +V+P + Y+ M++ Y + LE+AV +RK+ Q +
Sbjct: 375 CKAGDLSSAE-FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ--NVV 431
Query: 516 WGAFLNACKINNNTTLVKQAEEELLKVEADNGSRYVQL-ANVYAAEGKWNEMGRIR--KE 572
F I+ L K +EE + +E R + + N Y + N + RI KE
Sbjct: 432 PNGFTYGTVIDG---LFKAGKEE-MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 573 MRG 575
++G
Sbjct: 488 VKG 490
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 158/379 (41%), Gaps = 59/379 (15%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAY---------------AG 49
+ S+N +I + K N +A+AL D S +L+++ +LS+Y +G
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG 254
Query: 50 AD---------------GCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYG 94
D G + L R + ++ + +T TT+++ K + +
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLR-EMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 95 KQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGC---DGVVDLVSKNAMVAA 151
++S MV + + L+D K G REA F + V ++V+ A+V
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 152 CCRDGKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYN 208
C+ G + A + + E + V+++++I GYV+ G +E A++L +M ++ + N
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 209 QHTLASVLSACTGLKCLKLGKCVHALVLKND----GC-SNQFVSSGIVDFYCKCGNMRYA 263
T +V+ K GK A+ L + G N ++ +V+ + G ++
Sbjct: 434 GFTYGTVIDG-----LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 264 ES-----VYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCS 314
+ V G+ + +SLI + G+ A + + ER + V + L S
Sbjct: 489 KGLVKDMVSKGVTLDQ-INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 315 GYVKSQQCEA--VFKLFRE 331
G +K + A +K RE
Sbjct: 548 GMLKFGKVGADWAYKGMRE 566
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 188/498 (37%), Gaps = 123/498 (24%)
Query: 136 CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMER 192
C ++V+ ++ C+ G+MD A ++F + D ++++TLI GY + G +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 193 ALTLFIEMIEKGIEYNQHTLASVLSA------------------CTGLK-------CLKL 227
LF + + KG++ + +S + C G+ L
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 228 GKCVHALVLKNDGCSNQFVSSG----------IVDFYCKCGNMRYAESVYAGIGIKSPFA 277
G C + + G Q + G ++D +CKCGN+R ++Y + IK +
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYP 458
Query: 278 T-----SSLIAGYSSKGNMTKAKR----LFDSLSERNYVVWTALCSGYVKSQQCEAVFKL 328
L+ G S +G M A R + N VV+ +L G+ + + + K+
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 329 FR-----------------------EFRTTEALI-----------PDTMIIVNVLGACAI 354
FR E R EAL PD + ++ A
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 355 QATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVIL 412
++G Q + R K++ D + + ++ + KC I A K F + + + D++
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 413 YNVMIAGY--------AHHGFE---------------------------NKAIQLFQEML 437
YN MI GY A FE + AI++F M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ KP+A+T+ L+ +E K F M+E + P I Y+ ++D + ++
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRV 757
Query: 498 EKAVEFMRKIPIQIDASI 515
++A + IDA +
Sbjct: 758 DEATNIFHQ---AIDAKL 772
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 201/515 (39%), Gaps = 97/515 (18%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
+ +++ +I Y KA L LF A H+ D+V ++S + Y + T ++ +
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV-V 378
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ RM I + +T T ++ + + M+ ++K + S SSLID +
Sbjct: 379 YKRMLC--QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 121 SKCGSFREAYNVFSG----------------CDGV----------------------VDL 142
KCG+ R + ++ DG+ +++
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 143 VSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQNGYMERALTLFIE 199
V N+++ CR + D AL VF + D ++ T++ + G +E AL LF
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 200 MIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCG 258
M + G+E + +++ A C +K +G + L+ +N ++ V + ++ KC
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 259 NMRYAESVYAGI--GIKSP--FATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWT 310
+ A + + G P +++I GY S + +A+R+F+ L N V T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
L K+ + ++F +I A Y
Sbjct: 676 ILIHVLCKNNDMDGAIRMF-----------------------SIMAEKGSKPNAVTY--- 709
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENK 428
L+D +SK +I + K F+ + + ++ Y+++I G G ++
Sbjct: 710 ----------GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 429 AIQLFQEMLKISLKPDAITFVALLSA-CRHRGLVE 462
A +F + + L PD + + L+ C+ LVE
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 207/489 (42%), Gaps = 112/489 (22%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSAS----HRDLVSYNSMLSAYAGADGCDTVAL-DLF 61
++++A+I AY ++ +A ++F+S +LV+YN+++ A G G + + F
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFF 327
Query: 62 ARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYS 121
MQ R+ + D IT ++L VC S
Sbjct: 328 DEMQ--RNGVQPDRITFNSLL-------AVC----------------------------S 350
Query: 122 KCGSFREAYNVFSGCDGV---VDLVSKNAMVAACCRDGKMDMALNVFWKNPE---FNDTV 175
+ G + A N+F D+ S N ++ A C+ G+MD+A + + P + V
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
S++T+I G+ + G + AL LF EM GI ++ + ++LS T K+G+ AL
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT-----KVGRSEEALD 465
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKA 294
+ + A +GIK T ++L+ GY +G +
Sbjct: 466 ILRE---------------------------MASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 295 KRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTT---------EALIPD 341
K++F + N + ++ L GY K + ++FREF++ ALI
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI-- 556
Query: 342 TMIIVNVLGACAIQATLSLGKQ-THAYILRTKLNMDEKLASALVDM---YSKCGNIAYAE 397
+ N L A+ + K+ ++ +D SA +D YS G++ ++
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSS 616
Query: 398 KSFQLVTDSDRDVILY---------NVMIAGYAHHGFENKA--IQLFQEMLKISLKPDAI 446
+ +T+++ + ++ N G + + +++F++M ++ +KP+ +
Sbjct: 617 SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676
Query: 447 TFVALLSAC 455
TF A+L+AC
Sbjct: 677 TFSAILNAC 685
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 162/394 (41%), Gaps = 84/394 (21%)
Query: 146 NAMVAACCRDGKMDMALNVF---WKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIE 202
+AM++ R GK+ +A +F + N +++ LI+ Y ++G E A+++F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 203 KGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRY 262
G+ N T +V+ A C K G + D V + F
Sbjct: 297 YGLRPNLVTYNAVIDA-----CGKGGMEFKQVAKFFDEMQRNGVQPDRITF--------- 342
Query: 263 AESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVK 318
+SL+A S G A+ LFD ++ E++ + L K
Sbjct: 343 ----------------NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 319 SQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEK 378
Q + F++ A +P I+ NV+ +Y
Sbjct: 387 GGQMDLAFEIL-------AQMPVKRIMPNVV----------------SY----------- 412
Query: 379 LASALVDMYSKCGNIAYAEKSFQ----LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQ 434
S ++D ++K G A F L DR + YN +++ Y G +A+ + +
Sbjct: 413 --STVIDGFAKAGRFDEALNLFGEMRYLGIALDR--VSYNTLLSIYTKVGRSEEALDILR 468
Query: 435 EMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRG 494
EM + +K D +T+ ALL +G + +K F MK ++ VLP + Y+ ++D Y +G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKG 527
Query: 495 NQLEKAVEFMRKIP---IQIDASIWGAFLNA-CK 524
++A+E R+ ++ D ++ A ++A CK
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 381 SALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAI-QLFQEML 437
SAL+ Y + G A F + + +++ YN +I G E K + + F EM
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 438 KISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQL 497
+ ++PD ITF +LL+ C GL E F M + + +++ Y ++D +G Q+
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQM 390
Query: 498 EKAVEFMRKIPIQ------------IDA-SIWGAFLNAC--------------KINNNTT 530
+ A E + ++P++ ID + G F A +++ NT
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 531 L-----VKQAEE--ELLKVEADNGSR-----YVQLANVYAAEGKWNEMGRIRKEMR 574
L V ++EE ++L+ A G + Y L Y +GK++E+ ++ EM+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 372 KLNMDEKLASALVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHGFENKA 429
+ N KLASA++ + G + A++ F+ V ++ +I+ Y G +A
Sbjct: 228 RKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEA 287
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGE--KFFMSMKEDYNVLPEIYHYACM 487
I +F M + L+P+ +T+ A++ AC +G +E + KFF M+ + V P+ + +
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDAC-GKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSL 345
Query: 488 VDMYGRGNQLEKAVEF---MRKIPIQIDASIWGAFLNA-CKINNNTTLVKQAEEELLKVE 543
+ + RG E A M I+ D + L+A CK + + +K
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 544 ADNGSRYVQLANVYAAEGKWNEMGRIRKEMR 574
N Y + + +A G+++E + EMR
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 25/366 (6%)
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
V++ LI Y + G + +AL + M E+G+++N T + +++ LK V
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 235 VLKNDGCSNQFVSSGIVDFYCKCGNM-RYAESVYAGIGIKSPFATSS---LIAGYSSKGN 290
++K + + + I+ +C GNM R ++V ++ T + +I GY+ G+
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 291 MTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
M ++ +FD + V + L +G V+ +Q E ++ E T + +
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM-TLAGVSANEHTYT 663
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKL-----NMDEKLASALVDMYSKCGNI--AYAEKS 399
++ Q S+G A+ T+L ++D AL+ K G + A A
Sbjct: 664 KIM-----QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 400 FQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
+ R+ +YN++I G+A G +A L Q+M K +KPD T+ + +SAC G
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 460 LVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV---EFMRKIPIQIDASIW 516
+ + M E V P I Y ++ + R + EKA+ E M+ + I+ D +++
Sbjct: 779 DMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 517 GAFLNA 522
L +
Sbjct: 838 HCLLTS 843
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 174/444 (39%), Gaps = 74/444 (16%)
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTVS---WNTLIAGYVQNGYMERALTL 196
+ LV+ + +V + G + A F + + T++ + +I + Q MERA L
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSG-IVDFYC 255
EM E+GI+ +++ T + K G V LK G + V+ G +++ Y
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR-LKECGFTPTVVTYGCLINLYT 495
Query: 256 KCGNMRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSG 315
K G + A V ++ + + + N ++ + +G
Sbjct: 496 KVGKISKALEV---------------------------SRVMKEEGVKHNLKTYSMMING 528
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGA-C-------AIQATLSLGKQTHAY 367
+VK + F +F + E + PD ++ N++ A C AIQ + K H
Sbjct: 529 FVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 368 ILRTKLNM--------DEKLASALVDMYSKCGNIAYA----------------EKSFQLV 403
RT + + D + + + DM +CG + EK+ +++
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 404 TDSDRDVI-----LYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHR 458
+ + Y ++ GYA G KA + F + L D T+ ALL AC
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 459 GLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGR-GNQLEKA--VEFMRKIPIQIDASI 515
G ++ M N+ + Y ++D + R G+ E A ++ M+K ++ D
Sbjct: 708 GRMQSALAVTKEMSA-RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 516 WGAFLNACKINNNTTLVKQAEEEL 539
+ +F++AC + Q EE+
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEM 790
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 189/479 (39%), Gaps = 63/479 (13%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAG-ADGCDTVALD 59
NA + II A+ + N+ +A AL + Y++M+ Y AD + L
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD--EKKGLV 470
Query: 60 LFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDM 119
+F R++ T + +T ++NL K+ + ++ M + + S +I+
Sbjct: 471 VFKRLKECGFTPTV--VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 120 YSKCGSFREAYNVFSGC--DGV-VDLVSKNAMVAACCRDGKMDMALNVFWKNPEFND--- 173
+ K + A+ VF +G+ D++ N +++A C G MD A+ + +
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
T ++ +I GY ++G M R+L +F M G HT +++ ++ ++ K V
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL--VEKRQMEKAVEI 646
Query: 234 L-VLKNDGCS-NQFVSSGIVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSLIAGYS 286
L + G S N+ + I+ Y G+ A + G+ + F +L+
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV-DIFTYEALLKACC 705
Query: 287 SKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
G M A + +S RN V+ L G+ + L ++ + E + PD
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDI 764
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
+ + AC+ ++ QT ++E A +
Sbjct: 765 HTYTSFISACSKAGDMNRATQT----------IEEMEALGV------------------- 795
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
++ Y +I G+A KA+ ++EM + +KPD + LL++ R +
Sbjct: 796 ----KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 192/434 (44%), Gaps = 44/434 (10%)
Query: 117 IDMYSKCGSFREAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---- 172
+ +Y + SF + +VF+ C VV+ A CR G +D A+ VF K E +
Sbjct: 210 LHVYDQMISFEVSPDVFT-CSIVVN---------AYCRSGNVDKAM-VFAKETESSLGLE 258
Query: 173 -DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 231
+ V++N+LI GY G +E + M E+G+ N T S++ ++ + V
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 232 HALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAG---IGIKSPFAT-SSLIAGYSS 287
L+ + ++Q + ++D YC+ G +R A V+ IG+++ +SLI GY
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 288 KGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTM 343
G + +A+++F +++ ++ + L GY ++ + KL + E ++P T+
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE-VVP-TV 436
Query: 344 IIVNVL--GACAIQA---TLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEK 398
+ N+L G I A LSL K +L+ +N DE S L++ K G+ A K
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKM----MLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 399 SFQ--LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACR 456
++ L D I NVMI+G N+A ++ + KP T+ AL
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 457 HRGLVELGEKFFM-SMKEDYNVLPEIYHYACMVD---MYGRGNQLEKAVEFMRKIPIQID 512
G L E F + E + P I Y ++ Y N++ V +R +
Sbjct: 553 KVG--NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 513 ASIWGAFLNA-CKI 525
+ +GA + C I
Sbjct: 611 VATYGALITGWCNI 624
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 131/618 (21%), Positives = 234/618 (37%), Gaps = 124/618 (20%)
Query: 4 RNAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
RN ++ ++I Y K + +A +F+ + LV+ M V +D + R
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG----------VLMDGYCR 343
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
RD + ++H M++ + +SLI+ Y K
Sbjct: 344 TGQIRDAV------------------------RVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 124 GSFREAYNVFSGCDG---VVDLVSKNAMVAACCRDGKMDMALNV---FWKNPEFNDTVSW 177
G EA +FS + D + N +V CR G +D AL + + +++
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 178 NTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL----KCLKLGKCVHA 233
N L+ GY + G L+L+ M+++G+ ++ + +++L A L + +KL + V A
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 234 LVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGI---KSPFAT-SSLIAGYSSKG 289
L D + + SG+ CK + A+ + + I K T +L GY G
Sbjct: 500 RGLLTDTITLNVMISGL----CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 290 NMTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
N+ +A + + + + ++ L SG K + V L E R L P
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR-ARGLTP----T 610
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGN-------IAYAEK 398
V GA I ++G AY T M EK + V++ SK N I A
Sbjct: 611 VATYGAL-ITGWCNIGMIDKAYA--TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACL 667
Query: 399 SFQLVTDSD----------------------------------------RDVILYNVMIA 418
Q + D D + I+YNV IA
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 419 GYAHHGFENKAIQLFQEMLKIS-LKPDAITFVALLSACRHRGLVELGEKFF----MSMKE 473
G G A +LF ++L PD T+ L+ C G ++ + F M++K
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG--DINKAFTLRDEMALK- 784
Query: 474 DYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDASIWGAFLNACKINNNTT 530
++P I Y ++ + +++A + K+P I +A + ++ + N
Sbjct: 785 --GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 531 LVKQAEEELLKVEADNGS 548
+ +E++++ GS
Sbjct: 843 EAMRLKEKMIEKGLVRGS 860
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 184 YVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSN 243
V+ G AL ++ +MI + +
Sbjct: 200 LVRKGENFVALHVYDQMISFEVS-----------------------------------PD 224
Query: 244 QFVSSGIVDFYCKCGN----MRYAESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLF 298
F S +V+ YC+ GN M +A+ + +G++ T +SLI GY+ G++ R+
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVL 284
Query: 299 DSLSE----RNYVVWTALCSGYVKS---QQCEAVFKLFREFRTTEALIPDTMIIVNVLGA 351
+SE RN V +T+L GY K ++ E VF+L +E + L+ D + ++
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE----KKLVADQHMYGVLMDG 340
Query: 352 CAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD--SDRD 409
+ + H ++ + + + ++L++ Y K G + AE+ F + D D
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 410 VILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
YN ++ GY G+ ++A++L +M + + P +T+ LL
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 214/516 (41%), Gaps = 49/516 (9%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
+ FS++ +I KA L A LFD S R D+ YN ++ + T A++L
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT-AMEL 241
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ R+ ++ + T M++ +K V ++ M + + + SSLI
Sbjct: 242 WDRLLED-SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 121 SKCGSFREAYNVFSGCD---GVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFNDTV-- 175
G+ +A +VF+ D +D+V+ N M+ CR GK+ +L + W+ E ++V
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNI 359
Query: 176 -SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
S+N LI G ++NG ++ A ++ M KG ++ T + G CV+
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH----------GLCVNGY 409
Query: 235 VLKNDGCSNQFVSSG----------IVDFYCKCGNMRYAESVYA-----GIGIKSPFATS 279
V K G + SSG I+D CK + A ++ G+ + S +
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS-HVCN 468
Query: 280 SLIAGYSSKGNMTKAKRLFDSLSE---RNYVV-WTALCSGYVKSQQCEAVFKLFREFRTT 335
+LI G + +A + + R VV + L G K+ + +E
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-LE 527
Query: 336 EALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
PD +L + L + L++ L D + + L+ G +
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 396 AEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
A + + +++ YN ++ G+ G N+A ++ M K+ L+PD I++ ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 454 A-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMV 488
C RG V +FF + ++ + P +Y + +V
Sbjct: 648 GLCMCRG-VSYAMEFFDDAR-NHGIFPTVYTWNILV 681
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 204/491 (41%), Gaps = 50/491 (10%)
Query: 29 FDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKL 88
F + S R+L + + S G D A+DLF M +R + I + + AK
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADD--AVDLFRDMIQSRPLPTV--IDFNRLFSAIAKT 101
Query: 89 R----VVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV---VD 141
+ V+ KQM S + S + LS +I+ + +C A++ + D
Sbjct: 102 KQYELVLALCKQMESKGIAH----SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 142 LVSKNAMVAACCRDGKMDMALNVFWKNPEFNDT---VSWNTLIAGYVQNGYMERALTLFI 198
V N ++ C + ++ AL + + E ++ NTL+ G NG + A+ L
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 199 EMIEKGIEYNQHTLASVL-----SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDF 253
M+E G + N+ T VL S T L ++L + + +K D S I+D
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIKLDAVK----YSIIIDG 272
Query: 254 YCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----N 305
CK G++ A +++ + G K+ T ++LI G+ + G +L + +R N
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V ++ L +VK + +L +E + P+T+ +++ + L Q
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNI-----AYAEKSFQLVTDSDRDVILYNVMIAGY 420
++ + D + L++ Y K I + E S + V + + YN ++ G+
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI---ANTVTYNTLVQGF 448
Query: 421 AHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFF-----MSMKEDY 475
G A +LFQEM+ ++PD +++ LL G +E + F M+ D
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 476 NVLPEIYHYAC 486
+ I H C
Sbjct: 509 GIYMIIIHGMC 519
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 20/331 (6%)
Query: 140 VDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN-DTVSWNTLIAGYVQNGYMERALTL 196
+D V + ++ C+DG +D A N+F + F D +++NTLI G+ G + L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 197 FIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCK 256
+MI++ I N T + ++ + L+ + +++ N + ++D +CK
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 257 CGNMRYA---ESVYAGIGIKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSER----NYVV 308
+ A + G T + LI GY + LF +S R N V
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 309 WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYI 368
+ L G+ +S + E KLF+E + + PD + +L L + I
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEM-VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 369 LRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL-----VTDSDRDVILYNVMIAGYAHH 423
++K+ +D + ++ ++ C N + + ++ L + D YN+MI+
Sbjct: 500 EKSKMELD--IGIYMIIIHGMC-NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSA 454
+KA LF++M + PD +T+ L+ A
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 166/386 (43%), Gaps = 31/386 (8%)
Query: 74 DEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVF 133
+E+T +LN+ K ++ M + L S +ID K GS A+N+F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 134 SGCD--GV-VDLVSKNAMVAACCRDGKMDMA---LNVFWKNPEFNDTVSWNTLIAGYVQN 187
+ + G D+++ N ++ C G+ D L K + V+++ LI +V+
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 188 GYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCSNQFV 246
G + A L EM+++GI N T S++ C + + + V ++ K GC +
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK--GCDPDIM 404
Query: 247 SSGI-VDFYCKCGNMRYAESVYAGIGIKSPFATS----SLIAGYSSKGNMTKAKRLFDSL 301
+ I ++ YCK + ++ + ++ A + +L+ G+ G + AK+LF +
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 302 SER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQAT 357
R + V + L G + + E ++F + ++ + + ++ + G C
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC----- 519
Query: 358 LSLGKQTHAYILRTKL-----NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSDR--DV 410
+ K A+ L L +D + + ++ + +++ A+ F+ +T+ D
Sbjct: 520 -NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 411 ILYNVMIAGYAHHGFENKAIQLFQEM 436
+ YN++I + A +L +EM
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEM 604
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 168/437 (38%), Gaps = 60/437 (13%)
Query: 155 DGKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLAS 214
D +D+ ++ P + +N L + + E L L +M KGI ++ +TL S
Sbjct: 70 DDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL-S 127
Query: 215 VLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---G 271
++ C +C+C + YA S I G
Sbjct: 128 IMINC----------------------------------FCRCRKLSYAFSTMGKIMKLG 153
Query: 272 IKSPFAT-SSLIAGYSSKGNMTKAKRLFDSLSERNY----VVWTALCSGY-VKSQQCEAV 325
+ ++L+ G + +++A L D + E + + L +G + + +AV
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 326 FKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVD 385
+ R T P+ + VL +L + + + +D S ++D
Sbjct: 214 VLIDRMVET--GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 386 MYSKCGNIAYAEKSFQLVTDSD-----RDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
K G++ + +F L + + D+I YN +I G+ + G + +L ++M+K
Sbjct: 272 GLCKDGSL---DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 441 LKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKA 500
+ P+ +TF L+ + G + ++ M + + P Y ++D + + N+LE+A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 501 ---VEFMRKIPIQIDASIWGAFLNA-CKINNNTTLVKQAEEELLKVEADNGSRYVQLANV 556
V+ M D + +N CK N ++ E L+ N Y L
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 557 YAAEGKWNEMGRIRKEM 573
+ GK ++ +EM
Sbjct: 448 FCQSGKLEVAKKLFQEM 464
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 37/292 (12%)
Query: 156 GKMDMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMI---EKG-IEYNQHT 211
G++D+ +F + P D SW + G ++ G E A LF+ M+ +KG +
Sbjct: 137 GRLDITRQMFDRMPH-RDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI 195
Query: 212 LASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIG 271
L VL AC ++ +LGK VHAL K G +D
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHK----------LGFID------------------- 226
Query: 272 IKSPFATSSLIAGYSSKGNMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFRE 331
+ + + SLI Y + A + LS N V W A + + + + V + F E
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 332 FRTTEALIPDTMIIVNVLGACA-IQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKC 390
+ + + NVL AC+ + G+Q HA ++ D + L++MY K
Sbjct: 287 M-GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 391 GNIAYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLK 442
G + AEK F+ D + V +N M+A Y +G +AI+L +M +K
Sbjct: 346 GKVKDAEKVFKSSKD-ETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 223/542 (41%), Gaps = 63/542 (11%)
Query: 5 NAFSWNAIIMA---YIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYAGADGCDTVA 57
N + N +++ Y + +++ AR +FD ++ ++N +++ Y +G A
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYC-LEGKLEDA 223
Query: 58 LDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLI 117
L + RM S + D +T T+L +K + K++ M K ++ ++L+
Sbjct: 224 LGMLERMVSEFK-VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
Query: 118 DMYSKCGSFREAYNV---FSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFN 172
Y K GS +EA+ + + + DL + N ++ C G M L + K+ +
Sbjct: 283 YGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 173 -DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS-ACTGLKCLKLGKC 230
D V++NTLI G + G A L +M G++ NQ T L C K + +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 231 VHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIK----SPFATSSLIAGYS 286
V LV + + ++ Y K G++ A + +G K + ++++
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 287 SKGNMTKAKRLFDSLSERNYVV----WTALCSGYVKSQQCEAVFKLFREFRTTEALIPDT 342
+ + +A L +S +R ++V + L G+ + ++ E +++ E + + + P
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK-ITPTV 521
Query: 343 MIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL 402
+++G L + DE S L L
Sbjct: 522 STFNSLIGGLCHHGKTELAME----------KFDELAESGL------------------L 553
Query: 403 VTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
DS +N +I GY G KA + + E +K S KPD T LL+ G+ E
Sbjct: 554 PDDST-----FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIP---IQIDASIWGAF 519
FF ++ E+ V + Y M+ + + +L++A + + ++ ++ D + +F
Sbjct: 609 KALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 520 LN 521
++
Sbjct: 667 IS 668
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 213/523 (40%), Gaps = 65/523 (12%)
Query: 40 YNSMLSAYAGADGCDTVALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHS 99
YN++L++ A D + M+ D + + T M+N KL V Q S
Sbjct: 186 YNTLLNSLARFGLVDEMKQ---VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 100 YMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCR 154
+V+ D F +SLI Y + A+ VF+ GC + V+ ++ C
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR--NEVAYTHLIHGLCV 300
Query: 155 DGKMDMALNVFWKNPE---FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHT 211
++D A+++F K + F ++ LI + AL L EM E GI+ N HT
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 212 LASVL-SACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI 270
++ S C+ K K + + + L+ N + +++ YCK G + A V +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 271 GIK--SPFATS--SLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQC 322
+ SP + LI GY K N+ KA + + + ER + V + +L G +S
Sbjct: 420 ESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 323 EAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASA 382
++ ++L L+PD +++ + + + + +N + + +A
Sbjct: 479 DSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 383 LVDMYSKCGNIAYAEKSFQ--LVTDSDRDVILYNVMIAGYAHHG-------FENKAIQL- 432
L+D Y K G + A + L + + + +N +I G G E K +++
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 433 ---------------------------FQEMLKISLKPDAITFVALLSA-CRHRGLVELG 464
FQ+ML KPDA T+ + CR L++
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD-A 656
Query: 465 EKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
E M+E+ V P+++ Y+ ++ YG Q A + ++++
Sbjct: 657 EDMMAKMREN-GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 199/479 (41%), Gaps = 81/479 (16%)
Query: 7 FSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY---NSMLSAYAGADGCDTVALDLFAR 63
F + II ++K +A LFD + L + N++LS + G A +L ++
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS-WLCKQGKTDEATELLSK 468
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+S IG + ++ ++ + + + + + S +++ + + S LID
Sbjct: 469 MESR--GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID----- 521
Query: 124 GSFR--------EAYNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN--- 172
G FR E N + + V+ V ++ C+ G+ A + E
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 173 -DTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCV 231
+S+N++I G+ + G M+ A+ + EM GI N T S+++ C K +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL----C-KNNRMD 636
Query: 232 HALVL----KNDGCSNQFVSSG-IVDFYCKCGNMRYAESVYA-----GIGIKSPFATSSL 281
AL + KN G + G ++D +CK NM A ++++ G+ P +SL
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI-YNSL 695
Query: 282 IAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEA 337
I+G+ + GNM A L+ + + + +T L G +K +L+ E +
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV-G 754
Query: 338 LIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAE 397
L+PD +I + +V+ SK G
Sbjct: 755 LVPDEIIY-----------------------------------TVIVNGLSKKGQFVKVV 779
Query: 398 KSFQLVTDSD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSA 454
K F+ + ++ +V++YN +IAG+ G ++A +L EML + PD TF L+S
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/541 (19%), Positives = 222/541 (41%), Gaps = 73/541 (13%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ ++I+A +K N+ A L D ++V+ S+++ + + AL LF +
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL-VSALVLFDK 364
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+ ++ + +T + ++ K + + + M S F + ++I + K
Sbjct: 365 ME--KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 124 GSFREAYNVF--SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWN 178
EA +F S G+ ++ N +++ C+ GK D A + K + VS+N
Sbjct: 423 QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYN 482
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKN 238
++ G+ + M+ A +F ++EKG++ N +T + ++ C + +AL + N
Sbjct: 483 NVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC-----FRNHDEQNALEVVN 537
Query: 239 DGCS-----NQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS-----SLIAGYSSK 288
S N V I++ CK G A + A + + S S+I G+ +
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 289 GNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMI 344
G M A ++ + N + +T+L +G K+ + + ++ E +
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK--------- 648
Query: 345 IVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVT 404
+ +D AL+D + K N+ A F +
Sbjct: 649 ---------------------------GVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 405 DS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE 462
+ + +YN +I+G+ + G A+ L+++MLK L+ D T+ L+ G +
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 463 LGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV---EFMRKIPIQIDASIWGAF 519
L + + M+ ++P+ Y +V+ + Q K V E M+K + + I+ A
Sbjct: 742 LASELYTEMQA-VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 520 L 520
+
Sbjct: 801 I 801
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 43/270 (15%)
Query: 281 LIAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 336
LI Y GN A+R+ LS+ N + +TAL Y + +C +FR +++
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS- 203
Query: 337 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL---RTKLNMDEKLASALVDMYSKCGNI 393
P + +L ++ +L ++ L D+K+ ++ MY K GN
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 394 AYAEKSFQLV----------------------------------TDSDRDVILYNVMIAG 419
A K F + +D DV+ Y ++I
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 323
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
Y E +A+ +F+EML ++P + LL A G+VE + F SM+ D + P
Sbjct: 324 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFP 382
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPI 509
+++ Y M+ Y + +E A +F ++I +
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 170/406 (41%), Gaps = 69/406 (16%)
Query: 111 FALSSLIDMYSKCGSFREAYNVF-SGCDG---VVDLVSKNAMVAACCRDGKMDMALNVF- 165
F S++I + K G A F S D V +LV+ +V+A C+ GK+D ++
Sbjct: 172 FVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVR 231
Query: 166 ----------------WKNPEF---------------------NDTVSWNTLIAGYVQNG 188
W + F D VS++ LI G + G
Sbjct: 232 RLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 189 YMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCS-----N 243
+E AL L +MI++G+E N T +++ K+GK A VL N S +
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLC-----KMGKLEEAFVLFNRILSVGIEVD 346
Query: 244 QFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFAT-SSLIAGYSSKGNMTKAKRLFD 299
+F+ ++D C+ GN+ A S+ + GI+ T +++I G G +++A +
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Query: 300 SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLS 359
+ + + ++ L Y+K Q +AV ++ R F EA IP +++ N+L ++A L
Sbjct: 407 GVV-GDVITYSTLLDSYIKVQNIDAVLEIRRRF--LEAKIPMDLVMCNIL----LKAFLL 459
Query: 360 LGKQTHAYIL-----RTKLNMDEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVILY 413
+G A L L D + ++ Y K G I A + F +L S + Y
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCY 519
Query: 414 NVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRG 459
N +I G + A ++ E+ + L D T LL + G
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/526 (18%), Positives = 212/526 (40%), Gaps = 34/526 (6%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHR----DLVSYNSMLSAYAGADGCDTVALDL 60
+ F + +I + NL +A ++ R +++YN++++ A
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD--- 402
Query: 61 FARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMY 120
+ ++ +G D IT +T+L+ K++ + ++ ++ + + L+ +
Sbjct: 403 ----EVSKGVVG-DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAF 457
Query: 121 SKCGSFREA---YNVFSGCDGVVDLVSKNAMVAACCRDGKMDMALNVF--WKNPEFNDTV 175
G++ EA Y D D + M+ C+ G+++ AL +F + + V
Sbjct: 458 LLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV 517
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLS---ACTGLKCLKLGKCVH 232
+N +I + G ++ A + IE+ EKG+ + HT ++L A G K + LG
Sbjct: 518 CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI-LGLVYG 576
Query: 233 ALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGI---GIKSPFATSSLIAGYSSKG 289
L +D C + + CK G+ A VY + G+ F ++ L +
Sbjct: 577 LEQLNSDVCLGMLNDA--ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 290 NMTKAKRLFD----SLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMII 345
++ + + +LS + + +T + +G K L F + + +T+
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC-SFAKSRGVTLNTITY 693
Query: 346 VNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTD 405
+++ Q L + + L E L+D K G AEK +
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 406 SD--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVEL 463
++I+YN ++ GY G A+++ + + PDA T +++ +G +E
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEE 813
Query: 464 GEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKIPI 509
F K D N+ + + + ++ + ++E+A +R++ +
Sbjct: 814 ALSVFTEFK-DKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 27/248 (10%)
Query: 274 SPFATSSLIAGYSSKGNMTKAKRLFDSLSERNY------VVWTALCSGYVKSQQCEAVFK 327
S SLI + KG M A + + ++ +N V +A+ SG+ K + E
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 328 LFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLN-----MDEKLASA 382
F + L+P+ + + + A LGK L +L D S
Sbjct: 193 FFESAVDSGVLVPNLVTYTTL-----VSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 383 LVDMYSKCGNI--AYAEKSFQLVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKIS 440
+ Y K G + A + + +RDV+ Y+++I G + G +A+ L +M+K
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 441 LKPDAITFVALLSACRHRGLVELG--EKFFMSMKEDYNVLPEI--YHYACMVDMYGRGNQ 496
++P+ IT+ A++ RGL ++G E+ F+ +V E+ + Y ++D R
Sbjct: 308 VEPNLITYTAII-----RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 497 LEKAVEFM 504
L +A +
Sbjct: 363 LNRAFSML 370
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 158/371 (42%), Gaps = 53/371 (14%)
Query: 146 NAMVAACCRDGKMDMALNVFWKNPEFN---DTVSWNTLIAGYVQ---NGYMERALTLFIE 199
N ++ A C+ GKM+ A +V + + VS+NTLI GY + NG M +A + E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M+E + N T ++ K+D G+
Sbjct: 287 MVENDVSPNLTTFNILIDG----------------FWKDDNLP---------------GS 315
Query: 260 MRYAESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSG 315
M+ + + + + +SLI G + G +++A + D + + N + + AL +G
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNM 375
+ K+ + +F + A +P T + N+L I A LGK + L+ ++
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGA-VPTTRM-YNML----IDAYCKLGKIDDGFALKEEMER 429
Query: 376 -----DEKLASALVDMYSKCGNIAYAEKSF-QLVTDSDRDVILYNVMIAGYAHHGFENKA 429
D + L+ + GNI A+K F QL + D++ +++++ GY G KA
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKA 489
Query: 430 IQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVD 489
L +EM K+ LKP +T+ ++ G ++ M+++ + + Y ++
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 490 MYGRGNQLEKA 500
Y + +LE A
Sbjct: 550 GYSQKGKLEDA 560
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 169/394 (42%), Gaps = 48/394 (12%)
Query: 101 MVKTANDLSKFALSSLIDMYSKCGSFREAYNVFS-----GCDGVVDLVSKNAMVAACCR- 154
M++ + F + +I+ K G +A +V GC ++VS N ++ C+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP--NVVSYNTLIDGYCKL 271
Query: 155 --DGKM---DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQ 209
+GKM D L +N + ++N LI G+ ++ + ++ +F EM+++ ++ N
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 210 HTLASVLSA-CTGLKCLKLGKCVHALVLKNDGCS-----NQFVSSGIVDFYCKCGNMRYA 263
+ S+++ C G GK A+ +++ S N + +++ +CK ++ A
Sbjct: 332 ISYNSLINGLCNG------GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 264 ESVYAGIGIKSPFATSS----LIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSG 315
++ + + T+ LI Y G + L + + V + L +G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 316 YVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL---RTK 372
++ EA KLF + T +PD ++ ++L ++ G+ A +L +K
Sbjct: 446 LCRNGNIEAAKKLFDQL--TSKGLPD-LVTFHIL----MEGYCRKGESRKAAMLLKEMSK 498
Query: 373 LNMDEKLASALVDM--YSKCGNIAYAEKSFQLVTDSDR---DVILYNVMIAGYAHHGFEN 427
+ + + + + M Y K GN+ A + R +V YNV++ GY+ G
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 428 KAIQLFQEMLKISLKPDAITFVALLSACRHRGLV 461
A L EML+ L P+ IT+ + +G V
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 43/270 (15%)
Query: 281 LIAGYSSKGNMTKAKRLFDSLSE----RNYVVWTALCSGYVKSQQCEAVFKLFREFRTTE 336
LI Y GN A+R+ LS+ N + +TAL Y + +C +FR +++
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS- 210
Query: 337 ALIPDTMIIVNVLGACAIQATLSLGKQTHAYIL---RTKLNMDEKLASALVDMYSKCGNI 393
P + +L ++ +L ++ L D+K+ ++ MY K GN
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 394 AYAEKSFQLV----------------------------------TDSDRDVILYNVMIAG 419
A K F + +D DV+ Y ++I
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 330
Query: 420 YAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLP 479
Y E +A+ +F+EML ++P + LL A G+VE + F SM+ D + P
Sbjct: 331 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFP 389
Query: 480 EIYHYACMVDMYGRGNQLEKAVEFMRKIPI 509
+++ Y M+ Y + +E A +F ++I +
Sbjct: 390 DLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 178/418 (42%), Gaps = 31/418 (7%)
Query: 109 SKFALSSLIDMYSKCGSFREAYNVFS--GCDGVV-DLVSKNAMVAACCRDGKM---DMAL 162
S ++ ++++ + G A NVF GVV D S MV C RDGK+ D L
Sbjct: 181 SSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWL 240
Query: 163 NVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 222
+ D + ++ +NG + RA+ F +MI+ G + N S++
Sbjct: 241 TGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKK 300
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFAT---- 278
+K + +++N N + + ++D CK G A ++ + +
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 279 -SSLIAGYSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFR 333
+S+I GY + + +A+ LF + E+ N +T L +G+ K+ ++L
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN--- 417
Query: 334 TTEALIPDTMIIVNVLG-ACAIQATLSLGKQTHAYILRTK-----LNMDEKLASALVDMY 387
L+ D + N+ AI + + AY L K L D + L+
Sbjct: 418 ----LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 388 SKCGNIAYAEKSFQLV--TDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDA 445
K +I A F + T + D+ L N++IA + ++ +LFQ ++ + L P
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 446 ITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEF 503
T+ +++S G ++L K+F +MK + +P+ + Y ++ + + +++A +
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKR-HGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 22/287 (7%)
Query: 236 LKNDGCSNQFVS-SGIVDFYCKCGNMRYAESVYAGIGIKSPFATSS----LIAGYSSKGN 290
++N G + ++ + +++ + G + YAE+V+ + ++ SS ++ G G
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 291 MTKAKRLFDSLSERNYVVWTALCSGYVKSQQCE--AVFKLFREFRTTEAL--IPDTMIIV 346
+ +A R + +R ++ A C+ + + CE V + FR L P+ +
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCT-LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQL---V 403
+++ + ++ + ++R + +AL+D K G + EK+F+L +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG---WTEKAFRLFLKL 348
Query: 404 TDSD---RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGL 460
SD +V Y MI GY N+A LF M + L P+ T+ L++ H
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING--HCKA 406
Query: 461 VELGEKF-FMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRK 506
G + M++ D +P IY Y +D + ++ +A E + K
Sbjct: 407 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 170/410 (41%), Gaps = 61/410 (14%)
Query: 112 ALSSLIDMYSKCGSFREAYNVF---SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWK- 167
A +SLI+ Y + + R+ Y + + V+ + +V C G +D A N+ +
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 168 -----NPEFNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGL 222
P + V + TLI ++QN A+ + EM E+GI + S++ +
Sbjct: 444 IASGCRP---NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 223 KCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGNM----RYAESVYAGIGIKSPFAT 278
K + + +++N N F + Y + +Y + + + +
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLSERNYV----VWTALCSGYVKSQQCEAVFKLFREFRT 334
+ LI Y KG + +A + S+ ++ + +T L +G K+ + + ++FRE R
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
+ + PD S G L++ +SK GN+
Sbjct: 621 -KGIAPDV---------------FSYG--------------------VLINGFSKLGNMQ 644
Query: 395 YAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
A F + + +VI+YN+++ G+ G KA +L EM L P+A+T+ ++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 453 SA-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAV 501
C+ L E + F MK ++P+ + Y +VD R N +E+A+
Sbjct: 705 DGYCKSGDLAE-AFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAI 752
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 157/430 (36%), Gaps = 116/430 (26%)
Query: 137 DGVVDLVSKNAMVAACCRDGKM--DMALNVFWKNPEFNDTVS----------------WN 178
DG ++V + M+A+ CR + + F +N F D + +N
Sbjct: 434 DGAYNIVKE--MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 179 TLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-------------------- 218
+LI G + M+ A + +EM+E G++ N T + +S
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 219 --------CTGL--KCLKLGKCVHAL------------------------VLKND----- 239
CTGL + K GK + A + KND
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 240 ----------GCSNQFVSSGI-VDFYCKCGNMRYAESVYAGI---GI-KSPFATSSLIAG 284
G + S G+ ++ + K GNM+ A S++ + G+ + + L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 285 YSSKGNMTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIP 340
+ G + KAK L D +S + N V + + GY KS F+LF E + + L+P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVP 730
Query: 341 DTMIIVNVLGAC-----AIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAY 395
D+ + ++ C +A G T +AL++ K G
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP------FNALINWVFKFGKTEL 784
Query: 396 AEKSFQLVTDSDRDV------ILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFV 449
+ + D D + YN+MI G A +LF +M +L P IT+
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 450 ALLSACRHRG 459
+LL+ G
Sbjct: 845 SLLNGYDKMG 854
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 196/472 (41%), Gaps = 57/472 (12%)
Query: 5 NAFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSMLSAYAGADGCDTVALDLFARM 64
NAF++ A I YI+A A ++ + + ++ +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 65 QSARDT-IGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
+S D I D T T ++N K V +++ M F+ LI+ +SK
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 124 GSFREAYNVFSGC--DGVV-DLVSKNAMVAACCRDGKMDMA------LNVFWKNPEFNDT 174
G+ ++A ++F +G+ +++ N ++ CR G+++ A ++V +P +
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP---NA 697
Query: 175 VSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHAL 234
V++ T+I GY ++G + A LF EM KG+ + +++ C L ++ + +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE--RAITIF 755
Query: 235 VLKNDGCSNQFVS-SGIVDFYCKCGNM--------RYAESVYAGIGIKSPFATSSLIAGY 285
GC++ + ++++ K G R + + G + + +I
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 286 SSKGNMTKAKRLFDSLSERNY----VVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPD 341
+GN+ AK LF + N + +T+L +GY K + +F +F E + PD
Sbjct: 816 CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPD 874
Query: 342 TMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ 401
+++ + I A L G T A +L +D+ A VD C +
Sbjct: 875 -----HIMYSVIINAFLKEGMTTKALVL-----VDQMFAKNAVD--DGC----------K 912
Query: 402 LVTDSDRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLS 453
L + R +++G+A G A ++ + M+++ PD+ T + L++
Sbjct: 913 LSISTCR------ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 111/627 (17%), Positives = 238/627 (37%), Gaps = 108/627 (17%)
Query: 91 VCYGKQMHSYMVKTANDLSKFALSS-----LIDMYSKCGSFREA----------YNVFSG 135
V +G Y+ K + + F SS L+ S+C +A ++V+ G
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 136 C---DGVVDLVSKNAMVAACCRDGKMDMALNVFWKNP-EFNDTV---------------- 175
+ V D+ + + ++ A CR G + + +V +K EF
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 176 -------SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLG 228
+++ LI G + +E A +L +EM G+ + HT + ++ +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 229 K-CVHAL-----------------VLKNDGCSNQ-------FVSSG----------IVDF 253
K VH + V+ +G + ++SG +++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 254 YCKCGNMRYAESVYAGIG----IKSPFATSSLIAGYSSKGNMTKA----KRLFDSLSERN 305
YC+ N+R + + + SP+ +++ G S G++ A K + S N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 306 YVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTH 365
V++T L ++++ + ++ +E + + + PD +++ + + +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 366 AYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHH 423
++ L + A + Y + A A+K + + + + +L +I Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 424 GFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELGEKFFMSMKEDYNVLPEIYH 483
G +A ++ M+ + DA T+ L++ V+ E+ F M+ + P+++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFS 629
Query: 484 YACMVDMYGRGNQLEKA-------VEFMRKIPIQIDASIWGAFLNACKINNNTTLVKQAE 536
Y +++ + + ++KA VE + I + G F + +I L+ +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL---D 686
Query: 537 EELLKVEADNGSRYVQLANVYAAEGKWNEMGRIRKEMRGKE--------ATKLPGCSWIY 588
E +K N Y + + Y G E R+ EM+ K T + GC +
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 589 -VENGIHVFTSGDTSHSKADAIYSTLV 614
VE I +F + + + A ++ L+
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALI 773
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 211/522 (40%), Gaps = 64/522 (12%)
Query: 8 SWNAIIMAYIKAHNLTQARALFD----SASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++NA++ Y K+H +A + + + +V+YNS++SAYA DG A++L +
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA-RDGMLDEAMEL--K 372
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
Q A D T TT+L+ + V + M + ++ I MY
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 124 GSFREAYNVFSG---CDGVVDLVSKNAMVAACCRDGKMDMALNVFWKN-------PEFND 173
G F E +F C D+V+ N ++A ++G MD ++ +K PE
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMKRAGFVPERE- 490
Query: 174 TVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHA 233
++NTLI+ Y + G E+A+T++ M++ G+ + T +VL+A + + V A
Sbjct: 491 --TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 234 LVLKNDGCSNQFVSSGIVDFYC---KCGNMR-YAESVYAGIGIKSPFATSSLIAGYSSKG 289
+ N+ ++ Y + G M AE VY+G+ +L+ S
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 290 NMTKAKRLFDSLSERNYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVL 349
+ +A+R F L ER + PD + +++
Sbjct: 609 LLPEAERAFSELKERGFS--------------------------------PDITTLNSMV 636
Query: 350 GACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQ--LVTDSD 407
+ ++ Y+ ++L+ M+S+ + +E+ + L
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 408 RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVE--LGE 465
D+I YN +I Y + A ++F EM + PD IT+ + + + E +G
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 466 KFFMSMKEDYNVLPEIYHYACMVDMYGRGNQLEKAVEFMRKI 507
+M + P Y +VD Y + N+ ++A F+ +
Sbjct: 757 VRYMI---KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/579 (18%), Positives = 230/579 (39%), Gaps = 99/579 (17%)
Query: 36 DLVSYNSMLSAYAGA---------------DGCDT------VALDLFARMQSA------- 67
D+ SY S++SA+A + DGC V L++F +M +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 68 -----RDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSK 122
D I D T T++ + + Q+ M K ++L+D+Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 123 CGSFREAYNVFSG--CDGV-VDLVSKNAMVAACCRDGKMDMAL---NVFWKNPEFNDTVS 176
+EA V + +G +V+ N++++A RDG +D A+ N + D +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 177 WNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTG----LKCLKLGKCVH 232
+ TL++G+ + G +E A+++F EM G + N T + + + +K+ ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 233 ALVLKND---------------------GCSNQFVSSG----------IVDFYCKCGNMR 261
L D G + +G ++ Y +CG+
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 262 YAESVYAGI---GIKSPFATSSLIAGYSSKGNMTKAK-----RLFDSLSERNYVVWTALC 313
A +VY + G+ +T + + ++G M + + D + N + + +L
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 314 SGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKL 373
Y ++ + L E + + P +++ ++ C+ L ++ + +
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSG-VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 374 NMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQ 431
+ D +++V +Y + +A A + + + YN ++ ++ K+ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 432 LFQEMLKISLKPDAITFVALLSA-CRHRGLVELGEKFFMSMKEDYNVLPEIYHYACMVDM 490
+ +E+L +KPD I++ ++ A CR+ + + + F M+ + ++P++ Y +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRD-ASRIFSEMR-NSGIVPDVITYNTFIGS 743
Query: 491 YGRGNQLEKAVEFMRKIPIQIDASIWGAFLNACKINNNT 529
Y + E+A+ +R + + C+ N NT
Sbjct: 744 YAADSMFEEAIGVVRYM-----------IKHGCRPNQNT 771
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 195/503 (38%), Gaps = 70/503 (13%)
Query: 57 ALDLFARMQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSL 116
A D F + + + +D + ++++ K V M + + + L ++ +SL
Sbjct: 157 AFDWFMKQKDYQSM--LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 117 IDMYSKCGSFREAYNVF-----SGCDGVVDLVSKNAMVAACCRDGKMDMALNVFWKNPE- 170
I ++ G +REA NVF GC L++ N ++ GKM N E
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPT--LITYNVILNVF---GKMGTPWNKITSLVEK 269
Query: 171 ------FNDTVSWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSA-CTGLK 223
D ++NTLI + + A +F EM G Y++ T ++L +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 224 CLKLGKCVHALVLKNDGCSNQFVS-SGIVDFYCKCGNMRYA---ESVYAGIGIKSP-FAT 278
+ K ++ +VL +G S V+ + ++ Y + G + A ++ A G K F
Sbjct: 330 PKEAMKVLNEMVL--NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 279 SSLIAGYSSKGNMTKAKRLFDSLS----ERNYVVWTALCSGYVKSQQCEAVFKLFREFRT 334
++L++G+ G + A +F+ + + N + A Y + + K+F E
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 335 TEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIA 394
L PD + +L S + R + + + L+ YS+CG+
Sbjct: 448 C-GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 395 YAEKSFQLVTDS--DRDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALL 452
A ++ + D+ D+ YN ++A A G ++ ++ EM KP+ +T+ +LL
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 453 SA-----------------------------------CRHRGLVELGEKFFMSMKEDYNV 477
A C L+ E+ F +KE
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GF 625
Query: 478 LPEIYHYACMVDMYGRGNQLEKA 500
P+I MV +YGR + KA
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKA 648
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/525 (20%), Positives = 221/525 (42%), Gaps = 69/525 (13%)
Query: 8 SWNAIIMAYIKAHNLTQARALFDS----ASHRDLVSYNSMLSAYAGADGCDTVALDLFAR 63
++ ++I+A++K N+ +A + D +++ S+++ Y + ALDLF R
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK-ALDLFNR 370
Query: 64 MQSARDTIGMDEITLTTMLNLSAKLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKC 123
M+ + + D++ + M+ K + + + M S + ++I K
Sbjct: 371 ME--EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKA 428
Query: 124 GSFREAYNVFSGCDGVVDLVSK----NAMVAACCRDGKMDMALNVF----WKNPEFNDTV 175
S A +F+ D ++ N + C+ GK+D A + K E N V
Sbjct: 429 ESPEAALEIFN--DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN-VV 485
Query: 176 SWNTLIAGYVQNGYMERALTLFIEMIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALV 235
+N ++ + + M+ A ++F EM+EKG+E N T + ++ K + V +
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
Query: 236 LKNDGCSNQFVSSGIVDFYCKCGNMRYAESVYAGIGIKSPFATS-----SLIAGYSSKGN 290
++ +N+ + + I++ CK G A+ + + + ++ S S+I G+ G+
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
Query: 291 MTKAKRLFDSLSER----NYVVWTALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIV 346
A + +SE N V +T+L +G+ KS + + ++ E ++ E
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME---------- 655
Query: 347 NVLGACAIQATLSLGKQTHAYILRTKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDS 406
L +D AL+D + K ++ A F + +
Sbjct: 656 --------------------------LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 407 D--RDVILYNVMIAGYAHHGFENKAIQLFQEMLKISLKPDAITFVALLSACRHRGLVELG 464
+V +YN +I+G+ + G + AI L+++M+ + D T+ ++ G + L
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 465 EKFFMSMKEDYNVLP-EIYHYACMVDMYGRGNQLE--KAVEFMRK 506
+ + D ++P EI H + + +G L+ K +E M+K
Sbjct: 750 SDLYSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKK 793
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 157/386 (40%), Gaps = 55/386 (14%)
Query: 87 KLRVVCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGSFREAYNVFSGCDGV---VDLV 143
+++ + + + S M++ + + F S LID + K + A++V + + + V
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 144 SKNAMVAACCRDGKM----DMALNVFWKNPEFNDTVSWNTLIAGYVQNGYMERALTLFIE 199
N ++ C+ G+ +M N+ + S+N++I G+V+ G + A+ + E
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 200 MIEKGIEYNQHTLASVLSACTGLKCLKLGKCVHALVLKNDGCSNQFVSSGIVDFYCKCGN 259
M E G N T S+++ +CK
Sbjct: 616 MSENGKSPNVVTFTSLING-----------------------------------FCKSNR 640
Query: 260 MRYA-----ESVYAGIGIKSPFATSSLIAGYSSKGNMTKAKRLFDSLSE----RNYVVWT 310
M A E + + P A +LI G+ K +M A LF L E N V+
Sbjct: 641 MDLALEMTHEMKSMELKLDLP-AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 311 ALCSGYVKSQQCEAVFKLFREFRTTEALIPDTMIIVNVLGACAIQATLSLGKQTHAYILR 370
+L SG+ + +A L+++ + + D ++ ++L ++ +L
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKM-VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 371 TKLNMDEKLASALVDMYSKCGNIAYAEKSFQLVTDSD--RDVILYNVMIAGYAHHGFENK 428
+ DE L LV+ SK G A K + + D +V+LY+ +IAG+ G N+
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 429 AIQLFQEMLKISLKPDAITFVALLSA 454
A +L EML+ + D F L+S
Sbjct: 819 AFRLHDEMLEKGIVHDDTVFNLLVSG 844