Miyakogusa Predicted Gene

Lj4g3v0341210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0341210.1 tr|G7JCS0|G7JCS0_MEDTR Metacaspase-1 OS=Medicago
truncatula GN=MTR_4g094210 PE=4 SV=1,72.75,0,FAMILY NOT NAMED,NULL;
Peptidase_C14,Peptidase C14, caspase catalytic; no
description,NULL,CUFF.46976.1
         (387 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25110.1 | Symbols: AtMC2, MC2 | metacaspase 2 | chr4:1288773...   231   8e-61
AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 | metaca...   231   9e-61
AT5G64240.2 | Symbols: AtMC3, MC3 | metacaspase 3 | chr5:2569583...   228   6e-60
AT4G25110.2 | Symbols: AtMC2, MC2 | metacaspase 2 | chr4:1288773...   226   3e-59
AT5G64240.1 | Symbols: AtMC3, MC3 | metacaspase 3 | chr5:2569583...   189   3e-48
AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 | chr1:2984284...    93   2e-19
AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5...    92   5e-19
AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 | chr1:2983668...    91   2e-18
AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893...    89   6e-18
AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 | chr1:5612304...    85   9e-17
AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 | chr1:2983398...    84   2e-16

>AT4G25110.1 | Symbols: AtMC2, MC2 | metacaspase 2 |
           chr4:12887738-12889953 REVERSE LENGTH=418
          Length = 418

 Score =  231 bits (588), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 120/240 (50%), Positives = 151/240 (62%), Gaps = 5/240 (2%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRAV+ GVSY   K  LKG IND   MK +L+K F+FP  CI +LTE+E D    PTK+N
Sbjct: 116 KRAVIVGVSYKNTKDELKGCINDANCMKFMLMKRFQFPESCILMLTEEEADPMRWPTKNN 175

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEI 231
           I  ++ WLV  CKPGDSLVF+FSGHG  Q D   DE+DG DETL PVD    G+I D+EI
Sbjct: 176 ITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVDGFDETLLPVDHRTSGVIVDDEI 235

Query: 232 NSTIVWPLKKGVILHAIVDACHSGTILDLLH---VYNYGRGIWEDNKPPSKEPIRKHTSG 288
           N+TIV PL  GV LHAIVDACHSGT++DL +   +   G   WED++P  K  + K TSG
Sbjct: 236 NATIVRPLPYGVKLHAIVDACHSGTVMDLPYLCRMDRLGNYEWEDHRP--KTGMWKGTSG 293

Query: 289 GLAICLSACEDSQTAADSTVFGGKGMNGVLTYLFTKTIRECPEITYGRLLEKIHDEMKKI 348
           G     + C+D QT+AD+    G    G +TY F + I     +TYG LL  +   + +I
Sbjct: 294 GEVFSFTGCDDDQTSADTPQLSGSAWTGAMTYAFIQAIERGHGMTYGSLLNAMRSTVHEI 353


>AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 |
           metacaspase 1 | chr1:411883-413426 FORWARD LENGTH=367
          Length = 367

 Score =  231 bits (588), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 175/290 (60%), Gaps = 16/290 (5%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRAV+CG+SY   +  LKG IND + M+ LL+  FKF  + I +LTE+E D   IPTK N
Sbjct: 80  KRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYRIPTKQN 139

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEI 231
           +  +L WLV+ C  GDSLVF++SGHG +Q ++  DE+DG DETLCP+DF  +GMI D+EI
Sbjct: 140 MRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVDDEI 199

Query: 232 NSTIVWPLKKGVILHAIVDACHSGTILD---LLHVYNYGRGIWEDNKPPSKEPIRKHTSG 288
           N+TIV PL  GV LH+I+DACHSGT+LD   L  +   G+ +WED++P  +  + K T+G
Sbjct: 200 NATIVRPLPHGVKLHSIIDACHSGTVLDLPFLCRMNRAGQYVWEDHRP--RSGLWKGTAG 257

Query: 289 GLAICLSACEDSQTAADSTVFGGKGMNGVLTYLFTKTI-RECPEITYGRLLEKIHDEMKK 347
           G AI +S C+D QT+AD++        G +T+ F + I R     TYG LL  +   ++ 
Sbjct: 258 GEAISISGCDDDQTSADTSALSKITSTGAMTFCFIQAIERSAQGTTYGSLLNSMRTTIRN 317

Query: 348 -----INQRRCHNRILQHIFHCKIA-----QDPLLSSSEKFDVSATIFKL 387
                         +L  +     A     Q+P L++ + FDV A  F L
Sbjct: 318 TGNDGGGSGGVVTTVLSMLLTGGSAIGGLRQEPQLTACQTFDVYAKPFTL 367


>AT5G64240.2 | Symbols: AtMC3, MC3 | metacaspase 3 |
           chr5:25695836-25697249 FORWARD LENGTH=362
          Length = 362

 Score =  228 bits (581), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 169/280 (60%), Gaps = 11/280 (3%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRAVLCGV+Y  + + LKG I+D ++M+ LLV+   FP + I +LTE E     IPTK N
Sbjct: 90  KRAVLCGVNYKGKSYSLKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIPTKRN 149

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEI 231
           I +++RWLV+  +  DSLVF+FSGHG QQ D+  DEIDG DE LCP+D   EG I D+EI
Sbjct: 150 IRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEIDGQDEALCPLDHETEGKIIDDEI 209

Query: 232 NSTIVWPLKKGVILHAIVDACHSGTILDLLHVYNYGRG---IWEDNKPPSKEPIRKHTSG 288
           N  +V PL  G  LHA++DAC+SGT+LDL  +    R     WED++        K T G
Sbjct: 210 NRILVRPLVHGAKLHAVIDACNSGTVLDLPFICRMERNGSYEWEDHRSVRA---YKGTDG 266

Query: 289 GLAICLSACEDSQTAADSTVFGGKGMNGVLTYLFTKTIREC-PEITYGRLLEKIHDEMKK 347
           G A C SAC+D +++  + VF GK   G +TY F K ++   P  TYG LL  +   +++
Sbjct: 267 GAAFCFSACDDDESSGYTPVFTGKN-TGAMTYSFIKAVKTAGPAPTYGHLLNLMCSAIRE 325

Query: 348 INQRRCHNRILQHIFHCKIAQDPLLSSSEKFDVSATIFKL 387
              R   N           + +PLL+SSE+FDV AT F L
Sbjct: 326 AQSRLAFN---GDYTSSDASAEPLLTSSEEFDVYATKFVL 362


>AT4G25110.2 | Symbols: AtMC2, MC2 | metacaspase 2 |
           chr4:12887738-12889953 REVERSE LENGTH=417
          Length = 417

 Score =  226 bits (575), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/240 (50%), Positives = 150/240 (62%), Gaps = 6/240 (2%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRAV+ GVSY   K  LKG IND   MK +L+K F+FP  CI +LTE E D    PTK+N
Sbjct: 116 KRAVIVGVSYKNTKDELKGCINDANCMKFMLMKRFQFPESCILMLTE-EADPMRWPTKNN 174

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEI 231
           I  ++ WLV  CKPGDSLVF+FSGHG  Q D   DE+DG DETL PVD    G+I D+EI
Sbjct: 175 ITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVDGFDETLLPVDHRTSGVIVDDEI 234

Query: 232 NSTIVWPLKKGVILHAIVDACHSGTILDLLH---VYNYGRGIWEDNKPPSKEPIRKHTSG 288
           N+TIV PL  GV LHAIVDACHSGT++DL +   +   G   WED++P  K  + K TSG
Sbjct: 235 NATIVRPLPYGVKLHAIVDACHSGTVMDLPYLCRMDRLGNYEWEDHRP--KTGMWKGTSG 292

Query: 289 GLAICLSACEDSQTAADSTVFGGKGMNGVLTYLFTKTIRECPEITYGRLLEKIHDEMKKI 348
           G     + C+D QT+AD+    G    G +TY F + I     +TYG LL  +   + +I
Sbjct: 293 GEVFSFTGCDDDQTSADTPQLSGSAWTGAMTYAFIQAIERGHGMTYGSLLNAMRSTVHEI 352


>AT5G64240.1 | Symbols: AtMC3, MC3 | metacaspase 3 |
           chr5:25695836-25696923 FORWARD LENGTH=305
          Length = 305

 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 129/200 (64%), Gaps = 6/200 (3%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRAVLCGV+Y  + + LKG I+D ++M+ LLV+   FP + I +LTE E     IPTK N
Sbjct: 90  KRAVLCGVNYKGKSYSLKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIPTKRN 149

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEI 231
           I +++RWLV+  +  DSLVF+FSGHG QQ D+  DEIDG DE LCP+D   EG I D+EI
Sbjct: 150 IRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEIDGQDEALCPLDHETEGKIIDDEI 209

Query: 232 NSTIVWPLKKGVILHAIVDACHSGTILDLLHVYNYGRG---IWEDNKPPSKEPIRKHTSG 288
           N  +V PL  G  LHA++DAC+SGT+LDL  +    R     WED++        K T G
Sbjct: 210 NRILVRPLVHGAKLHAVIDACNSGTVLDLPFICRMERNGSYEWEDHRSVRAY---KGTDG 266

Query: 289 GLAICLSACEDSQTAADSTV 308
           G A C SAC+D +++  + V
Sbjct: 267 GAAFCFSACDDDESSGYTPV 286


>AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 |
           chr1:29842849-29844368 FORWARD LENGTH=418
          Length = 418

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           K+AVL G++Y   K  L+G +ND+R M + LV+ + F  E I VL + + +++  PT  N
Sbjct: 3   KKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTD-ESSTQPTGKN 61

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQP-DFKEDEIDGLDETLCPVDFMKEGMITDNE 230
           I  +L  LV+    GD LV ++SGHG + P +  ED+  G DE + P D     +ITD++
Sbjct: 62  IRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDM---NLITDDD 118

Query: 231 INSTIVWPLKKGVILHAIVDACHSGTILD 259
               +V  +  G  +  I D+CHSG ++D
Sbjct: 119 FRD-LVDKVPPGCRMTIISDSCHSGGLID 146


>AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5 |
           chr1:29838722-29840137 FORWARD LENGTH=410
          Length = 410

 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           K+AVL G++Y   K  L+G +ND+R + + LV  F F    I  L + + +++  PT  N
Sbjct: 3   KKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTD-ESSTKPTGKN 61

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQP-DFKEDEIDGLDETLCPVDFMKEGMITDNE 230
           I  +L  LV+  KPGD LV ++SGHG + P +  ED+  G DE + P D     +ITD+E
Sbjct: 62  IRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDM---NLITDDE 118

Query: 231 INSTIVWPLKKGVILHAIVDACHSGTILD 259
               +V  + K   +  I D+CHSG ++D
Sbjct: 119 FRD-LVEKVPKEAHITIISDSCHSGGLID 146


>AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 |
           chr1:29836686-29837908 FORWARD LENGTH=368
          Length = 368

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 6/149 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           K+A+L G++Y   K  L+G +ND+R M+  LV+ + F  E I++L + +  +++ PT  N
Sbjct: 3   KKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDS-SSIKPTGKN 61

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQP-DFKEDEIDGLDETLCPVDFMKEGMITDNE 230
           I ++L  LV+  K GD L  ++SGHG + P +  ED+  G DE + P D     +ITD++
Sbjct: 62  IRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDM---NLITDDD 118

Query: 231 INSTIVWPLKKGVILHAIVDACHSGTILD 259
               +V  + K   +  I D+CHSG ++D
Sbjct: 119 FRD-LVDMVPKDCPITIISDSCHSGGLID 146


>AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 |
           chr5:1153893-1154870 FORWARD LENGTH=325
          Length = 325

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 81/150 (54%), Gaps = 7/150 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           + AVL G +Y   +  L G IND+  MKE ++  F F  + I VLT+ E ++ + PT  N
Sbjct: 10  RLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTD-EPESKVKPTGAN 68

Query: 172 ILESLRWLVKECKP--GDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDN 229
           I  +LR +V + +   GD L F++SGHG + P  K       DE + P DF    +ITD 
Sbjct: 69  IKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDEAIVPCDF---NLITDV 125

Query: 230 EINSTIVWPLKKGVILHAIVDACHSGTILD 259
           +    +V  L KG     I D+CHSG ++D
Sbjct: 126 DFRE-LVNQLPKGTSFTMISDSCHSGGLID 154


>AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 |
           chr1:5612304-5613829 REVERSE LENGTH=381
          Length = 381

 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           K+A+L G++Y      L+G +ND+  M++ L++ + F N+ I ++ + +    + PT  N
Sbjct: 3   KKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSC-IQPTGKN 61

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEID--GLDETLCPVDFMKEGMITDN 229
           I + L  L+   + GD LVF++SGHG + P   ED  D  G DE + P D     +I D 
Sbjct: 62  ICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDM---NLIKDQ 118

Query: 230 EINSTIVWPLKKGVILHAIVDACHSGTIL 258
           +    +V  +K+G  L  I D+CHSG ++
Sbjct: 119 QFRE-MVSRVKEGCQLTIISDSCHSGGLI 146


>AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 |
           chr1:29833986-29835412 FORWARD LENGTH=403
          Length = 403

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 112 KRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHN 171
           KRA+L G++Y      L+G +ND+  M + LV  F F  E I VL + + ++   PT  N
Sbjct: 3   KRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTD-ESYTQPTGKN 61

Query: 172 ILESLRWLVKECKPGDSLVFYFSGHGLQ-QPDFKEDEIDGLDETLCPVDFMKEGMITDNE 230
           I ++L  L+K  K GD L  ++SGHG +  P+  E++  G DE + P D      I D++
Sbjct: 62  IRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDL---NPIPDDD 118

Query: 231 INSTIVWPLKKGVILHAIVDACHSGTILD 259
               +V  + +G  +  + D+CHSG ++D
Sbjct: 119 FRD-LVEQVPEGCQITIVSDSCHSGGLID 146