Miyakogusa Predicted Gene

Lj4g3v0341170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0341170.1 Non Chatacterized Hit- tr|I1KR24|I1KR24_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24999 PE,85.37,0,FAMILY
NOT NAMED,NULL; seg,NULL; DUF1084,Domain of unknown function
DUF1084,CUFF.46971.1
         (294 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication...   358   2e-99
AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein...   310   6e-85
AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF10...   274   4e-74
AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF10...   274   4e-74

>AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication 1
           | chr4:11569924-11572163 FORWARD LENGTH=291
          Length = 291

 Score =  358 bits (919), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 171/271 (63%), Positives = 210/271 (77%)

Query: 24  SNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNFV 83
           ++WW++++ES QWQ  I++ LC AYA VS VALVQL+RIQMRVPEYGWTTQKVFHLMNFV
Sbjct: 21  TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFV 80

Query: 84  VNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAHK 143
           VNG+RAVLFG +  VF + PKAL  V++++PGLLFFS YTLLVLFWAEIYHQARS P  K
Sbjct: 81  VNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDK 140

Query: 144 LRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXXX 203
           LR  Y  VN  VY  Q+ +W Y+ V   +T     K+ +AV+SF AA             
Sbjct: 141 LRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFM 200

Query: 204 XXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVYY 263
               PIES+GR+KKL+EVGSVT IC TCFLIRCV++A+SAF++D  LDVLDHP+LNL+YY
Sbjct: 201 LRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYY 260

Query: 264 LLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           ++VE++PSALVLFILRKLPP+RVS QYHPI+
Sbjct: 261 MVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291


>AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3
           | chr2:560976-562961 FORWARD LENGTH=303
          Length = 303

 Score =  310 bits (795), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 146/271 (53%), Positives = 195/271 (71%)

Query: 24  SNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNFV 83
           SNWW++++ES  WQ  I++ L   Y  VS VA++QLVRIQ+RVPEYGWTTQKVFH +NFV
Sbjct: 33  SNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFV 92

Query: 84  VNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAHK 143
           VNG+RAV+F   ++V  ++P+ L+ +++++P L FF+TY LLVLFWAEIY+QAR+     
Sbjct: 93  VNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDG 152

Query: 144 LRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXXX 203
           LRP++F +N  VY VQ+ LW+ +        +  +K+  A +S  AA             
Sbjct: 153 LRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLM 212

Query: 204 XXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVYY 263
               P+ES+GR+KKL EVG VTTIC TCFLIRC+++  +AF+E A+LDVLDHPILN +YY
Sbjct: 213 LQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYY 272

Query: 264 LLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           LLVEI+PS+LVLFILRKLPP+R   QYH IR
Sbjct: 273 LLVEILPSSLVLFILRKLPPKRGITQYHQIR 303


>AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 139/272 (51%), Positives = 190/272 (69%)

Query: 23  NSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNF 82
             NWW +++ES  WQ  I++ L   Y  VS +A++QLVRIQ+RVPEYGWTTQKVFH +NF
Sbjct: 22  GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 83  VVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAH 142
           +VNG+RA++F   +    ++P+ L+ +++++P L FF+TY LLVLFWAEIY+QAR+    
Sbjct: 82  MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 143 KLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXX 202
            LRP++F +N  VY +Q+ LW+ +        +  +K+  A +S  AA            
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 203 XXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVY 262
                P+ES+GR+KKL EVG VTTIC TCFLIRC+++   AF++ ADLDVLDHPILN +Y
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261

Query: 263 YLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           YLLVEI+PS+LVLFILRKLPP+R   QYH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293


>AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 139/272 (51%), Positives = 190/272 (69%)

Query: 23  NSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNF 82
             NWW +++ES  WQ  I++ L   Y  VS +A++QLVRIQ+RVPEYGWTTQKVFH +NF
Sbjct: 22  GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 83  VVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAH 142
           +VNG+RA++F   +    ++P+ L+ +++++P L FF+TY LLVLFWAEIY+QAR+    
Sbjct: 82  MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 143 KLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXX 202
            LRP++F +N  VY +Q+ LW+ +        +  +K+  A +S  AA            
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 203 XXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVY 262
                P+ES+GR+KKL EVG VTTIC TCFLIRC+++   AF++ ADLDVLDHPILN +Y
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261

Query: 263 YLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           YLLVEI+PS+LVLFILRKLPP+R   QYH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293