Miyakogusa Predicted Gene
- Lj4g3v0340950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0340950.1 Non Chatacterized Hit- tr|I1H4X7|I1H4X7_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,46.72,8e-18,
,CUFF.47008.1
(551 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64170.1 | Symbols: | dentin sialophosphoprotein-related | c... 137 2e-32
AT5G64170.2 | Symbols: | dentin sialophosphoprotein-related | c... 137 2e-32
AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein matc... 80 4e-15
AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 80 4e-15
AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 4e-15
AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 5e-15
>AT5G64170.1 | Symbols: | dentin sialophosphoprotein-related |
chr5:25672904-25675445 REVERSE LENGTH=566
Length = 566
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 131/225 (58%), Gaps = 26/225 (11%)
Query: 329 PSPS-FKDPSYASNMDISHGHPLEAAALKTNDNSRNPCLFHDTELLSG-----GFKSENI 382
PSPS + SY SN H +E+ T D+ LL G F +
Sbjct: 322 PSPSSASNESYTSN----HAQSIESLQGPTVDDRFRKVFETRANLLPGQDMPPSFAANTK 377
Query: 383 QSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIESSNVQENSSMSPALD 438
+SS F P QK+G EN+ H + + E+E+SN+Q +S +S +D
Sbjct: 378 KSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELETSNMQGSSCVSSVVD 425
Query: 439 KVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDSNASGQMGDDVDMAQD 498
+S + SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+ N + + +
Sbjct: 426 DISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGGNRPEKGAGSHLVTGE 485
Query: 499 ANRYTGFANMETDTNPIDRSIAHLLFHRPSDSSMLPINDPLSFKS 543
A++Y GF ++ETDTNPIDRSIAHLLFHRPSDSS+ N+ LS+KS
Sbjct: 486 ADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKS 530
>AT5G64170.2 | Symbols: | dentin sialophosphoprotein-related |
chr5:25672904-25675934 REVERSE LENGTH=616
Length = 616
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 131/225 (58%), Gaps = 26/225 (11%)
Query: 329 PSPS-FKDPSYASNMDISHGHPLEAAALKTNDNSRNPCLFHDTELLSG-----GFKSENI 382
PSPS + SY SN H +E+ T D+ LL G F +
Sbjct: 372 PSPSSASNESYTSN----HAQSIESLQGPTVDDRFRKVFETRANLLPGQDMPPSFAANTK 427
Query: 383 QSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIESSNVQENSSMSPALD 438
+SS F P QK+G EN+ H + + E+E+SN+Q +S +S +D
Sbjct: 428 KSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELETSNMQGSSCVSSVVD 475
Query: 439 KVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDSNASGQMGDDVDMAQD 498
+S + SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+ N + + +
Sbjct: 476 DISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGGNRPEKGAGSHLVTGE 535
Query: 499 ANRYTGFANMETDTNPIDRSIAHLLFHRPSDSSMLPINDPLSFKS 543
A++Y GF ++ETDTNPIDRSIAHLLFHRPSDSS+ N+ LS+KS
Sbjct: 536 ADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKS 580
>AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 162 Blast hits to 160 proteins
in 41 species: Archae - 0; Bacteria - 0; Metazoa - 23;
Fungi - 11; Plants - 118; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178275
REVERSE LENGTH=569
Length = 569
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 447 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDSNASGQMGDD----VDMAQDAN 500
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +D++ S + D + +
Sbjct: 401 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 460
Query: 501 RYTGFANMETDTNPIDRSIAHLLFHRPSD 529
RY G + E TNP DR++AHLLFHRP D
Sbjct: 461 RYAGMPDTEAVTNPTDRTVAHLLFHRPFD 489
>AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins
in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38;
Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178737
REVERSE LENGTH=648
Length = 648
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 447 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH-----NDSNASGQMGDDVDMAQDAN- 500
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH + SN + Q +V +++
Sbjct: 480 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 539
Query: 501 RYTGFANMETDTNPIDRSIAHLLFHRPSD 529
RY G + E TNP DR++AHLLFHRP D
Sbjct: 540 RYAGMPDTEAVTNPTDRTVAHLLFHRPFD 568
>AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1). |
chr3:20175792-20178482 REVERSE LENGTH=669
Length = 669
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 449 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDSNASGQMGDD----VDMAQDANRY 502
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +D++ S + D + + RY
Sbjct: 503 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 562
Query: 503 TGFANMETDTNPIDRSIAHLLFHRPSD 529
G + E TNP DR++AHLLFHRP D
Sbjct: 563 AGMPDTEAVTNPTDRTVAHLLFHRPFD 589
>AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.2). |
chr3:20175792-20178737 REVERSE LENGTH=663
Length = 663
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 449 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDSNASGQMGDD----VDMAQDANRY 502
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +D++ S + D + + RY
Sbjct: 497 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 556
Query: 503 TGFANMETDTNPIDRSIAHLLFHRPSD 529
G + E TNP DR++AHLLFHRP D
Sbjct: 557 AGMPDTEAVTNPTDRTVAHLLFHRPFD 583