Miyakogusa Predicted Gene

Lj4g3v0340780.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0340780.1 Non Chatacterized Hit- tr|K4BP61|K4BP61_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.58,8e-17,
,CUFF.46996.1
         (501 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64170.1 | Symbols:  | dentin sialophosphoprotein-related | c...   182   4e-46
AT5G64170.2 | Symbols:  | dentin sialophosphoprotein-related | c...   182   4e-46
AT3G54500.2 | Symbols:  | BEST Arabidopsis thaliana protein matc...    81   2e-15
AT3G54500.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    81   2e-15
AT3G54500.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    81   2e-15
AT3G54500.4 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    80   2e-15
AT3G12320.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    49   9e-06

>AT5G64170.1 | Symbols:  | dentin sialophosphoprotein-related |
           chr5:25672904-25675445 REVERSE LENGTH=566
          Length = 566

 Score =  182 bits (463), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 239/524 (45%), Gaps = 99/524 (18%)

Query: 2   SDHYFKSSNLDSTGGELGADDTILGDKCLMEDDTVSQYSISHISQPDNELSFLDND---- 57
           SDH F   ++D         D +L D     +D V  YS++ I   +N+LSF DN     
Sbjct: 57  SDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAENDLSFFDNGDKEK 115

Query: 58  -----GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGTEGSDDALKSDF-- 110
                GW D GNFED+D  + +CD TFG+ SLNNE +  W SS+   E +  A+  D   
Sbjct: 116 NDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPNEETAGAMTDDLKP 175

Query: 111 -KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKASPINKNLKSQMNVDHDAV 164
            K    + +    + D  NN  PN  +E   G TI D S +        KS  NV     
Sbjct: 176 DKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG-------KSSQNV----- 223

Query: 165 PASLSMFSESDMMSGVEDGLVHKPKIERKLSKPSTGKRKNGYLNNGDSDHPSTHVEQYPN 224
               S+  +  +M  VE  L                K++  +L++ D             
Sbjct: 224 -FDTSLQKKDILMLDVEANL---------------EKKQTDHLHHLDG------------ 255

Query: 225 LKQSFGDSSSGVTSQDSIHKRRPNTDSESLGCIQIQTP----LMNAEYSHTHTSKYTSLL 280
             +S G S +  T Q S   R      E +   Q   P      +  YSH +  +     
Sbjct: 256 --KSDGFSENSFTLQHSGISR------EIMDTNQYYPPSAFQQRDVPYSHFNCEQ----- 302

Query: 281 PPFSVSRSE-HDGHPSPSFKDPSYASNMDIS--HGHPLEAAALKTNDNSRNPCLFHDTEL 337
           P   VS  E   G  S +   PS ASN   +  H   +E+    T D+           L
Sbjct: 303 PSVQVSACESKSGIKSENKPSPSSASNESYTSNHAQSIESLQGPTVDDRFRKVFETRANL 362

Query: 338 LSG-----GFKSENIQSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIE 388
           L G      F +   +SS      F    P QK+G     EN+ H +        + E+E
Sbjct: 363 LPGQDMPPSFAANTKKSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELE 410

Query: 389 SSNVQENSSMSPALDKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDT 448
           +SN+Q +S +S  +D +S +  SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+  
Sbjct: 411 TSNMQGSSCVSSVVDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGG 470

Query: 449 NASGQMGDDVDMAQDANRYTGFANMETNTNPIDRSIAHLLFHRP 492
           N   +      +  +A++Y GF ++ET+TNPIDRSIAHLLFHRP
Sbjct: 471 NRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRP 514


>AT5G64170.2 | Symbols:  | dentin sialophosphoprotein-related |
           chr5:25672904-25675934 REVERSE LENGTH=616
          Length = 616

 Score =  182 bits (463), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 239/524 (45%), Gaps = 99/524 (18%)

Query: 2   SDHYFKSSNLDSTGGELGADDTILGDKCLMEDDTVSQYSISHISQPDNELSFLDND---- 57
           SDH F   ++D         D +L D     +D V  YS++ I   +N+LSF DN     
Sbjct: 107 SDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAENDLSFFDNGDKEK 165

Query: 58  -----GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGTEGSDDALKSDF-- 110
                GW D GNFED+D  + +CD TFG+ SLNNE +  W SS+   E +  A+  D   
Sbjct: 166 NDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPNEETAGAMTDDLKP 225

Query: 111 -KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKASPINKNLKSQMNVDHDAV 164
            K    + +    + D  NN  PN  +E   G TI D S +        KS  NV     
Sbjct: 226 DKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG-------KSSQNV----- 273

Query: 165 PASLSMFSESDMMSGVEDGLVHKPKIERKLSKPSTGKRKNGYLNNGDSDHPSTHVEQYPN 224
               S+  +  +M  VE  L                K++  +L++ D             
Sbjct: 274 -FDTSLQKKDILMLDVEANLE---------------KKQTDHLHHLDG------------ 305

Query: 225 LKQSFGDSSSGVTSQDSIHKRRPNTDSESLGCIQIQTP----LMNAEYSHTHTSKYTSLL 280
             +S G S +  T Q S   R      E +   Q   P      +  YSH +  +     
Sbjct: 306 --KSDGFSENSFTLQHSGISR------EIMDTNQYYPPSAFQQRDVPYSHFNCEQ----- 352

Query: 281 PPFSVSRSE-HDGHPSPSFKDPSYASNMDIS--HGHPLEAAALKTNDNSRNPCLFHDTEL 337
           P   VS  E   G  S +   PS ASN   +  H   +E+    T D+           L
Sbjct: 353 PSVQVSACESKSGIKSENKPSPSSASNESYTSNHAQSIESLQGPTVDDRFRKVFETRANL 412

Query: 338 LSG-----GFKSENIQSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIE 388
           L G      F +   +SS      F    P QK+G     EN+ H +        + E+E
Sbjct: 413 LPGQDMPPSFAANTKKSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELE 460

Query: 389 SSNVQENSSMSPALDKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDT 448
           +SN+Q +S +S  +D +S +  SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+  
Sbjct: 461 TSNMQGSSCVSSVVDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGG 520

Query: 449 NASGQMGDDVDMAQDANRYTGFANMETNTNPIDRSIAHLLFHRP 492
           N   +      +  +A++Y GF ++ET+TNPIDRSIAHLLFHRP
Sbjct: 521 NRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRP 564


>AT3G54500.2 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: dentin sialophosphoprotein-related
           (TAIR:AT5G64170.1); Has 162 Blast hits to 160 proteins
           in 41 species: Archae - 0; Bacteria - 0; Metazoa - 23;
           Fungi - 11; Plants - 118; Viruses - 0; Other Eukaryotes
           - 10 (source: NCBI BLink). | chr3:20175792-20178275
           REVERSE LENGTH=569
          Length = 569

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 6/87 (6%)

Query: 412 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDAN 465
             +LQ ++ +LD+ T+ CIRDSL+RLA SA QRH  +DT+ S +   D    +   +   
Sbjct: 401 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 460

Query: 466 RYTGFANMETNTNPIDRSIAHLLFHRP 492
           RY G  + E  TNP DR++AHLLFHRP
Sbjct: 461 RYAGMPDTEAVTNPTDRTVAHLLFHRP 487


>AT3G54500.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: dentin sialophosphoprotein-related
           (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins
           in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38;
           Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes
           - 10 (source: NCBI BLink). | chr3:20175792-20178737
           REVERSE LENGTH=648
          Length = 648

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 6/87 (6%)

Query: 412 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDAN 465
             +LQ ++ +LD+ T+ CIRDSL+RLA SA QRH  +DT+ S +   D    +   +   
Sbjct: 480 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 539

Query: 466 RYTGFANMETNTNPIDRSIAHLLFHRP 492
           RY G  + E  TNP DR++AHLLFHRP
Sbjct: 540 RYAGMPDTEAVTNPTDRTVAHLLFHRP 566


>AT3G54500.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: dentin
           sialophosphoprotein-related (TAIR:AT5G64170.1). |
           chr3:20175792-20178482 REVERSE LENGTH=669
          Length = 669

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%)

Query: 414 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDANRY 467
           +LQ ++ +LD+ T+ CIRDSL+RLA SA QRH  +DT+ S +   D    +   +   RY
Sbjct: 503 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 562

Query: 468 TGFANMETNTNPIDRSIAHLLFHRP 492
            G  + E  TNP DR++AHLLFHRP
Sbjct: 563 AGMPDTEAVTNPTDRTVAHLLFHRP 587


>AT3G54500.4 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: dentin
           sialophosphoprotein-related (TAIR:AT5G64170.2). |
           chr3:20175792-20178737 REVERSE LENGTH=663
          Length = 663

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%)

Query: 414 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDANRY 467
           +LQ ++ +LD+ T+ CIRDSL+RLA SA QRH  +DT+ S +   D    +   +   RY
Sbjct: 497 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 556

Query: 468 TGFANMETNTNPIDRSIAHLLFHRP 492
            G  + E  TNP DR++AHLLFHRP
Sbjct: 557 AGMPDTEAVTNPTDRTVAHLLFHRP 581


>AT3G12320.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins
           in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes -
           4 (source: NCBI BLink). | chr3:3924034-3925262 FORWARD
           LENGTH=269
          Length = 269

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 403 DKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDTNASGQ---MGDDVD 459
           D++S +      LQ+   +L  +T+ C RD+ YRLA+S++ + +  + + +   M     
Sbjct: 163 DELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLARSSQDKSDSVSPNSEELLMQTSRY 222

Query: 460 MAQDANRYTGFANMETNTNPIDRSIAHLLFHR 491
              D NR++    +E+ TN IDR++A+L F++
Sbjct: 223 DYGDGNRFSREEEIESETNSIDRAVANLTFNK 254