Miyakogusa Predicted Gene
- Lj4g3v0340780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0340780.1 Non Chatacterized Hit- tr|K4BP61|K4BP61_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.58,8e-17,
,CUFF.46996.1
(501 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64170.1 | Symbols: | dentin sialophosphoprotein-related | c... 182 4e-46
AT5G64170.2 | Symbols: | dentin sialophosphoprotein-related | c... 182 4e-46
AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein matc... 81 2e-15
AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 81 2e-15
AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 2e-15
AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 2e-15
AT3G12320.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 49 9e-06
>AT5G64170.1 | Symbols: | dentin sialophosphoprotein-related |
chr5:25672904-25675445 REVERSE LENGTH=566
Length = 566
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 239/524 (45%), Gaps = 99/524 (18%)
Query: 2 SDHYFKSSNLDSTGGELGADDTILGDKCLMEDDTVSQYSISHISQPDNELSFLDND---- 57
SDH F ++D D +L D +D V YS++ I +N+LSF DN
Sbjct: 57 SDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAENDLSFFDNGDKEK 115
Query: 58 -----GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGTEGSDDALKSDF-- 110
GW D GNFED+D + +CD TFG+ SLNNE + W SS+ E + A+ D
Sbjct: 116 NDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPNEETAGAMTDDLKP 175
Query: 111 -KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKASPINKNLKSQMNVDHDAV 164
K + + + D NN PN +E G TI D S + KS NV
Sbjct: 176 DKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG-------KSSQNV----- 223
Query: 165 PASLSMFSESDMMSGVEDGLVHKPKIERKLSKPSTGKRKNGYLNNGDSDHPSTHVEQYPN 224
S+ + +M VE L K++ +L++ D
Sbjct: 224 -FDTSLQKKDILMLDVEANL---------------EKKQTDHLHHLDG------------ 255
Query: 225 LKQSFGDSSSGVTSQDSIHKRRPNTDSESLGCIQIQTP----LMNAEYSHTHTSKYTSLL 280
+S G S + T Q S R E + Q P + YSH + +
Sbjct: 256 --KSDGFSENSFTLQHSGISR------EIMDTNQYYPPSAFQQRDVPYSHFNCEQ----- 302
Query: 281 PPFSVSRSE-HDGHPSPSFKDPSYASNMDIS--HGHPLEAAALKTNDNSRNPCLFHDTEL 337
P VS E G S + PS ASN + H +E+ T D+ L
Sbjct: 303 PSVQVSACESKSGIKSENKPSPSSASNESYTSNHAQSIESLQGPTVDDRFRKVFETRANL 362
Query: 338 LSG-----GFKSENIQSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIE 388
L G F + +SS F P QK+G EN+ H + + E+E
Sbjct: 363 LPGQDMPPSFAANTKKSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELE 410
Query: 389 SSNVQENSSMSPALDKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDT 448
+SN+Q +S +S +D +S + SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+
Sbjct: 411 TSNMQGSSCVSSVVDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGG 470
Query: 449 NASGQMGDDVDMAQDANRYTGFANMETNTNPIDRSIAHLLFHRP 492
N + + +A++Y GF ++ET+TNPIDRSIAHLLFHRP
Sbjct: 471 NRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRP 514
>AT5G64170.2 | Symbols: | dentin sialophosphoprotein-related |
chr5:25672904-25675934 REVERSE LENGTH=616
Length = 616
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 239/524 (45%), Gaps = 99/524 (18%)
Query: 2 SDHYFKSSNLDSTGGELGADDTILGDKCLMEDDTVSQYSISHISQPDNELSFLDND---- 57
SDH F ++D D +L D +D V YS++ I +N+LSF DN
Sbjct: 107 SDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAENDLSFFDNGDKEK 165
Query: 58 -----GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGTEGSDDALKSDF-- 110
GW D GNFED+D + +CD TFG+ SLNNE + W SS+ E + A+ D
Sbjct: 166 NDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPNEETAGAMTDDLKP 225
Query: 111 -KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKASPINKNLKSQMNVDHDAV 164
K + + + D NN PN +E G TI D S + KS NV
Sbjct: 226 DKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG-------KSSQNV----- 273
Query: 165 PASLSMFSESDMMSGVEDGLVHKPKIERKLSKPSTGKRKNGYLNNGDSDHPSTHVEQYPN 224
S+ + +M VE L K++ +L++ D
Sbjct: 274 -FDTSLQKKDILMLDVEANLE---------------KKQTDHLHHLDG------------ 305
Query: 225 LKQSFGDSSSGVTSQDSIHKRRPNTDSESLGCIQIQTP----LMNAEYSHTHTSKYTSLL 280
+S G S + T Q S R E + Q P + YSH + +
Sbjct: 306 --KSDGFSENSFTLQHSGISR------EIMDTNQYYPPSAFQQRDVPYSHFNCEQ----- 352
Query: 281 PPFSVSRSE-HDGHPSPSFKDPSYASNMDIS--HGHPLEAAALKTNDNSRNPCLFHDTEL 337
P VS E G S + PS ASN + H +E+ T D+ L
Sbjct: 353 PSVQVSACESKSGIKSENKPSPSSASNESYTSNHAQSIESLQGPTVDDRFRKVFETRANL 412
Query: 338 LSG-----GFKSENIQSSTP----FKSPGPAQKVGHRFEDENEGHSEVGGTSIGFSQEIE 388
L G F + +SS F P QK+G EN+ H + + E+E
Sbjct: 413 LPGQDMPPSFAANTKKSSKTDSMVFPDAAPIQKIGL----END-HRKA-------ATELE 460
Query: 389 SSNVQENSSMSPALDKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDT 448
+SN+Q +S +S +D +S + SF QLQQ+++QLD++TKLCIRDSLYRLAKSAEQRH+
Sbjct: 461 TSNMQGSSCVSSVVDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGG 520
Query: 449 NASGQMGDDVDMAQDANRYTGFANMETNTNPIDRSIAHLLFHRP 492
N + + +A++Y GF ++ET+TNPIDRSIAHLLFHRP
Sbjct: 521 NRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRP 564
>AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 162 Blast hits to 160 proteins
in 41 species: Archae - 0; Bacteria - 0; Metazoa - 23;
Fungi - 11; Plants - 118; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178275
REVERSE LENGTH=569
Length = 569
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 412 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDAN 465
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +DT+ S + D + +
Sbjct: 401 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 460
Query: 466 RYTGFANMETNTNPIDRSIAHLLFHRP 492
RY G + E TNP DR++AHLLFHRP
Sbjct: 461 RYAGMPDTEAVTNPTDRTVAHLLFHRP 487
>AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins
in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38;
Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178737
REVERSE LENGTH=648
Length = 648
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 412 FCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDAN 465
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +DT+ S + D + +
Sbjct: 480 LYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRY 539
Query: 466 RYTGFANMETNTNPIDRSIAHLLFHRP 492
RY G + E TNP DR++AHLLFHRP
Sbjct: 540 RYAGMPDTEAVTNPTDRTVAHLLFHRP 566
>AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1). |
chr3:20175792-20178482 REVERSE LENGTH=669
Length = 669
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 414 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDANRY 467
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +DT+ S + D + + RY
Sbjct: 503 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 562
Query: 468 TGFANMETNTNPIDRSIAHLLFHRP 492
G + E TNP DR++AHLLFHRP
Sbjct: 563 AGMPDTEAVTNPTDRTVAHLLFHRP 587
>AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.2). |
chr3:20175792-20178737 REVERSE LENGTH=663
Length = 663
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 414 QLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRH--NDTNASGQMGDD----VDMAQDANRY 467
+LQ ++ +LD+ T+ CIRDSL+RLA SA QRH +DT+ S + D + + RY
Sbjct: 497 RLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRY 556
Query: 468 TGFANMETNTNPIDRSIAHLLFHRP 492
G + E TNP DR++AHLLFHRP
Sbjct: 557 AGMPDTEAVTNPTDRTVAHLLFHRP 581
>AT3G12320.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink). | chr3:3924034-3925262 FORWARD
LENGTH=269
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 403 DKVSHQTNSFCQLQQIMDQLDIKTKLCIRDSLYRLAKSAEQRHNDTNASGQ---MGDDVD 459
D++S + LQ+ +L +T+ C RD+ YRLA+S++ + + + + + M
Sbjct: 163 DELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLARSSQDKSDSVSPNSEELLMQTSRY 222
Query: 460 MAQDANRYTGFANMETNTNPIDRSIAHLLFHR 491
D NR++ +E+ TN IDR++A+L F++
Sbjct: 223 DYGDGNRFSREEEIESETNSIDRAVANLTFNK 254