Miyakogusa Predicted Gene

Lj4g3v0336950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0336950.1 Non Chatacterized Hit- tr|B8AEB3|B8AEB3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,44.71,0.0000000000005,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Galactose oxidase,
beta-propeller,gene.g52069.t1.1
         (179 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22040.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...   199   7e-52
AT1G55270.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    57   7e-09
AT1G30090.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    56   1e-08
AT2G24540.1 | Symbols: AFR | Galactose oxidase/kelch repeat supe...    52   3e-07

>AT1G22040.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:7768370-7769797 FORWARD
           LENGTH=475
          Length = 475

 Score =  199 bits (507), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 100/190 (52%), Positives = 127/190 (66%), Gaps = 14/190 (7%)

Query: 1   MSSYRGRLFVPQSLYCWPFFVDAGGEVYDPNVNSWLEMPIGMSEGWPARQAGTKLCVAVN 60
           M+ Y GRL VPQSLY WPFFVD GGEVYDP  N W+EMP GM EGWPARQAGTKL V V+
Sbjct: 289 MTCYNGRLCVPQSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVD 348

Query: 61  DVLYALDPSDSLDSTAKIKVYDFEGDAWKVAAGDVPIHDSADLESPYLLAGLLGKLHVIT 120
             LYA DPS S+++  KIKVYD + D WKV  G+VP++D  D ESPYLLAG  GKLH IT
Sbjct: 349 GELYAFDPSSSMEN-GKIKVYDQKEDTWKVVIGEVPVYDLTDSESPYLLAGFHGKLHFIT 407

Query: 121 TDGDHNIVVLQGDMQN-----------GLAFSKFSEDGESSAETEKEFWRVLATRSGRSA 169
            D +HN+ VL+ D+ N            ++      +  + ++T    W+++AT+   +A
Sbjct: 408 RDPNHNVTVLRADVPNIPVSSSSSSSSSVSIPHLKTNAPNKSDTVT--WKLIATKDFGAA 465

Query: 170 ELVSCQTLEI 179
           ELVSCQ ++I
Sbjct: 466 ELVSCQVIDI 475


>AT1G55270.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:20618333-20619925 REVERSE
           LENGTH=434
          Length = 434

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 26  EVYDPNVNSWLEMPIGMSEGWPARQAGTKLCVAVNDVLYALDPSDSLDSTAKIKVYDFEG 85
           E YDP VNSW  +  GM  GW         C ++N  LY LD  D      K++V+D   
Sbjct: 292 EAYDPEVNSWSPVSDGMVAGW------RNPCTSLNGRLYGLDCRDG----CKLRVFDEST 341

Query: 86  DAW-KVAAGDVPIHDSADLESPYLLAGLLGKLHVITTDGDHNIV-VLQGDMQNGLAFSKF 143
           D+W K       + +S  LE+  L+  L  KL +I  +   ++V V   D  N   +   
Sbjct: 342 DSWNKFMDSKAHLGNSKSLEAAALVP-LHNKLCIIRNNMSMSLVDVSNPDKNNPRLWENI 400

Query: 144 SEDGESSAETEKEFWRVLATRSGRSAELVSCQTLE 178
           +  G+S +      W  +A R+ +S  +V CQ L+
Sbjct: 401 AVKGQSKS-ILSNIWSSIAGRALKS-HIVHCQVLQ 433


>AT1G30090.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:10559746-10560942 REVERSE
           LENGTH=398
          Length = 398

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 16/98 (16%)

Query: 1   MSSY-----RGRLFVPQSLYCWPFFVDAGGEVYDPNVNSWLEMPIGMSEGWPARQAGTKL 55
           M+SY      G+L V +  + WPFFV   G+VYDP  + W  M +G+ EGW      T  
Sbjct: 245 MASYDTAVLNGKLLVTEG-WLWPFFVSPRGQVYDPRTDQWETMSMGLREGW------TGT 297

Query: 56  CVAVNDVLYALDPSDSLDSTAKIKVYDFEGDAWKVAAG 93
            V + D L+ +   + +    K+KVYD   D+W+   G
Sbjct: 298 SVVIYDRLFIVSELERM----KMKVYDPVTDSWETING 331


>AT2G24540.1 | Symbols: AFR | Galactose oxidase/kelch repeat
           superfamily protein | chr2:10426414-10427532 FORWARD
           LENGTH=372
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 29/166 (17%)

Query: 15  YCWPFFVDAGGEVYDPNVNSWLEMPIGMSEGWPARQAGTKLCVAVNDVLYALDPSDSLDS 74
           + WPF     G+VYD +  +W EM  GM EGW      T + V + D L+ +        
Sbjct: 235 WAWPFMFPPMGQVYDSDEGTWREMSGGMKEGW------TGVSVVIRDRLFVISEHGDF-- 286

Query: 75  TAKIKVYDFEGDAWKVAAGDVPIHDSADLESPYLLAGLLGKLHVITTDGDHNIVVLQGDM 134
              +KVY  + D W+  +G+        +  P+ + G   ++ V+ +     I V +G +
Sbjct: 287 --PMKVYCSDDDTWRYVSGEK--LQGEKMRRPFAVTGADDRVFVVAS----GINVAEGRV 338

Query: 135 QNGLAFSKFSEDGESSAETEKEFWRVLAT-RSGRSAELVSCQTLEI 179
             G       ++G+ S E     WR++++ +S       SC  L +
Sbjct: 339 SEG-------QNGDFSVE-----WRMVSSPKSSIQFSPASCHVLYV 372