Miyakogusa Predicted Gene

Lj4g3v0336810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0336810.1 Non Chatacterized Hit- tr|A5B610|A5B610_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.81,0.000000000007,Mito_carr,Mitochondrial substrate/solute
carrier; no description,Mitochondrial carrier domain;
SUBFA,CUFF.46911.1
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15010.2 | Symbols:  | Mitochondrial substrate carrier family...   430   e-120
AT4G15010.3 | Symbols:  | Mitochondrial substrate carrier family...   430   e-120
AT4G15010.1 | Symbols:  | Mitochondrial substrate carrier family...   430   e-120
AT1G79900.1 | Symbols: ATMBAC2, BAC2 | Mitochondrial substrate c...    55   6e-08
AT2G33820.1 | Symbols: ATMBAC1, MBAC1 | Mitochondrial substrate ...    53   4e-07

>AT4G15010.2 | Symbols:  | Mitochondrial substrate carrier family
           protein | chr4:8573125-8574864 REVERSE LENGTH=378
          Length = 378

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/375 (54%), Positives = 256/375 (68%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           MD L +N  FA H IA + SV+L T   YPLDTIK + QVGS   K+L++ +V  RVL  
Sbjct: 1   MDKLLENHQFATHAIAASASVSLGTALAYPLDTIKTIIQVGSGPNKKLSSFQVFNRVLRF 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SG +GL+SG G L  GR  G GARFGVYEIL AF KDGR DNYV   EA LAG+  GA E
Sbjct: 61  SGYSGLYSGLGSLTLGRISGFGARFGVYEILTAFYKDGRHDNYVSVGEAFLAGLVGGAAE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
           T ++SPFELIK+R QV++AS  P+++   E     P++ +LL     + +SL Q V L+S
Sbjct: 121 TVMTSPFELIKVRKQVTAASRAPNASAVAETAPVSPMITKLLRRYTLDVKSLTQTVSLLS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
            L  K+ N+  AL EYPW MTG+G PPS  +V+RP D+ SLEG+  LWR  RSGL+RD +
Sbjct: 181 VLNHKHPNMTAALQEYPWMMTGTGNPPSAMDVKRPLDVASLEGYRALWRNLRSGLIRDCI 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           +GG+FFS+WQ LH+AM+ WKAVGMNP P   EEVGPLSP                  H F
Sbjct: 241 YGGVFFSTWQFLHEAMVGWKAVGMNPLPSSEEEVGPLSPVAISLAAGISGAVAAAASHSF 300

Query: 301 DTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLA 360
           DTARTR QC +LPKY + ERKFLKW + G + ER TGIHP+DRN+LFRG+G+RMARS +A
Sbjct: 301 DTARTRAQCVILPKYTAKERKFLKWNKPGKRLERWTGIHPTDRNLLFRGIGMRMARSSVA 360

Query: 361 SFMVVGSYFFVVDHL 375
           S ++VGSY+  VD L
Sbjct: 361 STVIVGSYYLAVDLL 375


>AT4G15010.3 | Symbols:  | Mitochondrial substrate carrier family
           protein | chr4:8573125-8574864 REVERSE LENGTH=378
          Length = 378

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/375 (54%), Positives = 256/375 (68%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           MD L +N  FA H IA + SV+L T   YPLDTIK + QVGS   K+L++ +V  RVL  
Sbjct: 1   MDKLLENHQFATHAIAASASVSLGTALAYPLDTIKTIIQVGSGPNKKLSSFQVFNRVLRF 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SG +GL+SG G L  GR  G GARFGVYEIL AF KDGR DNYV   EA LAG+  GA E
Sbjct: 61  SGYSGLYSGLGSLTLGRISGFGARFGVYEILTAFYKDGRHDNYVSVGEAFLAGLVGGAAE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
           T ++SPFELIK+R QV++AS  P+++   E     P++ +LL     + +SL Q V L+S
Sbjct: 121 TVMTSPFELIKVRKQVTAASRAPNASAVAETAPVSPMITKLLRRYTLDVKSLTQTVSLLS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
            L  K+ N+  AL EYPW MTG+G PPS  +V+RP D+ SLEG+  LWR  RSGL+RD +
Sbjct: 181 VLNHKHPNMTAALQEYPWMMTGTGNPPSAMDVKRPLDVASLEGYRALWRNLRSGLIRDCI 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           +GG+FFS+WQ LH+AM+ WKAVGMNP P   EEVGPLSP                  H F
Sbjct: 241 YGGVFFSTWQFLHEAMVGWKAVGMNPLPSSEEEVGPLSPVAISLAAGISGAVAAAASHSF 300

Query: 301 DTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLA 360
           DTARTR QC +LPKY + ERKFLKW + G + ER TGIHP+DRN+LFRG+G+RMARS +A
Sbjct: 301 DTARTRAQCVILPKYTAKERKFLKWNKPGKRLERWTGIHPTDRNLLFRGIGMRMARSSVA 360

Query: 361 SFMVVGSYFFVVDHL 375
           S ++VGSY+  VD L
Sbjct: 361 STVIVGSYYLAVDLL 375


>AT4G15010.1 | Symbols:  | Mitochondrial substrate carrier family
           protein | chr4:8573125-8574864 REVERSE LENGTH=378
          Length = 378

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/375 (54%), Positives = 256/375 (68%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           MD L +N  FA H IA + SV+L T   YPLDTIK + QVGS   K+L++ +V  RVL  
Sbjct: 1   MDKLLENHQFATHAIAASASVSLGTALAYPLDTIKTIIQVGSGPNKKLSSFQVFNRVLRF 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SG +GL+SG G L  GR  G GARFGVYEIL AF KDGR DNYV   EA LAG+  GA E
Sbjct: 61  SGYSGLYSGLGSLTLGRISGFGARFGVYEILTAFYKDGRHDNYVSVGEAFLAGLVGGAAE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
           T ++SPFELIK+R QV++AS  P+++   E     P++ +LL     + +SL Q V L+S
Sbjct: 121 TVMTSPFELIKVRKQVTAASRAPNASAVAETAPVSPMITKLLRRYTLDVKSLTQTVSLLS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
            L  K+ N+  AL EYPW MTG+G PPS  +V+RP D+ SLEG+  LWR  RSGL+RD +
Sbjct: 181 VLNHKHPNMTAALQEYPWMMTGTGNPPSAMDVKRPLDVASLEGYRALWRNLRSGLIRDCI 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           +GG+FFS+WQ LH+AM+ WKAVGMNP P   EEVGPLSP                  H F
Sbjct: 241 YGGVFFSTWQFLHEAMVGWKAVGMNPLPSSEEEVGPLSPVAISLAAGISGAVAAAASHSF 300

Query: 301 DTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLA 360
           DTARTR QC +LPKY + ERKFLKW + G + ER TGIHP+DRN+LFRG+G+RMARS +A
Sbjct: 301 DTARTRAQCVILPKYTAKERKFLKWNKPGKRLERWTGIHPTDRNLLFRGIGMRMARSSVA 360

Query: 361 SFMVVGSYFFVVDHL 375
           S ++VGSY+  VD L
Sbjct: 361 STVIVGSYYLAVDLL 375


>AT1G79900.1 | Symbols: ATMBAC2, BAC2 | Mitochondrial substrate
           carrier family protein | chr1:30052524-30053599 REVERSE
           LENGTH=296
          Length = 296

 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 37/261 (14%)

Query: 29  YPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRTFGLGARFGVY 88
           YPLDT+++  Q  S +G   +A  +L R+L++ G + L+ G        TF     F +Y
Sbjct: 31  YPLDTLRIRQQQSSKSG---SAFSILRRMLAIEGPSSLYRGMAAPLASVTFQNAMVFQIY 87

Query: 89  EILAAFSKDGREDNYVYPSE--ALLAGMAAGAIETFISSPFELIKLRMQVSSASYIPSS- 145
            I +  S D        PS     L G+A GA+++ + +P ELIK+R+Q+      P + 
Sbjct: 88  AIFSR-SFDSSVPLVEPPSYRGVALGGVATGAVQSLLLTPVELIKIRLQLQQTKSGPITL 146

Query: 146 -NFALEEGGRKPLVARLL---------------------NGCHPEKRSLNQYVDLISTLK 183
               L   G + L   L                         HP  R   Q       + 
Sbjct: 147 AKSILRRQGLQGLYRGLTITVLRDAPAHGLYFWTYEYVRERLHPGCRKTGQENLRTMLVA 206

Query: 184 PKNANLEGALLEYPWTMT------GSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVR 237
              A +   +  YP  +       G G    + +  R S  +  EG++ LWRG  + + R
Sbjct: 207 GGLAGVASWVACYPLDVVKTRLQQGHGAYEGIADCFRKS--VKQEGYTVLWRGLGTAVAR 264

Query: 238 DSVFGGIFFSSWQLLHQAMLD 258
             V  G  F+++++  + + +
Sbjct: 265 AFVVNGAIFAAYEVALRCLFN 285


>AT2G33820.1 | Symbols: ATMBAC1, MBAC1 | Mitochondrial substrate
           carrier family protein | chr2:14306293-14308293 REVERSE
           LENGTH=311
          Length = 311

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 15  IAGAGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYG 71
           +AG  +VA+     +P DT+KV  Q  ++  + L   N      R+L   G  GL+ G  
Sbjct: 23  MAGLATVAVG----HPFDTVKVKLQKHNTDVQGLRYKNGLHCASRILQTEGVKGLYRGAT 78

Query: 72  WLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIK 131
               G  F     FG+Y     F +    D+   P   + + M  GAI +F+  P EL+K
Sbjct: 79  SSFMGMAFESSLMFGIYSQAKLFLRGTLPDDGPRPEIIVPSAMFGGAIISFVLCPTELVK 138

Query: 132 LRMQVS-SASYIPS 144
            RMQ+  + S +P+
Sbjct: 139 CRMQIQGTDSLVPN 152