Miyakogusa Predicted Gene

Lj4g3v0335890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0335890.1 Non Chatacterized Hit- tr|K3YY10|K3YY10_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,33.67,3e-18,DUF793,Protein BYPASS-related; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.46855.1
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |...   337   6e-93
AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |...   335   3e-92
AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |...   330   1e-90
AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corn...   193   2e-49
AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |...   147   1e-35
AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |...   102   3e-22

>AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:27982737-27983930 FORWARD LENGTH=397
          Length = 397

 Score =  337 bits (865), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 249/380 (65%), Gaps = 13/380 (3%)

Query: 24  RQEQVHSVEASN---ESDSCNLELGSFQKRVADRFHDLSGVSDDELLSIDWIQKLLTAFI 80
           R   V+SVE++    E      EL SFQ++VA+RF DL+  S ++LLS++W+ KLL +F+
Sbjct: 19  RDTAVNSVESTTVTPELTQMEAELVSFQRKVAERFIDLNASSCEDLLSLEWVGKLLDSFL 78

Query: 81  CCQEEFRAILLNNKEQVSKTPLDRMISEFFDRSVKALDICNASRDGIEKIRMWQKHLEIV 140
            CQEEFR+I++N++  ++K P+DR++S++F+RSVKALD+CNA RDG+E+IR WQK +EIV
Sbjct: 79  SCQEEFRSIVINHRSMITKPPMDRLVSDYFERSVKALDVCNAIRDGVEQIRQWQKLIEIV 138

Query: 141 ICAMGSN------KRSLTEGQFXXXXXXXXXXXXXX---XXXXXSGAVLSQRHRSFGRHN 191
           ICA  +N      KR L EGQF                      S      R+RSFGR N
Sbjct: 139 ICAFNNNGGGSSGKRPLGEGQFRRARKTLIELAIGMLDEKDSSSSSVSSQHRNRSFGR-N 197

Query: 192 SSKDXXXXXXXXXXXXXXXXXXXXAAKQLQSIASNLVPPRATEIAATSRLAITVYTMNCI 251
             +                     A+KQLQ+I +NL  PRA++I AT+ L + VYTM  +
Sbjct: 198 KEQLHHRTIGHFRSLSWSVSRSWSASKQLQAIGNNLATPRASDITATNGLIVPVYTMTTV 257

Query: 252 LLLVLWTLVAAIPCQDRGLNIHFSVPRQFSWSTPVTSLYDRIMDESKKRERRNSNGLLKE 311
           LL V+W LVAAIPCQDRGL +HF+VPR + W   + SL+DRI++ESKKRER+N+ GLLKE
Sbjct: 258 LLFVMWALVAAIPCQDRGLQVHFNVPRNYQWGGSLMSLHDRIIEESKKRERKNTCGLLKE 317

Query: 312 IYQVELSTRHMTDLVDSAQFPLTEEQKMEVEQDLKVLMDVCEAFRGGLDLLERQVREVFR 371
           I+Q E ++R M +LVDS QFPL+EE++MEV + ++ L  + EA + GLD  ER+VREVF 
Sbjct: 318 IHQFEKTSRLMNELVDSVQFPLSEEKEMEVRERVEELGKLQEALKNGLDPFERKVREVFH 377

Query: 372 KIMTCRTEGLDYLGTSTHAE 391
           +I+  RTEGLD +G    +E
Sbjct: 378 RIVRSRTEGLDTVGKHHGSE 397


>AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:6464125-6465273 FORWARD LENGTH=382
          Length = 382

 Score =  335 bits (859), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 171/352 (48%), Positives = 240/352 (68%), Gaps = 6/352 (1%)

Query: 35  NESDSCNLELGSFQKRVADRFHDLSGVSDDELLSIDWIQKLLTAFICCQEEFRAILLNNK 94
           +E  +  +EL SFQ++VA++F DL+  S+D LLS++WI KLL +F+CCQEEFRAI+ N++
Sbjct: 35  HEPSTMEVELDSFQRQVAEKFIDLNASSND-LLSLEWIGKLLDSFLCCQEEFRAIVFNHR 93

Query: 95  EQVSKTPLDRMISEFFDRSVKALDICNASRDGIEKIRMWQKHLEIVICAMGSNKRSLTEG 154
            Q+SK+P+DR+IS++F+RS+KALD+CNA RDGIE+IR W+K  +IVI A+ S+ R + EG
Sbjct: 94  SQISKSPMDRLISDYFERSIKALDVCNAIRDGIEQIRQWEKLADIVISALDSH-RPIGEG 152

Query: 155 QFXXXXXXXXXXXXXX--XXXXXSGAVLSQRHRSFGRHNSSKDXXXXXXXXXXXXXXXXX 212
           Q                      SG  L+ R+RSFGR   S                   
Sbjct: 153 QLRRAKKALIDLAIGMLDEKDHPSGTNLAHRNRSFGRVKDSH--HRSIGHFRSLSWSVSR 210

Query: 213 XXXAAKQLQSIASNLVPPRATEIAATSRLAITVYTMNCILLLVLWTLVAAIPCQDRGLNI 272
              A+KQLQ++ASNL  PR  ++ A++ LA+ VYTM  +LL V+W LVAAIPCQDRGL +
Sbjct: 211 SWSASKQLQALASNLATPRPNDVVASNGLAVPVYTMTSVLLFVMWVLVAAIPCQDRGLQV 270

Query: 273 HFSVPRQFSWSTPVTSLYDRIMDESKKRERRNSNGLLKEIYQVELSTRHMTDLVDSAQFP 332
           +F VPR F W+ PV SL+D+I++ESK+R+R+N  GLLKEI ++E S+R M +L+DS  FP
Sbjct: 271 NFFVPRHFQWAAPVMSLHDKIVEESKRRDRKNCCGLLKEIDRIEKSSRLMNELIDSIHFP 330

Query: 333 LTEEQKMEVEQDLKVLMDVCEAFRGGLDLLERQVREVFRKIMTCRTEGLDYL 384
           L +++++EV+Q +  L+ V EA R GLD  ER+VREVF +I+  RTE LD L
Sbjct: 331 LNDDKEVEVKQRVDELVQVREALRNGLDPFERKVREVFHRIVRSRTESLDSL 382


>AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:16436445-16437686 REVERSE LENGTH=413
          Length = 413

 Score =  330 bits (845), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 174/368 (47%), Positives = 251/368 (68%), Gaps = 10/368 (2%)

Query: 23  VRQEQVHSVEASNESD--SCNLELGSFQKRVADRFHDLSGVSDD-ELLSIDWIQKLLTAF 79
           +R++Q H ++ ++ S+  +  +EL SFQ++VA++F DL+  +D+ E+LS++WI KLL +F
Sbjct: 45  LRRDQAHLMDPTSFSEPMTMEVELDSFQRQVAEKFIDLNASADEAEILSLEWIGKLLDSF 104

Query: 80  ICCQEEFRAILLNNKEQVSKTPLDRMISEFFDRSVKALDICNASRDGIEKIRMWQKHLEI 139
           +CCQE+FR I+ N+K Q+ K P+DR+I E+F+RSVKALD+CNA RDGIE+IR WQK +EI
Sbjct: 105 LCCQEDFRVIIFNHKPQLLKQPMDRLIEEYFERSVKALDVCNAIRDGIEQIRQWQKLIEI 164

Query: 140 VICAMGSNKRSLTEGQFXXXXXXXXXXXXXXXXXXXSGAVLSQRHRSFGRHNSSKDXXXX 199
           VI A+ +N+R L EG+                    S    + R+RSF R   +KD    
Sbjct: 165 VISALDTNQRQLGEGEIHRAKKALIDLAIGMLDEKDSSN--THRNRSFTR---NKDHNQH 219

Query: 200 XXXXXXXXXXXXXXXXAAKQLQSIASNLVPPRATEIAATSRLAITVYTMNCILLLVLWTL 259
                           A++QLQ I +NL  PRA+++ AT+ LA+TVYTM  ILL V W L
Sbjct: 220 IGYIRSLSWSVSRSWSASRQLQGIGNNLATPRASDVMATNGLALTVYTMTSILLFVTWVL 279

Query: 260 VAAIPCQDRGLNIHFSVPRQFSWSTPVTSLYDRIMDESKKRERRNSN-GLLKEIYQVELS 318
           VAAIPCQDRGL++HF  PR F W+ PV SL+D+IMDESKKR+++    GLL+EI Q+E +
Sbjct: 280 VAAIPCQDRGLHVHFYFPRHFQWAVPVMSLHDKIMDESKKRDKKKKGCGLLREINQIERN 339

Query: 319 TRHMTDLVDSAQFPLTEEQ-KMEVEQDLKVLMDVCEAFRGGLDLLERQVREVFRKIMTCR 377
           +R ++DL+DS  F LT+E+  +EV++ ++ LM+VCEA + GLD  +R+VR+VF +I+  R
Sbjct: 340 SRMLSDLIDSDNFSLTDEKCTLEVKERVQELMNVCEAIKEGLDPFDRKVRDVFHQIVRTR 399

Query: 378 TEGLDYLG 385
           TE LD LG
Sbjct: 400 TEALDSLG 407


>AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corner'
           | chr1:23727927-23729174 FORWARD LENGTH=415
          Length = 415

 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 194/389 (49%), Gaps = 42/389 (10%)

Query: 31  VEASNESDSCNLELGSFQKRVADRFHDL----------------SGVSDDELLSIDWIQK 74
           V+ +NE +  +LEL  FQK +ADRF +L                S  + ++++S+ W++K
Sbjct: 23  VDVNNEQEQEDLEL--FQKHIADRFTELLSPPQPPPSDEINTVASVAATEQIMSVTWLRK 80

Query: 75  LLTAFICCQEEFRAILLNNKE--QVSKTPLDRMISEFFDRSVKALDICNASRDGIEKIRM 132
           L+  F+CC+ EF+AILL  ++  Q+SK P DR++ E  DRS+KALDIC A  +GI+ +R 
Sbjct: 81  LMDVFLCCEAEFKAILLMGRDPTQISKPPFDRLVPEMLDRSIKALDICTAVVNGIDSVRH 140

Query: 133 WQKHLEIVICAMGSNKRSLTEGQFXXXXXXXXXXXXXXXXXXXSGAVL-----------S 181
           +Q+  EI + A+   +R L +G                                     +
Sbjct: 141 YQRLAEIAVTAL--EQRPLGDGNVRRAKRALANLVVALSLEDKENVSGGGGGGGGGNKTT 198

Query: 182 QRHRSFGRHNSSKDXXXXXXXXXXXXXXXXXXX----XAAKQLQSIASNLVPPRATEIAA 237
           +R  SFGR +                            AAKQ+ ++ +NL PPR  E A 
Sbjct: 199 ERSWSFGRRSGGSSAASKGGATIGQLKSSSWAVGRNWSAAKQIHAMTANLTPPRGNEAAG 258

Query: 238 TSRLAITVYTMNCILLLVLWTLVAAIPCQDR-GLNIHFSVP-RQFSWSTPVTSLYDRIMD 295
              L   ++ M+ +++ V+W L AA+PCQ+R GL  H  VP +  +W+  +  ++++I D
Sbjct: 259 ---LPQPMFIMSTVMVFVMWVLTAAVPCQERSGLANHLPVPPKHLNWAQSLIGIHEKIGD 315

Query: 296 ESKKRERRNSNGLLKEIYQVELSTRHMTDLVDSAQFPLTEEQKMEVEQDLKVLMDVCEAF 355
           E KK+E++ S GL++E+ ++E     + +  D   +P  ++        +  + ++C   
Sbjct: 316 EWKKKEKKGSAGLMEEMTRMEKLGHSLMEFADGFHYPAEKDAAESAAVQVAEMAEICRRM 375

Query: 356 RGGLDLLERQVREVFRKIMTCRTEGLDYL 384
              L  L++Q+REVF +I+  R E L+ L
Sbjct: 376 EEELVPLQQQIREVFHRIVRSRAEILEVL 404


>AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:12279171-12280361 FORWARD LENGTH=396
          Length = 396

 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 201/384 (52%), Gaps = 32/384 (8%)

Query: 23  VRQEQVHSVEASNESDSCNLELGSFQKRVADRFHDL--------------SGVSDDELLS 68
           +R+ Q+ S++ ++E +   LE   FQK VA+RF DL                   D +LS
Sbjct: 17  IRRNQIVSMDVNHEQELEELEY--FQKHVAERFSDLITSPSPPPSSSSSAVSQPSDPILS 74

Query: 69  IDWIQKLLTAFICCQEEFRAILLNNKEQVSKTP-LDRMISEFFDRSVKALDICNASRDGI 127
           I W+Q LL  F+ C+ EF+A+L  +  Q+SK+P L+R++ E  DR +KALD+CNA  +GI
Sbjct: 75  IPWLQNLLDVFMSCEAEFKAVL--STTQISKSPSLERVLPEMLDRILKALDLCNAVVNGI 132

Query: 128 EKIRMWQKHLEIVICAMGSNKRSLTEGQFXXXXXXXXXXXXXXXX-----XXXSGAVLSQ 182
           + +R  ++  EI + A+   +R L +G                           G+  S 
Sbjct: 133 DSVRQSRRFAEIAVTAL--KQRPLCDGSVRRAKRALTSLLIGLNADERRDRNSGGSGCSN 190

Query: 183 RHRSFGRHNSSKDXXXXXXXXXXXXXXXXXXXXAAKQLQSIASNLVPPRATEIAATSRLA 242
           + R+  R + S                      A+KQ+Q++ +NLV PR  E +     A
Sbjct: 191 QRRTTSR-SWSFGTRSNVTGGGLYGQVVSKNWSASKQIQAMVANLVLPRGAEASGP---A 246

Query: 243 ITVYTMNCILLLVLWTLVAAIPCQDRGLNIH-FSVPRQFSWSTPVTSLYDRIMDESKKRE 301
           + VY M+ +++LV+W LVAA+PCQ   + +    +P+  +W++   S+ +RI +E K++E
Sbjct: 247 MPVYIMSSVMVLVMWVLVAAVPCQTSSVLVAPLPLPKHQNWASAAMSIQERIGEEIKRKE 306

Query: 302 RR-NSNGLLKEIYQVELSTRHMTDLVDSAQFPLTEEQKMEVEQDLKVLMDVCEAFRGGLD 360
           +R    GL++E+ ++E     + +  +  +FP  EE+++EV + +  + ++C     GL+
Sbjct: 307 KRCGGGGLMEEMQRMEKIGLSLMEFAERFRFPADEEEEVEVAEKVDEMEEICRRMEVGLE 366

Query: 361 LLERQVREVFRKIMTCRTEGLDYL 384
            L+RQVR+VF +++  R E +  L
Sbjct: 367 DLQRQVRQVFHRLVRSRIEIVSLL 390


>AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:6872345-6873460 REVERSE LENGTH=371
          Length = 371

 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 100/170 (58%), Gaps = 13/170 (7%)

Query: 216 AAKQLQSIASNLVPPRATEIAATSRLAITVYTMNCILLLVLWTLVAAIPCQ-DRGLNIHF 274
           AAKQ+Q++ +NLV PR  E       A  +Y M+ ++++V+WTLV A+PCQ   GL +H 
Sbjct: 212 AAKQIQAMTANLVAPRGGE-------ASPMYIMSSVMVMVMWTLVVAVPCQTSNGLMVHV 264

Query: 275 SVPRQFSWSTPVTSLYDRIMDESKKRERRNSNGLLKEIYQVELSTRHMTDLVDSAQFPLT 334
            +P+   W+    S+ +R+ +E K++E R   GL++E+ ++E     + +  +  +F   
Sbjct: 265 PLPKNQVWANAAVSISERVGEEMKRKETRG-GGLMEEMQRMERIGLKLMEFSEGFRFNGE 323

Query: 335 EEQKMEVEQDLKVLMDVCEAFRGGLDLLERQVREVFRKIMTCRTEGLDYL 384
           E+   EV +    + ++C     GL+ L+R+VREVF +++  R+E L+ +
Sbjct: 324 EDVVAEVAE----MEEICRKMEDGLEGLQRRVREVFHRLVKSRSEILEVI 369



 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 6/125 (4%)

Query: 24  RQEQVHSVEASNESDSCNLELGSFQKRVADRFHDLSGVSDDE----LLSIDWIQKLLTAF 79
           R+ QV S+E ++E +   LE   FQK VA+RF +L   SD      +LSI W++KLL  F
Sbjct: 17  RRNQVVSMEVNHEQEQEELE--DFQKHVAERFAELLPPSDSPESYPILSIQWLRKLLDVF 74

Query: 80  ICCQEEFRAILLNNKEQVSKTPLDRMISEFFDRSVKALDICNASRDGIEKIRMWQKHLEI 139
           +  + EF ++L +N  Q+SK PLD+++ E  DR VKALDIC A  +G++ +R  Q+  EI
Sbjct: 75  MSIESEFHSVLTSNPSQISKPPLDKLVPEMLDRIVKALDICTAVVNGVDSVRQIQRCAEI 134

Query: 140 VICAM 144
            + A+
Sbjct: 135 AVTAL 139