Miyakogusa Predicted Gene

Lj4g3v0321580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0321580.1 Non Chatacterized Hit- tr|G8A1D6|G8A1D6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,67.15,0,seg,NULL; DUF640,Domain of unknown function DUF640;
FAMILY NOT NAMED,NULL,CUFF.46832.1
         (174 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF64...   150   3e-37
AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF64...   147   3e-36
AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF64...   146   8e-36
AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF64...   144   3e-35
AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF64...   144   3e-35
AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF64...   144   3e-35
AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF64...   142   9e-35
AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF6...   138   2e-33
AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF6...   138   2e-33
AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF64...   120   5e-28
AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF64...   119   1e-27

>AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF640)
           | chr1:2174202-2174792 REVERSE LENGTH=196
          Length = 196

 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 83/123 (67%), Gaps = 2/123 (1%)

Query: 42  SPVALPRFSRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHT 101
           SP A P  SRY+S KR DW TF QYL NH P L LSRC G   ++FL+YLD+FG+TK+H 
Sbjct: 24  SPPATP--SRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHV 81

Query: 102 ENCEYFGDXXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLRE 161
             C YFG           LKQ+W  LD ++GRLR A+EENGG P+ NPF   AVR+YLRE
Sbjct: 82  AACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLRE 141

Query: 162 VRD 164
           VR+
Sbjct: 142 VRE 144


>AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF640)
           | chr3:8326958-8328010 FORWARD LENGTH=195
          Length = 195

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 82/117 (70%)

Query: 48  RFSRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYF 107
           + SRY++ KR DW TF QYL NH P L+LSRC G   L+FLRYLD+FG+TK+HT  C +F
Sbjct: 45  QLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFF 104

Query: 108 GDXXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
           G           L+Q+W  LD ++GRLR AFEENGG PE NPF   AVR+YLREVRD
Sbjct: 105 GHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRD 161


>AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF640)
           | chr2:13277903-13278562 FORWARD LENGTH=219
          Length = 219

 Score =  146 bits (368), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 80/114 (70%)

Query: 51  RYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGDX 110
           RY++ KR DW TF QYL NH P L+LSRC G   L+FLRYLD+FG+TK+HT  C ++G  
Sbjct: 54  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHP 113

Query: 111 XXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
                    L+Q+W  LD ++GRLR AFEENGG PE NPF   AVR+YLREVRD
Sbjct: 114 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRD 167


>AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF640)
           | chr1:29632054-29632641 REVERSE LENGTH=195
          Length = 195

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 79/116 (68%)

Query: 49  FSRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFG 108
            SRY+S KR DW TF QYL N  P + +S+CG    LDFL+YLD+FG+TK+H   C +FG
Sbjct: 38  LSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFG 97

Query: 109 DXXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
                      LKQ+W  LD ++GRLR AFEENGGLPE NPF G  +RV+LREVRD
Sbjct: 98  QVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRD 153


>AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF640)
           | chr5:10454541-10455113 REVERSE LENGTH=190
          Length = 190

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 86/130 (66%), Gaps = 3/130 (2%)

Query: 35  PPRMLQVSPVALPRFSRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRF 94
           P    Q++P   P  SRY++ KR DW TF QYL NH P L+L  C G   L+FLRYLD+F
Sbjct: 12  PNSSTQLTP---PSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQF 68

Query: 95  GETKIHTENCEYFGDXXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNA 154
           G+TK+H +NC +FG           L+Q+W  LD ++GRLR A+EENGG PE NPF   A
Sbjct: 69  GKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRA 128

Query: 155 VRVYLREVRD 164
           VR++LREVRD
Sbjct: 129 VRLFLREVRD 138


>AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF640)
           | chr3:1215812-1216417 REVERSE LENGTH=201
          Length = 201

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 63/114 (55%), Positives = 81/114 (71%)

Query: 51  RYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGDX 110
           RY++ KR DW TF QYL NHHP L+L+ C G   LDFLRYLD+FG+TK+H +NC +FG  
Sbjct: 33  RYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLP 92

Query: 111 XXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
                    L+Q+W  LD ++GRLR A+EENGG PE +PF   +VR++LREVRD
Sbjct: 93  NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRD 146


>AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF640)
           | chr5:23645535-23646083 REVERSE LENGTH=182
          Length = 182

 Score =  142 bits (359), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 78/115 (67%), Gaps = 1/115 (0%)

Query: 50  SRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGD 109
           SRY+S KR DW TF QYL NH P L LSRC G   L+FL+YLD+FG+TK+H   C +FG 
Sbjct: 18  SRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQ 77

Query: 110 XXXXXXXXXXLKQSWDGLDGIVGRLRVAFEE-NGGLPEMNPFRGNAVRVYLREVR 163
                     LKQ+W  LD ++GRLR AFEE  GGLPE NPF   AVR+YL+EVR
Sbjct: 78  PNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVR 132


>AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 76/115 (66%)

Query: 50  SRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGD 109
           SRY+S KR DW TF QYL N  P + +S C     LDFLRYLD+FG+TK+H   C ++G 
Sbjct: 24  SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQ 83

Query: 110 XXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
                     L+Q+W  LD ++GRLR A+EENGG PE NPF   A+RVYLREVR+
Sbjct: 84  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRE 138


>AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 76/115 (66%)

Query: 50  SRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGD 109
           SRY+S KR DW TF QYL N  P + +S C     LDFLRYLD+FG+TK+H   C ++G 
Sbjct: 24  SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQ 83

Query: 110 XXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVRD 164
                     L+Q+W  LD ++GRLR A+EENGG PE NPF   A+RVYLREVR+
Sbjct: 84  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRE 138


>AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF640)
           | chr4:10250794-10251369 FORWARD LENGTH=191
          Length = 191

 Score =  120 bits (301), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 1/116 (0%)

Query: 50  SRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEYFGD 109
           SRY+S KR DW TF QYL + +P L +S+      L FLRYLD+FG+TK+H + C +FG 
Sbjct: 36  SRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQ 95

Query: 110 XXXXXXXXXXLKQSWDGLDGIVGRLRVAFEEN-GGLPEMNPFRGNAVRVYLREVRD 164
                     LKQ+W  LD ++GRLR A+EE+ GG P+ NPF   ++RV+LREVR+
Sbjct: 96  PDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRE 151


>AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF640)
           | chr1:5785373-5785867 FORWARD LENGTH=164
          Length = 164

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 71/117 (60%)

Query: 47  PRFSRYDSLKRHDWTTFRQYLTNHHPSLTLSRCGGEIALDFLRYLDRFGETKIHTENCEY 106
           P  SRY+S K  DW TF QYL    P + +  C     LDFL+  D+FG+TK+H + C +
Sbjct: 19  PTLSRYESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVF 78

Query: 107 FGDXXXXXXXXXXLKQSWDGLDGIVGRLRVAFEENGGLPEMNPFRGNAVRVYLREVR 163
           FG           LKQ+W  LD ++GRLR A+EENGGL E NPF    +R++LREVR
Sbjct: 79  FGQKEPPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVR 135