Miyakogusa Predicted Gene
- Lj4g3v0288380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0288380.1 Non Chatacterized Hit- tr|I1K2X3|I1K2X3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.59,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,NODE_84319_length_1834_cov_7.561614.path1.1
(526 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 818 0.0
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 447 e-125
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 445 e-125
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 444 e-124
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 441 e-124
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 439 e-123
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-123
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 426 e-119
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-119
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 421 e-118
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 419 e-117
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-117
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 413 e-115
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 412 e-115
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 410 e-114
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 409 e-114
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 408 e-114
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 403 e-112
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 403 e-112
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 396 e-110
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 389 e-108
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 387 e-107
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 387 e-107
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 387 e-107
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 382 e-106
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 381 e-106
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-103
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 348 4e-96
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 3e-93
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 331 9e-91
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 2e-89
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 1e-88
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 9e-86
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 312 4e-85
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 311 8e-85
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 9e-80
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 288 5e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 8e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 2e-77
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 286 3e-77
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 280 2e-75
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 5e-75
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 278 1e-74
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 3e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 3e-72
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 6e-72
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 4e-71
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 7e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 257 1e-68
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 256 2e-68
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 1e-66
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 1e-65
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 247 2e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 8e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 9e-64
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 240 2e-63
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 238 7e-63
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 7e-61
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 229 5e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 205 7e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 9e-53
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 4e-43
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 7e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 3e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 106 3e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 9e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 4e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 9e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 89 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 88 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 86 5e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 85 2e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 5e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 79 6e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 78 2e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 74 3e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 7e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 63 5e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 61 2e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 57 4e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 6e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 8e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 4e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 5e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 8e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/526 (71%), Positives = 452/526 (85%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVKFNLL +A +FD+MP+RNV+SWTTMISAYS K++ +A++LLV MLR+ V PN++T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+SSVLR+C +SD++ +H I+K GLESDVFVRSALIDV++KLGE +ALSVF EMVTGD
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGD 224
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
+VWNSII FAQ+S D AL L+K+M+RAGF A+Q+TLTSVLRACTG++LLELG QAHV
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 181 HVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
H++K+DQDLIL+NAL+DMYCKCGSLEDA +FN+M +DVI+WSTMI+GLAQNG+S EAL
Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
KLF+ MK G +PNYITI+GVLFACSHAGL++DGW+YFRSMK LYGIDP REHYGCM+DL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY 360
LG+AGKLDD VKL++EM C+PD VTWRTLL ACR RN+ LA YAAK+++ LD ED G Y
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 464
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEIS 420
LLSN YANS+ W+ V E+R MR +GI+KEPGCSWIEV+KQIHAFI+GD SHPQI E+S
Sbjct: 465 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVS 524
Query: 421 RQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVW 480
++LNQ I RLTG GYVP+TNFVLQDLEGEQ EDSLRHHSEKLA+ FG+M+ P EK IR+
Sbjct: 525 KKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIR 584
Query: 481 KNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KNLRICGDCH+F KL +KLE R IVIRDPIRYHHF+DG CSCGDYW
Sbjct: 585 KNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 157/300 (52%), Gaps = 18/300 (6%)
Query: 41 RAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKV------GLESDVFVRS 94
RAMK + + G+ + T+S +++ C +S+ + +H L G +F+ +
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCC--ISN-RAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 95 ALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPA 154
LI++Y K L +A +F +M + + W ++I+A+++ +AL L M R
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIF 212
+ T +SVLR+C GMS + R H ++K + D+ + +AL+D++ K G EDA +F
Sbjct: 161 NVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
+ MV D I W+++I G AQN S AL+LF MK G T+ VL AC+ L++
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G ++ ++ D ++D+ + G L+D +++ ++M + DV+TW T++
Sbjct: 278 LG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISG 333
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 103 LGELLEALSVFKEMVT-------GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPAD 155
+ ++ + +F+ +VT D+ + S D A+ ++ G AD
Sbjct: 1 MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60
Query: 156 QSTLTSVLRACTGMSLLELGRQA--HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFN 213
+T + +++ C + G H++ + L N L++MY K L DA +F+
Sbjct: 61 SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS------- 266
+M ++VISW+TMI+ ++ +AL+L M RPN T VL +C+
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180
Query: 267 -HAGLVDDGWH---YFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
H G++ +G + RS ++D+ + G+ +D + + EM D
Sbjct: 181 LHCGIIKEGLESDVFVRS---------------ALIDVFAKLGEPEDALSVFDEM-VTGD 224
Query: 323 VVTWRTLLDACRAHRNVDLA 342
+ W +++ + D+A
Sbjct: 225 AIVWNSIIGGFAQNSRSDVA 244
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/531 (42%), Positives = 343/531 (64%), Gaps = 22/531 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF---MLREGVMPN 57
MY K LEEA+ VF++MP+R+ V+WTT+IS YS +DR L+F MLR G PN
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ---HDRPCDALLFFNQMLRFGYSPN 160
Query: 58 MFTFSSVLRA--------CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEA 109
FT SSV++A C + Q+H +K G +S+V V SAL+D+Y++ G + +A
Sbjct: 161 EFTLSSVIKAAAAERRGCCGH-----QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 110 LSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
VF + + + V WN++IA A+ S ++AL L++ M R GF + S+ AC+
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 170 SLLELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMI 227
LE G+ H +++K + L+ N LLDMY K GS+ DA+ IF+R+ +DV+SW++++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
AQ+GF EA+ F+ M+ +G RPN I+ L VL ACSH+GL+D+GWHY+ MK GI
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGI 394
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAK 347
P HY ++DLLGRAG L+ ++ I EM +P W+ LL+ACR H+N +L YAA+
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 348 EILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFI 407
+ +LD +D G +V+L N YA+ WND A VR+ M+ G++KEP CSW+E++ IH F+
Sbjct: 455 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFV 514
Query: 408 LGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFG 467
D+ HPQ +EI+R+ + ++++ GYVPDT+ V+ ++ ++RE +L++HSEK+A+ F
Sbjct: 515 ANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFA 574
Query: 468 IMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDG 518
+++ P TI + KN+R+CGDCH KL +K+ R I++RD R+HHF+D
Sbjct: 575 LLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 15/285 (5%)
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++++L+ C + Q +H+ IL+ D+ + + L+++Y+K G L EA VF++M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W ++I+ ++QH +AL + +M R G+ ++ TL+SV++A G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K FD ++ + +ALLD+Y + G ++DA+ +F+ + ++ +SW+ +IAG A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ +AL+LF M G RP++ + + ACS G ++ G + Y I G +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-----KWVHAYMIKSGEKLVA 297
Query: 296 ----CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+LD+ ++G + D K+ + K DVV+W +LL A H
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQH 341
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 153 PADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKF 210
PAD+ ++L+ CT LL GR H H+L+ F D+++ N LL+MY KCGSLE+A+
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
+F +M +D ++W+T+I+G +Q+ +AL F+ M G PN T+ V+ A +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G H G D +LDL R G +DD + + + D V+W L+
Sbjct: 177 GCCG-HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALI 234
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/524 (41%), Positives = 341/524 (65%), Gaps = 5/524 (0%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
++ + VF+ MP ++VVS+ T+I+ Y+ + + A++++ M + P+ FT SSVL
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 68 -CEYLSDIK--QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
EY+ IK +IH +++ G++SDV++ S+L+D+Y+K + ++ VF + D + W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
NS++A + Q+ +EAL L+++M A +SV+ AC ++ L LG+Q H +VL+
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
F ++ + +AL+DMY KCG+++ A+ IF+RM V D +SW+ +I G A +G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
F+ MK G +PN + + VL ACSH GLVD+ W YF SM +YG++ EHY + DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVL 362
RAGKL++ I +M +P W TLL +C H+N++LA A++I +D+E+ GAYVL
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
+ N YA++ W ++A++R MR KG+RK+P CSWIE+ + H F+ GD+SHP +D+I+
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L + ++ GYV DT+ VL D++ E + + L HSE+LA+ FGI++ TIRV KN
Sbjct: 612 LKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKN 671
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+RIC DCH+ K I+K+ +R I++RD R+HHF G CSCGDYW
Sbjct: 672 IRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 130/235 (55%), Gaps = 7/235 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E+++ VF + R+ +SW ++++ Y + A++L M+ V P
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FSSV+ AC +L+ + KQ+H +L+ G S++F+ SAL+D+YSK G + A +F M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG-- 175
D V W +II A H G EA+ L+++M+R G +Q +VL AC+ + L++
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 176 -RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIA 228
+ V +Q+L + A+ D+ + G LE+A ++M V+ S WST+++
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 176/364 (48%), Gaps = 57/364 (15%)
Query: 15 FDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI 74
F + V++W ++I ++ L +A+ V M G P+ F SVL++C + D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 75 K---QIHSSILKVGLESDVFVRSALIDVYSKL---GELLEALSVFKEMV-----TGDR-- 121
+ +H I+++G++ D++ +AL+++Y+KL G + +VF EM +GD
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 122 --------------------------VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPAD 155
V +N+IIA +AQ ++AL + ++M D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFN 213
TL+SVL + + G++ H +V++ D D+ + ++L+DMY K +ED++ +F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDD 273
R+ +D ISW++++AG QNG EAL+LF M +P + V+ AC+H +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 274 GWHYFRSMKNLYGIDPGREHYG-------CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
G K L+G R +G ++D+ + G + K+ MN D V+W
Sbjct: 362 G-------KQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSW 412
Query: 327 RTLL 330
++
Sbjct: 413 TAII 416
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 72 SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAF 131
S KQ+H+ ++ S S +I +Y+ L L EAL +FK + + + W S+I F
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 132 AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDL 189
S +AL + +MR +G D + SVL++CT M L G H +++ D DL
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 190 ILHNALLDMYCKC---GS---------------------------------LEDAKFIFN 213
NAL++MY K GS ++ + +F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDD 273
M KDV+S++T+IAG AQ+G +AL++ M +P+ T+ VL S V
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 274 G--WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G H + K GID ++D+ ++ +++D ++ + C+ D ++W +L+
Sbjct: 261 GKEIHGYVIRK---GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLV 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ A+ +FD M + VSWT +I ++ A+ L M R+GV PN
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 61 FSSVLRACEYLSDIKQI---HSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +VL AC ++ + + +S+ KV GL ++ +A+ D+ + G+L EA + +M
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT 167
V VW++++++ + H + L L +K+ F D + + + C
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKN----LELAEKVAEKIFTVDSENMGAYVLMCN 554
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/524 (42%), Positives = 335/524 (63%), Gaps = 8/524 (1%)
Query: 11 AQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFTFSSVLRAC 68
A VF ++ + NV W T+I Y+ + + A L M G V P+ T+ +++A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 69 EYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
++D++ IHS +++ G S ++V+++L+ +Y+ G++ A VF +M D V WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF 185
S+I FA++ +EAL LY +M G D T+ S+L AC + L LG++ HV+++K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 186 DQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
LH N LLD+Y +CG +E+AK +F+ MV K+ +SW+++I GLA NGF EA++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 244 DSMK-VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
M+ G P IT +G+L+ACSH G+V +G+ YFR M+ Y I+P EH+GCM+DLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVL 362
RAG++ + I M +P+VV WRTLL AC H + DLA +A +IL+L+ +G YVL
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
LSN YA+ + W+DV ++R+ M G++K PG S +EV ++H F++GDKSHPQ D I +
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L + RL GYVP + V D+E E++E+++ +HSEK+AI F ++S P+ I V KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LR+C DCH+ KL++K+ R IV+RD R+HHF++G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + A VFD+MPE+++V+W ++I+ ++ + A+ L M +G+ P+ FT
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+L AC + + K++H ++KVGL ++ + L+D+Y++ G + EA ++F EMV
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELGR 176
+ V W S+I A + G EA+ L+K M G + T +L AC+ +++ G
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 177 QAHVHV---LKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQ 232
+ + K + + ++D+ + G ++ A ++I + + +V+ W T++
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 233 NGFSLEALKLFDSMKVMGPRPNY 255
+G S L F ++++ PN+
Sbjct: 405 HGDS--DLAEFARIQILQLEPNH 425
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/531 (40%), Positives = 321/531 (60%), Gaps = 5/531 (0%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L+ A + ++VVSWTTMI+ Y+ +D+A+ ML G+ +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++ + AC L +K QIH+ G SD+ ++AL+ +YS+ G++ E+ F++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
GD + WN++++ F Q + +EAL ++ +M R G + T S ++A + + ++ G+Q
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + K +D + + NAL+ MY KCGS+ DA+ F + K+ +SW+ +I +++GF
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL FD M RPN++T++GVL ACSH GLVD G YF SM + YG+ P EHY
Sbjct: 774 GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++D+L RAG L + I EM KPD + WRTLL AC H+N+++ +AA +L+L+ E
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D+ YVLLSN YA SK W+ R+ M+ KG++KEPG SWIEV IH+F +GD++HP
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
DEI R + GYV D +L +L+ EQ++ + HSEKLAI FG++S P
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I V KNLR+C DCH + K ++K+ R I++RD R+HHF G CSC DYW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 173/341 (50%), Gaps = 7/341 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K +E A F E NVV W M+ AY + + ++ M E ++PN +T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ S+L+ C L D++ QIHS I+K + + +V S LID+Y+KLG+L A +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W ++IA + Q++ D+AL +++M G +D+ LT+ + AC G+ L+ G+Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 178 AHVH--VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V F DL NAL+ +Y +CG +E++ F + D I+W+ +++G Q+G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ EAL++F M G N T + A S + G ++ G D E
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCN 731
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++ + + G + D K E++ K + V+W +++A H
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKH 771
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 163/325 (50%), Gaps = 8/325 (2%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE---- 69
VFDEMPER + +W MI +S L L V M+ E V PN TFS VL AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 70 YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIA 129
++QIH+ IL GL V + LID+YS+ G + A VF + D W ++I+
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 130 AFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQ 187
+++ EA+ L+ M G +SVL AC + LE+G Q H VLK F
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
D + NAL+ +Y G+L A+ IF+ M +D ++++T+I GL+Q G+ +A++LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
+ G P+ T+ ++ ACS G + G L G + G +L+L + +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADI 440
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDA 332
+ + E + +VV W +L A
Sbjct: 441 ETALDYFLETEVE-NVVLWNVMLVA 464
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 181/358 (50%), Gaps = 13/358 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + ++ A+ VFD + ++ SW MIS S + A++L M G+MP +
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FSSVL AC+ + ++ Q+H +LK+G SD +V +AL+ +Y LG L+ A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V +N++I +Q G++A+ L+K+M G D +TL S++ AC+ L G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + K F + + ALL++Y KC +E A F V++V+ W+ M+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHY 294
+ ++F M++ PN T +L C G ++ G + + +K + ++ Y
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----Y 526
Query: 295 GC--MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
C ++D+ + GKLD ++ K DVV+W T++ + D A +++L
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 185/454 (40%), Gaps = 84/454 (18%)
Query: 53 GVMPNMFTFSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLE 108
G+ PN T +L C L + +++HS ILK+GL+S+ + L D Y G+L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 109 ALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTG 168
A VF EM WN +I A + E L+ +M ++ T + VL AC G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 169 MSL-LELGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWST 225
S+ ++ Q H +L ++ N L+D+Y + G ++ A+ +F+ + +KD SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS------------------- 266
MI+GL++N EA++LF M V+G P VL AC
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 267 ----------------HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG---KL 307
H G + H F +M + Y +++ L + G K
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGEKA 373
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDACRA----HRNVDLATYAAK-----------EILKL 352
++ K +H +PD T +L+ AC A R L Y K +L L
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 353 DAE----DTGAYVLLSNTYANSKMWN-------------DVAEVRRTMRVKGI--RKEPG 393
A+ +T L N +WN + + R M+++ I +
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 394 CSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFI 427
S ++ ++ LG++ H QI + + QLN ++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/533 (41%), Positives = 343/533 (64%), Gaps = 8/533 (1%)
Query: 1 MYVKFNLLEEAQVVFD--EMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
+Y K L A+ VF+ +PER +VSWT ++SAY+ A+++ M + V P+
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 59 FTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
SVL A L D+KQ IH+S++K+GLE + + +L +Y+K G++ A +F +
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M + + ++WN++I+ +A++ EA+ ++ +M D ++TS + AC + LE
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 176 RQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
R + +V + D D+ + +AL+DM+ KCGS+E A+ +F+R + +DV+ WS MI G +
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G + EA+ L+ +M+ G PN +T LG+L AC+H+G+V +GW +F M + + I+P ++H
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQH 461
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y C++DLLGRAG LD ++I M +P V W LL AC+ HR+V+L YAA+++ +D
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
+TG YV LSN YA +++W+ VAEVR M+ KG+ K+ GCSW+EV ++ AF +GDKSH
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Query: 414 PQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPK 473
P+ +EI RQ+ SRL G+V + + L DL E+ E++L HSE++AI +G++S P+
Sbjct: 582 PRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQ 641
Query: 474 EKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+R+ KNLR C +CH KLI+KL R IV+RD R+HHF+DGVCSCGDYW
Sbjct: 642 GTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 180/338 (53%), Gaps = 19/338 (5%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
F + A+ VFD++P + W +I YS A+ + M V P+ FTF +
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 65 LRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
L+AC LS ++ +H+ + ++G ++DVFV++ LI +Y+K L A +VF+ + +R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 122 VV--WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ W +I++A+AQ+ + EAL ++ +MR+ D L SVL A T + L+ GR H
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 180 VHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
V+K + DL++ +L MY KCG + AK +F++M ++I W+ MI+G A+NG+
Sbjct: 246 ASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY- 294
+ EA+ +F M RP+ I+I + AC+ G ++ RSM G R+
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGRSDYRDDVF 359
Query: 295 --GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + G ++ +L+ + DVV W ++
Sbjct: 360 ISSALIDMFAKCGSVEG-ARLVFDRTLDRDVVVWSAMI 396
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 159/318 (50%), Gaps = 38/318 (11%)
Query: 53 GVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
G+ + F ++S++ + + + +KQIH+ +L +GL+ F+ + LI S G++ A V
Sbjct: 17 GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F ++ WN+II +++++ +AL +Y M+ A D T +L+AC+G+S L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 173 ELGRQAHVHV--LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV--KDVISWSTMIA 228
++GR H V L FD D+ + N L+ +Y KC L A+ +F + + + ++SW+ +++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 229 GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL--FAC---------SHAGLVDDGWH- 276
AQNG +EAL++F M+ M +P+++ ++ VL F C HA +V G
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 277 ---YFRSMKNLYG---------------IDPGREHYGCMLDLLGRAGKLDDMVKLIHEM- 317
S+ +Y P + M+ + G + + + HEM
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 318 --NCKPDVVTWRTLLDAC 333
+ +PD ++ + + AC
Sbjct: 316 NKDVRPDTISITSAISAC 333
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/543 (42%), Positives = 340/543 (62%), Gaps = 20/543 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN--- 57
MY LE+A+ VFDE+P+RN+VSWT+MI Y LN A+ + V N
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD---LNGNALDAVSLFKDLLVDENDDD 176
Query: 58 --MFTFS----SVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGE--L 106
MF S SV+ AC + + IHS ++K G + V V + L+D Y+K GE +
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 107 LEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRA 165
A +F ++V DRV +NSI++ +AQ +EA +++++ + + TL++VL A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 166 CTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISW 223
+ L +G+ H V++ + D+I+ +++DMYCKCG +E A+ F+RM K+V SW
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 224 STMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN 283
+ MIAG +G + +AL+LF +M G RPNYIT + VL ACSHAGL +GW +F +MK
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLAT 343
+G++PG EHYGCM+DLLGRAG L LI M KPD + W +LL ACR H+NV+LA
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAE 476
Query: 344 YAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQI 403
+ + +LD+ + G Y+LLS+ YA++ W DV VR M+ +G+ K PG S +E++ ++
Sbjct: 477 ISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEV 536
Query: 404 HAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLA 463
H F++GD+ HPQ ++I L + +L AGYV +T+ V D++ E++E +LR HSEKLA
Sbjct: 537 HVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLA 596
Query: 464 IVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCG 523
I FGIM+ T+ V KNLR+C DCH KLI+K+ R V+RD R+HHF+DG CSCG
Sbjct: 597 IAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCG 656
Query: 524 DYW 526
DYW
Sbjct: 657 DYW 659
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 18/269 (6%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNMFTFSSVLRACEYLSDI---KQ 76
+V SW ++I+ + + D A LL F M + + P +F ++AC L DI KQ
Sbjct: 40 DVFSWNSVIADLA--RSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
H G +SD+FV SALI +YS G+L +A VF E+ + V W S+I + + +
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 137 GDEALYLYKKM------RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQD 188
+A+ L+K + D L SV+ AC+ + L H V+K FD+
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 189 LILHNALLDMYCKC--GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
+ + N LLD Y K G + A+ IF+++V KD +S++++++ AQ+G S EA ++F +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 247 -KVMGPRPNYITILGVLFACSHAGLVDDG 274
K N IT+ VL A SH+G + G
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIG 306
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/532 (40%), Positives = 331/532 (62%), Gaps = 6/532 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L+ A+ VF EM +R+VVS+T+MI+ Y+ L A+KL M EG+ P+++T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++VL C L + K++H I + L D+FV +AL+D+Y+K G + EA VF EM
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + WN+II ++++ +EAL L+ + F D+ T+ VL AC +S + GR
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H ++++ + D + N+L+DMY KCG+L A +F+ + KD++SW+ MIAG +G
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
F EA+ LF+ M+ G + I+ + +L+ACSH+GLVD+GW +F M++ I+P EHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++D+L R G L + I M PD W LL CR H +V LA A+++ +L+
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
E+TG YVL++N YA ++ W V +R+ + +G+RK PGCSWIE+ +++ F+ GD S+P
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
+ + I L + +R+ GY P T + L D E ++E++L HSEKLA+ GI+S
Sbjct: 760 ETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
K IRV KNLR+CGDCH AK ++KL +R IV+RD R+H F+DG CSC +W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 171/336 (50%), Gaps = 9/336 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY L+EA VFDE+ + W +++ + ++ L M+ GV + +T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FS V ++ L + +Q+H ILK G V ++L+ Y K + A VF EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + WNSII + + ++ L ++ +M +G D +T+ SV C L+ LGR
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K F ++ N LLDMY KCG L+ AK +F M + V+S+++MIAG A+ G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK-NLYGIDPGREHY 294
+ EA+KLF+ M+ G P+ T+ VL C+ L+D+G +K N G D +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN- 436
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + G + + + EM K D+++W T++
Sbjct: 437 -ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 178/411 (43%), Gaps = 47/411 (11%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQ 76
+R+V T + + + A+KLL + + P T SVL+ C + L D K+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
+ + I G D + S L +Y+ G+L EA VF E+ + WN ++ A+ D
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 137 GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNA 194
++ L+KKM +G D T + V ++ + + + G Q H +LK F + + N+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 195 LLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPN 254
L+ Y K ++ A+ +F+ M +DVISW+++I G NG + + L +F M V G +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 255 YITILGVLFACSHAGLVDDGW---------------HYFRSMKNLYG----IDPGRE--- 292
TI+ V C+ + L+ G + ++ ++Y +D +
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 293 --------HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDL 341
Y M+ R G + VKL EM PDV T +L+ C +R +D
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 342 ATYAAKEILKLDAEDTGAYVLLSNT----YANSKMWNDVAEVRRTMRVKGI 388
+ I + D G + +SN YA + V MRVK I
Sbjct: 416 GKRVHEWIKE---NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/532 (41%), Positives = 335/532 (62%), Gaps = 7/532 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + LE+A+ V DEMPE+NVVSWT MIS YS + A+ + M+R PN FTF
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++VL +C S + KQIH I+K +S +FV S+L+D+Y+K G++ EA +F+ +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V +IIA +AQ +EAL ++ ++ G + T S+L A +G++LL+ G+QA
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 179 HVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H HVL+ + +L N+L+DMY KCG+L A+ +F+ M + ISW+ M+ G +++G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 237 LEALKLFDSMK-VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM-KNLYGIDPGREHY 294
E L+LF M+ +P+ +T+L VL CSH + D G + F M YG PG EHY
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
GC++D+LGRAG++D+ + I M KP +LL ACR H +VD+ + +++++
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
E+ G YV+LSN YA++ W DV VR M K + KEPG SWI+ ++ +H F D++HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
+ +E+ ++ + ++ AGYVPD + VL D++ EQ+E L HSEKLA+ FG+++ +
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IRV+KNLRIC DCH FAK+ +K+ +R + +RD R+H DG+CSCGDYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 18/341 (5%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
FNL+ F P V+ IS S N R + L+ M G + ++
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCS---NGRLQEALLEMAMLGPEMGFHGYDAL 58
Query: 65 LRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
L AC L D +++H+ ++K ++R+ L+ Y K L +A V EM +
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V W ++I+ ++Q EAL ++ +M R+ ++ T +VL +C S L LG+Q H
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 182 VLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
++K +D + + ++LLDMY K G +++A+ IF + +DV+S + +IAG AQ G EA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG----WHYFRSMKNLYGIDPGREHYG 295
L++F + G PNY+T +L A S L+D G H R Y +
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-----LQN 293
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++D+ + G L +L M + ++W +L H
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKH 333
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 123/229 (53%), Gaps = 14/229 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++EA+ +F+ +PER+VVS T +I+ Y+ + L++ A+++ + EG+ PN T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++S+L A L+ + KQ H +L+ L ++++LID+YSK G L A +F M
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRAC-------TGM 169
+ WN+++ +++H G E L L++ MR D TL +VL C TG+
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 170 SLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK 218
++ + G A + K + + ++DM + G +++A RM K
Sbjct: 377 NIFD-GMVAGEYGTKPGTE--HYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 38/241 (15%)
Query: 161 SVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK 218
++L AC L G++ H H++K + L LL Y KC LEDA+ + + M K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG---- 274
+V+SW+ MI+ +Q G S EAL +F M +PN T VL +C A + G
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 275 -----WHY-------------------FRSMKNLYGIDPGREHYGCMLDLLGRA--GKLD 308
W+Y + + ++ P R+ C + G A G +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 309 DMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSN 365
+ +++ H ++ + P+ VT+ +LL A +D A +L+ + Y +L N
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR---RELPFYAVLQN 293
Query: 366 T 366
+
Sbjct: 294 S 294
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/532 (42%), Positives = 335/532 (62%), Gaps = 7/532 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y +E AQ +FDE+P ++VVSW MIS Y+ A++L M++ V P+ T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+V+ AC I +Q+H I G S++ + +ALID+YSK GEL A +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D + WN++I + + EAL L+++M R+G + T+ S+L AC + +++GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 179 HVHVLKFDQDLI----LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
HV++ K + + L +L+DMY KCG +E A +FN ++ K + SW+ MI G A +G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ + LF M+ +G +P+ IT +G+L ACSH+G++D G H FR+M Y + P EHY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
GCM+DLLG +G + ++I+ M +PD V W +LL AC+ H NV+L A+ ++K++
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
E+ G+YVLLSN YA++ WN+VA+ R + KG++K PGCS IE+D +H FI+GDK HP
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
+ EI L + L AG+VPDT+ VLQ++E E +E +LRHHSEKLAI FG++S
Sbjct: 630 RNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 689
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ + KNLR+C +CH KLI+K+ +R I+ RD R+HHFRDGVCSC DYW
Sbjct: 690 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 205/417 (49%), Gaps = 39/417 (9%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
F L A VF + E N++ W TM ++ A+KL V M+ G++PN +TF V
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 65 LRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK------- 114
L++C + + +QIH +LK+G + D++V ++LI +Y + G L +A VF
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 115 ------------------------EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA 150
E+ D V WN++I+ +A+ + EAL L+K M +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 151 GFPADQSTLTSVLRACTGMSLLELGRQAHVHV--LKFDQDLILHNALLDMYCKCGSLEDA 208
D+ST+ +V+ AC +ELGRQ H+ + F +L + NAL+D+Y KCG LE A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 209 KFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHA 268
+F R+ KDVISW+T+I G EAL LF M G PN +T+L +L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 269 GLVDDG-WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWR 327
G +D G W + K L G+ ++D+ + G ++ ++ + + K + +W
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWN 439
Query: 328 TLLDACRAHRNVDLATYAAKEILKLDAE-DTGAYVLLSNTYANSKMWNDVAEVRRTM 383
++ H D + + K+ + D +V L + ++S M + + RTM
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 38/304 (12%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALID---VYSKLGELLEALSVFKEMVTG 119
S+L C+ L ++ IH+ ++K+GL + + S LI+ + L A+SVFK +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ ++WN++ A SD AL LY M G + T VL++C + G+Q H
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 180 VHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNR----------------------- 214
HVLK D DL +H +L+ MY + G LEDA +F++
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 215 --------MVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+ VKDV+SW+ MI+G A+ G EAL+LF M RP+ T++ V+ AC+
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
+G ++ G + + +G + ++DL + G+L+ L + K DV++W
Sbjct: 278 QSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISW 335
Query: 327 RTLL 330
TL+
Sbjct: 336 NTLI 339
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 5/182 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K LE A +F+ +P ++V+SW T+I Y+ + L A+ L MLR G PN T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 61 FSSVLRACEYLSDI---KQIHSSILK--VGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
S+L AC +L I + IH I K G+ + +R++LID+Y+K G++ A VF
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
++ WN++I FA H D + L+ +MR+ G D T +L AC+ +L+LG
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 176 RQ 177
R
Sbjct: 490 RH 491
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/509 (42%), Positives = 322/509 (63%), Gaps = 5/509 (0%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSI 81
NVVSWT MIS + + A+ L M R+GV PN FT+S +L A +S ++H+ +
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-SEVHAQV 419
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
+K E V +AL+D Y KLG++ EA VF + D V W++++A +AQ + + A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSL-LELGRQAHVHVLK--FDQDLILHNALLDM 198
++ ++ + G ++ T +S+L C + + G+Q H +K D L + +ALL M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y K G++E A+ +F R KD++SW++MI+G AQ+G +++AL +F MK + + +T
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
+GV AC+HAGLV++G YF M I P +EH CM+DL RAG+L+ +K+I M
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAE 378
WRT+L ACR H+ +L AA++I+ + ED+ AYVLLSN YA S W + A+
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 379 VRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPD 438
VR+ M + ++KEPG SWIEV + ++F+ GD+SHP D+I +L +RL GY PD
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779
Query: 439 TNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAK 498
T++VLQD++ E +E L HSE+LAI FG+++ PK + + KNLR+CGDCH+ KLIAK
Sbjct: 780 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 839
Query: 499 LEQRHIVIRDPIRYHHF-RDGVCSCGDYW 526
+E+R IV+RD R+HHF DGVCSCGD+W
Sbjct: 840 IEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 30/344 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K + ++ + VFDEM ERNVV+WTT+IS Y+ +ND + L + M EG PN FTF
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 62 SSVLR--ACEYLSDIK-QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++ L A E + Q+H+ ++K GL+ + V ++LI++Y K G + +A +F +
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V WNS+I+ +A + EAL ++ MR +S+ SV++ C + L Q
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 179 HVHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRM-VVKDVISWSTMIAGLAQN 233
H V+K FDQ+ + AL+ Y KC ++ DA +F + V +V+SW+ MI+G QN
Sbjct: 318 HCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 234 GFSLEALKLFDSMKVMGPRPN---YITILGVLFACS----HAGLVDDGWHYFRSMKNLYG 286
EA+ LF MK G RPN Y IL L S HA +V + ++
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT--- 432
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+LD + GK+++ K+ ++ K D+V W +L
Sbjct: 433 ---------ALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAML 466
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 191/364 (52%), Gaps = 15/364 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+K + +A+++FD+ ++VV+W +MIS Y++ L+ A+ + M V + +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
F+SV++ C L +++ Q+H S++K G D +R+AL+ YSK +L+AL +FKE+
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
G+ V W ++I+ F Q+ +EA+ L+ +M+R G ++ T + +L A +S E+
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV-- 415
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H V+K +++ + ALLD Y K G +E+A +F+ + KD+++WS M+AG AQ G
Sbjct: 416 --HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ A+K+F + G +PN T +L C+ F +D
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH----RNVDLATYAAKEIL 350
+L + + G ++ ++ K D+V+W +++ H + +D+ K +
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 351 KLDA 354
K+D
Sbjct: 593 KMDG 596
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 169/341 (49%), Gaps = 28/341 (8%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L A +FD+ P R+ S+ +++ +S A +L + + R G+ + FSSVL+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 68 CEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
L D +Q+H +K G DV V ++L+D Y K + VF EM + V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
++I+ +A++S DE L L+ +M+ G + T + L + G Q H V+K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
D+ + + N+L+++Y KCG++ A+ +F++ VK V++W++MI+G A NG LEAL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 243 FDSMKVMGPRPNYITILGVLFACS-----------HAGLVDDGWHYFRSMKNLYGIDPGR 291
F SM++ R + + V+ C+ H +V G+ + ++++
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT-------- 334
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + + D ++L E+ C +VV+W ++
Sbjct: 335 ----ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E A+ VF E+++VSW +MIS Y+ +A+ + M + V + T
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLES-DVFVR-----------SALIDVYSKLGELLE 108
F V AC H+ +++ G + D+ VR S ++D+YS+ G+L +
Sbjct: 599 FIGVFAAC--------THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 109 ALSVFKEMVT-GDRVVWNSIIAAFAQH 134
A+ V + M +W +I+AA H
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVH 677
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/527 (42%), Positives = 320/527 (60%), Gaps = 38/527 (7%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ ++EEA+ +FD+MPERN VSW M++ Y + + A +L VMP
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF------DVMP----- 339
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
C +V + +I Y++ G++ EA ++F +M D
Sbjct: 340 ------CR-------------------NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V W ++IA ++Q EAL L+ +M R G ++S+ +S L C + LELG+Q H
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 182 VLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
++K ++ + NALL MYCKCGS+E+A +F M KD++SW+TMIAG +++GF A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L+ F+SMK G +P+ T++ VL ACSH GLVD G YF +M YG+ P +HY CM+D
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
LLGRAG L+D L+ M +PD W TLL A R H N +LA AA +I ++ E++G
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEI 419
YVLLSN YA+S W DV ++R MR KG++K PG SWIE+ + H F +GD+ HP+ DEI
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 420 SRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRV 479
L + R+ AGYV T+ VL D+E E++E +R+HSE+LA+ +GIM + IRV
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 480 WKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KNLR+C DCH K +A++ R I++RD R+HHF+DG CSCGDYW
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 56/331 (16%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ E A+ +FDEMPER++VSW MI Y + +A +L +MP
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE------IMP----- 153
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
E DV + ++ Y++ G + +A SVF M +
Sbjct: 154 -------------------------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V WN++++A+ Q+S +EA L+K + L ++ + + +V
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV- 247
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
+D++ N ++ Y + G +++A+ +F+ V+DV +W+ M++G QN EA +
Sbjct: 248 -----RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE--HYGCMLD 299
LFD M P N ++ +L AG V K L+ + P R + M+
Sbjct: 303 LFDKM----PERNEVSWNAML-----AGYVQG--ERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ GK+ + L +M K D V+W ++
Sbjct: 352 GYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 49/283 (17%)
Query: 60 TFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
F S+ RA + Q +LK G +SD+ + I Y + G EAL VFK M
Sbjct: 36 NFHSLKRATQTQIQKSQT-KPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW 93
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
V +N +I+ + ++ + + A L+ +M
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEMP------------------------------- 122
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
++DL+ N ++ Y + +L A+ +F M +DV SW+TM++G AQNG +A
Sbjct: 123 ------ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
+FD M P N ++ +L A +++ F+S +N + + C+L
Sbjct: 177 RSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WNCLLG 227
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+ K+ + + MN + DVV+W T++ +D A
Sbjct: 228 GFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEA 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +EEA +F EM +++VSW TMI+ YS + A++ M REG+ P+ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRS----ALIDVYSKLGELLEALSVFKEM 116
+VL AC + + + + + V S ++D+ + G L +A ++ K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEA 140
D +W +++ A H + + A
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELA 597
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/455 (44%), Positives = 302/455 (66%), Gaps = 3/455 (0%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
+ IHS +++ G S ++V+++L+ +Y+ G++ A VF +M D V WNS+I FA++
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILH-- 192
+EAL LY +M G D T+ S+L AC + L LG++ HV+++K LH
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK-VMGP 251
N LLD+Y +CG +E+AK +F+ MV K+ +SW+++I GLA NGF EA++LF M+ G
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 252 RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMV 311
P IT +G+L+ACSH G+V +G+ YFR M+ Y I+P EH+GCM+DLL RAG++
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 312 KLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSK 371
+ I M +P+VV WRTLL AC H + DLA +A +IL+L+ +G YVLLSN YA+ +
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 307
Query: 372 MWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLT 431
W+DV ++R+ M G++K PG S +EV ++H F++GDKSHPQ D I +L + RL
Sbjct: 308 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 367
Query: 432 GAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHI 491
GYVP + V D+E E++E+++ +HSEK+AI F ++S P+ I V KNLR+C DCH+
Sbjct: 368 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 427
Query: 492 FAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KL++K+ R IV+RD R+HHF++G CSC DYW
Sbjct: 428 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + A VFD+MPE+++V+W ++I+ ++ + A+ L M +G+ P+ FT
Sbjct: 32 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+L AC + + K++H ++KVGL ++ + L+D+Y++ G + EA ++F EMV
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELGR 176
+ V W S+I A + G EA+ L+K M G + T +L AC+ +++ G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 177 QAHVHV---LKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQ 232
+ + K + + ++D+ + G ++ A ++I + + +V+ W T++
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 233 NGFSLEALKLFDSMKVMGPRPNY 255
+G S L F ++++ PN+
Sbjct: 272 HGDS--DLAEFARIQILQLEPNH 292
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 332/578 (57%), Gaps = 52/578 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSV-----------KLNDRAMKLLVF- 48
MY K +++EA VF M ++VVSW M++ YS + K+ + +K+ V
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 49 -----------------------MLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSIL 82
ML G+ PN T SVL C + + K+IH +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 83 KV-------GLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR--VVWNSIIAAFAQ 133
K G + V + LID+Y+K ++ A ++F + +R V W +I ++Q
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 134 HSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQD--- 188
H D ++AL L +M + T++ L AC ++ L +G+Q H + L+ Q+
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
L + N L+DMY KCGS+ DA+ +F+ M+ K+ ++W++++ G +G+ EAL +FD M+
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
+G + + +T+L VL+ACSH+G++D G YF MK ++G+ PG EHY C++DLLGRAG+L+
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 309 DMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYA 368
++LI EM +P V W L CR H V+L YAA++I +L + G+Y LLSN YA
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Query: 369 NSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFIS 428
N+ W DV +R MR KG++K PGCSW+E K F +GDK+HP EI + L +
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQ 752
Query: 429 RLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGD 488
R+ GYVP+T F L D++ E+++D L HSEKLA+ +GI++ P+ IR+ KNLR+CGD
Sbjct: 753 RIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGD 812
Query: 489 CHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
CH ++++ I++RD R+HHF++G CSC YW
Sbjct: 813 CHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 187/406 (46%), Gaps = 54/406 (13%)
Query: 2 YVKFNLLEEAQVVFDEMP--ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
Y+ L A + P + V W ++I +Y ++ + L M P+ +
Sbjct: 69 YISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY 128
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF V +AC +S ++ H+ L G S+VFV +AL+ +YS+ L +A VF EM
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELG 175
D V WNSII ++A+ AL ++ +M G D TL +VL C + LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 176 RQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+Q H + + Q++ + N L+DMY KCG +++A +F+ M VKDV+SW+ M+AG +Q
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 234 GFSLEALKLFDSMK-----------------------------------VMGPRPNYITI 258
G +A++LF+ M+ G +PN +T+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 259 LGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYG-------CMLDLLGRAGKLDDM 310
+ VL C+ G + G + ++K Y ID + +G ++D+ + K+D
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 311 VKLIHEMNCKP-DVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
+ ++ K DVVTW ++ H + + A E+ + D +
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 61/392 (15%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
MY + L +A+ VFDEM +VVSW ++I +Y+ + A+++ M E G P+
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TFSSVLRACEYL---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T +VL C L S KQ+H + + ++FV + L+D+Y+K G + EA +VF M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 117 VTGDRVVWNSIIA-----------------------------------AFAQHSDGDEAL 141
D V WN+++A +AQ G EAL
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL---------ILH 192
+ ++M +G ++ TL SVL C + L G++ H + +K+ DL ++
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK--DVISWSTMIAGLAQNGFSLEALKLFDSM--KV 248
N L+DMY KC ++ A+ +F+ + K DV++W+ MI G +Q+G + +AL+L M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 249 MGPRPNYITILGVLFACSHAGLVDDG----WHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
RPN TI L AC+ + G + R+ +N + C++D+ +
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN----CLIDMYAKC 526
Query: 305 GKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
G + D + M K + VTW +L+ H
Sbjct: 527 GSISDARLVFDNMMAKNE-VTWTSLMTGYGMH 557
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 329/530 (62%), Gaps = 6/530 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + ++EA+++F E ++V+W M++ Y+ + +KL M ++G + FT
Sbjct: 462 YSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++V + C +L I KQ+H+ +K G + D++V S ++D+Y K G++ A F +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V W ++I+ ++ + + A +++ +MR G D+ T+ ++ +A + ++ LE GRQ
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 179 HVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + LK + D + +L+DMY KCGS++DA +F R+ + ++ +W+ M+ GLAQ+G
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
E L+LF MK +G +P+ +T +GVL ACSH+GLV + + + RSM YGI P EHY C
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
+ D LGRAG + LI M+ + +RTLL ACR + + A ++L+L+ D
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQI 416
+ AYVLLSN YA + W+++ R M+ ++K+PG SWIEV +IH F++ D+S+ Q
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQT 880
Query: 417 DEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKT 476
+ I R++ I + GYVP+T+F L D+E E++E +L +HSEKLA+ FG++S P
Sbjct: 881 ELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTP 940
Query: 477 IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IRV KNLR+CGDCH K IAK+ R IV+RD R+H F+DG+CSCGDYW
Sbjct: 941 IRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 184/348 (52%), Gaps = 21/348 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K A+ VFD M ER+++SW ++I+ + L A+ L + +LR G+ P+ +T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 61 FSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+SVL+A E LS KQ+H +K+ SD FV +ALID YS+ + EA +F E
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 477
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN+++A + Q DG + L L+ M + G +D TL +V + C + + G+
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H + +K +D DL + + +LDMY KCG + A+F F+ + V D ++W+TMI+G +NG
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDP--GR 291
A +F M++MG P+ TI + A S ++ G + ++K DP G
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 292 EHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDACRAH 336
++D+ + G +DD + K I MN + W +L H
Sbjct: 658 S----LVDMYAKCGSIDDAYCLFKRIEMMN----ITAWNAMLVGLAQH 697
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 24/271 (8%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
+Q+H LK+GL+ + V ++LI++Y KL + A +VF M D + WNS+IA AQ+
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSL-LELGRQAHVHVLKFDQ--DLIL 191
EA+ L+ ++ R G DQ T+TSVL+A + + L L +Q HVH +K + D +
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
AL+D Y + +++A+ +F R D+++W+ M+AG Q+ + LKLF M G
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 252 RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMV 311
R + T+ V C ++ G + Y I G + LDL +G LD V
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQV-----HAYAIKSGYD-----LDLWVSSGILDMYV 563
Query: 312 KLIHEMNCK---------PDVVTWRTLLDAC 333
K +M+ PD V W T++ C
Sbjct: 564 K-CGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 35/270 (12%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+KF ++E +V+F+EMP R+VV W M+ AY + + A+ L G+ PN T
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 61 FSSVLRACEYLSDIKQIHS--SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ R SD Q+ S + S++ R+ + Y G+ L F +MV
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D DQ T +L + L LG+Q
Sbjct: 309 SD-------------------------------VECDQVTFILMLATAVKVDSLALGQQV 337
Query: 179 HVHVLKFDQDLIL--HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H LK DL+L N+L++MYCK A+ +F+ M +D+ISW+++IAG+AQNG
Sbjct: 338 HCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLE 397
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACS 266
+EA+ LF + G +P+ T+ VL A S
Sbjct: 398 VEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
K H+ IL + F+ + LI +YSK G L A VF +M D V WNSI+AA+AQ
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 135 SDG-----DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQ 187
S+ +A L++ +R+ + TL+ +L+ C + H + K D
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
D + AL+++Y K G +++ K +F M +DV+ W+ M+ + GF EA+ L +
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 248 VMGPRPNYITI 258
G PN IT+
Sbjct: 239 SSGLNPNEITL 249
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSS----VKLNDRAMKLLVFMLREGVM- 55
MY K L A+ VFD+MP+R++VSW ++++AY+ V N + LL +LR+ V+
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 56 PNMFTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
+ T S +L+ C Y+ + H K+GL+ D FV AL+++Y K G++ E +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLR 164
F+EM D V+WN ++ A+ + +EA+ L +G ++ TL + R
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLAR 254
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/533 (40%), Positives = 321/533 (60%), Gaps = 7/533 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L ++A+ +FDE+PERN+ +W IS + A++ + R PN T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F + L AC +L+ Q+H +L+ G ++DV V + LID Y K ++ + +F EM
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
T + V W S++AA+ Q+ + ++A LY + R+ ++SVL AC GM+ LELGR
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H H +K ++ + + +AL+DMY KCG +ED++ F+ M K++++ +++I G A G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 236 SLEALKLFDSM--KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
AL LF+ M + GP PNY+T + +L ACS AG V++G F SM++ YGI+PG EH
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEH 451
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y C++D+LGRAG ++ + I +M +P + W L +ACR H L AA+ + KLD
Sbjct: 452 YSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLD 511
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
+D+G +VLLSNT+A + W + VR ++ GI+K G SWI V Q+HAF D+SH
Sbjct: 512 PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
Query: 414 PQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPK 473
EI L + + + AGY PD L DLE E++ + HHSEKLA+ FG++S P
Sbjct: 572 ILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPL 631
Query: 474 EKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IR+ KNLRICGDCH F K ++ +R I++RD R+H F+DG+CSC DYW
Sbjct: 632 SVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 171/370 (46%), Gaps = 15/370 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + E A++V P RNVVSWT++IS + A+ M REGV+PN FT
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 FSSVLRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F +A L KQIH+ +K G DVFV + D+Y K +A +F E+
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ WN+ I+ EA+ + + RR + T + L AC+ L LG Q
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 230
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H VL+ FD D+ + N L+D Y KC + ++ IF M K+ +SW +++A QN
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY- 294
+A L+ + + I VL AC AG+ G RS+ + + + E
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GLELGRSI-HAHAVKACVERTI 345
Query: 295 ---GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
++D+ G+ G ++D + EM K ++VT +L+ VD+A +E+
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 352 LDAEDTGAYV 361
T Y+
Sbjct: 405 RGCGPTPNYM 414
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 19/266 (7%)
Query: 77 IHSSILKVGLESDV--FVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
+H+ I+K L+S F+ + LI++YSKL A V + + V W S+I+ AQ+
Sbjct: 28 VHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ--DLILH 192
AL + +MRR G + T +A + L G+Q H +K + D+ +
Sbjct: 87 GHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVG 146
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPR 252
+ DMYCK +DA+ +F+ + +++ +W+ I+ +G EA++ F + +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 253 PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI------DPGREHYGCMLDLLGRAGK 306
PN IT L ACS W + L+G+ D ++D G+ +
Sbjct: 207 PNSITFCAFLNACSD-------WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 307 LDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ + EM K + V+W +L+ A
Sbjct: 260 IRSSEIIFTEMGTK-NAVSWCSLVAA 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 162 VLRACTGMSLLELGRQAHVHVLKF---DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK 218
+L+ S + LGR H ++K L N L++MY K E A+ + +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+V+SW+++I+GLAQNG AL F M+ G PN T F C+
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT-----FPCA 114
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 329/532 (61%), Gaps = 6/532 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + + +A VF+EMP+ +VV W+ MI+ + + A+ L + M V+PN FT
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 61 FSSVLRACEY--LSDI-KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SS+L C S + +Q+H ++KVG + D++V +ALIDVY+K ++ A+ +F E+
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + V WN++I + +G +A ++++ R + T +S L AC ++ ++LG Q
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K + + + + N+L+DMY KCG ++ A+ +FN M DV SW+ +I+G + +G
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+AL++ D MK +PN +T LGVL CS+AGL+D G F SM +GI+P EHY
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+ LLGR+G+LD +KLI + +P V+ WR +L A N + A +A+EILK++ +
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D YVL+SN YA +K W +VA +R++M+ G++KEPG SWIE +H F +G HP
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPD 710
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
+ I+ L + T AGYVPD N VL D++ E+++ L HSE+LA+ +G++ P +
Sbjct: 711 MKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSR 770
Query: 476 T-IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I + KNLRIC DCH K+I+ + QR +VIRD R+HHF GVCSCGD+W
Sbjct: 771 NRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 168/334 (50%), Gaps = 11/334 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YVK ++A +FDEMPERN VS+ T+ Y+ + L + REG N F
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVF 149
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+S L+ L + +HS I+K+G +S+ FV +ALI+ YS G + A +VF+ ++
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D VVW I++ + ++ +++L L MR AGF + T + L+A G+ + +
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +LK + D + LL +Y + G + DA +FN M DV+ WS MIA QNGF
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
EA+ LF M+ PN T+ +L C+ G + G D
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + K+D VKL E++ K + V+W T++
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNE-VSWNTVI 421
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 144/288 (50%), Gaps = 17/288 (5%)
Query: 52 EGVMPNM--FTFSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGEL 106
+ ++P + + ++LR C +D K IH ILK G D+F + L++ Y K G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 107 LEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC 166
+AL++F EM + V + ++ +A + + LY ++ R G + TS L+
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 167 TGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWS 224
+ E+ H ++K +D + + AL++ Y CGS++ A+ +F ++ KD++ W+
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 225 TMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD--DGWHYFRSMK 282
+++ +NG+ ++LKL M++ G PN T L A G D G H + +K
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILK 275
Query: 283 NLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
Y +DP R G +L L + G + D K+ +EM K DVV W ++
Sbjct: 276 TCYVLDP-RVGVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMI 320
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 337/566 (59%), Gaps = 40/566 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM-PNMF 59
++++ ++ A F++M ER++V+W +MIS ++ + RA+ + MLR+ ++ P+ F
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYS--------------- 101
T +SVL AC L + KQIHS I+ G + V +ALI +YS
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 102 ------------------KLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYL 143
KLG++ +A ++F + D V W ++I + QH EA+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ--DLILHNALLDMYCK 201
++ M G + TL ++L + ++ L G+Q H +K + + + NAL+ MY K
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 202 CGSLEDAKFIFNRM-VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILG 260
G++ A F+ + +D +SW++MI LAQ+G + EAL+LF++M + G RP++IT +G
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 261 VLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK 320
V AC+HAGLV+ G YF MK++ I P HY CM+DL GRAG L + + I +M +
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 321 PDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVR 380
PDVVTW +LL ACR H+N+DL AA+ +L L+ E++GAY L+N Y+ W + A++R
Sbjct: 581 PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 381 RTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTN 440
++M+ ++KE G SWIEV ++H F + D +HP+ +EI + + + GYVPDT
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Query: 441 FVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLE 500
VL DLE E +E LRHHSEKLAI FG++S P + T+R+ KNLR+C DCH K I+KL
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 501 QRHIVIRDPIRYHHFRDGVCSCGDYW 526
R I++RD R+HHF+DG CSC DYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 189/409 (46%), Gaps = 93/409 (22%)
Query: 15 FDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR---ACEYL 71
FD++P+R+ VSWTTMI Y ++ +A++++ M++EG+ P FT ++VL A +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 72 SDIKQIHSSILKVGLESDVFVRSALIDVYSK----------------------------- 102
K++HS I+K+GL +V V ++L+++Y+K
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 103 --LGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTL 159
+G++ A++ F++M D V WNS+I+ F Q AL ++ KM R + D+ TL
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 160 TSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLE----------- 206
SVL AC + L +G+Q H H++ FD I+ NAL+ MY +CG +E
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 207 ----------------------DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
AK IF + +DV++W+ MI G Q+G EA+ LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 245 SMKVMGPRPNYITILGVLFACS-----------HAGLVDDGWHYFRSMKNLYGIDPGREH 293
SM G RPN T+ +L S H V G Y S+ N
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN---------- 452
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
++ + +AG + + + C+ D V+W +++ A H + + A
Sbjct: 453 --ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 65/256 (25%)
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
+H ++K GL V++ + L++VYSK G L A +F EM WN++++A+++ D
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 137 GD-------------------------------EALYLYKKMRRAGFPADQSTLTSVLRA 165
D +A+ + M + G Q TLT+VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 166 CTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVV------ 217
+E G++ H ++K ++ + N+LL+MY KCG AKF+F+RMVV
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 218 -------------------------KDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGP 251
+D+++W++MI+G Q G+ L AL +F M +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 252 RPNYITILGVLFACSH 267
P+ T+ VL AC++
Sbjct: 276 SPDRFTLASVLSACAN 291
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 328/530 (61%), Gaps = 5/530 (0%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K +E A+ VFD M ER++VSW TMI Y+ ++ A+ + + M EG + FT
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 SSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SSVL AC D K++H +K ++ +++V +AL+D+Y+K G + +A+ VF+ M
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V W+S++A + Q+ + +EAL LY++ +R +Q TL+SV+ AC+ ++ L G+Q
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + K F ++ + ++ +DMY KCGSL ++ IF+ + K++ W+T+I+G A++
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
E + LF+ M+ G PN +T +L C H GLV++G +F+ M+ YG+ P HY C
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
M+D+LGRAG L + +LI + P W +LL +CR ++N++LA AA+++ +L+ E+
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPEN 465
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQI 416
G +VLLSN YA +K W ++A+ R+ +R ++K G SWI++ ++H F +G+ HP+I
Sbjct: 466 AGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRI 525
Query: 417 DEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKT 476
EI L+ + + GY P L D+E ++E+ L HSEKLA+VFG+M P+
Sbjct: 526 REICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSP 585
Query: 477 IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+R+ KNLRIC DCH F K + +R I++RD R+HHF DG CSCGD+W
Sbjct: 586 VRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 131/236 (55%), Gaps = 7/236 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K ++++A VF+ M +++ V+W++M++ Y K + A+ L R + N FT
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSV+ AC L+ + KQ+H+ I K G S+VFV S+ +D+Y+K G L E+ +F E+
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR- 176
+ +WN+II+ FA+H+ E + L++KM++ G ++ T +S+L C L+E GR
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 177 --QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIAG 229
+ +++ ++ ++D+ + G L +A + + S W +++A
Sbjct: 386 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 26/341 (7%)
Query: 18 MPERNVVSWTT-------MISAYSSVKLNDRAMKLLVFMLREGVMPNMFT--FSS----- 63
+P N++ +T ++ S+ R + +L +E V P ++ FS+
Sbjct: 6 LPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVH 65
Query: 64 -VLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
+L+ C + + K H I+++ LE DV + + LI+ YSK G + A VF M+
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC-TGMSLLELGRQA 178
V WN++I + ++ EAL ++ +MR GF + T++SVL AC LE ++
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKL 184
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K D +L + ALLD+Y KCG ++DA +F M K ++WS+M+AG QN
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSH-AGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL L+ + M N T+ V+ ACS+ A L++ + K+ +G +
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+D+ + G L + + E+ + ++ W T++ H
Sbjct: 305 --VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKH 342
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/528 (41%), Positives = 329/528 (62%), Gaps = 8/528 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YV+ E+AQ FD MP ++ SW TMI+ Y+ ++A +L M+ + N ++
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSW 189
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-VTGD 120
++++ D+++ S KV V +A+I Y K ++ A ++FK+M V +
Sbjct: 190 NAMISGYIECGDLEKA-SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V WN++I+ + ++S ++ L L++ M G + S L+S L C+ +S L+LGRQ H
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 181 HVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
V K D+ +L+ MYCKCG L DA +F M KDV++W+ MI+G AQ+G + +
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
AL LF M RP++IT + VL AC+HAGLV+ G YF SM Y ++P +HY CM+
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG 358
DLLGRAGKL++ +KLI M +P + TLL ACR H+NV+LA +AA+++L+L++++
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAA 488
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
YV L+N YA+ W DVA VR+ M+ + K PG SWIE+ ++H F D+ HP++D
Sbjct: 489 GYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDS 548
Query: 419 ISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIR 478
I ++L + ++ AGY P+ F L ++E EQ+E L HSEKLA+ FG + P+ I+
Sbjct: 549 IHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQ 608
Query: 479 VWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
V+KNLRICGDCH K I+++E+R I++RD R+HHF+DG CSCGDYW
Sbjct: 609 VFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 13/267 (4%)
Query: 87 ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
E D F + ++ Y + +A S F M D WN++I +A+ + ++A L+
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLE 206
M + + ++ + +L + +H + + ++ A++ Y K +E
Sbjct: 181 MMEKNEVSWNAMISGYIECG------DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 207 DAKFIFNRMVV-KDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
A+ +F M V K++++W+ MI+G +N + LKLF +M G RPN + L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 266 SHAGLVDDG--WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
S + G H S L ++ + + G+L D KL M K DV
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCN---DVTALTSLISMYCKCGELGDAWKLFEVMK-KKDV 350
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEIL 350
V W ++ H N D A +E++
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMI 377
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
N IIA + D D AL ++ MR S L + + + R H L
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK--------DPSRMMEAHQL- 115
Query: 185 FDQ----DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
FD+ D +N +L Y + + E A+ F+RM KD SW+TMI G A+ G +A
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP--GREHYGCML 298
+LF SM N ++ ++ G ++ H+F+ + P G + M+
Sbjct: 176 ELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFK-------VAPVRGVVAWTAMI 224
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+A K++ + +M ++VTW ++
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L +A +F+ M +++VV+W MIS Y+ D+A+ L M+ + P+ T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 61 FSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +VL AC + + S + +E + ++D+ + G+L EAL + + M
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
V+ +++ A H + + A + +K+
Sbjct: 448 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/560 (40%), Positives = 329/560 (58%), Gaps = 36/560 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + + +F + + ++ +T I+ S L D+A L V +L + PN FTF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV--------- 112
SS+L++C S K IH+ +LK GL D +V + L+DVY+K G+++ A V
Sbjct: 134 SSLLKSCSTKSG-KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 113 ----------------------FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA 150
F M D V WN +I +AQH ++AL L++K+
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 151 GFP-ADQSTLTSVLRACTGMSLLELGRQAHVHV--LKFDQDLILHNALLDMYCKCGSLED 207
G P D+ T+ + L AC+ + LE GR HV V + ++ + L+DMY KCGSLE+
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 208 AKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK-VMGPRPNYITILGVLFACS 266
A +FN KD+++W+ MIAG A +G+S +AL+LF+ M+ + G +P IT +G L AC+
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
HAGLV++G F SM YGI P EHYGC++ LLGRAG+L + I MN D V W
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLW 432
Query: 327 RTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVK 386
++L +C+ H + L A+ ++ L+ +++G YVLLSN YA+ + VA+VR M+ K
Sbjct: 433 SSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Query: 387 GIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDL 446
GI KEPG S IE++ ++H F GD+ H + EI L + R+ GYVP+TN VLQDL
Sbjct: 493 GIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDL 552
Query: 447 EGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVI 506
E ++E SL+ HSE+LAI +G++S ++++KNLR+C DCH KLI+K+ R IV+
Sbjct: 553 EETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVM 612
Query: 507 RDPIRYHHFRDGVCSCGDYW 526
RD R+HHF DG CSCGD+W
Sbjct: 613 RDRNRFHHFTDGSCSCGDFW 632
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMF 59
MY K LEEA +VF++ P +++V+W MI+ Y+ + A++L M G+ P
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 60 TFSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
TF L+AC + I+ S + G++ + L+ + + G+L A K
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 116 M-VTGDRVVWNSIIAAFAQHSD 136
M + D V+W+S++ + H D
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGD 444
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/533 (40%), Positives = 322/533 (60%), Gaps = 7/533 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y +F L + Q VFD M R+++SW ++I AY + RA+ L M + P+ T
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 61 FSSVLRACEYLSDIKQIHS----SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
S+ L DI+ S ++ K D+ + +A++ +Y+KLG + A +VF +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELG 175
D + WN+II+ +AQ+ EA+ +Y M G A+Q T SVL AC+ L G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H +LK D+ + +L DMY KCG LEDA +F ++ + + W+T+IA +
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G +A+ LF M G +P++IT + +L ACSH+GLVD+G F M+ YGI P +H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
YGCM+D+ GRAG+L+ +K I M+ +PD W LL ACR H NVDL A++ + +++
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
E G +VLLSN YA++ W V E+R KG+RK PG S +EVD ++ F G+++H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 414 PQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPK 473
P +E+ R+L ++L GYVPD FVLQD+E +++E L HSE+LAI F +++ P
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA 770
Query: 474 EKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ TIR++KNLR+CGDCH K I+K+ +R I++RD R+HHF++GVCSCGDYW
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 191/359 (53%), Gaps = 17/359 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMF 59
+Y ++ + A+++FDEMP R++ SW MIS Y A+ L G+ +
Sbjct: 194 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSV 248
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T S+L AC D + IHS +K GLES++FV + LID+Y++ G L + VF M
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + WNSII A+ + A+ L+++MR + D TL S+ + + + R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 177 QAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
L+ F +D+ + NA++ MY K G ++ A+ +FN + DVISW+T+I+G AQN
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 234 GFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGR 291
GF+ EA+++++ M+ G N T + VL ACS AG + G + R +KN +D
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
+ D+ G+ G+L+D + L +++ + + V W TL+ H + + A KE+L
Sbjct: 489 --VTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 142/272 (52%), Gaps = 7/272 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLL-VFMLREGVMPNMF 59
+Y + A+ FD + R+V +W MIS Y + ++ +FML G+ P+
Sbjct: 95 LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154
Query: 60 TFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
TF SVL+AC + D +IH LK G DV+V ++LI +YS+ + A +F EM
Sbjct: 155 TFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
D WN++I+ + Q + EAL L +R D T+ S+L ACT G H
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
+ +K + +L + N L+D+Y + G L D + +F+RM V+D+ISW+++I N L
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
A+ LF M++ +P+ +T++ + S G
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 140/273 (51%), Gaps = 12/273 (4%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
++ R C L K +H+ ++ +V + + L+++Y LG + A F + D
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 123 VWNSIIAAFAQHSDGDEALYLYKK-MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
WN +I+ + + + E + + M +G D T SVL+AC ++++ G + H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVID-GNKIHCL 175
Query: 182 VLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
LKF D+ + +L+ +Y + ++ +A+ +F+ M V+D+ SW+ MI+G Q+G + EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L L + ++ M + +T++ +L AC+ AG + G S +G++ ++D
Sbjct: 236 LTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLID 290
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
L G+L D K+ M + D+++W +++ A
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 324/531 (61%), Gaps = 6/531 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + + E +++FDEMPE + VS+ +IS+YS + ++ M G F F
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+++L LS + +Q+H L +S + V ++L+D+Y+K EA +FK +
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V W ++I+ + Q L L+ KMR + ADQST +VL+A + L LG+Q
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 179 HVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +++ +++ + L+DMY KCGS++DA +F M ++ +SW+ +I+ A NG
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
A+ F M G +P+ ++ILGVL ACSH G V+ G YF++M +YGI P ++HY C
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA-E 355
MLDLLGR G+ + KL+ EM +PD + W ++L+ACR H+N LA AA+++ ++
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D AYV +SN YA + W V +V++ MR +GI+K P SW+EV+ +IH F D++HP
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
DEI R++N+ + + GY PDT+ V+QD++ + + +SL++HSE+LA+ F ++S P+
Sbjct: 715 GDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC 774
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I V KNLR C DCH KLI+K+ +R I +RD R+HHF +GVCSCGDYW
Sbjct: 775 PIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 176/342 (51%), Gaps = 19/342 (5%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + L+ A V+F+E+PE++ V++ T+I+ Y L ++ L + M + G P+ FTF
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S VL+A L D +Q+H+ + G D V + ++D YSK +LE +F EM
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V +N +I++++Q + +L+ +++M+ GF ++L +S L++GRQ
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 179 HVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H L D ILH N+L+DMY KC E+A+ IF + + +SW+ +I+G Q G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAG--LVDDGWHYF--RSMKNLYGIDPGRE 292
LKLF M+ R + T VL A + L+ H F RS NL + G
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSG-- 490
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPD--VVTWRTLLDA 332
++D+ + G + D V++ EM PD V+W L+ A
Sbjct: 491 --SGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISA 527
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + EEA+++F +P+R VSWT +IS Y L+ +KL M + + T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F++VL+A + + KQ+H+ I++ G +VF S L+D+Y+K G + +A+ VF+EM
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR- 176
+ V WN++I+A A + DG+ A+ + KM +G D ++ VL AC+ +E G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 177 --QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMI 227
QA + + +LD+ + G +A+ + + M + D I WS+++
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 9/258 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG--VMPNMF 59
+VK + A+ +FD MP+R VV+WT ++ Y+ D A KL M R +P+
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 60 TFSSVLRACE---YLSDIKQIHSSILKVGLESDVF--VRSALIDVYSKLGELLEALSVFK 114
TF+++L C + + Q+H+ +K+G +++ F V + L+ Y ++ L A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
E+ D V +N++I + + E+++L+ KMR++G T + VL+A G+ L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G+Q H + F +D + N +LD Y K + + + +F+ M D +S++ +I+ +Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 233 NGFSLEALKLFDSMKVMG 250
+L F M+ MG
Sbjct: 329 ADQYEASLHFFREMQCMG 346
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 94 SALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-- 151
+ +I + K G++ A +F M V W ++ +A++S DEA L+++M R+
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 152 -FPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQD--LILHNALLDMYCKCGSLE 206
P D T T++L C Q H +K FD + L + N LL YC+ L+
Sbjct: 143 TLP-DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
A +F + KD ++++T+I G ++G E++ LF M+ G +P+ T GVL A
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +++A VF+EMP+RN VSW +ISA++ + A+ M+ G+ P+ +
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
VL AC + ++Q + G+ + ++D+ + G EA + EM
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 117 -VTGDRVVWNSIIAAFAQHSD------GDEALYLYKKMRRAG 151
D ++W+S++ A H + E L+ +K+R A
Sbjct: 616 PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAA 657
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/544 (42%), Positives = 323/544 (59%), Gaps = 23/544 (4%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYS-SVKLNDRAMKLLVFMLREG-VMPNMFTFS 62
F+ + A VFD + + W T+I A + V + A L ML G P+ TF
Sbjct: 96 FSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFP 155
Query: 63 SVLRACEYL---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
VL+AC Y+ S+ KQ+H I+K G DV+V + LI +Y G L A VF EM
Sbjct: 156 FVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
V WNS+I A + + D AL L+++M+R+ F D T+ SVL AC G+ L LG AH
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 180 VHVLK-----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+L+ D+++ N+L++MYCKCGSL A+ +F M +D+ SW+ MI G A +G
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 235 FSLEALKLFDSM--KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+ EA+ FD M K RPN +T +G+L AC+H G V+ G YF M Y I+P E
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC-RAHRNVDLATYAAKEIL- 350
HYGC++DL+ RAG + + + ++ M KPD V WR+LLDAC + +V+L+ A+ I+
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 351 -KLDAEDT-----GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIH 404
K D E + GAYVLLS YA++ WNDV VR+ M GIRKEPGCS IE++ H
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 405 AFILGDKSHPQIDEISRQLNQFISRLTGAGYVPD-TNFVLQDLEGE-QREDSLRHHSEKL 462
F GD SHPQ +I +QL RL GY+PD + L D + +E SLR HSE+L
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERL 574
Query: 463 AIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSC 522
AI FG+++ P + IR++KNLR+C DCH KLI+K+ I++RD +R+HHF+DG CSC
Sbjct: 575 AIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSC 634
Query: 523 GDYW 526
DYW
Sbjct: 635 LDYW 638
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 13/250 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y L+ A+ VFDEMPER++VSW +MI A D A++L M R P+ +T
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYT 253
Query: 61 FSSVLRACEYLSDIKQ---IHSSILK---VGLESDVFVRSALIDVYSKLGELLEALSVFK 114
SVL AC L + H+ +L+ V + DV V+++LI++Y K G L A VF+
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLL 172
M D WN++I FA H +EA+ + +M +R + T +L AC +
Sbjct: 314 GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFV 373
Query: 173 ELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIA 228
GRQ +++ + L + ++D+ + G + +A + M +K D + W +++
Sbjct: 374 NKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLD 433
Query: 229 GLAQNGFSLE 238
+ G S+E
Sbjct: 434 ACCKKGASVE 443
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESD---VFVRSALIDVYSKLGELLEALSVFKEMVTG 119
S+ C +S +KQ+H+ L+ + +F+ ++ + S ++ A VF +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 120 DRVVWNSIIAAFAQH-SDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+WN++I A A S +EA LY+KM R D+ T VL+AC + G+Q
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K F D+ ++N L+ +Y CG L+ A+ +F+ M + ++SW++MI L + G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
AL+LF M+ P+ T+ VL AC+ G + G
Sbjct: 233 YDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLG 270
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 312/523 (59%), Gaps = 10/523 (1%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
++EA+++FDEM ERNVV+WTTMI+ Y D A KL VMP S
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF------EVMPEKTEVSWTSML 241
Query: 68 CEY-LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
Y LS + +V V +A+I + ++GE+ +A VF M D W
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
+I A+ + EAL L+ +M++ G +L S+L C ++ L+ GRQ H H+++
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
FD D+ + + L+ MY KCG L AK +F+R KD+I W+++I+G A +G EALK+F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
M G PN +T++ +L ACS+AG +++G F SM++ + + P EHY C +D+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 305 GKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLS 364
G++D ++LI M KPD W LL AC+ H +DLA AAK++ + + ++ G YVLLS
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 365 NTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD-KSHPQIDEISRQL 423
+ A+ W DVA VR+ MR + K PGCSWIEV K++H F G K+HP+ I L
Sbjct: 542 SINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
Query: 424 NQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNL 483
+ L AGY PD + VL D++ E++ DSL HSE+LA+ +G++ P+ IRV KNL
Sbjct: 602 EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNL 661
Query: 484 RICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
R+CGDCH KLI+K+ +R I++RD R+HHF +G CSC DYW
Sbjct: 662 RVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K ++ EA+ VF+ MPERNVVSWT M+ Y + A L M + F
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
++ + ++++ ++ V DV + +I + G + EA +F EM +
Sbjct: 149 GGLIDDGR-IDKARKLY-DMMPV---KDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V W ++I + Q++ D A L++ M + + TS+L T +E +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEE-FFE 258
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
V+ + +I NA++ + + G + A+ +F+ M +D +W MI + GF LEAL
Sbjct: 259 VMPM-KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 242 LFDSMKVMGPRPNYITILGVLFACS 266
LF M+ G RP++ +++ +L C+
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCA 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK L +A++VFD ++++ W ++IS Y+S L + A+K+ M G MPN T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
++L AC Y +++ S K + V S +D+ + G++ +A+ + + M
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
+ D VW +++ A HS D A KK+
Sbjct: 495 TIKPDATVWGALLGACKTHSRLDLAEVAAKKL 526
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 64/331 (19%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+ EA+ FD + + + SW +++S Y S L A +L M
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----------------- 75
Query: 68 CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
E +V + L+ Y K ++EA +VF+ M + V W ++
Sbjct: 76 -------------------ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAM 116
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD- 186
+ + Q EA L+ +M P +V+ L++ GR L +D
Sbjct: 117 VKGYMQEGMVGEAESLFWRM-----PERNEVSWTVMFG----GLIDDGRIDKARKL-YDM 166
Query: 187 ---QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
+D++ ++ C+ G +++A+ IF+ M ++V++W+TMI G QN A KLF
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC--MLDLL 301
+ M P ++ +L + +G ++D +F M P + C M+
Sbjct: 227 EVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGF 275
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G G++ ++ M + D TWR ++ A
Sbjct: 276 GEVGEISKARRVFDLMEDR-DNATWRGMIKA 305
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 328/572 (57%), Gaps = 50/572 (8%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
Y + LEE + EM E N+VSW ++S ++ + A+ + + G P+
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 58 MFTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
T SSVL + E L+ + IH ++K GL D V SA+ID+Y K G + +S+F
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 115 EM-----------VTG------------------------DRVVWNSIIAAFAQHSDGDE 139
+ +TG + V W SIIA AQ+ E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 140 ALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH-----VHVLKFDQDLILHNA 194
AL L+++M+ AG + T+ S+L AC ++ L GR H VH+L ++ + +A
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL---DNVHVGSA 428
Query: 195 LLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPN 254
L+DMY KCG + ++ +FN M K+++ W++++ G + +G + E + +F+S+ +P+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 255 YITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLI 314
+I+ +L AC GL D+GW YF+ M YGI P EHY CM++LLGRAGKL + LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 315 HEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWN 374
EM +PD W LL++CR NVDLA AA+++ L+ E+ G YVLLSN YA MW
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 375 DVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAG 434
+V +R M G++K PGCSWI+V +++ + GDKSHPQID+I+ ++++ + +G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 435 YVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAK 494
+ P+ +F L D+E +++E L HSEKLA+VFG+++ P ++V KNLRICGDCH K
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 495 LIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I+ R I IRD R+HHF+DG+CSCGD+W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 192/427 (44%), Gaps = 86/427 (20%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y +N +A +V +P+ + S++++I A + KL +++ + M G++P+
Sbjct: 60 YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVL 119
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-- 116
++ + C LS K QIH GL+ D FV+ ++ +Y + G + +A VF M
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 117 ---------------------------------VTGDRVVWNSIIAAFAQHSDGDEALYL 143
+ + V WN I++ F + EA+ +
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCK 201
++K+ GF DQ T++SVL + +L +GR H +V+K +D + +A++DMY K
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 202 CGSLEDAKFIFNRMVVKD-----------------------------------VISWSTM 226
G + +FN+ + + V+SW+++
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
IAG AQNG +EAL+LF M+V G +PN++TI +L AC + + G ++
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 287 IDPGREHYG-CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYA 345
+D H G ++D+ + G++ ++ +++ M ++V W +L++ H
Sbjct: 420 LD--NVHVGSALIDMYAKCGRI-NLSQIVFNMMPTKNLVCWNSLMNGFSMHGK------- 469
Query: 346 AKEILKL 352
AKE++ +
Sbjct: 470 AKEVMSI 476
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 9/268 (3%)
Query: 76 QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
Q H+ ILK G ++D ++ + LI YS +A V + + ++S+I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 136 DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV--HVLKFDQDLILHN 193
+++ ++ +M G D L ++ + C +S ++G+Q H V D D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRP 253
++ MY +CG + DA+ +F+RM KDV++ S ++ A+ G E +++ M+ G
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKL 313
N ++ G+L + +G + F+ + +L G P + +L +G + L +M +L
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEML-NMGRL 273
Query: 314 IHEMNCKPDVVTWRTLLDACRAHRNVDL 341
IH V+ L D C +D+
Sbjct: 274 IHGY-----VIKQGLLKDKCVISAMIDM 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 8/176 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +Q+VF+ MP +N+V W ++++ +S M + ++R + P+ +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 61 FSSVLRACEY--LSDIKQIHSSIL--KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F+S+L AC L+D + ++ + G++ + S ++++ + G+L EA + KEM
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST--LTSVLRACTGM 169
D VW +++ + ++ D A +K+ P + T L S + A GM
Sbjct: 552 PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLE-PENPGTYVLLSNIYAAKGM 606
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 324/539 (60%), Gaps = 14/539 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPE-RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y K LL EA VF M E R+ VSW +MI AY K +A+ L M+ +G +MFT
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGE---LLEALSVFK 114
+SVL A L + +Q H ++K G + V S LID YSK G + ++ VF+
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 115 EMVTGDRVVWNSIIAAFAQHSD-GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
E+++ D VVWN++I+ ++ + + +EA+ +++M+R G D + V AC+ +S
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 174 LGRQAHVHVLKF---DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
+Q H +K + ++NAL+ +Y K G+L+DA+++F+RM + +S++ MI G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
AQ+G EAL L+ M G PN IT + VL AC+H G VD+G YF +MK + I+P
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
EHY CM+DLLGRAGKL++ + I M KP V W LL ACR H+N+ LA AA E++
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM 542
Query: 351 KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD 410
+ YV+L+N YA+++ W ++A VR++MR K IRK+PGCSWIEV K+ H F+ D
Sbjct: 543 VMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
Query: 411 KSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDS---LRHHSEKLAIVFG 467
SHP I E++ L + + ++ GYV D + + + D L HHSEKLA+ FG
Sbjct: 603 WSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFG 662
Query: 468 IMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+MS + + V KNLRICGDCH K ++ + R I++RD +R+H F+DG CSCGDYW
Sbjct: 663 LMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 157/274 (57%), Gaps = 8/274 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + + A+ +FDE+P+ + VS+ T+IS Y+ + AM L M + G + FT
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 62 SSVLRA-CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-VTG 119
S ++ A C+ + IKQ+H + G +S V +A + YSK G L EA+SVF M
Sbjct: 144 SGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
D V WNS+I A+ QH +G +AL LYK+M GF D TL SVL A T + L GRQ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLE---DAKFIFNRMVVKDVISWSTMIAGLAQN- 233
++K F Q+ + + L+D Y KCG + D++ +F ++ D++ W+TMI+G + N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
S EA+K F M+ +G RP+ + + V ACS+
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 163/379 (43%), Gaps = 67/379 (17%)
Query: 87 ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
E +VF + ++ Y+K ++ A +F E+ D V +N++I+ +A + A+ L+K+
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGS 204
MR+ GF D TL+ ++ AC ++L +Q H + FD ++NA + Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 205 LEDAKFIFNRM-VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
L +A +F M ++D +SW++MI Q+ +AL L+ M G + + T+ VL
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 264 ACS-----------HAGLVDDGWHYFRSMKNLYGIDPGREHYGC-MLDLLGRAGKLDDMV 311
A + H L+ G+H H G ++D + G D M
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQ-------------NSHVGSGLIDFYSKCGGCDGMY 295
Query: 312 ---KLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD----AEDTGAYVLLS 364
K+ E+ PD+V W T++ N +L+ A K ++ D ++V ++
Sbjct: 296 DSEKVFQEI-LSPDLVVWNTMISG--YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 365 NTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
+ +N + C KQIH L KSH + IS N
Sbjct: 353 SACSN------------------LSSPSQC------KQIHG--LAIKSHIPSNRISVN-N 385
Query: 425 QFISRLTGAGYVPDTNFVL 443
IS +G + D +V
Sbjct: 386 ALISLYYKSGNLQDARWVF 404
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K L++A+ VFD MPE N VS+ MI Y+ A+ L ML G+ PN T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 61 FSSVLRAC----------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
F +VL AC EY + +K+ K+ E++ + S +ID+ + G+L EA
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKE----TFKIEPEAEHY--SCMIDLLGRAGKLEEAE 503
Query: 111 SVFKEM-VTGDRVVWNSIIAAFAQHSD 136
M V W +++ A +H +
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKN 530
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/569 (37%), Positives = 333/569 (58%), Gaps = 44/569 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + A+ VFDEM R+VV+W TMI Y L D A KL M VMP+
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDV------------------------------ 90
+++ AC +++ + +I + +E+DV
Sbjct: 215 LCNIVSACGRTGNMRY-NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 91 -----FVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYK 145
FV +A++ YSK G L +A +F + D V W ++I+A+ + EAL +++
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKCG 203
+M +G D ++ SV+ AC + +L+ + H +HV + +L ++NAL++MY KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
L+ + +F +M ++V+SWS+MI L+ +G + +AL LF MK PN +T +GVL+
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
CSH+GLV++G F SM + Y I P EHYGCM+DL GRA L + +++I M +V
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
V W +L+ ACR H ++L +AAK IL+L+ + GA VL+SN YA + W DV +RR M
Sbjct: 514 VIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVM 573
Query: 384 RVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVL 443
K + KE G S I+ + + H F++GDK H Q +EI +L++ +S+L AGYVPD VL
Sbjct: 574 EEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVL 633
Query: 444 QDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK------TIRVWKNLRICGDCHIFAKLIA 497
D+E E+++D + HSEKLA+ FG+M+ KE+ IR+ KNLR+C DCH+F KL++
Sbjct: 634 VDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVS 693
Query: 498 KLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
K+ +R I++RD R+H +++G+CSC DYW
Sbjct: 694 KVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 34/301 (11%)
Query: 65 LRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG-DRVV 123
L C+ L+ IKQ+H+ IL+ + + + V S L AL+VF + + + +V
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIV 78
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
+N + ++ S+ + Y+++R G DQ + +L+A + +S L G + H
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 184 KFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
K D + +DMY CG + A+ +F+ M +DV++W+TMI + G EA K
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAG-----------LVDD----GWHYFRSMKNLYG 286
LF+ MK P+ + + ++ AC G L+++ H ++ +Y
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 287 ----IDPGREHY-----------GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD 331
+D RE + M+ + G+LDD ++I + K D+V W T++
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD-AQVIFDQTEKKDLVCWTTMIS 317
Query: 332 A 332
A
Sbjct: 318 A 318
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 317/526 (60%), Gaps = 6/526 (1%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
++E+A +F M E++ VSW MI + L A++ M +G+ + + F SVL
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 66 RACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
AC L I KQIH+ I++ + ++V SALID+Y K L A +VF M + V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
W +++ + Q +EA+ ++ M+R+G D TL + AC +S LE G Q H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 183 LK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+ + + N+L+ +Y KCG ++D+ +FN M V+D +SW+ M++ AQ G ++E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
+LFD M G +P+ +T+ GV+ ACS AGLV+ G YF+ M + YGI P HY CM+DL
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY 360
R+G+L++ ++ I+ M PD + W TLL ACR N+++ +AA+ +++LD Y
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEIS 420
LLS+ YA+ W+ VA++RR MR K ++KEPG SWI+ ++H+F D+S P +D+I
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 421 RQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVW 480
+L + +++ GY PDT+FV D+E + L +HSE+LAI FG++ P + IRV
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVG 697
Query: 481 KNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KNLR+C DCH K I+ + R I++RD +R+H F+DG CSCGD+W
Sbjct: 698 KNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 185/371 (49%), Gaps = 46/371 (12%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG----VMPN 57
Y K L+ E + F+++P+R+ V+W +I YS L A+K M+R+
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF---- 113
+ T + + ++S KQIH ++K+G ES + V S L+ +Y+ +G + +A VF
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 114 -------KEMVTG-------------------DRVVWNSIIAAFAQHSDGDEALYLYKKM 147
++ G D V W ++I AQ+ EA+ +++M
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 148 RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSL 205
+ G DQ SVL AC G+ + G+Q H +++ F + + +AL+DMYCKC L
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 206 EDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
AK +F+RM K+V+SW+ M+ G Q G + EA+K+F M+ G P++ T+ + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 266 SHAGLVDDGWHYFRSMKNLYGIDPGREHY----GCMLDLLGRAGKLDDMVKLIHEMNCKP 321
++ +++G + I G HY ++ L G+ G +DD +L +EMN +
Sbjct: 382 ANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR- 435
Query: 322 DVVTWRTLLDA 332
D V+W ++ A
Sbjct: 436 DAVSWTAMVSA 446
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 145/274 (52%), Gaps = 12/274 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L A+ VFD M ++NVVSWT M+ Y + A+K+ + M R G+ P+ +T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ AC +S ++ Q H + GL V V ++L+ +Y K G++ ++ +F EM
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W ++++A+AQ E + L+ KM + G D TLT V+ AC+ L+E G Q
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-Q 492
Query: 178 AHVHVLKFDQDLIL----HNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQ 232
+ ++ + ++ ++ ++D++ + G LE+A +FI D I W+T+++
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 233 NGFSLEALK-LFDSMKVMGP-RPNYITILGVLFA 264
G +LE K +S+ + P P T+L ++A
Sbjct: 553 KG-NLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 87 ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
+ ++F + L+ YSK G + E S F+++ D V WN +I ++ A+ Y
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 147 MRRAGFPADQS--TLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKC 202
M R F A+ + TL ++L+ + + LG+Q H V+K F+ L++ + LL MY
Sbjct: 129 MMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 203 GSLEDAKFIFN------------------------------RMVVKDVISWSTMIAGLAQ 232
G + DAK +F R + KD +SW+ MI GLAQ
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
NG + EA++ F MKV G + + VL AC G +++G
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/532 (38%), Positives = 317/532 (59%), Gaps = 6/532 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + E++ V +MP R+VV+W +I Y+ + D+A+ M EGV N T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 61 FSSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
SVL AC D+ K +H+ I+ G ESD V+++LI +Y+K G+L + +F +
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + WN+++AA A H G+E L L KMR G DQ + + L A +++LE G+
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H +K F+ D + NA DMY KCG + + + V + + SW+ +I+ L ++G
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ E F M MG +P ++T + +L ACSH GLVD G Y+ + +G++P EH
Sbjct: 646 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 705
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++DLLGR+G+L + I +M KP+ + WR+LL +C+ H N+D AA+ + KL+
Sbjct: 706 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 765
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
ED YVL SN +A + W DV VR+ M K I+K+ CSW+++ ++ +F +GD++HP
Sbjct: 766 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 825
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
Q EI +L + +GYV DT+ LQD + EQ+E +L +HSE+LA+ + +MS P+
Sbjct: 826 QTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEG 885
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
T+R++KNLRIC DCH K ++++ R IV+RD R+HHF G+CSC DYW
Sbjct: 886 STVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 41/385 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY EA +VF +MP ++++SW ++++++ + + A+ LL M+ G N T
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+S L AC ++ + +H ++ GL + + +AL+ +Y K+GE+ E+ V +M
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC-TGMSLLELGR 176
D V WN++I +A+ D D+AL ++ MR G ++ T+ SVL AC LLE G+
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H +++ F+ D + N+L+ MY KCG L ++ +FN + +++I+W+ M+A A +G
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHY---------------FR 279
E LKL M+ G + + L A + ++++G F
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 280 SMKNLY---------------GIDPGREHYGCMLDLLGRAGKLDDMVKLIH---EMNCKP 321
+ ++Y ++ + ++ LGR G +++ H EM KP
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 664
Query: 322 DVVTWRTLLDACRAHRNVD--LATY 344
VT+ +LL AC VD LA Y
Sbjct: 665 GHVTFVSLLTACSHGGLVDKGLAYY 689
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 175/340 (51%), Gaps = 16/340 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY KF ++ A+ +FD MP RN VSW TM+S V L M+ M G+ P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 FSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+S++ AC + Q+H + K GL SDV+V +A++ +Y G + + VF+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V W S++ ++ + +E + +YK MR G ++++++ V+ +C + LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q V+K + L + N+L+ M G+++ A +IF++M +D ISW+++ A AQNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
E+ ++F M+ N T+ +L H D + R + L + G +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV----DHQKWGRGIHGLV-VKMGFDSV 295
Query: 295 GCMLDLLGR----AGKLDDMVKLIHEMNCKPDVVTWRTLL 330
C+ + L R AG+ + + +M K D+++W +L+
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 334
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 41/361 (11%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A +FD+M ER+ +SW ++ +AY+ + + ++ M R N T S++L +
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 71 LSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+ K IH ++K+G +S V V + L+ +Y+ G +EA VFK+M T D + WNS+
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH----VHVL 183
+A+F +AL L M +G + T TS L AC E GR H V L
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
++Q I+ NAL+ MY K G + +++ + +M +DV++W+ +I G A++ +AL F
Sbjct: 394 FYNQ--IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 244 DSMKVMGPRPNYITILGVLFAC------------SHAGLVDDGWHYFRSMKNLYGIDPGR 291
+M+V G NYIT++ VL AC HA +V G+ +KN
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN-------- 503
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
++ + + G L L + ++ + +++TW +L A H + +E+LK
Sbjct: 504 ----SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGH-------GEEVLK 551
Query: 352 L 352
L
Sbjct: 552 L 552
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/532 (40%), Positives = 327/532 (61%), Gaps = 9/532 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVKF EA++V D + E++VV T +I YS + A+K ML E V PN +T
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++SVL +C L DI K IH ++K G ES + +++L+ +Y + + ++L VFK +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
++V W S+I+ Q+ + AL ++KM R + TL+S LR C+ +++ E GRQ
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V K FD+D + L+D+Y KCG + A+ +F+ + DVIS +TMI AQNGF
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL LF+ M +G +PN +T+L VL AC+++ LV++G F S + I +HY
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYA 508
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+DLLGRAG+L++ L E+ PD+V WRTLL AC+ HR V++A ++IL+++
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG 567
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK-SHP 414
D G +L+SN YA++ WN V E++ M+ ++K P SW+E++K+ H F+ GD SHP
Sbjct: 568 DEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHP 627
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
++I L + I + GYV D + V QD+E +E SL HSEKLAI F +
Sbjct: 628 NSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG- 686
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+IR+ KNLR+C DCH + K+++++ +R I+ RD R+HHFRDG CSCGDYW
Sbjct: 687 GSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 174/329 (52%), Gaps = 8/329 (2%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
++ A+ VFD M ER++V+W ++I+ + + A+++ M+ V+P+ +T SSV +A
Sbjct: 115 IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
Query: 68 CEYLS---DIKQIHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
LS + ++ H + +GLE S+VFV SAL+D+Y K G+ EA V + D V+
Sbjct: 175 FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVL 234
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
++I ++Q + EA+ ++ M ++ T SVL +C + + G+ H ++
Sbjct: 235 ITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
Query: 184 K--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
K F+ L +LL MY +C ++D+ +F + + +SW+++I+GL QNG AL
Sbjct: 295 KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALI 354
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
F M +PN T+ L CS+ + ++G + YG D + ++DL
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLY 413
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G+ G DM +L+ + + DV++ T++
Sbjct: 414 GKCG-CSDMARLVFDTLSEVDVISLNTMI 441
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 156/317 (49%), Gaps = 10/317 (3%)
Query: 54 VMPNMFTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
+ FS +LR C +S IK I + +LK G +++ S L+D K G++ A
Sbjct: 61 TLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYAR 119
Query: 111 SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
VF M V WNS+IA +H EA+ +Y+ M D+ TL+SV +A + +S
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 171 LLELGRQAH--VHVLKFD-QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMI 227
L + +++H +L + ++ + +AL+DMY K G +AK + +R+ KDV+ + +I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
G +Q G EA+K F SM V +PN T VL +C + + +G + G
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGF 298
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAK 347
+ +L + R +DD +++ + P+ V+W +L+ + ++A +
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIE-YPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 348 EILKLDAEDTGAYVLLS 364
++++ D+ ++ L S
Sbjct: 358 KMMR-DSIKPNSFTLSS 373
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 318/531 (59%), Gaps = 6/531 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LE A+ +FD M ERNVVSW +MI AY + AM + ML EGV P +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
L AC L D+++ IH +++GL+ +V V ++LI +Y K E+ A S+F ++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V WN++I FAQ+ +AL + +MR D T SV+ A +S+ +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V++ D+++ + AL+DMY KCG++ A+ IF+ M + V +W+ MI G +GF
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
AL+LF+ M+ +PN +T L V+ ACSH+GLV+ G F MK Y I+ +HYG
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
M+DLLGRAG+L++ I +M KP V + +L AC+ H+NV+ A AA+ + +L+ +
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D G +VLL+N Y + MW V +VR +M +G+RK PGCS +E+ ++H+F G +HP
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
+I L + I + AGYVPDTN VL +E + +E L HSEKLAI FG+++
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
TI V KNLR+C DCH K I+ + R IV+RD R+HHF++G CSCGDYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 193/367 (52%), Gaps = 8/367 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
++ ++ ++EA VF+ + + V + TM+ ++ V D+A++ V M + V P ++
Sbjct: 78 LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ +L+ C +++ K+IH ++K G D+F + L ++Y+K ++ EA VF M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN+I+A ++Q+ AL + K M T+ SVL A + + L+ +G++
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + ++ FD + + AL+DMY KCGSLE A+ +F+ M+ ++V+SW++MI QN
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EA+ +F M G +P ++++G L AC+ G ++ G + + G+D
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVN 376
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL-LDACRAHRNVDLATYAAKEILKLDA 354
++ + + ++D + ++ + +V+W + L + R +D Y ++ +
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 355 EDTGAYV 361
DT YV
Sbjct: 436 PDTFTYV 442
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 162/302 (53%), Gaps = 6/302 (1%)
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
+L C L +++QI + K GL + F ++ L+ ++ + G + EA VF+ + + V+
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
+++++ FA+ SD D+AL + +MR T +L+ C + L +G++ H ++
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 184 K--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
K F DL L +MY KC + +A+ +F+RM +D++SW+T++AG +QNG + AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGCMLDL 300
+ SM +P++ITI+ VL A S L+ G + +M++ G D ++D+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS--GFDSLVNISTALVDM 280
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY 360
+ G L+ +L M + +VV+W +++DA + N A +++L + T
Sbjct: 281 YAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 361 VL 362
V+
Sbjct: 340 VM 341
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/524 (39%), Positives = 316/524 (60%), Gaps = 8/524 (1%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML--REGVMPNMFTFSSVLRAC 68
A+ +FDEMPER++VSW ++IS YS + ++L M+ G PN TF S++ AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 69 EYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
Y ++ IH ++K G+ +V V +A I+ Y K G+L + +F+++ + V WN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-- 183
++I Q+ ++ L + RR G DQ+T +VLR+C M ++ L + H ++
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
F + + ALLD+Y K G LED+ +F+ + D ++W+ M+A A +GF +A+K F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
+ M G P+++T +L ACSH+GLV++G HYF +M Y IDP +HY CM+DLLGR
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLL 363
+G L D LI EM +P W LL ACR +++ L T AA+ + +L+ D YV+L
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVML 444
Query: 364 SNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQL 423
SN Y+ S +W D + +R M+ KG+ + GCS+IE +IH F++GD SHP+ ++I ++L
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Query: 424 NQFISRLTGA-GYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
+ ++ GY T FVL D+ + +E+ + HSEK+A+ FG++ + I + KN
Sbjct: 505 KEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKN 564
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LRICGDCH AK I+ +E+R I+IRD R+HHF DG CSC DYW
Sbjct: 565 LRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
N+ + + +++C + + +H ++K F+ L+ Y +LG + A +F EM
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLLEL 174
D V WNS+I+ ++ + + +M GF ++ T S++ AC E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 175 GRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
GR H V+KF +++ + NA ++ Y K G L + +F + +K+++SW+TMI Q
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLV--DDGWHYFRSMKNLYGIDPG 290
NG + + L F+ + +G P+ T L VL +C G+V G H + G
Sbjct: 213 NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH---GLIMFGGFSGN 269
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ +LDL + G+L+D + HE+ PD + W +L A H
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATH 314
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 25/240 (10%)
Query: 1 MYVKFNLLEEAQVV-------------------FDEMPERNVVSWTTMISAYSSVKLNDR 41
+ +KF +LEE +VV F+++ +N+VSW TMI + L ++
Sbjct: 159 LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEK 218
Query: 42 AMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALID 98
+ R G P+ TF +VLR+CE + ++ IH I+ G + + +AL+D
Sbjct: 219 GLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLD 278
Query: 99 VYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
+YSKLG L ++ +VF E+ + D + W +++AA+A H G +A+ ++ M G D T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 159 LTSVLRACTGMSLLELGR---QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM 215
T +L AC+ L+E G+ + + D L ++ ++D+ + G L+DA + M
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K LE++ VF E+ + ++WT M++AY++ A+K M+ G+ P+ T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVR----SALIDVYSKLGELLEALSVFKEM 116
F+ +L AC + +++ + + R S ++D+ + G L +A + KEM
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Query: 117 -VTGDRVVWNSIIAAFAQHSD 136
+ VW +++ A + D
Sbjct: 399 PMEPSSGVWGALLGACRVYKD 419
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 319/540 (59%), Gaps = 14/540 (2%)
Query: 1 MYVKFNL---LEEAQVVFDEMPERNVVSWTTMISAY-SSVKLNDRAMKLLVFMLREG-VM 55
MY K + +++ + VFD M + +V+SWT +I+ Y + L A+ L M+ +G V
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 56 PNMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
PN FTFSS +AC LSD KQ+ K GL S+ V +++I ++ K + +A
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F+ + + V +N+ + ++ + ++A L ++ T S+L + +
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 173 ELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
G Q H V+K + + NAL+ MY KCGS++ A +FN M ++VISW++MI G
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
A++GF++ L+ F+ M G +PN +T + +L ACSH GLV +GW +F SM + I P
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
EHY CM+DLL RAG L D + I+ M + DV+ WRT L ACR H N +L AA++IL
Sbjct: 611 MEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKIL 670
Query: 351 KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD 410
+LD + AY+ LSN YA + W + E+RR M+ + + KE GCSWIEV +IH F +GD
Sbjct: 671 ELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGD 730
Query: 411 KSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDS----LRHHSEKLAIVF 466
+HP +I +L++ I+ + GYVPDT+ VL LE E E L HSEK+A+ F
Sbjct: 731 TAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAF 790
Query: 467 GIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
G++S K + +RV+KNLR+CGDCH K I+ + R IV+RD R+HHF+DG CSC DYW
Sbjct: 791 GLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 17/363 (4%)
Query: 1 MYVKFNLLEEAQVVFDEM---PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+Y K +A+ VF+ M +R+VVSW+ M++ Y + A+K+ V L G++PN
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 58 MFTFSSVLRAC---EYLSDIKQIHSSILKVG-LESDVFVRSALIDVYSKLGELLE-ALSV 112
+ +++V+RAC +++ + ++K G ESDV V +LID++ K E A V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F +M + V W +I Q EA+ + M +GF +D+ TL+SV AC + L
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 173 ELGRQAHVHVLKFDQDLILHNALLDMYCKC---GSLEDAKFIFNRMVVKDVISWSTMIAG 229
LG+Q H ++ + +L+DMY KC GS++D + +F+RM V+SW+ +I G
Sbjct: 286 SLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 230 LAQN-GFSLEALKLFDSMKVMG-PRPNYITILGVLFACSHAGLVDDGWHYF-RSMKNLYG 286
+N + EA+ LF M G PN+ T AC + G ++ K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR--G 403
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAA 346
+ ++ + ++ +++D + ++ K ++V++ T LD + N + A
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 347 KEI 349
EI
Sbjct: 463 SEI 465
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 15/347 (4%)
Query: 1 MYVKF-NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
M+VK N E A VFD+M E NVV+WT MI+ + A++ + M+ G + F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKL---GELLEALSVF 113
T SSV AC L ++ KQ+HS ++ GL D V +L+D+Y+K G + + VF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 114 KEMVTGDRVVWNSIIAAFAQHSD-GDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSL 171
M + W ++I + ++ + EA+ L+ +M G + T +S +AC +S
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 172 LELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
+G+Q K + + N+++ M+ K +EDA+ F + K+++S++T + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+N +A KL + + T +L ++ G + G + L G+
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSC 507
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ ++ + + G +D ++ + M + +V++W +++ H
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMITGFAKH 553
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 46/331 (13%)
Query: 42 AMKLLVFMLREGVMP-NMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALI 97
A+ L M R+G+ P + TFSS+L++C D K +H+ +++ +E D + ++LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 98 DVYSKLGELLEALSVFKEMV---TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPA 154
+YSK G+ +A VF+ M D V W++++A + + +A+ ++ + G
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMYCKC-GSLEDAKF 210
+ T+V+RAC+ + +GR ++K F+ D+ + +L+DM+ K S E+A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH--- 267
+F++M +V++W+ MI Q GF EA++ F M + G + T+ V AC+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 268 -------------AGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLI 314
+GLVDD S+ ++Y C D G +DD K+
Sbjct: 285 LSLGKQLHSWAIRSGLVDD---VECSLVDMYA--------KCSAD-----GSVDDCRKVF 328
Query: 315 HEMNCKPDVVTWRTLLDACRAHRNVDLATYA 345
M V++W L+ +N +LAT A
Sbjct: 329 DRME-DHSVMSWTALITG--YMKNCNLATEA 356
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/533 (40%), Positives = 320/533 (60%), Gaps = 37/533 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L EA++V DEM R+VVSW +++ Y+ + D A+++ M + + T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+S+L A + E+ ++V+ D++ K+G+ K +V+
Sbjct: 244 MASLLPA-------------VSNTTTENVMYVK----DMFFKMGK--------KSLVS-- 276
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
WN +I + +++ EA+ LY +M GF D ++TSVL AC S L LG++ H
Sbjct: 277 ---WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 181 HV--LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
++ K +L+L NAL+DMY KCG LE A+ +F M +DV+SW+ MI+ +G +
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
A+ LF ++ G P+ I + L ACSHAGL+++G F+ M + Y I P EH CM+
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG 358
DLLGRAGK+ + + I +M+ +P+ W LL ACR H + D+ AA ++ +L E +G
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
YVLLSN YA + W +V +R M+ KG++K PG S +EV++ IH F++GD+SHPQ DE
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDE 573
Query: 419 ISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK--- 475
I R+L+ + ++ GYVPD+ L D+E E +E L HSEKLAIVF +M+ +E+
Sbjct: 574 IYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDS 633
Query: 476 --TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
TIR+ KNLRICGDCH+ AKLI+++ R I+IRD R+H FR GVCSCGDYW
Sbjct: 634 NNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 40/336 (11%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + A+ VFDE+PERNV+ MI +Y + +K+ M V P+ +TF
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
VL+AC I ++IH S KVGL S +FV + L+ +Y K G L EA V EM
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V WNS++ +AQ+ D+AL + ++M D T+ S+L A + + +
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV---- 259
Query: 179 HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
MY K +F +M K ++SW+ MI +N +E
Sbjct: 260 -------------------MY--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPGREHYGC 296
A++L+ M+ G P+ ++I VL AC + G H + K L P
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENA 349
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D+ + G L+ + M + DVV+W ++ A
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 8/282 (2%)
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+F VL + ++ +HS I+ L + + L+ Y+ L ++ A VF E+
Sbjct: 41 TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ ++ N +I ++ + E + ++ M D T VL+AC+ + +GR
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H K L + N L+ MY KCG L +A+ + + M +DV+SW++++ G AQN
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+AL++ M+ + + T+ +L A S+ + Y + M G +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSW 277
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNC---KPDVVTWRTLLDAC 333
M+ + + + V+L M +PD V+ ++L AC
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 325/547 (59%), Gaps = 24/547 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
MY + + VFD M +R + W MI+ YS + + A+ L + M G++ N
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T + V+ AC S + IH ++K GL+ D FV++ L+D+YS+LG++ A+ +F +M
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-----------RAGFPADQSTLTSVLRA 165
D V WN++I + ++AL L KM+ R + TL ++L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 166 CTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISW 223
C +S L G++ H + +K + D+ + +AL+DMY KCG L+ ++ +F+++ K+VI+W
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 224 STMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN 283
+ +I +G EA+ L M V G +PN +T + V ACSH+G+VD+G F MK
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP----DVVTWRTLLDACRAHRNV 339
YG++P +HY C++DLLGRAG++ + +L MN P W +LL A R H N+
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 340 DLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
++ AA+ +++L+ YVLL+N Y+++ +W+ EVRR M+ +G+RKEPGCSWIE
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
Query: 400 DKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHS 459
++H F+ GD SHPQ +++S L R+ GYVPDT+ VL ++E +++E L HS
Sbjct: 764 GDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHS 823
Query: 460 EKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGV 519
EKLAI FGI++ IRV KNLR+C DCH+ K I+K+ R I++RD R+H F++G
Sbjct: 824 EKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGT 883
Query: 520 CSCGDYW 526
CSCGDYW
Sbjct: 884 CSCGDYW 890
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 178/329 (54%), Gaps = 17/329 (5%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC----- 68
VFD + ERN VSW ++IS+ S + + A++ ML E V P+ FT SV+ AC
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 69 -EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
E L KQ+H+ L+ G E + F+ + L+ +Y KLG+L + + D V WN++
Sbjct: 215 PEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--- 184
+++ Q+ EAL ++M G D+ T++SVL AC+ + +L G++ H + LK
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
D++ + +AL+DMYC C + + +F+ M + + W+ MIAG +QN EAL LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 245 SM-KVMGPRPNYITILGVLFACSHAGLVD--DGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
M + G N T+ GV+ AC +G + H F + G+D R ++D+
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR---GLDRDRFVQNTLMDMY 450
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
R GK+D +++ +M + D+VTW T++
Sbjct: 451 SRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 22/357 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L ++V+ R++V+W T++S+ + A++ L M+ EGV P+ FT
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEM 116
SSVL AC +L + K++H+ LK G L+ + FV SAL+D+Y ++L VF M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR-AGFPADQSTLTSVLRACTGMSLLELG 175
+WN++IA ++Q+ EAL L+ M AG A+ +T+ V+ AC
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
H V+K D+D + N L+DMY + G ++ A IF +M +D+++W+TMI G +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 234 GFSLEALKLFDSMKVM-----------GPRPNYITILGVLFACSHAGLVDDGWH-YFRSM 281
+AL L M+ + +PN IT++ +L +C+ + G + ++
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 282 KNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRN 338
KN D ++D+ + G L M + + + + +V+TW ++ A H N
Sbjct: 545 KNNLATDVAVG--SALVDMYAKCGCL-QMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 8/257 (3%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSIL 82
W ++ + L A+ V M+ G+ P+ + F ++L+A L D+ KQIH+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 83 KVGLESD-VFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
K G D V V + L+++Y K G+ VF + ++V WNS+I++ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSLLE---LGRQAHVHVL-KFDQDLILHNALLD 197
++ M TL SV+ AC+ + + E +G+Q H + L K + + + N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
MY K G L +K + +D+++W+T+++ L QN LEAL+ M + G P+ T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 258 ILGVLFACSHAGLVDDG 274
I VL ACSH ++ G
Sbjct: 305 ISSVLPACSHLEMLRTG 321
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 322/524 (61%), Gaps = 11/524 (2%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
++EA+ +FDEM ER+V++WTTM++ Y D A K+ VMP S
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSML 241
Query: 68 CEYLSDIK-QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
Y+ + + + + +V V +A+I + GE+ +A VF M + W +
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
+I ++ EAL L+ M++ G TL S+L C ++ L G+Q H +++
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
FD D+ + + L+ MY KCG L +K IF+R KD+I W+++I+G A +G EALK+F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 245 SMKVMGP-RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
M + G +PN +T + L ACS+AG+V++G + SM++++G+ P HY CM+D+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLL 363
AG+ ++ +++I M +PD W +LL ACR H +D+A + AK++++++ E++G Y+LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 364 SNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD-KSHPQIDEISRQ 422
SN YA+ W DVAE+R+ M+ + +RK PGCSW EV+ ++HAF G SHP+ + I +
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L++ L AGY PD ++ L D++ E++ +SL++HSE+LA+ + ++ + IRV KN
Sbjct: 602 LDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKN 661
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LR+C DCH K+I+K+++R I++RD R+HHFR+G CSC DYW
Sbjct: 662 LRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 21/270 (7%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K ++EA+ VFD MPERNVVSWT ++ Y D A L MP
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF------WKMPEKNKV 142
Query: 62 SSVLRACEYLSDIKQIHSSIL-KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
S + +L D + + L ++ + D R+++I K G + EA +F EM
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
+ W +++ + Q++ D+A ++ M + + TS+L M ++ GR
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSML-----MGYVQNGRIEDA 253
Query: 181 HVLKFD----QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
L F+ + +I NA++ + G + A+ +F+ M ++ SW T+I +NGF
Sbjct: 254 EEL-FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFE 312
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACS 266
LEAL LF M+ G RP + T++ +L C+
Sbjct: 313 LEALDLFILMQKQGVRPTFPTLISILSVCA 342
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 62/328 (18%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+ EA+ +FD +++ SW +M++ Y + + A KL MP+
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF------DEMPD---------- 76
Query: 68 CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
++ + L+ Y K GE+ EA VF M + V W ++
Sbjct: 77 --------------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTAL 116
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR---QAHVHVLK 184
+ + + D A L+ KM P +V+ + L+ GR ++ +
Sbjct: 117 VKGYVHNGKVDVAESLFWKM-----PEKNKVSWTVML----IGFLQDGRIDDACKLYEMI 167
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
D+D I +++ CK G +++A+ IF+ M + VI+W+TM+ G QN +A K+FD
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC--MLDLLG 302
M P ++ +L G ++D F M P + C M+ LG
Sbjct: 228 VM----PEKTEVSWTSMLMGYVQNGRIEDAEELFEVM-------PVKPVIACNAMISGLG 276
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ G++ ++ M + D +W+T++
Sbjct: 277 QKGEIAKARRVFDSMKERND-ASWQTVI 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
MY+K L +++++FD P ++++ W ++IS Y+S L + A+K+ M G PN
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKE 115
TF + L AC Y +++ I+ S+ V G++ + ++D+ + G EA+ +
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 116 M-VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
M V D VW S++ A HS D A + KK+
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D+++I N L+ Y K G +++A+ +F+ M ++V+SW+ ++ G NG A LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG--CMLDLLGR 303
M P N ++ +L G +DD LY + P +++ M+ L +
Sbjct: 136 M----PEKNKVSWTVMLIGFLQDGRIDDAC-------KLYEMIPDKDNIARTSMIHGLCK 184
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG-AYVL 362
G++D+ ++ EM+ + V+TW T++ + VD A++I + E T ++
Sbjct: 185 EGRVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRVD----DARKIFDVMPEKTEVSWTS 239
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGI 388
+ Y + D E+ M VK +
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPVKPV 265
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 308/531 (58%), Gaps = 6/531 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YV+ L A+ VFDEMP+R + +W MI+ + N+ + L M G P+ +T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SV L + +QIH +K GLE D+ V S+L +Y + G+L + V + M
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 154
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V WN++I AQ+ + LYLYK M+ +G ++ T +VL +C+ +++ G+Q
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 214
Query: 179 HVHVLKFDQDLILHNA--LLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K ++ L+ MY KCG L DA F+ +D + WS+MI+ +G
Sbjct: 215 HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQG 274
Query: 237 LEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EA++LF++M + N + L +L+ACSH+GL D G F M YG PG +HY
Sbjct: 275 DEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYT 334
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DLLGRAG LD +I M K D+V W+TLL AC H+N ++A KEIL++D
Sbjct: 335 CVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPN 394
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D+ YVLL+N +A++K W DV+EVR++MR K ++KE G SW E ++H F +GD+S +
Sbjct: 395 DSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSK 454
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
EI L + + GY PDT VL D++ E++E L HSEKLA+ F +M P+
Sbjct: 455 SKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGA 514
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IR+ KNLR+C DCH+ K I+ ++ R I +RD R+HHF +G CSCGDYW
Sbjct: 515 PIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 96 LIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPAD 155
LI+ Y + G+L+ A VF EM WN++IA Q +E L L+++M GF D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFN 213
+ TL SV G+ + +G+Q H + +K+ + DL+++++L MY + G L+D + +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDD 273
M V+++++W+T+I G AQNG L L+ MK+ G RPN IT + VL +CS +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 274 GWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
G + G ++ + + G L D K E D V W +++ A
Sbjct: 211 GQQIHAEAIKI-GASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAY 268
Query: 334 RAHRNVDLATYAAKEILKLDAEDT 357
H D A E+ AE T
Sbjct: 269 GFHGQGDEAI----ELFNTMAEQT 288
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY++ L++ ++V MP RN+V+W T+I + + + L M G PN T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 61 FSSVLRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F +VL +C L+ +QIH+ +K+G S V V S+LI +YSK G L +A F E
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V+W+S+I+A+ H GDEA+ L+ M + ++ ++L AC+ L + G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 177 QAH---VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
+ V F L + ++D+ + G L+ A+ I M +K D++ W T+++
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITIL 259
+ + A ++F + + P + +L
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDSACYVL 401
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPR 252
N L++ Y + G L +A+ +F+ M + + +W+ MIAGL Q F+ E L LF M +G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 253 PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL---------GR 303
P+ T LG +F+ S AGL RS+ I YG LDL+ R
Sbjct: 89 PDEYT-LGSVFSGS-AGL--------RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLL 330
GKL D +I M + ++V W TL+
Sbjct: 139 NGKLQDGEIVIRSMPVR-NLVAWNTLI 164
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 324/557 (58%), Gaps = 38/557 (6%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L+ A VF + E++VVSW +MI+ + D+A++L M E V + T VL A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 68 CEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C + ++ +Q+ S I + + ++ + +A++D+Y+K G + +A +F M D V W
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 125 -------------------------------NSIIAAFAQHSDGDEALYLYKKMR-RAGF 152
N++I+A+ Q+ +EAL ++ +++ +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 153 PADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKF 210
+Q TL S L AC + LELGR H ++ K + H +AL+ MY KCG LE ++
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
+FN + +DV WS MI GLA +G EA+ +F M+ +PN +T V ACSH GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
VD+ F M++ YGI P +HY C++D+LGR+G L+ VK I M P W LL
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
AC+ H N++LA A +L+L+ + GA+VLLSN YA W +V+E+R+ MRV G++K
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 391 EPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQ 450
EPGCS IE+D IH F+ GD +HP +++ +L++ + +L GY P+ + VLQ +E E+
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
Query: 451 -REDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDP 509
+E SL HSEKLAI +G++S K IRV KNLR+CGDCH AKLI++L R I++RD
Sbjct: 662 MKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDR 721
Query: 510 IRYHHFRDGVCSCGDYW 526
R+HHFR+G CSC D+W
Sbjct: 722 YRFHHFRNGQCSCNDFW 738
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 182/372 (48%), Gaps = 44/372 (11%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREG-VMPNMFTF 61
F LE A+ VFDE+P+ N +W T+I AY+S D + + F M+ E PN +TF
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+++A +S + + +H +K + SDVFV ++LI Y G+L A VF +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ- 177
D V WNS+I F Q D+AL L+KKM A T+ VL AC + LE GRQ
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 178 -AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA----- 231
+++ + + +L L NA+LDMY KCGS+EDAK +F+ M KD ++W+TM+ G A
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 232 --------------------------QNGFSLEALKLFDSMKVM-GPRPNYITILGVLFA 264
QNG EAL +F +++ + N IT++ L A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
C+ G ++ G + S +GI ++ + + G L+ ++ + + K DV
Sbjct: 375 CAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVF 432
Query: 325 TWRTLLDACRAH 336
W ++ H
Sbjct: 433 VWSAMIGGLAMH 444
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 175/364 (48%), Gaps = 26/364 (7%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSAL--IDVYSKLGELLEALSVFKEMVTGD 120
S++ C L +KQ H +++ G SD + S L + S L A VF E+ +
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
WN++I A+A D +++ + M +P ++ T +++A +S L LG+
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP-NKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K D+ + N+L+ Y CG L+ A +F + KDV+SW++MI G Q G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
+AL+LF M+ + +++T++GVL AC+ ++ G ++ ++
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTLANA 272
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK-LDAE 355
MLD+ + G ++D +L M K D VTW T+LD + + AA+E+L + +
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYE----AAREVLNSMPQK 327
Query: 356 DTGAYVLLSNTYANSKMWNDV------AEVRRTMRVKGI---RKEPGCSWI---EVDKQI 403
D A+ L + Y + N+ ++++ M++ I C+ + E+ + I
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 404 HAFI 407
H++I
Sbjct: 388 HSYI 391
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LE+++ VF+ + +R+V W+ MI + + A+ + M V PN T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F++V AC + + + H G+ + + ++DV + G L +A+ + M
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 117 -VTGDRVVWNSIIAAFAQHSD 136
+ VW +++ A H++
Sbjct: 529 PIPPSTSVWGALLGACKIHAN 549
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 327/590 (55%), Gaps = 70/590 (11%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSS----------VKLNDRAMKLLVF------- 48
+LL A+ VFDE+ E++ SWTTM++ Y ++ D MKL+ +
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 49 ---------------MLREGVMPNMFTFSSVLRACE---YLSDIKQIHSSILKVGLESDV 90
M+ G+ + FT+ SV+RAC L KQ+H+ +L+ S
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 91 FVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAF------------------- 131
F S L+ +Y K G+ EA ++F++M D V WN++++ +
Sbjct: 322 FDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 132 ------------AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
A++ G+E L L+ M+R GF + +++C + G+Q H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
+LK FD L NAL+ MY KCG +E+A+ +F M D +SW+ +IA L Q+G
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
EA+ +++ M G RP+ IT+L VL ACSHAGLVD G YF SM+ +Y I PG +HY +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
+DLL R+GK D +I + KP W LL CR H N++L AA ++ L E
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQID 417
G Y+LLSN +A + W +VA VR+ MR +G++KE CSWIE++ Q+H F++ D SHP+ +
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 418 EISRQLNQFISRLTGAGYVPDTNFVLQDLEGE-QREDSLRHHSEKLAIVFGIMSFPKEKT 476
+ L + GYVPDT+FVL D+E + +ED L HSEK+A+ FG+M P T
Sbjct: 681 AVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTT 740
Query: 477 IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IR++KNLR CGDCH F + ++ + QR I++RD R+HHFR+G CSCG++W
Sbjct: 741 IRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 181/415 (43%), Gaps = 76/415 (18%)
Query: 11 AQVVFDEMP--ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC 68
A+ VF++ P R+ V + MI+ +S A+ L M EG P+ FTF+SVL
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL 158
Query: 69 EYLSDIK----QIHSSILKVGLESDVFVRSALIDVYSKLGE----LLEALSVFKEMVTGD 120
++D + Q H++ LK G V +AL+ VYSK L A VF E++ D
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 121 R--------------------------------VVWNSIIAAFAQHSDGDEALYLYKKMR 148
V +N++I+ + EAL + ++M
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL---------------------KFDQ 187
+G D+ T SV+RAC LL+LG+Q H +VL KFD+
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 188 -----------DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
DL+ NALL Y G + +AK IF M K+++SW MI+GLA+NGF
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
E LKLF MK G P G + +C+ G +G Y + + G D
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNA 457
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
++ + + G +++ ++ M C D V+W L+ A H + A +E+LK
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YV + EA+++F EM E+N++SW MIS + + +KL M REG P + F
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 62 SSVLRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S +++C L + +Q H+ +LK+G +S + +ALI +Y+K G + EA VF+ M
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ- 177
D V WN++IAA QH G EA+ +Y++M + G D+ TL +VL AC+ L++ GR+
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 178 --AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIAGLAQNG 234
+ V + + L+D+ C+ G DA+ + + K W +++G +G
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 145/355 (40%), Gaps = 91/355 (25%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE-----------MVTG---- 119
+ +H +I+ G + + + LIDVY K EL A +F E MV+G
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 120 ------------------DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTS 161
D V++N++I F+ ++DG A+ L+ KM+ GF D T S
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 162 VLRACTGMSLLELGR----QAHVHVLKFDQDLI--LHNALLDMYCKCGS----LEDAKFI 211
VL G++L+ Q H LK I + NAL+ +Y KC S L A+ +
Sbjct: 154 VL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 212 FNRMVVKDVISWSTMIAGLAQN--------------------------------GFSLEA 239
F+ ++ KD SW+TM+ G +N GF EA
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L++ M G + T V+ AC+ AGL+ G K ++ RE + D
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-------KQVHAYVLRREDFSFHFD 323
Query: 300 -----LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
L + GK D+ + +M K D+V+W LL + ++ A KE+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++EEA+ VF MP + VSW +I+A A+ + ML++G+ P+ T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 61 FSSVLRACEYLSDIKQIH------SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+VL AC + + Q ++ ++ +D + R LID+ + G+ +A SV +
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSDAESVIE 578
Query: 115 EMVTGDRV-VWNSIIAAFAQHSD 136
+ +W ++++ H +
Sbjct: 579 SLPFKPTAEIWEALLSGCRVHGN 601
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/531 (38%), Positives = 318/531 (59%), Gaps = 6/531 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFT 60
Y + LLEEA+ +FDEM E++ SWT M++ Y + A+ L M R PN+FT
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S + A + I K+IH I++ GL+SD + S+L+D+Y K G + EA ++F ++V
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W S+I + + S E L+ ++ + ++ T VL AC ++ ELG+Q
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++ + FD ++L+DMY KCG++E AK + + D++SW+++I G AQNG
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQ 400
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EALK FD + G +P+++T + VL AC+HAGLV+ G +F S+ + + +HY
Sbjct: 401 PDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DLL R+G+ + + +I EM KP W ++L C + N+DLA AA+E+ K++ E
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE 520
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ YV ++N YA + W + ++R+ M+ G+ K PG SW E+ ++ H FI D SHP
Sbjct: 521 NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPM 580
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
++I L + ++ GYVP T+ VL D+E EQ+E++L +HSEKLA+ F I+S +
Sbjct: 581 YNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGT 640
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I+V+KNLR C DCH K I+ + +R I +RD R+H F +G CSCGDYW
Sbjct: 641 AIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 166/344 (48%), Gaps = 16/344 (4%)
Query: 7 LLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
LL EA + + ++ +I S + + K+ + G +P + ++ +LR
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 67 ---ACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
C L D +++ + D+ + +++ Y+++G L EA +F EM D
Sbjct: 129 MYAKCGSLVDARKVFDEMPN----RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV---LRACTGMSLLELGRQAHV 180
W +++ + + +EAL LY M+R P + + +V + A + + G++ H
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRV--PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 181 HVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
H+++ D D +L ++L+DMY KCG +++A+ IF+++V KDV+SW++MI ++ E
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
LF + RPN T GVL AC+ + G M + G DP ++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLV 361
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
D+ + G ++ K + + KPD+V+W +L+ C + D A
Sbjct: 362 DMYTKCGNIES-AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 11/243 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++EA+ +FD++ E++VVSWT+MI Y L ++ PN +T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ VL AC L+ KQ+H + +VG + F S+L+D+Y+K G + A V
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W S+I AQ+ DEAL + + ++G D T +VL ACT L+E G +
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 178 -----AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLA 231
H L D + L+D+ + G E K + + M +K W++++ G +
Sbjct: 442 FFYSITEKHRLSHTSD--HYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 232 QNG 234
G
Sbjct: 500 TYG 502
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E A+ V D P+ ++VSWT++I + D A+K +L+ G P+ T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLE--------------SDVFVRSALIDVYSKLGEL 106
F +VL AC H+ +++ GLE SD + + L+D+ ++ G
Sbjct: 423 FVNVLSAC--------THAGLVEKGLEFFYSITEKHRLSHTSDHY--TCLVDLLARSGRF 472
Query: 107 LEALSVFKEM-VTGDRVVWNSIIAAFAQHSDGDEA 140
+ SV EM + + +W S++ + + + D A
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/524 (41%), Positives = 307/524 (58%), Gaps = 9/524 (1%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A+ VFDEM + + W T+ Y +L ++ L M GV P+ FT+ V++A
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 71 LSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
L D +H+ ++K G V + L+ +Y K GEL A +F+ M D V WN+
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--F 185
+A Q + AL + KM D T+ S+L AC + LE+G + + K
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D ++I+ NA LDM+ KCG+ E A+ +F M ++V+SWSTMI G A NG S EAL LF +
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM--KNLYGIDPGREHYGCMLDLLGR 303
M+ G RPNY+T LGVL ACSHAGLV++G YF M N ++P +EHY CM+DLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY-VL 362
+G L++ + I +M +PD W LL AC HR++ L A ++L A D G+Y VL
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVA-DVLVETAPDIGSYHVL 420
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
LSN YA + W+ V +VR MR G +K S +E + +IH F GDKSHPQ I +
Sbjct: 421 LSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEK 480
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L++ + ++ GYVPDT V D+E E++E SL HHSEKLAI FG++ IRV KN
Sbjct: 481 LDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKN 540
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LR C DCH F+K ++ L I++RD R+HHFR+GVCSC ++W
Sbjct: 541 LRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 7/274 (2%)
Query: 61 FSSVLRACEY-LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
S +LRA +K+IH+ +L+ G + + L++ +G++ A VF EM
Sbjct: 13 LSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP 72
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+WN++ + ++ E+L LYKKMR G D+ T V++A + + G H
Sbjct: 73 RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALH 132
Query: 180 VHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
HV+K+ I+ L+ MY K G L A+F+F M VKD+++W+ +A Q G S
Sbjct: 133 AHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSA 192
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGC 296
AL+ F+ M + + T++ +L AC G ++ G Y R+ K ID
Sbjct: 193 IALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE--EIDCNIIVENA 250
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
LD+ + G + L EM + +VV+W T++
Sbjct: 251 RLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMI 283
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNM 58
MY+KF L A+ +F+ M +++V+W ++ V+ + A+ L F M + V +
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAV--CVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
FT S+L AC L + ++I+ K ++ ++ V +A +D++ K G A +F+E
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M + V W+++I +A + D EAL L+ M+ G + T VL AC+ L+ G
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 176 -RQAHVHVLKFDQDLIL----HNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAG 229
R + V D++L + ++D+ + G LE+A +FI V D W ++
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Query: 230 LA 231
A
Sbjct: 391 CA 392
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M++K E A+V+F+EM +RNVVSW+TMI Y+ + A+ L M EG+ PN T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 61 FSSVLRACEY---LSDIKQIHSSILKV---GLESDVFVRSALIDVYSKLGELLEALSVFK 114
F VL AC + +++ K+ S +++ LE + ++D+ + G L EA K
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 115 EM-VTGDRVVWNSIIAAFAQHSD 136
+M V D +W +++ A A H D
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRD 396
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 315/524 (60%), Gaps = 5/524 (0%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L +A +FDE+P+R+VV+WT + S Y++ + A+ L M+ GV P+ + VL A
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 68 CEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C ++ D+ I + ++ ++ + FVR+ L+++Y+K G++ +A SVF MV D V W
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ--AHVHV 182
+++I +A +S E + L+ +M + DQ ++ L +C + L+LG + +
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 183 LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
+F +L + NAL+DMY KCG++ +F M KD++ + I+GLA+NG + +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
F + +G P+ T LG+L C HAGL+ DG +F ++ +Y + EHYGCM+DL G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVL 362
RAG LDD +LI +M +P+ + W LL CR ++ LA KE++ L+ + G YV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
LSN Y+ W++ AEVR M KG++K PG SWIE++ ++H F+ DKSHP D+I +
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAK 581
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L + + G+VP T FV D+E E++E L +HSEKLA+ G++S + IRV KN
Sbjct: 582 LEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKN 641
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LR+CGDCH KLI+K+ +R IV+RD R+H F +G CSC DYW
Sbjct: 642 LRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 25/374 (6%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
F + + ++F N+ + ++I+ + + L + L + + + G+ + FTF V
Sbjct: 58 FRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLV 117
Query: 65 LRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
L+AC S K +HS ++K G DV ++L+ +YS G L +A +F E+
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR--QAH 179
V W ++ + + EA+ L+KKM G D + VL AC + L+ G +
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
+ ++ ++ + L+++Y KCG +E A+ +F+ MV KD+++WSTMI G A N F E
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG-W-------HYFRSMKNLYGIDPGR 291
++LF M +P+ +I+G L +C+ G +D G W H F + NL+ +
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF--LTNLFMANA-- 353
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD--ACRAHRNVDLATYAAKEI 349
++D+ + G + ++ EM K D+V + A H + A + E
Sbjct: 354 -----LIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Query: 350 LKLDAEDTGAYVLL 363
L + + + LL
Sbjct: 408 LGISPDGSTFLGLL 421
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 125/236 (52%), Gaps = 7/236 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K +E+A+ VFD M E+++V+W+TMI Y+S ++L + ML+E + P+ F+
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 61 FSSVLRACEYLS--DIKQIHSSIL-KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
L +C L D+ + S++ + +++F+ +ALID+Y+K G + VFKEM
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V+ N+ I+ A++ + ++ + + G D ST +L C L++ G +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Query: 178 ---AHVHVLKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAG 229
A V + + + ++D++ + G L+DA + I + + + I W +++G
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 5/268 (1%)
Query: 67 ACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
AC ++ +KQIH S++ L D F+ + L+ + + +F + ++NS
Sbjct: 23 ACT-VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNS 81
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
+I F + E L L+ +R+ G T VL+ACT S +LG H V+K
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
F+ D+ +LL +Y G L DA +F+ + + V++W+ + +G +G EA+ LF
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
M MG +P+ I+ VL AC H G +D G + M+ + + +++L +
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVRTTLVNLYAKC 260
Query: 305 GKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
GK++ + M + D+VTW T++
Sbjct: 261 GKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 324/522 (62%), Gaps = 6/522 (1%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC-- 68
A+ +F+ M E ++V + +M YS L V +L +G++P+ +TF S+L+AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 69 -EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+ L + +Q+H +K+GL+ +V+V LI++Y++ ++ A VF +V V +N++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--F 185
I +A+ + +EAL L+++M+ ++ TL SVL +C + L+LG+ H + K F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
+ + ++ AL+DM+ KCGSL+DA IF +M KD +WS MI A +G + +++ +F+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
M+ +P+ IT LG+L ACSH G V++G YF M + +GI P +HYG M+DLL RAG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSN 365
L+D + I ++ P + WR LL AC +H N+DLA ++ I +LD G YV+LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 366 TYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQ 425
YA +K W V +R+ M+ + K PGCS IEV+ +H F GD ++ R L++
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 426 FISRLTGAGYVPDTNFVLQ-DLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLR 484
+ L +GYVPDT+ V+ ++ +++E +LR+HSEKLAI FG+++ P TIRV KNLR
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 485 ICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+C DCH AKLI+ + R +V+RD R+HHF DG CSCGD+W
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 7/241 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + ++ A+ VFD + E VV + MI+ Y+ + A+ L M + + PN T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SVL +C L + K IH K V V +ALID+++K G L +A+S+F++M
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D W+++I A+A H ++++ ++++MR D+ T +L AC+ +E GR+
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 178 AHVH-VLKFD--QDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQN 233
V KF + + +++D+ + G+LEDA +FI + + W ++A + +
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Query: 234 G 234
Sbjct: 413 N 413
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M+ K L++A +F++M ++ +W+ MI AY++ +++M + M E V P+ T
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 61 FSSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +L AC + + K + K G+ + +++D+ S+ G L +A ++
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEA 140
++ ++W ++AA + H++ D A
Sbjct: 394 PISPTPMLWRILLAACSSHNNLDLA 418
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/528 (37%), Positives = 312/528 (59%), Gaps = 2/528 (0%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K ++ +F E + ++V++ MI Y+S + ++ L ++ G T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
S++ +L I IH LK S V +AL VYSKL E+ A +F E
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH- 179
WN++I+ + Q+ ++A+ L+++M+++ F + T+T +L AC + L LG+ H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 180 -VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
V F+ + + AL+ MY KCGS+ +A+ +F+ M K+ ++W+TMI+G +G E
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
AL +F M G P +T L VL+ACSHAGLV +G F SM + YG +P +HY CM+
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMV 564
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG 358
D+LGRAG L ++ I M+ +P W TLL ACR H++ +LA ++++ +LD ++ G
Sbjct: 565 DILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVG 624
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
+VLLSN ++ + + A VR+T + + + K PG + IE+ + H F GD+SHPQ+ E
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKE 684
Query: 419 ISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIR 478
I +L + ++ AGY P+T L D+E E+RE ++ HSE+LAI FG+++ IR
Sbjct: 685 IYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744
Query: 479 VWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ KNLR+C DCH KLI+K+ +R IV+RD R+HHF+DGVCSCGDYW
Sbjct: 745 IIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMF 59
MY KF +E+A+ VFD MPE++ + W TMIS Y ++ ++++ ++ E +
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T +L A L +++ QIHS K G S +V + I +YSK G++ ++F+E
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V +N++I + + + + +L L+K++ +G STL S++ + L+
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---Y 339
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H + LK F + AL +Y K +E A+ +F+ K + SW+ MI+G QNG
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A+ LF M+ PN +TI +L AC+ G + G + + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVS 458
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++ + + G + + +L M K + VTW T++ H
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 10/297 (3%)
Query: 60 TFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
T+ + +S + Q H+ I+ G +D+ + + L S LG + A +F +
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGRQA 178
D ++N ++ F+ + +L ++ +R++ + ST + A +G GR
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 179 HVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + D +L+L + ++ MY K +EDA+ +F+RM KD I W+TMI+G +N
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 237 LEALKLF-DSMKVMGPRPNYITILGVLFACSHAGLVDDGW--HYFRSMKNLYGIDPGREH 293
+E++++F D + R + T+L +L A + + G H + Y D
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
+ + L + GK+ L E KPD+V + ++ ++ +L+ KE++
Sbjct: 262 F---ISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 325/574 (56%), Gaps = 57/574 (9%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF---MLREGVMPNMFTFSSV 64
L+ A +F++MP+RN SW T+I +S + + + +F M E V PN FTF SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 65 LRACEYLSDI---KQIHSSILKVGLESDVFVRSAL------------------------- 96
L+AC I KQIH LK G D FV S L
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 97 --------------------IDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
ID Y +LG+ A +F +M V WN++I+ ++ +
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 137 GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV----LKFDQDLILH 192
+A+ ++++M++ + TL SVL A + + LELG H++ ++ D +L
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD--VLG 312
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPR 252
+AL+DMY KCG +E A +F R+ ++VI+WS MI G A +G + +A+ F M+ G R
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 253 PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVK 312
P+ + + +L ACSH GLV++G YF M ++ G++P EHYGCM+DLLGR+G LD+ +
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 313 LIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKM 372
I M KPD V W+ LL ACR NV++ A ++ + D+GAYV LSN YA+
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 373 WNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTG 432
W++V+E+R M+ K IRK+PGCS I++D +H F++ D SHP+ EI+ L + +L
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
Query: 433 AGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIF 492
AGY P T VL +LE E +E+ L +HSEK+A FG++S K IR+ KNLRIC DCH
Sbjct: 553 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 612
Query: 493 AKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KLI+K+ +R I +RD R+HHF+DG CSC DYW
Sbjct: 613 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ + A+++FD+M +R+VVSW TMIS YS A+++ M + + PN T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SVL A L ++ +H G+ D + SALID+YSK G + +A+ VF+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ + W+++I FA H +A+ + KMR+AG ++L AC+ L+E GR+
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 179 HVHVLKFD--QDLILH-NALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQNG 234
++ D + I H ++D+ + G L++A +FI N + D + W ++ G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 72/334 (21%)
Query: 65 LRACEYLSDIKQIHSSILKVGLESDVFVRSALI------DVYSKLGELLEALSVFKEMVT 118
+ C + D+ QIH+ +K G D + ++ D++ + +L A +F +M
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQ 87
Query: 119 GDRVVWNSIIAAFAQHSDGDEAL----YLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
+ WN+II F++ SD D+AL Y+ M ++ T SVL+AC ++
Sbjct: 88 RNCFSWNTIIRGFSE-SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 175 GRQAHVHVLKF-----------------------------------------------DQ 187
G+Q H LK+ D
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+++L N ++D Y + G + A+ +F++M + V+SW+TMI+G + NGF +A+++F MK
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDG-WHYFRSMKNLYGIDPGRE----HYGCMLDLLG 302
RPNY+T++ VL A S G ++ G W + LY D G ++D+
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLH------LYAEDSGIRIDDVLGSALIDMYS 320
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ G ++ + + + + +V+TW +++ H
Sbjct: 321 KCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++E+A VF+ +P NV++W+ MI+ ++ A+ M + GV P+
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 61 FSSVLRACEY---LSDIKQIHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+ ++L AC + + + ++ S ++ V GLE + ++D+ + G L EA M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 117 -VTGDRVVWNSIIAA 130
+ D V+W +++ A
Sbjct: 438 PIKPDDVIWKALLGA 452
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 328/557 (58%), Gaps = 38/557 (6%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG--VMPNMFTFSSVL 65
L+ A + D + + + +MI A+ + +++ +L G + P+ +T + ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 66 RACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLG------------------ 104
+AC L + Q+H ++ G ++D V++ LI +Y++LG
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 105 -------------ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG 151
+++ A +F+ M D + WN++I+ +AQ + EAL ++ M+ G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 152 FPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLEDAK 209
+ + SVL ACT + L+ GR AH ++ K + L L+D+Y KCG +E A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 210 FIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
+F M K+V +WS+ + GLA NGF + L+LF MK G PN +T + VL CS G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 270 LVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL 329
VD+G +F SM+N +GI+P EHYGC++DL RAG+L+D V +I +M KP W +L
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 330 LDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
L A R ++N++L A+K++L+L+ + GAYVLLSN YA+S W++V+ VR++M+ KG+R
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 390 KEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGE 449
K+PGCS +EV+ ++H F +GDKSHP+ +I RL AGY DT V+ D++ E
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535
Query: 450 QREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDP 509
++ED+L HSEK AI FGIMS ++ IR+ KNLR+CGDCH + +I+K+ R I++RD
Sbjct: 536 EKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 595
Query: 510 IRYHHFRDGVCSCGDYW 526
R+HHF+DG CSC +W
Sbjct: 596 NRFHHFKDGHCSCNGFW 612
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K +E+A VF M E+NV +W++ ++ + ++ ++L M ++GV PN T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 61 FSSVLRACEYLS--DIKQIHSSILK--VGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F SVLR C + D Q H ++ G+E + L+D+Y++ G L +A+S+ ++M
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
+ VW+S++ A + + + + KKM
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELGVLASKKM 435
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 314/558 (56%), Gaps = 37/558 (6%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
+ L AQ+VFD + W MI +S +R++ L ML N +TF S+L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 66 RACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYS--------------------- 101
+AC LS + QIH+ I K+G E+DV+ ++LI+ Y+
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 102 ----------KLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG 151
K G++ AL++F++M + + W ++I+ + Q EAL L+ +M+ +
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 152 FPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAK 209
D +L + L AC + LE G+ H ++ K D +L L+DMY KCG +E+A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 210 FIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
+F + K V +W+ +I+G A +G EA+ F M+ MG +PN IT VL ACS+ G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 270 LVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL 329
LV++G F SM+ Y + P EHYGC++DLLGRAG LD+ + I EM KP+ V W L
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 330 LDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
L ACR H+N++L + ++ +D G YV +N +A K W+ AE RR M+ +G+
Sbjct: 423 LKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Query: 390 KEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDL-EG 448
K PGCS I ++ H F+ GD+SHP+I++I + +L GYVP+ +L DL +
Sbjct: 483 KVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDD 542
Query: 449 EQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRD 508
++RE + HSEKLAI +G++ IR+ KNLR+C DCH KLI+K+ +R IV+RD
Sbjct: 543 DEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRD 602
Query: 509 PIRYHHFRDGVCSCGDYW 526
R+HHFRDG CSCGDYW
Sbjct: 603 RTRFHHFRDGKCSCGDYW 620
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 9/234 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YVK ++ A +F +M E+N +SWTTMIS Y +N A++L M V P+ +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++ L AC L ++Q IHS + K + D + LID+Y+K GE+ EAL VFK +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
W ++I+ +A H G EA+ + +M++ G + T T+VL AC+ L+E G+
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 179 HVHVLKFDQDL---ILH-NALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMI 227
+ ++ D +L I H ++D+ + G L++AK M +K + + W ++
Sbjct: 371 -FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 42/318 (13%)
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALID--VYSKLGELLE-ALSVF 113
N++ S L+ C ++KQIH+ +LK GL D + + + + S + L A VF
Sbjct: 13 NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
D +WN +I F+ + + +L LY++M + P + T S+L+AC+ +S E
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 174 LGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNR----------------- 214
Q H + K ++ D+ N+L++ Y G+ + A +F+R
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 215 --------------MVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILG 260
M K+ ISW+TMI+G Q + EAL+LF M+ P+ +++
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 261 VLFACSHAGLVDDG-WHYFRSMKNLYGIDPGREHYGCML-DLLGRAGKLDDMVKLIHEMN 318
L AC+ G ++ G W + K +D GC+L D+ + G++++ +++ +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSV---LGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 319 CKPDVVTWRTLLDACRAH 336
K V W L+ H
Sbjct: 310 -KKSVQAWTALISGYAYH 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +EEA VF + +++V +WT +IS Y+ A+ + M + G+ PN+ T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSA------LIDVYSKLGELLEALSVFK 114
F++VL AC Y +++ ++ +E D ++ ++D+ + G L EA +
Sbjct: 351 FTAVLTACSYTGLVEE--GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 115 EM-VTGDRVVWNSIIAAFAQHSD 136
EM + + V+W +++ A H +
Sbjct: 409 EMPLKPNAVIWGALLKACRIHKN 431
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 320/531 (60%), Gaps = 6/531 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L AQ VF + + V SW +I ++ ++ + M G++P+ FT
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+L AC L + K++H I++ LE D+FV +++ +Y GEL ++F M
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V WN++I + Q+ D AL ++++M G ++ V AC+ + L LGR+A
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + LK + D + +L+DMY K GS+ + +FN + K SW+ MI G +G +
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
EA+KLF+ M+ G P+ +T LGVL AC+H+GL+ +G Y MK+ +G+ P +HY C
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 297 MLDLLGRAGKLDDMVKLI-HEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
++D+LGRAG+LD ++++ EM+ + DV W++LL +CR H+N+++ A ++ +L+ E
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
YVLLSN YA W DV +VR+ M +RK+ GCSWIE+++++ +F++G++
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDG 859
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
+EI + +++ GY PDT V DL E++ + LR HSEKLA+ +G++ +
Sbjct: 860 FEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGT 919
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
TIRV+KNLRIC DCH AKLI+K+ +R IV+RD R+HHF++GVCSCGDYW
Sbjct: 920 TIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 149/279 (53%), Gaps = 12/279 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
MY ++++ VFD + +N+ W +IS+YS +L D ++ + M+ ++P+ F
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ V++AC +SD+ +H ++K GL DVFV +AL+ Y G + +AL +F M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR----AGFPADQSTLTSVLRACTGMSLL 172
+ V WNS+I F+ + +E+ L +M F D +TL +VL C +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 173 ELGRQAHVHV--LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
LG+ H L+ D++L+L+NAL+DMY KCG + +A+ IF K+V+SW+TM+ G
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 231 AQNGFSLEALKLFDSMKVMGP--RPNYITILGVLFACSH 267
+ G + + M G + + +TIL + C H
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 11/276 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE----GVMPN 57
Y + +A +FD MPERN+VSW +MI +S ++ + LL M+ E MP+
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 58 MFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T +VL C +I K +H +K+ L+ ++ + +AL+D+YSK G + A +FK
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG--FPADQSTLTSVLRACTGMSLL 172
+ V WN+++ F+ D + ++M G AD+ T+ + + C S L
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
++ H + LK F + ++ NA + Y KCGSL A+ +F+ + K V SW+ +I G
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
AQ+ +L MK+ G P+ T+ +L ACS
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 134/277 (48%), Gaps = 17/277 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+ L Q +FD M ++++VSW T+I+ Y DRA+ + M+ G+ +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
V AC L + ++ H+ LK LE D F+ +LID+Y+K G + ++ VF +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
WN++I + H EA+ L+++M+R G D T VL AC L+ G +
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 719
Query: 178 AHVHVLK----FDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVK-DVISWSTMIAG-- 229
++ +K +L + ++DM + G L+ A + + M + DV W ++++
Sbjct: 720 -YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 230 LAQNGFSLE--ALKLFDSMKVMGPRPNYITILGVLFA 264
+ QN E A KLF+ + +P +L L+A
Sbjct: 779 IHQNLEMGEKVAAKLFE---LEPEKPENYVLLSNLYA 812
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 21/263 (7%)
Query: 86 LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYK 145
L +D + + +I +Y+ G ++ VF + + + WN++I++++++ DE L +
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 146 KM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKC 202
+M D T V++AC GMS + +G H V+K +D+ + NAL+ Y
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP----RPNYITI 258
G + DA +F+ M ++++SW++MI + NGFS E+ L M P+ T+
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYG------IDPGREHYGCMLDLLGRAGKLDDMVK 312
+ VL C+ + G K ++G +D ++D+ + G + + +
Sbjct: 296 VTVLPVCAREREIGLG-------KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN-AQ 347
Query: 313 LIHEMNCKPDVVTWRTLLDACRA 335
+I +MN +VV+W T++ A
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSA 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHV---LKFDQDLILHNALLDMYCKCGSLEDAKFIF 212
+ L +L+A +E+GR+ H V + D +L ++ MY CGS +D++F+F
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITILGVLFACS----- 266
+ + K++ W+ +I+ ++N E L+ F M P++ T V+ AC+
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 267 -----------HAGLVDD-----------GWHYFRS-MKNLYGIDPGRE--HYGCMLDLL 301
GLV+D G H F + L+ I P R + M+ +
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 302 GRAGKLDDMVKLIHEMNCK-------PDVVTWRTLLDACRAHRNVDLAT----YAAKEIL 350
G ++ L+ EM + PDV T T+L C R + L +A K L
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK--L 321
Query: 351 KLDAE 355
+LD E
Sbjct: 322 RLDKE 326
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 332/537 (61%), Gaps = 11/537 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY ++ A+ VFD+ +R + W + A + + + L M R GV + FT
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 FSSVLRAC-------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
++ VL+AC +L K+IH+ + + G S V++ + L+D+Y++ G + A VF
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLT--SVLRACTGMSL 171
M + V W+++IA +A++ EAL +++M R + +++T SVL+AC ++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 172 LELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
LE G+ H ++L+ D IL +AL+ MY +CG LE + +F+RM +DV+SW+++I+
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+G+ +A+++F+ M G P +T + VL ACSH GLV++G F +M +GI P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
EHY CM+DLLGRA +LD+ K++ +M +P W +LL +CR H NV+LA A++ +
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 350 LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILG 409
L+ ++ G YVLL++ YA ++MW++V V++ + +G++K PG W+EV +++++F+
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSV 540
Query: 410 DKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIM 469
D+ +P +++I L + + GY+P T VL +LE E++E + HSEKLA+ FG++
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLI 600
Query: 470 SFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ K + IR+ KNLR+C DCH+F K I+K ++ I++RD R+H F++GVCSCGDYW
Sbjct: 601 NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 167/328 (50%), Gaps = 17/328 (5%)
Query: 43 MKLLVFMLREGVMPNMFTFSSVLRACEY---LSDIKQIHSSILKVGLESDVFVRSALIDV 99
+K + +L + P+ T+ ++ C + LSD ++H IL G + D F+ + LI +
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 100 YSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTL 159
YS LG + A VF + VWN++ A G+E L LY KM R G +D+ T
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 160 TSVLRACTG----MSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFN 213
T VL+AC ++ L G++ H H+ + + + + L+DMY + G ++ A ++F
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM--KVMGPRPNYITILGVLFACSHAGLV 271
M V++V+SWS MIA A+NG + EAL+ F M + PN +T++ VL AC+ +
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 272 DDG--WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL 329
+ G H + + L I P ++ + GR GKL+ ++ M+ + DVV+W +L
Sbjct: 302 EQGKLIHGYILRRGLDSILPV---ISALVTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSL 357
Query: 330 LDACRAHRNVDLATYAAKEILKLDAEDT 357
+ + H A +E+L A T
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPT 385
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 312/529 (58%), Gaps = 6/529 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + E++ V +MP R+VV+W +I Y+ + D+A+ M EGV N T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 61 FSSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
SVL AC D+ K +H+ I+ G ESD V+++LI +Y+K G+L + +F +
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + WN+++AA A H G+E L L KMR G DQ + + L A +++LE G+
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H +K F+ D + NA DMY KCG + + + V + + SW+ +I+ L ++G
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ E F M MG +P ++T + +L ACSH GLVD G Y+ + +G++P EH
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 688
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++DLLGR+G+L + I +M KP+ + WR+LL +C+ H N+D AA+ + KL+
Sbjct: 689 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 748
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
ED YVL SN +A + W DV VR+ M K I+K+ CSW+++ ++ +F +GD++HP
Sbjct: 749 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 808
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
Q EI +L + +GYV DT+ LQD + EQ+E +L +HSE+LA+ + +MS P+
Sbjct: 809 QTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEG 868
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCG 523
T+R++KNLRIC DCH K ++++ R IV+RD R+HHF G+ G
Sbjct: 869 STVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 190/369 (51%), Gaps = 8/369 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + L+ ++ VF+EMP+RNVVSWT+++ YS + + + M EGV N +
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 61 FSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S V+ +C L D +QI ++K GLES + V ++LI + +G + A +F +M
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + WNSI AA+AQ+ +E+ ++ MRR + +T++++L + + GR
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 265
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V+K FD + + N LL MY G +A +F +M KD+ISW++++A +G
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
SL+AL L SM G NY+T L AC + G + + G+ +
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGN 384
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
++ + G+ G++ + +++ +M + DVV W L+ + D A AA + ++++
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV 442
Query: 356 DTGAYVLLS 364
+ ++S
Sbjct: 443 SSNYITVVS 451
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 41/361 (11%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A +FD+M ER+ +SW ++ +AY+ + + ++ M R N T S++L +
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 71 LSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+ K IH ++K+G +S V V + L+ +Y+ G +EA VFK+M T D + WNS+
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH----VHVL 183
+A+F +AL L M +G + T TS L AC E GR H V L
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
++Q I+ NAL+ MY K G + +++ + +M +DV++W+ +I G A++ +AL F
Sbjct: 377 FYNQ--IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 244 DSMKVMGPRPNYITILGVLFAC------------SHAGLVDDGWHYFRSMKNLYGIDPGR 291
+M+V G NYIT++ VL AC HA +V G+ +KN
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN-------- 486
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
++ + + G L L + ++ + +++TW +L A H + +E+LK
Sbjct: 487 ----SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGH-------GEEVLK 534
Query: 352 L 352
L
Sbjct: 535 L 535
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 164/323 (50%), Gaps = 16/323 (4%)
Query: 18 MPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC----EYLSD 73
MP RN VSW TM+S V L M+ M G+ P+ F +S++ AC +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
Q+H + K GL SDV+V +A++ +Y G + + VF+EM + V W S++ ++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLIL 191
+ +E + +YK MR G ++++++ V+ +C + LGRQ V+K + L +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
N+L+ M G+++ A +IF++M +D ISW+++ A AQNG E+ ++F M+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 252 RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR----AGKL 307
N T+ +L H D + R + L + G + C+ + L R AG+
Sbjct: 241 EVNSTTVSTLLSVLGHV----DHQKWGRGIHGLV-VKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 308 DDMVKLIHEMNCKPDVVTWRTLL 330
+ + +M K D+++W +L+
Sbjct: 296 VEANLVFKQMPTK-DLISWNSLM 317
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/527 (38%), Positives = 309/527 (58%), Gaps = 8/527 (1%)
Query: 8 LEEAQVVFDEM-PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM-PNMFTFSSVL 65
L AQ++FD + + W +I +S+ ++ ML V P++FTF+ L
Sbjct: 55 LSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFAL 114
Query: 66 RACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
++CE + I +IH S+++ G D V ++L+ YS G + A VF EM D V
Sbjct: 115 KSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLV 174
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WN +I F+ ++AL +YK+M G D TL ++L +C +S L +G H
Sbjct: 175 SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA 234
Query: 183 --LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
++ + + + NAL+DMY KCGSLE+A +FN M +DV++W++MI G +G +EA+
Sbjct: 235 CDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAI 294
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
F M G RPN IT LG+L CSH GLV +G +F M + + + P +HYGCM+DL
Sbjct: 295 SFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDL 354
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY 360
GRAG+L++ +++I+ +C D V WRTLL +C+ HRN++L A K++++L+A + G Y
Sbjct: 355 YGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDY 414
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEIS 420
VL+++ Y+ + A +R+ +R ++ PG SWIE+ Q+H F++ DK HP+ I
Sbjct: 415 VLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIY 474
Query: 421 RQLNQFISRLTGAGYVP-DTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRV 479
+L + I+R AGY P D+N L + HSEKLAI +G+M T+R+
Sbjct: 475 SELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRI 534
Query: 480 WKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KNLR+C DCH F K ++K R I++RD +R+HHF DG+CSC DYW
Sbjct: 535 TKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 128/273 (46%), Gaps = 8/273 (2%)
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALID--VYSKLGELLEALSVFKEMVTGDR 121
+L+ C + +++IHS ++ GL+ + + L+ S G L A +F +
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 122 VV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGRQAH 179
WN +I F+ S ++ Y +M + D T L++C + + + H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
V++ F D I+ +L+ Y GS+E A +F+ M V+D++SW+ MI + G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
+AL ++ M G + T++ +L +C+H ++ G R ++ + +
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR-CESCVFVSNAL 249
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+D+ + G L++ + + + M K DV+TW +++
Sbjct: 250 IDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 32/233 (13%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LE A VF+ M +R+V++W +MI Y A+ M+ GV PN T
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 61 FSSVLRACEYLSDIKQ--IHSSIL--KVGLESDVFVRSALIDVYSKLGELLEALS-VFKE 115
F +L C + +K+ H I+ + L +V ++D+Y + G+L +L ++
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR--AGFPADQSTLTSV----------- 162
D V+W +++ + H + + KK+ + A D +TS+
Sbjct: 372 SCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFA 431
Query: 163 ----------LRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSL 205
L+ G S +E+G Q H KF D +H +Y + G +
Sbjct: 432 SMRKLIRSHDLQTVPGWSWIEIGDQVH----KFVVDDKMHPESAVIYSELGEV 480
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/538 (40%), Positives = 322/538 (59%), Gaps = 13/538 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYS-SVKLNDRAMKLLVFMLREGVMPNMF 59
+Y + L E + +F MPE + VSW ++I A + S + A+ + R G N
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 60 TFSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TFSSVL A + KQIH LK + + +ALI Y K GE+ +F M
Sbjct: 519 TFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Query: 117 VTG-DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D V WNS+I+ + + +AL L M + G D +VL A ++ LE G
Sbjct: 579 AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H ++ + D+++ +AL+DMY KCG L+ A FN M V++ SW++MI+G A++
Sbjct: 639 MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH 698
Query: 234 GFSLEALKLFDSMKVMGPRP-NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
G EALKLF++MK+ G P +++T +GVL ACSHAGL+++G+ +F SM + YG+ P E
Sbjct: 699 GQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 758
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC-RAH-RNVDLATYAAKEIL 350
H+ CM D+LGRAG+LD + I +M KP+V+ WRT+L AC RA+ R +L AA+ +
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 818
Query: 351 KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD 410
+L+ E+ YVLL N YA W D+ + R+ M+ ++KE G SW+ + +H F+ GD
Sbjct: 819 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 878
Query: 411 KSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMS 470
KSHP D I ++L + ++ AGYVP T F L DLE E +E+ L +HSEKLA+ F +++
Sbjct: 879 KSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLA 937
Query: 471 FPKEKT--IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ T IR+ KNLR+CGDCH K I+K+E R I++RD R+HHF+DG CSC D+W
Sbjct: 938 AQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 171/347 (49%), Gaps = 19/347 (5%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A F ++ +N VSW ++IS YS A ++ M +G P +TF S++
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 71 LSD-----IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
L++ ++QI +I K GL +D+FV S L+ ++K G L A VF +M T + V N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSL-----LELGRQAHV 180
++ + G+EA L+ M + +L + SL L+ GR+ H
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 181 HVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
HV+ D + + N L++MY KCGS+ DA+ +F M KD +SW++MI GL QNG +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGC 296
EA++ + SM+ P T++ L +C+ G + S+K GID
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LGIDLNVSVSNA 455
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA-CRAHRNVDLA 342
++ L G L++ K+ M + D V+W +++ A R+ R++ A
Sbjct: 456 LMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERSLPEA 501
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 168/351 (47%), Gaps = 49/351 (13%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A+ VFDEMP RN VSW ++S YS + A+ L M++EG+ N + F SVLRAC+
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 71 LSDI-----KQIHSSILKVGLESDVFVRSALIDVYSK-LGELLEALSVFKEMVTGDRVVW 124
+ + +QIH + K+ D V + LI +Y K +G + AL F ++ + V W
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE----LGRQAHV 180
NSII+ ++Q D A ++ M+ G + T S++ T SL E L Q
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMC 232
Query: 181 HVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
+ K DL + + L+ + K GSL A+ +FN+M ++ ++ + ++ GL + + E
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 239 ALKLF---DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A KLF +SM + P +Y+ +L S A V G+ GRE +G
Sbjct: 293 ATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEV--------------GLKKGREVHG 337
Query: 296 ----------------CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++++ + G + D ++ + M K D V+W +++
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMI 387
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 176/381 (46%), Gaps = 55/381 (14%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +A+ VF M +++ VSW +MI+ A++ M R ++P FT
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S L +C L K QIH LK+G++ +V V +AL+ +Y++ G L E +F M
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 118 TGDRVVWNSIIAAFAQHSDG-DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D+V WNSII A A+ EA+ + +RAG ++ T +SVL A + +S ELG+
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 177 QAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVV-KDVISWSTMIAGLAQN 233
Q H LK + + NAL+ Y KCG ++ + IF+RM +D ++W++MI+G N
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 234 GFSLEALKLFDSMKVMGPRPN---YITILGV------------LFAC------------- 265
+AL L M G R + Y T+L + AC
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 266 -------SHAGLVDDGWHYFRSMKNLYGIDPGREHY--GCMLDLLGRAGKLDDMVKLIHE 316
S G +D +F +M P R Y M+ R G+ ++ +KL
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTM-------PVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 317 M----NCKPDVVTWRTLLDAC 333
M PD VT+ +L AC
Sbjct: 711 MKLDGQTPPDHVTFVGVLSAC 731
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 165/343 (48%), Gaps = 14/343 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR------EGVM 55
+ K L A+ VF++M RN V+ ++ K + A KL + M E +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 56 PNMFTFSSVLRACEY-LSDIKQIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVF 113
+ +F A E L +++H ++ GL + V + + L+++Y+K G + +A VF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
M D V WNS+I Q+ EA+ YK MRR TL S L +C + +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 174 LGRQAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
LG+Q H LK DL + NAL+ +Y + G L + + IF+ M D +SW+++I LA
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 232 QNGFSL-EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDP 289
++ SL EA+ F + + G + N IT VL A S + G + ++KN +
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
E+ ++ G+ G++D K+ M + D VTW +++
Sbjct: 553 TTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 55 MPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
M N S V + + HS + K L+ DV++ + LI+ Y + G+ + A VF
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLL 172
EM + V W I++ ++++ + EAL + M + G ++Q SVLRAC G +
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 173 ELGRQAH--VHVLKFDQDLILHNALLDMYCKC-GSLEDAKFIFNRMVVKDVISWSTMIAG 229
GRQ H + L + D ++ N L+ MY KC GS+ A F + VK+ +SW+++I+
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILG-VLFACS 266
+Q G A ++F SM+ G RP T V ACS
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 161 SVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDV 220
S +++C G + ++ + D+D+ L N L++ Y + G A+ +F+ M +++
Sbjct: 8 SFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS 280
+SW+ +++G ++NG EAL M G N + VL AC G V
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--------- 118
Query: 281 MKNLYGIDPGREHYGCMLDL 300
GI GR+ +G M L
Sbjct: 119 -----GILFGRQIHGLMFKL 133
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 319/527 (60%), Gaps = 6/527 (1%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
N + A +F + + + TMI Y +V + A+ M++ G P+ FT+ +L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 66 RACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
+AC L I KQIH + K+GLE+DVFV+++LI++Y + GE+ + +VF+++ +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
W+S+++A A E L L++ M A++S + S L AC L LG H
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 182 VLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
+L+ + ++I+ +L+DMY KCG L+ A IF +M ++ +++S MI+GLA +G A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L++F M G P+++ + VL ACSH+GLV +G F M ++P EHYGC++D
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
LLGRAG L++ ++ I + + + V WRT L CR +N++L AA+E+LKL + + G
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEI 419
Y+L+SN Y+ +MW+DVA R + +KG+++ PG S +E+ + H F+ D+SHP+ EI
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEI 499
Query: 420 SRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRV 479
+ L+Q +L GY PD +L +++ E++++ L+ HS+K+AI FG++ P I++
Sbjct: 500 YKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKI 559
Query: 480 WKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+NLR+C DCH + K I+ + +R IV+RD R+H F+ G CSC DYW
Sbjct: 560 ARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 8/236 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
MY + +E + VF+++ + SW++M+SA + + + + L M E +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
S L AC + IH +L+ E ++ V+++L+D+Y K G L +AL +F++M
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + ++++I+ A H +G+ AL ++ KM + G D SVL AC+ L++ GR
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 177 QAHVHVL---KFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIA 228
+ +L K + + L+D+ + G LE+A + I + + K+ + W T ++
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 304/522 (58%), Gaps = 5/522 (0%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE 69
EA V D++P ++ +++ +S Y + +L E + N T+ S LR
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
Query: 70 YLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
L D+ Q+HS +++ G ++V ALI++Y K G++L A VF + + + +
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
I+ A+ Q +EAL L+ KM P ++ T +L + +SLL+ G H VLK
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
+ +++ NAL++MY K GS+EDA+ F+ M +D+++W+TMI+G + +G EAL+ FD
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
M G PN IT +GVL ACSH G V+ G HYF + + + P +HY C++ LL +A
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 305 GKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLS 364
G D + + DVV WRTLL+AC RN L A+ ++ D+G YVLLS
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLS 548
Query: 365 NTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
N +A S+ W VA+VR M +G++KEPG SWI + Q H F+ D HP+I I ++
Sbjct: 549 NIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVK 608
Query: 425 QFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLR 484
+ +S++ GY PD D++ EQRED+L +HSEKLA+ +G++ P++ + V KN+R
Sbjct: 609 EVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVR 668
Query: 485 ICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IC DCH KLI+K+ +R+IVIRD R+HHF DG CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 160/345 (46%), Gaps = 14/345 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
+YVK A+ +FD MPERNVVSW M+ Y + + +KL M G PN F
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+ V ++C I KQ H LK GL S FVR+ L+ +YS EA+ V ++
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V++S ++ + + E L + +K F + T S LR + + L L
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H +++ F+ ++ AL++MY KCG + A+ +F+ +++ +T++ Q+
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
EAL LF M PN T +L + + L+ G + L R H
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----DLLHGLVLKSGYRNHV 373
Query: 295 ---GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++++ ++G ++D K M + D+VTW T++ C H
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 138 DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ-----DLILH 192
D+ L K ++ FP D+ L +L+ C S L +G H H++ +Q D
Sbjct: 15 DKLASLVPKSKKTPFPIDR--LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI 72
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG-P 251
N+L+++Y KC A+ +F+ M ++V+SW M+ G +GF E LKLF SM G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 252 RPNYITILGVLFACSHAGLVDDGWHY 277
RPN V +CS++G +++G +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQF 158
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E+A+ F M R++V+W TMIS S L A++ M+ G +PN T
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F VL+AC ++ ++Q + + K ++ D+ + ++ + SK G +A +
Sbjct: 442 FIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTA 501
Query: 117 -VTGDRVVWNSIIAA 130
+ D V W +++ A
Sbjct: 502 PIEWDVVAWRTLLNA 516
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 14/258 (5%)
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLES---DVFVRSALIDVYSKLGELLEALSVFK 114
+ +L+ C YL + IH+ ++ S D + ++LI++Y K E + A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLE 173
M + V W +++ + E L L+K M +G ++ T V ++C+ +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 174 LGRQAHVHVLKFDQDLILH----NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
G+Q H LK+ LI H N L+ MY C +A + + + D+ +S+ ++G
Sbjct: 154 EGKQFHGCFLKY--GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+ G E L + N +T L L S+ ++ M +G +
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNA 270
Query: 290 GREHYGCMLDLLGRAGKL 307
E G ++++ G+ GK+
Sbjct: 271 EVEACGALINMYGKCGKV 288
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/530 (36%), Positives = 327/530 (61%), Gaps = 6/530 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L +++ F++ P+++ +W+++IS ++ +L +++ L M+ + P+
Sbjct: 60 YSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVL 119
Query: 62 SSVLRACEYLS--DI-KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S ++C LS DI + +H +K G ++DVFV S+L+D+Y+K GE++ A +F EM
Sbjct: 120 PSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V W+ ++ +AQ + +EAL+L+K+ + + +SV+ C +LLELGRQ
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 179 H--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H FD + ++L+ +Y KCG E A +FN + VK++ W+ M+ AQ+ +
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
+ ++LF MK+ G +PN+IT L VL ACSHAGLVD+G +YF MK I+P +HY
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE-SRIEPTDKHYAS 358
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
++D+LGRAG+L + +++I M P W LL +C H+N +LA +AA ++ +L
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQI 416
+G ++ LSN YA + D A+ R+ +R +G +KE G SW+E ++H F G++ H +
Sbjct: 419 SGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKS 478
Query: 417 DEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKT 476
EI +L + + AGY+ DT++VL++++G+++ ++R+HSE+LAI FG+++FP ++
Sbjct: 479 KEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRP 538
Query: 477 IRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IRV KNLR+CGDCH K ++ +R I++RD R+H F DG CSC DYW
Sbjct: 539 IRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 133/257 (51%), Gaps = 6/257 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A+ +FDEMP+RNVV+W+ M+ Y+ + N+ A+ L L E + N ++
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FSSV+ C L +QIH +K +S FV S+L+ +YSK G A VF E+
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ +WN+++ A+AQHS + + L+K+M+ +G + T +VL AC+ L++ GR
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 178 A--HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIAGLAQNG 234
+ + + + +L+DM + G L++A + M + S W ++ +
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHK 399
Query: 235 FSLEALKLFDSMKVMGP 251
+ A D + +GP
Sbjct: 400 NTELAAFAADKVFELGP 416
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 309/536 (57%), Gaps = 21/536 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK L A+ VFD+M + V+ T ++ Y+ A+KL V ++ EGV + F
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FS VL+AC L ++ KQIH+ + K+GLES+V V + L+D Y K A F+E+
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQS-TLTSVLRACTGMSLLELGR 176
+ V W++II+ + Q S +EA+ +K +R S T TS+ +AC+ ++ +G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 177 QAHVHVLKFDQDLIL----HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
Q H +K + LI +AL+ MY KCG L+DA +F M D+++W+ I+G A
Sbjct: 408 QVHADAIK--RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
G + EAL+LF+ M G +PN +T + VL ACSHAGLV+ G H +M Y + P +
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID 525
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
HY CM+D+ R+G LD+ +K + M +PD ++W+ L C H+N++L A +E+ +L
Sbjct: 526 HYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
D EDT YVL N Y + W + AE+ + M + ++KE CSWI+ +IH FI+GDK
Sbjct: 586 DPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKH 645
Query: 413 HPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSF- 471
HPQ EI +L +F + G + + +R + L HSE+LAI FG++S
Sbjct: 646 HPQTQEIYEKLKEFDGFMEGDMFQCNMT---------ERREQLLDHSERLAIAFGLISVH 696
Query: 472 -PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I+V+KNLR C DCH FAK ++ + IVIRD R+HHF++G CSC DYW
Sbjct: 697 GNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 163/340 (47%), Gaps = 12/340 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + LE+A +FDEM E N VS TTMISAY+ + D+A+ L ML G P
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++++L++ L +QIH+ +++ GL S+ + + ++++Y K G L+ A VF +M
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V ++ + Q +AL L+ + G D + VL+AC + L LG+Q
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V K + ++ + L+D Y KC S E A F + + +SWS +I+G Q
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 236 SLEALKLFDSMKVMGPRP-NYITILGVLFACSHAGLVDDGW--HYFRSMKNLYGIDPGRE 292
EA+K F S++ N T + ACS + G H ++L G G
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE- 425
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + + G LDD ++ M+ PD+V W +
Sbjct: 426 --SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 151/311 (48%), Gaps = 12/311 (3%)
Query: 29 MISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSIL----KV 84
++S KLN+ A + L M + GV + +++ + AC L + H +L ++
Sbjct: 55 LVSLSKHRKLNE-AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLS--HGRLLHDRMRM 111
Query: 85 GLES-DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYL 143
G+E+ V +++ ++ +Y + L +A +F EM + V ++I+A+A+ D+A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCK 201
+ M +G S T++L++ L+ GRQ H HV++ + + +++MY K
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 202 CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
CG L AK +F++M VK ++ + ++ G Q G + +ALKLF + G + V
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP 321
L AC+ ++ G + L G++ ++D + + + E+ +P
Sbjct: 292 LKACASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EP 349
Query: 322 DVVTWRTLLDA 332
+ V+W ++
Sbjct: 350 NDVSWSAIISG 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--V 180
V N + + ++H +EA ++M +AG + + AC + L GR H +
Sbjct: 50 VENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM 109
Query: 181 HVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+ + ++L N +L MYC+C SLEDA +F+ M + +S +TMI+ A+ G +A+
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 241 KLFDSMKVMGPRPN---YITILGVL 262
LF M G +P Y T+L L
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSL 194
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 320/563 (56%), Gaps = 37/563 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K N ++ A+ +FDE N+ M S Y L A+ + M+ GV P+ +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKL-------------- 103
S + +C L +I K H +L+ G ES + +ALID+Y K
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 104 -----------------GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
GE+ A F+ M + V WN+II+ Q S +EA+ ++
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 147 MR-RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCG 203
M+ + G AD T+ S+ AC + L+L + + ++ K D+ L L+DM+ +CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
E A IFN + +DV +W+ I +A G + A++LFD M G +P+ + +G L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
ACSH GLV G F SM L+G+ P HYGCM+DLLGRAG L++ V+LI +M +P+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
V W +LL ACR NV++A YAA++I L E TG+YVLLSN YA++ WND+A+VR +M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 384 RVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVL 443
+ KG+RK PG S I++ + H F GD+SHP++ I L++ R + G+VPD + VL
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Query: 444 QDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRH 503
D++ +++ L HSEKLA+ +G++S K TIR+ KNLR+C DCH FAK +K+ R
Sbjct: 760 MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNRE 819
Query: 504 IVIRDPIRYHHFRDGVCSCGDYW 526
I++RD R+H+ R G CSCGD+W
Sbjct: 820 IILRDNNRFHYIRQGKCSCGDFW 842
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 42/364 (11%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFT 60
Y + L+ A+ VFDEM ERNVVSWT+MI Y+ A+ L M+R E V PN T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
V+ AC L D+ +++++ I G+E + + SAL+D+Y K + A +F E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + N++ + + + EAL ++ M +G D+ ++ S + +C+ + + G+
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VV-------------- 217
H +VL+ F+ + NAL+DMY KC + A IF+RM VV
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 218 -------------KDVISWSTMIAGLAQNGFSLEALKLFDSMKVM-GPRPNYITILGVLF 263
K+++SW+T+I+GL Q EA+++F SM+ G + +T++ +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 264 ACSHAGLVD-DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
AC H G +D W Y+ KN GI ++D+ R G + + + + + + D
Sbjct: 479 ACGHLGALDLAKWIYYYIEKN--GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-D 535
Query: 323 VVTW 326
V W
Sbjct: 536 VSAW 539
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 166/334 (49%), Gaps = 30/334 (8%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIHSSIL 82
+ ++I Y+S L + A+ L + M+ G+ P+ +TF L AC + QIH I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
K+G D+FV+++L+ Y++ GEL A VF EM + V W S+I +A+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 143 LYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMY 199
L+ +M R + T+ V+ AC + LE G + + + + + ++ +AL+DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 200 CKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITIL 259
KC +++ AK +F+ ++ + M + + G + EAL +F+ M G RP+ I++L
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 260 GVLFACS-----------HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
+ +CS H ++ +G+ + ++ N ++D+ + + D
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN------------ALIDMYMKCHRQD 389
Query: 309 DMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
++ M+ K VVTW +++ + VD A
Sbjct: 390 TAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDAA 422
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT---- 118
S L+ C+ + ++K H S+ K GL++DV + L+ +LG E+LS KE+
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTR-ESLSFAKEVFENSES 95
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
G ++NS+I +A +EA+ L+ +M +G D+ T L AC G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K + +DL + N+L+ Y +CG L+ A+ +F+ M ++V+SW++MI G A+ F
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 236 SLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A+ LF M + PN +T++ V+ AC+ ++ G + ++N GI+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN-SGIEVNDLMV 274
Query: 295 GCMLDLLGRAGKLDDMVKLIHE 316
++D+ + +D +L E
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE 296
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 319/566 (56%), Gaps = 40/566 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM-PNMF 59
+Y K A VFDEMP R+ ++W ++++A + L+ + + + + + P+ F
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE- 115
FS++++AC L I +Q+H + +D V+S+L+D+Y+K G L A +VF
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 116 ----------MVTG--------------------DRVVWNSIIAAFAQHSDGDEALYLYK 145
MV+G + W ++I+ F Q G EA ++
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 146 KMRRAGFPA-DQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKC 202
+MRR D L+S++ AC ++ GRQ H V L FD + + NAL+DMY KC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
+ AK IF+RM +DV+SW+++I G+AQ+G + +AL L+D M G +PN +T +G++
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
+ACSH G V+ G F+SM YGI P +HY C+LDLLGR+G LD+ LIH M PD
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 323 VVTWRTLLDACRAHRNVDLATYAAKEIL-KLDAEDTGAYVLLSNTYANSKMWNDVAEVRR 381
TW LL AC+ + A ++ +D Y+LLSN YA++ +W V+E RR
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Query: 382 TMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRL-TGAGYVPDTN 440
+ +RK+PG S +EV K+ F G+ SHP ++I R L + + GYVPDT+
Sbjct: 467 KLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
Query: 441 FVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLE 500
++L D++ +++E L HSE+ A+ +G++ IR+ KNLR+CGDCH+ K I+++
Sbjct: 527 WILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEIT 586
Query: 501 QRHIVIRDPIRYHHFRDGVCSCGDYW 526
+R I++RD RYHHF+ G CSC D+W
Sbjct: 587 EREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 3/181 (1%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
L+ K +H+ I+K+G+ + + L++VY K G AL VF EM D + W S++ A
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 131 FAQHS-DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH--VLKFDQ 187
Q + G +G D +++++AC + ++ GRQ H H V ++
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
D ++ ++L+DMY KCG L AK +F+ + VK+ ISW+ M++G A++G EAL+LF +
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 248 V 248
V
Sbjct: 199 V 199
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 163 LRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDV 220
L+ C L + H H++K Q L N L+++Y KCG+ A +F+ M +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDG 274
I+W++++ L Q S + L +F S+ RP+ ++ AC++ G +D G
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/562 (38%), Positives = 319/562 (56%), Gaps = 37/562 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K N ++ A+ +FDE N+ M S Y L A+ + M+ GV P+ +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKL-------------- 103
S + +C L +I K H +L+ G ES + +ALID+Y K
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 104 -----------------GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
GE+ A F+ M + V WN+II+ Q S +EA+ ++
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 147 MR-RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCG 203
M+ + G AD T+ S+ AC + L+L + + ++ K D+ L L+DM+ +CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
E A IFN + +DV +W+ I +A G + A++LFD M G +P+ + +G L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
ACSH GLV G F SM L+G+ P HYGCM+DLLGRAG L++ V+LI +M +P+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
V W +LL ACR NV++A YAA++I L E TG+YVLLSN YA++ WND+A+VR +M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 384 RVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVL 443
+ KG+RK PG S I++ + H F GD+SHP++ I L++ R + G+VPD + VL
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Query: 444 QDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRH 503
D++ +++ L HSEKLA+ +G++S K TIR+ KNLR+C DCH FAK +K+ R
Sbjct: 760 MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNRE 819
Query: 504 IVIRDPIRYHHFRDGVCSCGDY 525
I++RD R+H+ R G CSCGD+
Sbjct: 820 IILRDNNRFHYIRQGKCSCGDF 841
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 42/364 (11%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFT 60
Y + L+ A+ VFDEM ERNVVSWT+MI Y+ A+ L M+R E V PN T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
V+ AC L D+ +++++ I G+E + + SAL+D+Y K + A +F E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + N++ + + + EAL ++ M +G D+ ++ S + +C+ + + G+
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VV-------------- 217
H +VL+ F+ + NAL+DMY KC + A IF+RM VV
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 218 -------------KDVISWSTMIAGLAQNGFSLEALKLFDSMKVM-GPRPNYITILGVLF 263
K+++SW+T+I+GL Q EA+++F SM+ G + +T++ +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 264 ACSHAGLVD-DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
AC H G +D W Y+ KN GI ++D+ R G + + + + + + D
Sbjct: 479 ACGHLGALDLAKWIYYYIEKN--GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-D 535
Query: 323 VVTW 326
V W
Sbjct: 536 VSAW 539
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 166/334 (49%), Gaps = 30/334 (8%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIHSSIL 82
+ ++I Y+S L + A+ L + M+ G+ P+ +TF L AC + QIH I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
K+G D+FV+++L+ Y++ GEL A VF EM + V W S+I +A+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 143 LYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMY 199
L+ +M R + T+ V+ AC + LE G + + + + + ++ +AL+DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 200 CKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITIL 259
KC +++ AK +F+ ++ + M + + G + EAL +F+ M G RP+ I++L
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 260 GVLFACS-----------HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
+ +CS H ++ +G+ + ++ N ++D+ + + D
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN------------ALIDMYMKCHRQD 389
Query: 309 DMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
++ M+ K VVTW +++ + VD A
Sbjct: 390 TAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDAA 422
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT---- 118
S L+ C+ + ++K H S+ K GL++DV + L+ +LG E+LS KE+
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTR-ESLSFAKEVFENSES 95
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
G ++NS+I +A +EA+ L+ +M +G D+ T L AC G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K + +DL + N+L+ Y +CG L+ A+ +F+ M ++V+SW++MI G A+ F
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 236 SLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A+ LF M + PN +T++ V+ AC+ ++ G + ++N GI+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN-SGIEVNDLMV 274
Query: 295 GCMLDLLGRAGKLDDMVKLIHE 316
++D+ + +D +L E
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE 296
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 315/535 (58%), Gaps = 9/535 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M+VK ++ +A+ +FDE+PERN+ S+ ++IS + + A +L M E T
Sbjct: 167 MHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHT 226
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ +LRA L I KQ+H LK+G+ + FV LID+YSK G++ +A F+ M
Sbjct: 227 FAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP 286
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V WN++IA +A H +EAL L MR +G DQ TL+ ++R T ++ LEL +Q
Sbjct: 287 EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQ 346
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
AH +++ F+ +++ + AL+D Y K G ++ A+++F+++ K++ISW+ ++ G A +G
Sbjct: 347 AHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGR 406
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+A+KLF+ M PN++T L VL AC+++GL + GW F SM ++GI P HY
Sbjct: 407 GTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYA 466
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM++LLGR G LD+ + I K V W LL+ACR N++L A+++ + E
Sbjct: 467 CMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPE 526
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
G YV++ N Y + + A V T+ KG+ P C+W+EV Q H+F+ GD+
Sbjct: 527 KLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSY 586
Query: 416 IDEISRQLNQFISRL----TGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSF 471
+ + RQ+ Q + L + GY + +L D++ ++ E R+HSEKLAI +G+++
Sbjct: 587 NETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNT 646
Query: 472 PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
P+ +++ +N RIC +CH + I+ + R +V+RD R+HHF++G CSCG YW
Sbjct: 647 PEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ +++ AC L I K+++ ++ G E + ++ + ++ ++ K G +++A +F E+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + SII+ F + EA L+K M + T +LRA G+ + +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 177 QAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q HV LK + + L+DMY KCG +EDA+ F M K ++W+ +IAG A +G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACS------------HAGLVDDG-------- 274
+S EAL L M+ G + T L ++ S HA L+ +G
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFT-LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 275 ---------WHYFRSMKNLYGIDPGRE--HYGCMLDLLGRAGKLDDMVKLIHEM---NCK 320
W + + ++ P + + ++ G+ D VKL +M N
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 321 PDVVTWRTLLDAC 333
P+ VT+ +L AC
Sbjct: 424 PNHVTFLAVLSAC 436
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/532 (37%), Positives = 311/532 (58%), Gaps = 6/532 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + A+ VF+ M ++ VSW ++IS Y AMKL M+ + T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ ++ L+D+K +HS+ +K G+ D+ V +ALID+Y+K GE+ ++L +F M
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
TGD V WN++I+A + D L + +MR++ D +T L C ++ LG++
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 178 AHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +L+F + +L + NAL++MY KCG LE++ +F RM +DV++W+ MI G
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+AL+ F M+ G P+ + + +++ACSH+GLVD+G F MK Y IDP EHY
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DLL R+ K+ + I M KPD W ++L ACR +++ A ++ I++L+ +
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
D G +L SN YA + W+ V+ +R++++ K I K PG SWIEV K +H F GD S PQ
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQ 770
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLR-HHSEKLAIVFGIMSFPKE 474
+ I + L S + GY+PD V Q+LE E+ + L HSE+LAI FG+++
Sbjct: 771 SEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPG 830
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
++V KNLR+CGDCH KLI+K+ R I++RD R+H F+DG CSC D W
Sbjct: 831 TPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 180/337 (53%), Gaps = 8/337 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+KF +A+ VFDEM R+ VS+ TMI Y +++ + ++++ + L + P++ T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLT 309
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSVLRAC +L D+ K I++ +LK G + VR+ LIDVY+K G+++ A VF M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WNSII+ + Q D EA+ L+K M AD T ++ T ++ L+ G+
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + +K DL + NAL+DMY KCG + D+ IF+ M D ++W+T+I+ + G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
L++ M+ P+ T L L C+ G + +G + +
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGN 548
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++++ + G L++ ++ M+ + DVVTW ++ A
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 187/339 (55%), Gaps = 10/339 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + LL A+ VFDEMP R++VSW ++IS YSS + A+++ + ++P+ FT
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSVL A L +KQ +H LK G+ S V V + L+ +Y K +A VF EM
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V +N++I + + +E++ ++ + F D T++SVLRAC + L L +
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
+ ++LK F + + N L+D+Y KCG + A+ +FN M KD +SW+++I+G Q+G
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 388
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSH-AGLVDDGWHYFRSMKNLYGIDPGREHY 294
+EA+KLF M +M + ++IT L ++ + A L + +K+ ID +
Sbjct: 389 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN- 447
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
++D+ + G++ D +K+ M D VTW T++ AC
Sbjct: 448 -ALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISAC 484
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 170/323 (52%), Gaps = 16/323 (4%)
Query: 19 PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQ-- 76
P +NV W ++I A+S L A++ + V P+ +TF SV++AC L D +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 77 -IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
++ IL +G ESD+FV +AL+D+YS++G L A VF EM D V WNS+I+ ++ H
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 136 DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHN 193
+EAL +Y +++ + D T++SVL A + +++ G+ H LK + ++++N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF----DSMKVM 249
L+ MY K DA+ +F+ M V+D +S++TMI G + E++++F D K
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-- 304
Query: 250 GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
P+ +T+ VL AC H + + + M G ++D+ + G +
Sbjct: 305 ---PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMIT 360
Query: 310 MVKLIHEMNCKPDVVTWRTLLDA 332
+ + M CK D V+W +++
Sbjct: 361 ARDVFNSMECK-DTVSWNSIISG 382
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
S L + L+++++IH+ ++ +GL+S F LID YS E +LSVF+ +
Sbjct: 11 SRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 122 V-VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V +WNSII AF+++ EAL Y K+R + D+ T SV++AC G+ E+G +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 181 HVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
+L F+ DL + NAL+DMY + G L A+ +F+ M V+D++SW+++I+G + +G+ E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
AL+++ +K P+ T+ VL A + +V G
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/531 (36%), Positives = 306/531 (57%), Gaps = 8/531 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++F +++A +F +MP +NV+SWTTMI + + A+ L MLR + F
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ V+ AC Q+H I+K+G + +V ++LI Y+ + ++ VF E V
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
VW ++++ ++ + ++AL ++ M R +QST S L +C+ + L+ G++
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 179 HVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K + D + N+L+ MY G++ DA +F ++ K ++SW+++I G AQ+G
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN-LYGIDPGREHYG 295
A +F M + P+ IT G+L ACSH G ++ G F M + + ID +HY
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+D+LGR GKL + +LI M KP+ + W LL ACR H +VD AA I LD++
Sbjct: 469 CMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSK 528
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ AYVLLSN YA++ W++V+++R M+ GI K+PG SW+ + + H F GD+ P
Sbjct: 529 SSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PH 586
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
I +L +L GY PD L D+E EQ+E+ L +HSE+LAI FG+++ +
Sbjct: 587 CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGS 646
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ V KNLR+C DCH KLI+ + R IV+RDPIR+HHF++G CSCGDYW
Sbjct: 647 AVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 167/356 (46%), Gaps = 9/356 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + N L +A +FDEMP R+VVSW +MIS + A+KL M V+ ++
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SW 131
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
++++ C + Q ++ ++ D ++++ Y + G++ +AL +FK+M +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
+ W ++I Q+ EAL L+K M R + T V+ AC +G Q H
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 182 VLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
++K F + + +L+ Y C + D++ +F+ V + V W+ +++G + N +A
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L +F M PN T L +CS G +D G L G++ ++
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL-GLETDAFVGNSLVV 369
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
+ +G ++D V + ++ K +V+W +++ C H A ++++L+ E
Sbjct: 370 MYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 48 FMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELL 107
F RE ++ N + A E + + H S+ + +I Y++ L+
Sbjct: 35 FQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLY-----------TKMITGYTRSNRLV 83
Query: 108 EALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT 167
+AL++F EM D V WNS+I+ + D + A+ L+ +M + + + R+
Sbjct: 84 DALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGK 143
Query: 168 GMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMI 227
L Q V +D N+++ Y + G ++DA +F +M K+VISW+TMI
Sbjct: 144 VDQAERLFYQMPV------KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI 197
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHA 268
GL QN S EAL LF +M + V+ AC++A
Sbjct: 198 CGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 310/524 (59%), Gaps = 10/524 (1%)
Query: 12 QVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYL 71
++F +P + + ++I + S ++L + ML V P+ +TF+SV+++C L
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 72 SDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSII 128
S + K +H + G D +V++AL+ YSK G++ A VF M V WNS++
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FD 186
+ F Q+ DEA+ ++ +MR +GF D +T S+L AC + LG H +++ D
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 187 QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
++ L AL+++Y +CG + A+ +F++M +V +W+ MI+ +G+ +A++LF+ M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 247 KV-MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
+ GP PN +T + VL AC+HAGLV++G ++ M Y + PG EH+ CM+D+LGRAG
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 306 KLDDMVKLIHEMNCKPDVVT---WRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVL 362
LD+ K IH+++ W +L AC+ HRN DL AK ++ L+ ++ G +V+
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
LSN YA S ++V+ +R M +RK+ G S IEV+ + + F +GD+SH + EI R
Sbjct: 421 LSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRY 480
Query: 423 LNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
L ISR GY P + V+ +E E++E +LR+HSEKLA+ FG++ + I + KN
Sbjct: 481 LETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKN 539
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LRIC DCH K I+ + R I +RD +R+HHF++G CSC DYW
Sbjct: 540 LRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 8/218 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K +E A+ VFD MPE+++V+W +++S + L D A+++ M G P+ TF
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+L AC + +H I+ GL+ +V + +ALI++YS+ G++ +A VF +M
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE 271
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGRQ 177
+ W ++I+A+ H G +A+ L+ KM P + T +VL AC L+E GR
Sbjct: 272 TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 178 AHVHVLK---FDQDLILHNALLDMYCKCGSLEDA-KFI 211
+ + K + H ++DM + G L++A KFI
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFI 369
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
+Y + + +A+ VFD+M E NV +WT MISAY + +A++L M + G +PN
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 60 TFSSVLRACEYLSDIKQIHSSILKV--------GLESDVFVRSALIDVYSKLGELLEALS 111
TF +VL AC + +++ S ++ G+E V ++D+ + G L EA
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYK 367
Query: 112 VFKEM-VTGDRV---VWNSIIAAFAQHSDGDEALYLYKKM 147
++ TG +W +++ A H + D + + K++
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/533 (36%), Positives = 306/533 (57%), Gaps = 13/533 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVS--WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
MY K L+ +A+ VF+E P+ + +S + +IS Y++ A + M GV +
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 FTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T ++ C EYL + +H +K GL+S+V V ++ I +Y K G + +F E
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M + WN++I+ ++Q+ + L LY++M+ +G D TL SVL +C + ++G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 176 RQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ V F ++ + NA + MY +CG+L A+ +F+ M VK ++SW+ MI +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G L LFD M G RP+ + VL ACSH+GL D G FR+MK Y ++PG EH
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y C++DLLGRAG+LD+ ++ I M +PD W LL AC+ H+NVD+A A ++++ +
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
+ G YVL+SN Y++SK + +R MR + RK+PG S++E ++H F+ GD+SH
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSH 516
Query: 414 PQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPK 473
Q +E+ R L++ + + D + GE+ + R HSE+LAI FGI++
Sbjct: 517 EQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSSTTREHSERLAIAFGILNSIP 570
Query: 474 EKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
I V KNLR+C DCH+F K ++K+ R V+RD R+H+F+DGVCSC DYW
Sbjct: 571 GTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 190/376 (50%), Gaps = 11/376 (2%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLS---DIKQIHSSIL 82
W + + L ++ L MLR G P+ F+F +L++C LS +Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR--VVWNSIIAAFAQHSDGDEA 140
K G E++ FV +ALI +Y K G + +A VF+E + V +N++I+ + +S +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 141 LYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDM 198
Y++++M+ G D T+ ++ CT L LGR H +K D ++ + N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y KCGS+E + +F+ M VK +I+W+ +I+G +QNG + + L+L++ MK G P+ T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
+ VL +C+H G G H + G P + + R G L + M
Sbjct: 261 VSVLSSCAHLGAKKIG-HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA-YVLLSNTYANSKMWNDVA 377
K +V+W ++ H ++ +++K GA +V++ + ++S + +
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 378 EVRRTMRVKGIRKEPG 393
E+ R M+ + + EPG
Sbjct: 379 ELFRAMK-REYKLEPG 393
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 305/539 (56%), Gaps = 13/539 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM--PNM 58
MY K + EA+ VF + +R+++SW MI+ + +A+ M + P+
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLE--SDVFVRSALIDVYSKLGELLEALSVF 113
FT +S+L+AC I KQIH +++ G S + +L+D+Y K G L A F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
++ + W+S+I +AQ + EA+ L+K+++ D L+S++ +LL
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 174 LGRQAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
G+Q +K L + N+++DMY KCG +++A+ F M +KDVISW+ +I G
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
++G +++++F M P+ + L VL ACSH+G++ +G F + +GI P
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
EHY C++DLLGRAG+L + LI M KP+V W+TLL CR H +++L K +L+
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 510
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK 411
+DA++ YV++SN Y + WN+ R +KG++KE G SW+E+++++H F G+
Sbjct: 511 IDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGED 570
Query: 412 SHPQIDEISRQLNQFISRLTGA-GYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMS 470
SHP I L + RL GYV L D++ E +E++LR HSEKLAI + +
Sbjct: 571 SHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALAT 630
Query: 471 F---PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
K KTIRV+KNLR+C DCH F K ++K+ + V+RD +R+H F DG CSCGDYW
Sbjct: 631 GGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 209/403 (51%), Gaps = 19/403 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K A VFD MPERNVVSW+ ++S + ++ L M R+G+ PN FT
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FS+ L+AC L+ ++ QIH LK+G E V V ++L+D+YSK G + EA VF+ +V
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP--ADQSTLTSVLRACTGMSLLELG 175
+ WN++IA F G +AL + M+ A D+ TLTS+L+AC+ ++ G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 176 RQAHVHVLKFD----QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
+Q H +++ + +L+D+Y KCG L A+ F+++ K +ISWS++I G A
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL-YGIDPG 290
Q G +EA+ LF ++ + + + + ++ + L+ G + M+ L + G
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSG 345
Query: 291 REH--YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
E ++D+ + G +D+ K EM K DV++W ++ H + E
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 349 ILKLDAE-DTGAYVLLSNTYANSKMWNDVAEV-RRTMRVKGIR 389
+L+ + E D Y+ + + ++S M + E+ + + GI+
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK 447
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 152/287 (52%), Gaps = 12/287 (4%)
Query: 54 VMPNMF-TFSSVLRAC--EYLSDIK-QIHSSILKVGLESDVFVRSALIDVYSKLGELLEA 109
++PN S+LR C + LSD Q+H +LK G ++ + LID+Y K E L A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 110 LSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
VF M + V W+++++ + D +L L+ +M R G ++ T ++ L+AC +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 170 SLLELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMI 227
+ LE G Q H LK ++++ N+L+DMY KCG + +A+ +F R+V + +ISW+ MI
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 228 AGLAQNGFSLEALKLFDSMKV--MGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKN 283
AG G+ +AL F M+ + RP+ T+ +L ACS G++ G H F +++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL-VRS 239
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ G ++DL + G L K ++ K +++W +L+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLI 285
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 316/558 (56%), Gaps = 44/558 (7%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A+ V + + RN WT +I Y+ D A+ + M +E + P FTFS++L+AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 71 LSDI---KQIHSSILK--------VG-----------------------LESDVFVRSAL 96
+ D+ +Q H+ + VG E DV + L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 97 IDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQ 156
I Y+++G + A +F+ + T D V W +++ FAQ++ EAL + +M ++G AD+
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLK-----FDQDLILHNALLDMYCKCGSLEDAKFI 211
T+ + AC + + +A V + + +++ +AL+DMY KCG++E+A +
Sbjct: 282 VTVAGYISACAQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 212 FNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGL 270
F M K+V ++S+MI GLA +G + EAL LF M +PN +T +G L ACSH+GL
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
VD G F SM +G+ P R+HY CM+DLLGR G+L + ++LI M+ +P W LL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
ACR H N ++A AA+ + +L+ + G Y+LLSN YA++ W V VR+ ++ KG++K
Sbjct: 461 GACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Query: 391 EPGCSWIEVDK--QIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEG 448
P SW+ VDK Q+H F G+ +HP ++I +L + + RLT GY PD + V D+
Sbjct: 521 TPAVSWV-VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSD 579
Query: 449 EQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRD 508
+ L H+EKLA+ F +++ ++ TI + KNLR+C DCH F +L +++ + I++RD
Sbjct: 580 NAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRD 639
Query: 509 PIRYHHFRDGVCSCGDYW 526
+R+HHFR G CSCGD+W
Sbjct: 640 NMRFHHFRSGDCSCGDFW 657
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 37/310 (11%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLE--ALSVFKEMVTGD 120
S L C L+ IKQIH +L+ GL+ ++ + LI +KLG ++ A V + + +
Sbjct: 54 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
+W ++I +A DEA+ +Y MR+ T +++L+AC M L LGRQ H
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 181 HVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIA---------- 228
+ ++ N ++DMY KC S++ A+ +F+ M +DVISW+ +IA
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 229 ---------------------GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
G AQN EAL+ FD M+ G R + +T+ G + AC+
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 268 AGLVDDGWHYFR-SMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
G + + K+ Y ++D+ + G +++ V + MN K +V T+
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-NVFTY 352
Query: 327 RTLLDACRAH 336
+++ H
Sbjct: 353 SSMILGLATH 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
MY K +EEA VF M +NV ++++MI ++ A+ L +M+ + + PN
Sbjct: 327 MYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 60 TFSSVLRACEY---LSDIKQIHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKE 115
TF L AC + + +Q+ S+ + G++ + ++D+ + G L EAL + K
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
Query: 116 M-VTGDRVVWNSIIAAFAQHSDGDEA 140
M V VW +++ A H++ + A
Sbjct: 447 MSVEPHGGVWGALLGACRIHNNPEIA 472
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 316/543 (58%), Gaps = 18/543 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMFT 60
YVK + A+ +FDEM E NVVSWT++IS Y+ + A+ + M + V PN +T
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+SV +AC L++ K IH+ + GL ++ V S+L+D+Y K ++ A VF M+
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 118 TGDR--VVWNSIIAAFAQHSDGDEALYLYKKMRRA--GFPADQSTLTSVLRACTGMSLLE 173
R V W S+I A+AQ++ G EA+ L++ A A+Q L SV+ AC+ + L+
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 174 LGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
G+ AH V + ++ + ++ +LLDMY KCGSL A+ IF R+ VIS+++MI A
Sbjct: 254 WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
++G A+KLFD M PNY+T+LGVL ACSH+GLV++G Y M YG+ P
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDS 373
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIH--EMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
HY C++D+LGR G++D+ +L E+ + + W LL A R H V++ + A+K +
Sbjct: 374 RHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRL 433
Query: 350 LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILG 409
++ + + T AY+ LSN YA S W D +R M+ G KE CSWIE ++ F G
Sbjct: 434 IQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAG 493
Query: 410 DKSHPQIDEISRQLNQFISRLTGAGY------VPDTNFVLQDLEGEQREDSLRHHSEKLA 463
D S + EI R L R+ G+ + ++ V D++ E +++ + H E+LA
Sbjct: 494 DLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLA 553
Query: 464 IVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCG 523
+ +G++ P TIR+ NLR+C DCH KLI+++ +R IV+RD R+H F++G C+C
Sbjct: 554 LAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCR 613
Query: 524 DYW 526
DYW
Sbjct: 614 DYW 616
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 9/267 (3%)
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
+H+ LK+G SD F + L+ Y KL E+ A +F EM + V W S+I+ +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 137 GDEALYLYKKMRR-AGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHN 193
AL +++KM P ++ T SV +AC+ ++ +G+ H + + +++++ +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 194 ALLDMYCKCGSLEDAKFIFNRMV--VKDVISWSTMIAGLAQNGFSLEALKLFDSMK--VM 249
+L+DMY KC +E A+ +F+ M+ ++V+SW++MI AQN EA++LF S +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 250 GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
R N + V+ ACS G + G + G + +LD+ + G L
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 310 MVKLIHEMNCKPDVVTWRTLLDACRAH 336
K+ + C V+++ +++ A H
Sbjct: 290 AEKIFLRIRCH-SVISYTSMIMAKAKH 315
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 291/524 (55%), Gaps = 11/524 (2%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMFTFSSVLRACEYLS 72
VF + + TMI A+S + +L + R +P N + S L+ C
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 73 DIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIA 129
D+ QIH I G SD + + L+D+YS +A VF E+ D V WN + +
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 130 AFAQHSDGDEALYLYKKMRR---AGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
+ ++ + L L+ KM+ D T L+AC + L+ G+Q H + +
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
L L N L+ MY +CGS++ A +F M ++V+SW+ +I+GLA NGF EA++ F+
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN-LYGIDPGREHYGCMLDLLGR 303
M G P T+ G+L ACSH+GLV +G +F M++ + I P HYGC++DLLGR
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLL 363
A LD LI M KPD WRTLL ACR H +V+L +++L AE+ G YVLL
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 364 SNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQL 423
NTY+ W V E+R M+ K I +PGCS IE+ +H FI+ D SHP+ +EI + L
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 424 NQFISRLTGAGYVPDTNFVLQDLEGEQRED-SLRHHSEKLAIVFGIMSFPKEKTIRVWKN 482
+ +L AGYV + L +LE E+ + +LR+HSEKLAI FGI+ P TIRV KN
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKN 547
Query: 483 LRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
LR C DCH FAK ++ + R +++RD R+HHF+ G CSC D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-----EG-VMPNMFTFSS 63
+A VFDE+P+R+ VSW + S Y N R +LV + +G V P+ T
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLR---NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLL 222
Query: 64 VLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
L+AC L + KQ+H I + GL + + + L+ +YS+ G + +A VF M +
Sbjct: 223 ALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERN 282
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT-------GMSLLE 173
V W ++I+ A + G EA+ + +M + G ++ TLT +L AC+ GM +
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFD 342
Query: 174 LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
R K +L + ++D+ + L+ A + M +K D W T++
Sbjct: 343 RMRSGE---FKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRV 399
Query: 233 NG 234
+G
Sbjct: 400 HG 401
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + +++A VF M ERNVVSWT +IS + A++ ML+ G+ P T
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 61 FSSVLRACEYLSDIKQ-------IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
+ +L AC + + + + S K+ + ++ ++D+ + L +A S+
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFKI--KPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 114 KEM-VTGDRVVWNSIIAAFAQHSD 136
K M + D +W +++ A H D
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGD 402
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 307/547 (56%), Gaps = 46/547 (8%)
Query: 26 WTTMISA-YSSVKLNDRAMKLLVF--MLREGVMPNMFTFSSVLRACE---YLSDIKQIHS 79
W +I A +V R + V+ M V P+ TF +L + +L ++ H+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 80 SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDE 139
IL GL+ D FVR++L+++YS G+L A VF + + D WNS++ A+A+ D+
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 140 ALYLYKKM----------------------------RRAGFP--------ADQSTLTSVL 163
A L+ +M R P ++ T+++VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 164 RACTGMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRM-VVKDV 220
AC + LE G+ H ++ K+ + D++L AL+DMY KCGSLE AK +FN + KDV
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVM-GPRPNYITILGVLFACSHAGLVDDGWHYFR 279
++S MI LA G + E +LF M PN +T +G+L AC H GL+++G YF+
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 280 SMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNV 339
M +GI P +HYGCM+DL GR+G + + I M +PDV+ W +LL R ++
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 340 DLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
A K +++LD ++GAYVLLSN YA + W +V +R M VKGI K PGCS++EV
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 400 DKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHS 459
+ +H F++GD+S + + I L++ + RL AGYV DT VL DL + +E +L +HS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 460 EKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGV 519
EKLAI F +M +R+ KNLRICGDCH+ K+I+KL R IV+RD R+HHFRDG
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 520 CSCGDYW 526
CSC D+W
Sbjct: 567 CSCRDFW 573
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-----REGVMP 56
Y K L+++A+ +FDEMPERNV+SW+ +I+ Y A+ L M V P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 57 NMFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
N FT S+VL AC L ++Q +H+ I K +E D+ + +ALID+Y+K G L A VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 114 KEMVTGDRV-VWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSL 171
+ + V ++++I A + DE L+ +M + + T +L AC L
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 172 LELGR---QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAK-FIFNRMVVKDVISWSTMI 227
+ G+ + + + + ++D+Y + G +++A+ FI + + DV+ W +++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 228 AG 229
+G
Sbjct: 378 SG 379
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 120 DRVVWNSIIAAFAQHSDGDE---ALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ +WN II A + + + +Y +MR D T +L + L LG+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 177 QAHVHVLKF--DQDLILHNALLDMYCKCGSL----------------------------- 205
+ H +L F D+D + +LL+MY CG L
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 206 --EDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-----RPNYITI 258
+DA+ +F+ M ++VISWS +I G G EAL LF M++ P RPN T+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
VL AC G ++ G + + + Y ++ ++D+ + G L+ ++ + +
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 319 CKPDVVTWRTLL 330
K DV + ++
Sbjct: 262 SKKDVKAYSAMI 273
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 320/558 (57%), Gaps = 37/558 (6%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
NLL A +F ++ N+ + +I +S+ +A ML+ + P+ TF ++
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 66 RACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
+A + + +Q HS I++ G ++DV+V ++L+ +Y+ G + A +F +M D V
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 123 VWNSIIAAF-------------------------------AQHSDGDEALYLYKKMRRAG 151
W S++A + A+++ ++A+ L++ M+R G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 152 FPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAK 209
A+++ + SV+ +C + LE G +A+ +V+K +LIL AL+DM+ +CG +E A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 210 FIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
+F + D +SWS++I GLA +G + +A+ F M +G P +T VL ACSH G
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 270 LVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL 329
LV+ G + +MK +GI+P EHYGC++D+LGRAGKL + I +M+ KP+ L
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGAL 424
Query: 330 LDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
L AC+ ++N ++A ++K+ E +G YVLLSN YA + W+ + +R M+ K ++
Sbjct: 425 LGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 390 KEPGCSWIEVDKQIHAFILG-DKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEG 448
K PG S IE+D +I+ F +G D+ HP++ +I R+ + + ++ GY +T D++
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
Query: 449 EQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRD 508
E++E S+ HSEKLAI +G+M TIR+ KNLR+C DCH KLI+++ R +++RD
Sbjct: 545 EEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRD 604
Query: 509 PIRYHHFRDGVCSCGDYW 526
R+HHFR+GVCSC DYW
Sbjct: 605 RNRFHHFRNGVCSCRDYW 622
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 143/273 (52%), Gaps = 8/273 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K ++E A+ +FDEMP RN+ +W+ MI+ Y+ ++A+ L FM REGV+ N
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SV+ +C +L + ++ + ++K + ++ + +AL+D++ + G++ +A+ VF+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D + W+SII A H +A++ + +M GF T T+VL AC+ L+E G +
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 179 HVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
+ ++ K + L + ++DM + G L +A+ +M VK + G +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 236 SLEALKLFDSM--KVMGPRPNYITILGVLFACS 266
+ E + +M KV Y +L ++AC+
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACA 465
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 155/335 (46%), Gaps = 52/335 (15%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALI------DVYSKLGELLE-ALSVFKE 115
++L++C SD+K IH +L+ L SDVFV S L+ ++K LL A +F +
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ + V+N +I F+ ++ +A Y +M ++ D T +++A + M + +G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 176 RQAHVHVLK--FDQDLILHNALLDM-------------------------------YCKC 202
Q H +++ F D+ + N+L+ M YCKC
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
G +E+A+ +F+ M +++ +WS MI G A+N +A+ LF+ MK G N ++ V+
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 263 FACSHAGLVDDG---WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNC 319
+C+H G ++ G + Y + G ++D+ R G D+ K IH
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGT----ALVDMFWRCG---DIEKAIHVFEG 309
Query: 320 KP--DVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
P D ++W +++ H + A + +++ L
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 309/528 (58%), Gaps = 9/528 (1%)
Query: 8 LEEAQVVFDEMPERNVVS---WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
L+ A+ +FD++ + ++++ W M YS A+ + V ML + P F+ S
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 65 LRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
L+AC L D++ IH+ I+K + D V + L+ +Y + G +A VF M +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V WNS+I+ ++ E L++KM+ +TLT++L AC+ ++ L G++ H
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 182 VLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
+LK + D+ L N+L+DMY KCG +E ++ +F+ M+ KD+ SW+ M+ A NG E
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
+ LF+ M G P+ IT + +L CS GL + G F MK + + P EHY C++D
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
+LGRAGK+ + VK+I M KP W +LL++CR H NV + AAKE+ L+ + G
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGN 542
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK-SHPQIDE 418
YV++SN YA++KMW++V ++R M+ +G++KE GCSW++V +I F+ G DE
Sbjct: 543 YVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDE 602
Query: 419 ISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIR 478
+ + + +GY P+T+ VL D++ E + + + HSE+LA + ++ + IR
Sbjct: 603 YKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIR 662
Query: 479 VWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ KNLR+C DCH + K+++++ +R IV+RD R+HHF DG+CSC DYW
Sbjct: 663 ITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y++ L ++A+ VFD M ERNVV+W ++IS S L M E + + T
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+++L AC ++ + K+IH+ ILK + DV + ++L+D+Y K GE+ + VF M+
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
T D WN ++ +A + + +E + L++ M +G D T ++L C+ L E G
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 178 AHVHV---LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIAGLAQN 233
+ + L + L+D+ + G +++A + M K S W +++ +
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 234 G 234
G
Sbjct: 520 G 520
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 281/473 (59%), Gaps = 43/473 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +AQ VFDEM +RNVVSW ++I+ + A+ + ML V P+ T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVF--- 113
+SV+ AC LS IK ++H ++K L +D+ + +A +D+Y+K + EA +F
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 114 --------KEMVTG--------------------DRVVWNSIIAAFAQHSDGDEALYLYK 145
M++G + V WN++IA + Q+ + +EAL L+
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--------DQDLILHNALLD 197
++R + ++L+AC ++ L LG QAHVHVLK + D+ + N+L+D
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
MY KCG +E+ +F +M+ +D +SW+ MI G AQNG+ EAL+LF M G +P++IT
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 258 ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
++GVL AC HAG V++G HYF SM +G+ P R+HY CM+DLLGRAG L++ +I EM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 318 NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVA 377
+PD V W +LL AC+ HRN+ L Y A+++L+++ ++G YVLLSN YA W DV
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 378 EVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRL 430
VR++MR +G+ K+PGCSWI++ H F++ DKSHP+ +I L+ I+ +
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 192/370 (51%), Gaps = 43/370 (11%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
K L+EA +F MPER+ +W +M+S ++ + A+ M +EG + N ++F+
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 63 SVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
SVL AC L+D+ Q+HS I K SDV++ SAL+D+YSK G + +A VF EM
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ V WNS+I F Q+ EAL +++ M + D+ TL SV+ AC +S +++G++ H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 180 VHVLKFDQ---DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI--------------- 221
V+K D+ D+IL NA +DMY KC +++A+FIF+ M +++VI
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 222 ----------------SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
SW+ +IAG QNG + EAL LF +K P + + +L AC
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 266 SHAGLVDDGWH-YFRSMKNLYGIDPGREH----YGCMLDLLGRAGKLDDMVKLIHEMNCK 320
+ + G + +K+ + G E ++D+ + G +++ + +M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 321 PDVVTWRTLL 330
D V+W ++
Sbjct: 456 RDCVSWNAMI 465
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 34/244 (13%)
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYS-------------------------------K 102
++ +H+S++K G +++F+++ LID YS K
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 103 LGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV 162
LG L EA S+F+ M D+ WNS+++ FAQH +EAL + M + GF ++ + SV
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 163 LRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDV 220
L AC+G++ + G Q H + K F D+ + +AL+DMY KCG++ DA+ +F+ M ++V
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFR 279
+SW+++I QNG ++EAL +F M P+ +T+ V+ AC+ + G + R
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 280 SMKN 283
+KN
Sbjct: 279 VVKN 282
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/531 (36%), Positives = 303/531 (57%), Gaps = 7/531 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYS-SVKLNDRAMKLLVFMLREGVMPNMF 59
MY K+ + A+ +F+ M +RN+V+W MI Y+ + ++ D + + G+ P++
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 60 TFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
T ++L A L + IH ++ G + + +ALID+Y + G+L A +F M
Sbjct: 336 TSINLLPASAILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ + WNSIIAA+ Q+ AL L++++ + D +T+ S+L A L GR+ H
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIH 454
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
+++K + + I+ N+L+ MY CG LEDA+ FN +++KDV+SW+++I A +GF
Sbjct: 455 AYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGR 514
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
++ LF M PN T +L ACS +G+VD+GW YF SMK YGIDPG EHYGCM
Sbjct: 515 ISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM 574
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
LDL+GR G + + EM P W +LL+A R H+++ +A +AA++I K++ ++T
Sbjct: 575 LDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNT 634
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQID 417
G YVLL N YA + W DV ++ M KGI + S +E + H F GD+SH +
Sbjct: 635 GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATN 694
Query: 418 EISRQLNQFISRLTGAG--YVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
+I L+ +SR+ G YV + + + + R +S R HS +LA FG++S +
Sbjct: 695 KIYEVLD-VVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGR 753
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+ V N RIC CH F + ++L +R IV+ D +HHF +G CSCG+YW
Sbjct: 754 RVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 183/334 (54%), Gaps = 15/334 (4%)
Query: 7 LLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
L+E+A +FDEM + + W MI ++S L A++ M+ GV + FT+ V++
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 67 ACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
+ +S + K+IH+ ++K+G SDV+V ++LI +Y KLG +A VF+EM D V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
WNS+I+ + DG +L L+K+M + GF D+ + S L AC+ + ++G++ H H +
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 184 KF---DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+ D+++ ++LDMY K G + A+ IFN M+ +++++W+ MI A+NG +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 241 KLFDSMKVM-GPRPNYITILGVLFACS-HAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
F M G +P+ IT + +L A + G G+ R G P ++
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRR------GFLPHMVLETALI 372
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
D+ G G+L ++I + + +V++W +++ A
Sbjct: 373 DMYGECGQLKS-AEVIFDRMAEKNVISWNSIIAA 405
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 191/351 (54%), Gaps = 29/351 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNM 58
+Y+K +A+ VF+EMPER++VSW +MIS Y + L D L++F ML+ G P+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY--LALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLES-DVFVRSALIDVYSKLGELLEALSVFK 114
F+ S L AC ++ K+IH ++ +E+ DV V ++++D+YSK GE+ A +F
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLE 173
M+ + V WN +I +A++ +A ++KM + G D T ++L A ++LE
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS---AILE 348
Query: 174 LGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
GR H + ++ F ++L AL+DMY +CG L+ A+ IF+RM K+VISW+++IA
Sbjct: 349 -GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYF----RSMKNLY 285
QNG + AL+LF + P+ TI +L A + + + +G H + R N
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 286 GIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++ ++ + G L+D K + + K DVV+W +++ A H
Sbjct: 468 ILNS-------LVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH 510
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/463 (40%), Positives = 275/463 (59%), Gaps = 10/463 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L EA +FD +RN ++W+ M++ YS + A+KL M G+ P+ +T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
VL AC YL + KQ+HS +LK+G E +F +AL+D+Y+K G L +A F +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D +W S+I+ + Q+SD +EAL LY++M+ AG + T+ SVL+AC+ ++ LELG+Q
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H H +K F ++ + +AL MY KCGSLED +F R KDV+SW+ MI+GL+ NG
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL+LF+ M G P+ +T + ++ ACSH G V+ GW YF M + G+DP +HY
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+DLL RAG+L + + I N + WR LL AC+ H +L YA ++++ L +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
++ YV LS Y DV V + MR G+ KE GCSWIE+ Q H F++GD HP
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 416 IDEISRQLNQFISR-LTGAGYVP--DTNFVLQDLEGEQREDSL 455
I+E ++ L +SR + G+V D++FV ++ EG Q S
Sbjct: 685 IEE-TKDLVCLVSRQMIEEGFVTVLDSSFV-EEEEGTQLSTSF 725
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 20/345 (5%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYS---SVKLNDRAMKLLVFMLREGVMPNM 58
Y K L +A +F+ + ++VVSW ++I+ YS + + M+L M + ++PN
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
+T + + +A L +Q H+ ++K+ D++V ++L+ +Y K G + + L VF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQS--TLTSVLRACTGMSLLE 173
M + W+++++ +A +EA+ ++ R S T+VL + +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 174 LGRQAHVHVLKFDQDLI----LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
LGRQ +H + L+ L NAL+ MY KC SL +A +F+ ++ I+WS M+ G
Sbjct: 239 LGRQ--IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+QNG SLEA+KLF M G +P+ TI+GVL ACS +++G + L G +
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFER 355
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNC--KPDVVTWRTLLDA 332
++D+ +AG L D K +C + DV W +L+
Sbjct: 356 HLFATTALVDMYAKAGCLADARK---GFDCLQERDVALWTSLISG 397
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
+ +H I++ G + + + L++ Y+K G+L +A S+F ++ D V WNS+I ++Q+
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 135 ---SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ--DL 189
S + L+++MR + TL + +A + + +GRQAH V+K D+
Sbjct: 94 GGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI 153
Query: 190 ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM--- 246
+ +L+ MYCK G +ED +F M ++ +WSTM++G A G EA+K+F+
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 247 KVMGPRPNYI--TILGVLFACSHAGL 270
K G +Y+ +L L A + GL
Sbjct: 214 KEEGSDSDYVFTAVLSSLAATIYVGL 239
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 175 GRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
GR H +++ + N L++ Y KCG L A IFN ++ KDV+SW+++I G +Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 233 NG---FSLEALKLFDSMKVMGPRPNYITILGVLFACS--HAGLVDDGWHYFRSMKNLYG- 286
NG S ++LF M+ PN T+ G+ A S + V H + +G
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 287 --IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+D ++ + +AG ++D +K+ M + + TW T++ V+ A
Sbjct: 153 IYVDTS------LVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEA 203
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 296/529 (55%), Gaps = 8/529 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+ EA+ +F M +++VSWTTMIS Y L D+A+ M ++ V P+ T
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++VL AC L D+ ++H +K L S V V + LI++YSK + +AL +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + W SIIA ++ EAL ++M+ P + TLT+ L AC + L G++
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQP-NAITLTAALAACARIGALMCGKE 519
Query: 178 AHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H HVL+ L L NALLDMY +CG + A FN KDV SW+ ++ G ++ G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQ 578
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
++LFD M RP+ IT + +L CS + +V G YF M++ YG+ P +HY
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYA 637
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DLLGRAG+L + K I +M PD W LL+ACR H +DL +A+ I +LD +
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
G Y+LL N YA+ W +VA+VRR M+ G+ + GCSW+EV ++HAF+ DK HPQ
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEK 475
EI+ L F +++ G + D R++ HSE+ AI FG+++
Sbjct: 758 TKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGM 817
Query: 476 TIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGD 524
I V KNL +C +CH K I+K +R I +RD +HHF+DG CSCGD
Sbjct: 818 PIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 155/280 (55%), Gaps = 6/280 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-REGVMPNMF 59
M+V+F L +A VF +M ERN+ SW ++ Y+ D AM L ML GV P+++
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF VLR C + D+ K++H +++ G E D+ V +ALI +Y K G++ A +F M
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + WN++I+ + ++ E L L+ MR D TLTSV+ AC + LGR
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H +V+ F D+ + N+L MY GS +A+ +F+RM KD++SW+TMI+G N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
+A+ + M +P+ IT+ VL AC+ G +D G
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 17/339 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK ++ A+++FD MP R+++SW MIS Y + ++L M V P++ T
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+SV+ ACE L D + IH+ ++ G D+ V ++L +Y G EA +F M
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W ++I+ + + D+A+ Y+ M + D+ T+ +VL AC + L+ G +
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K +I+ N L++MY KC ++ A IF+ + K+VISW+++IAGL N
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG----WHYFRSMKNLYGIDPGR 291
EAL MK M +PN IT+ L AC+ G + G H R+ L P
Sbjct: 480 CFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-- 536
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+LD+ R G+++ + K DV +W LL
Sbjct: 537 ---NALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILL 570
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 32/311 (10%)
Query: 40 DRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLES----DVFVRSA 95
+ AMKLL M V + F +++R CE+ ++ S + + L S V + +A
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEW-KRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 96 LIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPA 154
+ ++ + G L++A VF +M + WN ++ +A+ DEA+ LY +M G
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIF 212
D T VLR C G+ L G++ HVHV+++ + D+ + NAL+ MY KCG ++ A+ +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS------ 266
+RM +D+ISW+ MI+G +NG E L+LF +M+ + P+ +T+ V+ AC
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 267 -----HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP 321
HA ++ G+ S+ N + + AG + KL M +
Sbjct: 315 LGRDIHAYVITTGFAVDISVCN------------SLTQMYLNAGSWREAEKLFSRME-RK 361
Query: 322 DVVTWRTLLDA 332
D+V+W T++
Sbjct: 362 DIVSWTTMISG 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 133/333 (39%), Gaps = 58/333 (17%)
Query: 138 DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL--ILHNAL 195
+EA+ L M+ D+ +++R C E G + + L L L NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 196 LDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK-VMGPRPN 254
L M+ + G+L DA ++F +M +++ SW+ ++ G A+ G+ EA+ L+ M V G +P+
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 255 YITILGVLFACS-----------HAGLVDDGWHY-----------------FRSMKNLYG 286
T VL C H +V G+ +S + L+
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 287 IDPGRE--HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACR--AHRNV 339
P R+ + M+ G + ++L M + PD++T +++ AC R +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 340 --DLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
D+ Y +D + L+ Y N+ W + ++ M K I SW
Sbjct: 316 GRDIHAYVITTGFAVDISVCNS---LTQMYLNAGSWREAEKLFSRMERKDI-----VSWT 367
Query: 398 EV----------DKQIHAFILGDKSHPQIDEIS 420
+ DK I + + D+ + DEI+
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 195/511 (38%), Positives = 293/511 (57%), Gaps = 9/511 (1%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHS 79
E ++ TT+I Y + A K+ M + PN+ +++V+ AC +D+
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ----PNLVAWNAVITACFRGNDVAGARE 193
Query: 80 SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDE 139
K+ L + + ++ Y K GEL A +F EM D V W+++I A + +E
Sbjct: 194 IFDKM-LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 140 ALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLIL--HNALLD 197
+ +++++RAG ++ +LT VL AC+ E G+ H V K I+ +NAL+D
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 198 MYCKCGSLEDAKFIFNRMVVKD-VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYI 256
MY +CG++ A+ +F M K ++SW++MIAGLA +G EA++LF+ M G P+ I
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 257 TILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHE 316
+ + +L ACSHAGL+++G YF MK +Y I+P EHYGCM+DL GR+GKL I +
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 317 MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
M P + WRTLL AC +H N++LA + + +LD ++G VLLSN YA + W DV
Sbjct: 433 MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDV 492
Query: 377 AEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTG-AGY 435
A +R++M V+ I+K S +EV K ++ F G+K E +L + I RL AGY
Sbjct: 493 ASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGY 552
Query: 436 VPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKL 495
P+ L D+E E++ED + HSEKLA+ F + K IR+ KNLRIC DCH KL
Sbjct: 553 TPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKL 612
Query: 496 IAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+K+ I++RD R+H F+DG CSC DYW
Sbjct: 613 TSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 152/330 (46%), Gaps = 56/330 (16%)
Query: 18 MPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFTFSSVLRACEYLSDIK- 75
PE + + T++ YS ++ + V M+R+G V P+ F+F+ V++A E ++
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 76 --QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
Q+H LK GLES +FV + LI +Y G + A VF EM + V WN++I A +
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHN 193
+D A ++ KM ++R T N
Sbjct: 185 GNDVAGAREIFDKM--------------LVRNHTSW-----------------------N 207
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRP 253
+L Y K G LE AK IF+ M +D +SWSTMI G+A NG E+ F ++ G P
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY------GCMLDLLGRAGKL 307
N +++ GVL ACS +G + G K L+G + ++D+ R G +
Sbjct: 268 NEVSLTGVLSACSQSGSFEFG-------KILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 308 DDMVKLIHE-MNCKPDVVTWRTLLDACRAH 336
M +L+ E M K +V+W +++ H
Sbjct: 321 -PMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K LE A+ +F EMP R+ VSW+TMI + + + + R G+ PN +
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ VL AC K +H + K G V V +ALID+YS+ G + A VF+ M
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 119 GDRVV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+V W S+IA A H G+EA+ L+ +M G D + S+L AC+ L+E G
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 178 AHVH---VLKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQN 233
V + ++ + ++D+Y + G L+ A FI + I W T++ + +
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 234 G 234
G
Sbjct: 453 G 453
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 157/391 (40%), Gaps = 45/391 (11%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSAL-----IDVYSKLGELLEALSVFKEMV 117
S+L +C+ L + QIH +K G+++D + L I + L L F E
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE-- 67
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGR 176
D ++N+++ +++ + ++ ++ +M R GF D + V++A L G
Sbjct: 68 -PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H LK + L + L+ MY CG +E A+ +F+ M ++++W+ +I +
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE-- 292
A ++FD M V + + G + AG ++ F M P R+
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYI----KAGELESAKRIFSEM-------PHRDDV 235
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
+ M+ + G ++ E+ P+ V+ +L AC + + +I
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-----KI 290
Query: 350 LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGC--SWIEVDKQIHAFI 407
L E G ++S A M++ V V +E C SW + I
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWT-------SMI 343
Query: 408 LGDKSHPQIDEISRQLNQFISRLTGAGYVPD 438
G H Q +E R N+ +T G PD
Sbjct: 344 AGLAMHGQGEEAVRLFNE----MTAYGVTPD 370
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/535 (36%), Positives = 300/535 (56%), Gaps = 16/535 (2%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP------NM 58
F L A +F +P+ W +I ++ A ML++ +
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 59 FTFSSVLRACEYL---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T S L+AC S + Q+H I + GL +D + + L+D YSK G+L+ A +F E
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M D WN++IA + EA+ LYK+M G + T+ + L AC+ + ++ G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 176 RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-VKDVISWSTMIAGLAQNG 234
H D ++I+ NA +DMY KCG ++ A +F + K V++W+TMI G A +G
Sbjct: 230 ENI-FHGYSND-NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG 287
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ AL++FD ++ G +P+ ++ L L AC HAGLV+ G F +M G++ +HY
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHY 346
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
GC++DLL RAG+L + +I M+ PD V W++LL A + +V++A A++EI ++
Sbjct: 347 GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGV 406
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
+ G +VLLSN YA W DV VR M K ++K PG S+IE IH F DKSH
Sbjct: 407 NNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHE 466
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIM---SF 471
Q EI ++++ ++ GYV T VL D+ E++E++L +HSEKLA+ +G+M
Sbjct: 467 QWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGA 526
Query: 472 PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
+E +RV NLRICGDCH+ K I+K+ +R I++RD +R+H F+DG CSC D+W
Sbjct: 527 DEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 129/284 (45%), Gaps = 15/284 (5%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALID--VYSKLGELLEALSVFKEMVTGD 120
++++ C S IKQ+ S L G F+RS L++ S G+L A+ +F+ +
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKM------RRAGFPADQSTLTSVLRACTGMSLLEL 174
WN+II FA S A Y+ M A D T + L+AC
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
Q H + + D +L LLD Y K G L A +F+ M V+DV SW+ +IAGL
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+ EA++L+ M+ G R + +T++ L ACSH G V +G + F N I
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS--- 244
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+D+ + G +D ++ + K VVTW T++ H
Sbjct: 245 --NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L A +FDEMP R+V SW +I+ S AM+L M EG+ + T
Sbjct: 154 YSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
+ L AC +L D+K+ +I +V V +A ID+YSK G + +A VF E TG +
Sbjct: 214 VAALGACSHLGDVKE-GENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVF-EQFTGKK 271
Query: 122 --VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA- 178
V WN++I FA H + AL ++ K+ G D + + L AC L+E G
Sbjct: 272 SVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVF 331
Query: 179 -HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM-VVKDVISWSTMIAG 229
++ ++++ + ++D+ + G L +A I M ++ D + W +++
Sbjct: 332 NNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/565 (35%), Positives = 318/565 (56%), Gaps = 52/565 (9%)
Query: 11 AQVVFDEMP--ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC 68
AQ +FDE+P E++ V WTT++S++S L +MKL V M R+ V + + + C
Sbjct: 62 AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC 121
Query: 69 EYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLG---------ELLEALSV---- 112
L D+ +Q H +K+G+ + V V +AL+D+Y K G E LE SV
Sbjct: 122 AKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWT 181
Query: 113 ------------------FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFP 153
F EM + V W ++A + E L L +M R G
Sbjct: 182 VVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHG 241
Query: 154 ADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ---------DLILHNALLDMYCKCGS 204
+ TL S+L AC L +GR HV+ LK + D+++ AL+DMY KCG+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 205 LEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
++ + +F M ++V++W+ + +GLA +G + +F M + +P+ +T VL A
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSA 360
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
CSH+G+VD+GW F S++ YG++P +HY CM+DLLGRAG +++ L+ EM P+ V
Sbjct: 361 CSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 325 TWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAE-VRRTM 383
+LL +C H V++A +E++++ +T +L+SN Y ++ +D+A+ +R ++
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYV-AEGRSDIADGLRGSL 478
Query: 384 RVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVL 443
R +GIRK PG S I V+ +H F GD+SHP+ EI +LN+ I R+ AGYVPD + ++
Sbjct: 479 RKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLV 538
Query: 444 QDLEG--EQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQ 501
EG E++E +L HSEKLA+ FG++ + V+KNLRIC DCH K+++K+
Sbjct: 539 SHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYD 598
Query: 502 RHIVIRDPIRYHHFRDGVCSCGDYW 526
R I+IRD R+H F+ G CSC DYW
Sbjct: 599 REIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ + VF M +RNVV+W + S + + + M+RE V P+ T
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLT 353
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
F++VL AC + + + S+ GLE V + ++D+ + G + EA + +EM
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Query: 117 VTGDRVVWNSIIAAFAQH 134
V + VV S++ + + H
Sbjct: 414 VPPNEVVLGSLLGSCSVH 431
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 276/503 (54%), Gaps = 43/503 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E A+ + + M +VVSW +MI L A+ + M + + FT
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 61 FSSVLRACEYLSDIK-----QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
S+L C LS + H I+K G + V +AL+D+Y+K G + AL VF+
Sbjct: 331 IPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M+ D + W +++ + DEAL L+ MR G D+ SVL A ++LLE G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+Q H + +K F L ++N+L+ MY KCGSLEDA IFN M ++D+I+W+ +I G A+N
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G L++D YF SM+ +YGI PG EH
Sbjct: 510 G-----------------------------------LLEDAQRYFDSMRTVYGITPGPEH 534
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y CM+DL GR+G + +L+H+M +PD W+ +L A R H N++ AAK +++L+
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELE 594
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
+ YV LSN Y+ + ++ A VRR M+ + I KEPGCSW+E ++H+F+ D+ H
Sbjct: 595 PNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRH 654
Query: 414 PQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPK 473
P++ EI ++++ + + AGY D +F L DL+ E +E L +HSEKLA+ FG++ P
Sbjct: 655 PRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPS 714
Query: 474 EKTIRVWKNLRICGDCHIFAKLI 496
IR+ KNLR+CGDCH KL+
Sbjct: 715 GAPIRIIKNLRVCGDCHSAMKLL 737
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 183/342 (53%), Gaps = 19/342 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMP-ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY + + EA+ +F+ M E+N V+WT+M++ YS +A++ + REG N +
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF SVL AC +S + Q+H I+K G +++++V+SALID+Y+K E+ A ++ + M
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL-- 174
D V WNS+I + EAL ++ +M D T+ S+L C +S E+
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKI 347
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
AH ++K + +++NAL+DMY K G ++ A +F M+ KDVISW+ ++ G
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW----HYFRSMKNLYGID 288
NG EALKLF +M+V G P+ I VL A + L++ G +Y +S G
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-----GFP 462
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++ + + G L+D + + M + D++TW L+
Sbjct: 463 SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLI 503
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 31/347 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y L +A+ +F P +N +SW +IS Y A L M +G+ PN +T
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV- 117
SVLR C L + +QIH +K G + DV V + L+ +Y++ + EA +F+ M
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V W S++ ++Q+ +A+ ++ +RR G ++Q T SVL AC +S +G Q
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K F ++ + +AL+DMY KC +E A+ + M V DV+SW++MI G + G
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVL--FACS----------HAGLVDDGWHYFRSMKN 283
EAL +F M + + TI +L FA S H +V G+ ++ + N
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + G +D +K+ M + DV++W L+
Sbjct: 369 ------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 27/261 (10%)
Query: 87 ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
E D F + +I YS L +A +F+ + + WN++I+ + + EA L+ +
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGS 204
M+ G ++ TL SVLR CT + LL G Q H H +K FD D+ + N LL MY +C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 205 LEDAKFIFNRMV-VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
+ +A+++F M K+ ++W++M+ G +QNGF+ +A++ F ++ G + N T VL
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 264 ACS-----------HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVK 312
AC+ H +V G+ N+Y ++D+ + +++
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFK-----TNIY-------VQSALIDMYAKCREMESARA 283
Query: 313 LIHEMNCKPDVVTWRTLLDAC 333
L+ M DVV+W +++ C
Sbjct: 284 LLEGMEVD-DVVSWNSMIVGC 303
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 271/467 (58%), Gaps = 28/467 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L EA VFDEM R+ VSW +I+A+ + L V MLR + P+ FT
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 61 FSSVLRACE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-- 116
F S+L+AC L +IHSSI+K G+ S+ V +LID+YSK G + EA +
Sbjct: 486 FGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 117 ---VTGDR---------------VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
V+G V WNSII+ + ++A L+ +M G D+ T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 159 LTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV 216
+VL C ++ LG+Q H V+K D+ + + L+DMY KCG L D++ +F + +
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 217 VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH 276
+D ++W+ MI G A +G EA++LF+ M + +PN++T + +L AC+H GL+D G
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 277 YFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
YF MK YG+DP HY M+D+LG++GK+ ++LI EM + D V WRTLL C H
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 337 R-NVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCS 395
R NV++A A +L+LD +D+ AY LLSN YA++ MW V+++RR MR ++KEPGCS
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 396 WIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFV 442
W+E+ ++H F++GDK+HP+ +EI +L S + D++FV
Sbjct: 846 WVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFV 889
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 185/337 (54%), Gaps = 9/337 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K N + +A F+ MP R+VVSW +M+S Y + +++++ V M REG+ + TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ +L+ C +L D QIH +++VG ++DV SAL+D+Y+K +E+L VF+ +
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V W++IIA Q++ AL +K+M++ QS SVLR+C +S L LG Q
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H H LK F D I+ A LDMY KC +++DA+ +F+ + S++ MI G +Q
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYG 295
+AL LF + G + I++ GV AC+ + +G Y ++K+ +D +
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+D+ G+ L + ++ EM + D V+W ++ A
Sbjct: 424 --IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 176/358 (49%), Gaps = 34/358 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +++AQ++FD N S+ MI+ YS + +A+ L ++ G+ + +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S V RAC + LS+ QI+ +K L DV V +A ID+Y K L EA VF EM
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN+IIAA Q+ G E L+L+ M R+ D+ T S+L+ACTG S L G +
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGME 503
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD---------------- 219
H ++K + + +L+DMY KCG +E+A+ I +R +
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 220 ----VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW 275
+SW+++I+G S +A LF M MG P+ T VL C++ G
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 276 H-YFRSMKNLYGIDPGREHYGC--MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ + +K D Y C ++D+ + G L D +L+ E + + D VTW ++
Sbjct: 624 QIHAQVIKKELQSDV----YICSTLVDMYSKCGDLHD-SRLMFEKSLRRDFVTWNAMI 676
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 144/275 (52%), Gaps = 5/275 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K E+ VF +PE+N VSW+ +I+ L A+K M + +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++SVLR+C LS+++ Q+H+ LK +D VR+A +D+Y+K + +A +F
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+R +N++I ++Q G +AL L+ ++ +G D+ +L+ V RAC + L G Q
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
+ +K D+ + NA +DMY KC +L +A +F+ M +D +SW+ +IA QNG
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
E L LF SM P+ T +L AC+ L
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 49 MLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLE 108
M+ G P F + +L+ D K+ L DV + +I+ YSK ++ +
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR-DVVSWNKMINGYSKSNDMFK 132
Query: 109 ALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTG 168
A S F M D V WNS+++ + Q+ + +++ ++ M R G D T +L+ C+
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 169 MSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTM 226
+ LG Q H V++ D D++ +ALLDMY K ++ +F + K+ +SWS +
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
IAG QN ALK F M+ + + VL +C+
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 157 STLTSVLRACTGMSLLELGRQAHVHV-----------------------------LKFDQ 187
+ + V + C LELG+QAH H+ + FD+
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 188 ----DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
D++ N +++ Y K + A FN M V+DV+SW++M++G QNG SL+++++F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
M G + T +L CS G + G D +LD+ +
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQ-IHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
+ + +++ + K + V+W ++ C + + LA KE+ K++A
Sbjct: 228 GKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 331 bits (848), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 284/532 (53%), Gaps = 38/532 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K L A++VFD M +N+V+W +++S S L A L++ M +EG+ P+ T
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
++S L Y+ LG+ +AL V +M
Sbjct: 329 WNS--------------------------------LASGYATLGKPEKALDVIGKMKEKG 356
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V + V W +I + +++ + AL ++ KM+ G + +T++++L+ +SLL G+
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 177 QAHVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H L+ + D + AL+DMY K G L+ A IF + K + SW+ M+ G A G
Sbjct: 417 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
E + F M G P+ IT VL C ++GLV +GW YF M++ YGI P EH
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
CM+DLLGR+G LD+ I M+ KPD W L +C+ HR+++LA A K + L+
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEP 596
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
++ Y+++ N Y+N W DV +R MR +R + SWI++D+ +H F K+HP
Sbjct: 597 HNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP 656
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
+I +L + +S + +GYVPDT+ + QD+ ++E L H+EKLA+ +G++
Sbjct: 657 DEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGL 716
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
IRV KN IC D H AK ++ L R IV+++ R HHFRDG CSC D W
Sbjct: 717 APIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 76/388 (19%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC-- 68
A +FDEMP+R+ ++W ++ ++A++L M G T +L+ C
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 69 -EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----------- 116
E ++ +QIH +L++GLES+V + ++LI +YS+ G+L + VF M
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 117 ------------------------VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGF 152
+ D V WNS+++ +A +A+ + K+M+ AG
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 153 PADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKF 210
S+++S+L+A L+LG+ H ++L+ D+ + L+DMY K G L A+
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
+F+ M K++++W+++++GL+ +A L M+ G +P+ IT
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT------------- 328
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ S+ + Y LG+ K D++ + E P+VV+W +
Sbjct: 329 -------WNSLASGYAT-------------LGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTG 358
C + N A K +K+ E G
Sbjct: 369 SGCSKNGNF---RNALKVFIKMQEEGVG 393
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 158/322 (49%), Gaps = 12/322 (3%)
Query: 77 IHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
IH ++K GL+ SD V SA + Y + L A +F EM D + WN I+ +
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 136 DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHN 193
+ ++A+ L+++M+ +G A ST+ +L+ C+ GRQ H +VL+ + ++ + N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRP 253
+L+ MY + G LE ++ +FN M +++ SW+++++ + G+ +A+ L D M++ G +P
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKL 313
+ +T +L + GL D + M+ + G+ P +L + G L + K
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVAEPGHL-KLGKA 246
Query: 314 IHEMNCKP----DVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYAN 369
IH + DV TL+D + YA +DA++ A+ L + +
Sbjct: 247 IHGYILRNQLWYDVYVETTLID---MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 370 SKMWNDVAEVRRTMRVKGIRKE 391
+ + D + M +GI+ +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPD 325
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 42/532 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
MY K L+ A VF+E P+R +++ W +I+ Y K D M +F MP
Sbjct: 170 MYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK--DMHMATTLFR----SMP 223
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
E + S LI Y GEL A +F+ M
Sbjct: 224 ------------------------------ERNSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V W ++I F+Q D + A+ Y +M G ++ T+ +VL AC+ L G
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGI 313
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H ++L D + AL+DMY KCG L+ A +F+ M KD++SW+ MI G A +G
Sbjct: 314 RIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHG 373
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+A++ F M G +P+ + L VL AC ++ VD G ++F SM+ Y I+P +HY
Sbjct: 374 RFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHY 433
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
++DLLGRAGKL++ +L+ M PD+ TW L AC+AH+ A ++ +L+LD
Sbjct: 434 VLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDP 493
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
E G+Y+ L T+A+ DV + R +++ + + G S+IE+D Q++ F GD SH
Sbjct: 494 ELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHK 553
Query: 415 QIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKE 474
EI +L++ IS GY P ++ + D+E E++E+ HSEKLA+ G +
Sbjct: 554 LTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPG 613
Query: 475 KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
TIR+ KNLRICGDCH K ++K+ QR I++RD ++HHF+DG CSCGDYW
Sbjct: 614 TTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/440 (39%), Positives = 266/440 (60%), Gaps = 9/440 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLN---DRAMKLLVFMLREGVMPN 57
MY K + L +A+ VFD +VV + MI YS + A+ + M + P+
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 58 MFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ TF S+LRA L+ + KQIH + K GL D+F SALIDVYS L ++ VF
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
EM D V+WNS+ A + Q S+ +EAL L+ +++ + D+ T +++ A ++ ++L
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G++ H +LK + + + NALLDMY KCGS EDA F+ +DV+ W+++I+ A
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+G +AL++ + M G PNYIT +GVL ACSHAGLV+DG F M +GI+P E
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETE 692
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
HY CM+ LLGRAG+L+ +LI +M KP + WR+LL C NV+LA +AA+ +
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
D +D+G++ +LSN YA+ MW + +VR M+V+G+ KEPG SWI ++K++H F+ DKS
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKS 812
Query: 413 HPQIDEISRQLNQFISRLTG 432
H + ++I L+ + ++ G
Sbjct: 813 HCKANQIYEVLDDLLVQIRG 832
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 175/338 (51%), Gaps = 12/338 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K ++ A++VFD +PE++ V+WTTMIS + + +++L ++ + V+P+ +
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 62 SSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+VL AC +L KQIH+ IL+ GLE D + + LID Y K G ++ A +F M
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ + W ++++ + Q++ EA+ L+ M + G D +S+L +C + L G Q
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + +K D + N+L+DMY KC L DA+ +F+ DV+ ++ MI G ++ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 237 L---EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW-HYFRSMKNLYGIDPGRE 292
EAL +F M+ RP+ +T + +L A A L G + YG++
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ L D + EM K D+V W ++
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 177/344 (51%), Gaps = 18/344 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKL-LVFMLREGVMPNMF 59
+Y + + A+ VF++MPERN+VSW+TM+SA + + + ++ + L F PN +
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 60 TFSSVLRACEYLSD-----IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
SS ++AC L + Q+ S ++K G + DV+V + LID Y K G + A VF
Sbjct: 148 ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
+ V W ++I+ + +L L+ ++ D L++VL AC+ + LE
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 175 GRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G+Q H H+L++ + D L N L+D Y KCG + A +FN M K++ISW+T+++G Q
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACS--HAGLVDDGWHYFRSMKNLYGIDPG 290
N EA++LF SM G +P+ +L +C+ HA H + NL G
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL-----G 382
Query: 291 REHY--GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ Y ++D+ + L D K + ++ DVV + +++
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARK-VFDIFAAADVVLFNAMIEG 425
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 150/290 (51%), Gaps = 19/290 (6%)
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
+H I+ GLE D ++ + LI++YS+ G ++ A VF++M + V W+++++A H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 137 GDEALYLYKKMRRAGFPA-DQSTLTSVLRACTGMS----LLELGRQAHVHVLKFDQDLIL 191
+E+L ++ + R + ++ L+S ++AC+G+ + Q+ + FD+D+ +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
L+D Y K G+++ A+ +F+ + K ++W+TMI+G + G S +L+LF +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 252 RPNYITILGVLFACSHAGLVDDG----WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
P+ + VL ACS ++ G H R YG++ ++D + G++
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILR-----YGLEMDASLMNVLIDSYVKCGRV 300
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDACRAH----RNVDLATYAAKEILKLD 353
KL + M K ++++W TLL + + ++L T +K LK D
Sbjct: 301 IAAHKLFNGMPNK-NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 259/436 (59%), Gaps = 6/436 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + L A+ VFD++ + SW +I+ ++ D A+ + M G +P+ +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
S+L A LS QIHS I+K G +D+ V ++L+ +Y+ +L ++F++
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN+I+ A QH E L L+K M + D T+ ++LR C +S L+LG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H + LK + + N L+DMY KCGSL A+ IF+ M +DV+SWST+I G AQ+G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
F EAL LF MK G PN++T +GVL ACSH GLV++G + +M+ +GI P +EH
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++DLL RAG+L++ + I EM +PDVV W+TLL AC+ NV LA AA+ ILK+D
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
++ A+VLL + +A+S W + A +R +M+ ++K PG SWIE++ +IH F D HP
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 415 QIDEISRQLNQFISRL 430
+ D+I L+ S++
Sbjct: 734 ERDDIYTVLHNIWSQM 749
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 181/343 (52%), Gaps = 7/343 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L +A+ VFD MPERN+VS+T++I+ YS A++L + ML+E ++P+ F
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F S+++AC SD+ KQ+H+ ++K+ S + ++ALI +Y + ++ +A VF +
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGR 176
D + W+SIIA F+Q EAL K+M G F ++ S L+AC+ + + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 177 QAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H +K + + I +L DMY +CG L A+ +F+++ D SW+ +IAGLA NG
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
++ EA+ +F M+ G P+ I++ +L A + + G S +G
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVC 409
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHR 337
+L + L L + D V+W T+L AC H
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 11/338 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM-PNMF 59
MYV+FN + +A VF +P ++++SW+++I+ +S + A+ L ML GV PN +
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 60 TFSSVLRACEYL--SDI-KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F S L+AC L D QIH +K L + +L D+Y++ G L A VF ++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D WN IIA A + DEA+ ++ +MR +GF D +L S+L A T L G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQN 233
Q H +++K F DL + N+LL MY C L +F D +SW+T++ Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGRE 292
+E L+LF M V P++IT+ +L C + G + S+K G+ P +
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT--GLAPEQF 509
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + G L ++ M+ + DVV+W TL+
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 20/283 (7%)
Query: 60 TFSSVLRACEY---LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ S++ AC L+ ++IH IL + D + + ++ +Y K G L +A VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V + S+I ++Q+ G EA+ LY KM + DQ S+++AC S + LG+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 177 QAHVHVLKFDQD--LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H V+K + LI NAL+ MY + + DA +F + +KD+ISWS++IAG +Q G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 235 FSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID----- 288
F EAL M G PN L ACS D G ++G+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG-------SQIHGLCIKSEL 301
Query: 289 PGREHYGCML-DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G GC L D+ R G L+ ++ ++ +PD +W ++
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVII 343
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 148 RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSL 205
+ + F T S++ AC+ L GR+ H H+L + D IL+N +L MY KCGSL
Sbjct: 59 KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 118
Query: 206 EDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
DA+ +F+ M ++++S++++I G +QNG EA++L+ M P+ ++ AC
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 266 SHAGLVDDG 274
+ + V G
Sbjct: 179 ASSSDVGLG 187
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 247/436 (56%), Gaps = 10/436 (2%)
Query: 96 LIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR-AGFPA 154
+I+ K+GE A V + + + WN +I + ++ +EAL K M
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL----ILHNALLDMYCKCGSLEDAKF 210
++ + S L AC L +L VH L D + IL +AL+D+Y KCG + ++
Sbjct: 164 NKFSFASSLAACA--RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
+F + DV W+ MI G A +G + EA+++F M+ P+ IT LG+L CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+++G YF M + I P EHYG M+DLLGRAG++ + +LI M +PDVV WR+LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
+ R ++N +L A I L +G YVLLSN Y+++K W +VR M +GIRK
Sbjct: 342 SSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 391 EPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQ 450
G SW+E IH F GD SH + I + L I + G+V DT+ VL D+ E+
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEE 458
Query: 451 REDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPI 510
+E++L +HSEKLA+ + I+ IR+ KN+R+C DCH + K ++KL R I++RD I
Sbjct: 459 KEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRI 518
Query: 511 RYHHFRDGVCSCGDYW 526
R+H F DG+CSC DYW
Sbjct: 519 RFHRFEDGLCSCRDYW 534
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 8/226 (3%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFTFSSVLRACE 69
A+ V ++NV++W MI Y + A+K L ML + PN F+F+S L AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 70 YLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
L D+ K +HS ++ G+E + + SAL+DVY+K G++ + VF + D +WN+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH---VHVL 183
+I FA H EA+ ++ +M D T +L C+ LLE G++
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIA 228
L + A++D+ + G +++A + M ++ DV+ W ++++
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 269/447 (60%), Gaps = 8/447 (1%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+E A ++F ++ +N V+WTT+I+ ++ + +K+ ML E + + +RA
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 68 CEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
+ + KQIH+S++K G +S++ V ++++D+Y + G L EA F EM D + W
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
N++I+ + SD EAL ++++ GF + T TS++ AC ++ L G+Q H + +
Sbjct: 283 NTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-VKDVISWSTMIAGLAQNGFSLEALK 241
F++++ L NAL+DMY KCG++ D++ +F +V ++++SW++M+ G +G+ EA++
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
LFD M G RP+ I + VL AC HAGLV+ G YF M++ YGI+P R+ Y C++DLL
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHR-NVDLATYAAKEILKLDAEDTGAY 360
GRAGK+ + +L+ M KPD TW +L AC+AH+ N ++ AA+++++L + G Y
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTY 521
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEIS 420
V+LS YA W D A VR+ MR+ G +KE G SWI V+ Q+ +F + DK P +
Sbjct: 522 VMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVY 581
Query: 421 RQLNQFISRLTGAGYVPDTNFVLQDLE 447
L I AGYVP+ + ++ D E
Sbjct: 582 SVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 191/345 (55%), Gaps = 16/345 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + L+EEA+ +FDEMP+R+VV+WT MI+ Y+S N RA + M+++G PN FT
Sbjct: 55 YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTL 114
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALS-VFKEMV 117
SSVL++C + + +H ++K+G+E ++V +A++++Y+ +EA +F+++
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V W ++I F DG L +YK+M +T +RA + + G+Q
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V+K F +L + N++LD+YC+CG L +AK F+ M KD+I+W+T+I+ L ++
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS 294
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHY----FRSMKNLYGIDPGR 291
S EAL +F + G PN T ++ AC++ ++ G FR G +
Sbjct: 295 S-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-----GFNKNV 348
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
E ++D+ + G + D ++ E+ + ++V+W +++ +H
Sbjct: 349 ELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 134/242 (55%), Gaps = 19/242 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE--GVMPNM 58
+Y + L EA+ F EM ++++++W T+I S ++ +D + LL+F E G +PN
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLI---SELERSDSSEALLMFQRFESQGFVPNC 313
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
+TF+S++ AC ++ + +Q+H I + G +V + +ALID+Y+K G + ++ VF E
Sbjct: 314 YTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 116 MVTGDR---VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
+V DR V W S++ + H G EA+ L+ KM +G D+ +VL AC L+
Sbjct: 374 IV--DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLV 431
Query: 173 ELGRQAHVHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMI 227
E G + + +V++ + D ++N ++D+ + G + +A + RM K D +W ++
Sbjct: 432 EKGLK-YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Query: 228 AG 229
Sbjct: 491 GA 492
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 96 LIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPAD 155
LI Y + G + EA S+F EM D V W ++I +A + A + +M + G +
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCG-SLEDAKFIF 212
+ TL+SVL++C M +L G H V+K + L + NA+++MY C ++E A IF
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
+ VK+ ++W+T+I G G + LK++ M + I + A + V
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVT 230
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD 331
G S+ G +LDL R G L + HEM K D++TW TL+
Sbjct: 231 TGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLIS 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY K + ++Q VF E+ +R N+VSWT+M+ Y S A++L M+ G+ P+
Sbjct: 357 MYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRI 416
Query: 60 TFSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
F +VL AC + +K + + G+ D + + ++D+ + G++ EA + +
Sbjct: 417 VFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVER 476
Query: 116 M-VTGDRVVWNSIIAAFAQH 134
M D W +I+ A H
Sbjct: 477 MPFKPDESTWGAILGACKAH 496
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 190 ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVM 249
IL L+ Y + G +E+A+ +F+ M +DV++W+ MI G A + ++ A + F M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 250 GPRPNYITILGVLFAC 265
G PN T+ VL +C
Sbjct: 106 GTSPNEFTLSSVLKSC 121
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 260/433 (60%), Gaps = 5/433 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + +++ +F+ M ER+VVSWT++I AY + +A++ + M V PN T
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+S+ AC LS + +Q+H ++L +GL + V ++++ +YS G L+ A +F+ M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + W++II + Q G+E + MR++G L S+L M+++E GRQ
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Query: 178 AHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H L F +Q+ + ++L++MY KCGS+++A IF D++S + MI G A++G
Sbjct: 433 VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGK 492
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
S EA+ LF+ +G RP+ +T + VL AC+H+G +D G+HYF M+ Y + P +EHYG
Sbjct: 493 SKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG 552
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+DLL RAG+L D K+I+EM+ K D V W TLL AC+A +++ AA+ IL+LD
Sbjct: 553 CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPT 612
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
A V L+N Y+++ + A VR+ M+ KG+ KEPG S I++ + AF+ GD+ HPQ
Sbjct: 613 CATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQ 672
Query: 416 IDEISRQLNQFIS 428
++I L +S
Sbjct: 673 SEDIYNILELAVS 685
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 40/381 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + ++++ VF EMP RN V+WT +I+ + M R + + +T
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ L+AC L + K IH+ ++ G + + V ++L +Y++ GE+ + L +F+ M
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W S+I A+ + +A+ + KMR + P ++ T S+ AC +S L G Q
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +VL + L + N+++ MY CG+L A +F M +D+ISWST+I G Q GF
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
E K F M+ G +P + +L + +++ G ++ +G++
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRS 450
Query: 296 CMLDLLGRAGKL------------DDMVKLIHEMNC----------------------KP 321
++++ + G + DD+V L +N +P
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 322 DVVTWRTLLDACRAHRNVDLA 342
D VT+ ++L AC +DL
Sbjct: 511 DSVTFISVLTACTHSGQLDLG 531
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 171/336 (50%), Gaps = 10/336 (2%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM--LREGVMPNMFTFSSVL 65
L A+ VFD+MP ++VSWT++I Y + +D A+ L M + V P+ S VL
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 66 RACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
+AC S+I + +H+ +K L S V+V S+L+D+Y ++G++ ++ VF EM + V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
W +II E L + +M R+ +D T L+AC G+ ++ G+ H HV
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 183 L--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+ F L + N+L MY +CG ++D +F M +DV+SW+++I + G ++A+
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
+ F M+ PN T + AC+ + G ++ +L G++ M+ +
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL-GLNDSLSVSNSMMKM 354
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA-CRA 335
G L L M C+ D+++W T++ C+A
Sbjct: 355 YSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQA 389
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 104 GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA--GFPADQSTLTS 161
G L A VF +M GD V W SII + ++ DEAL L+ MR D S L+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 162 VLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD 219
VL+AC S + G H + +K + + ++LLDMY + G ++ + +F+ M ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 220 VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFR 279
++W+ +I GL G E L F M + T L AC AGL Y +
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC--AGLRQ--VKYGK 229
Query: 280 SMKNLYGIDPGREHYGCMLDLLG----RAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + + I G C+ + L G++ D + L M+ + DVV+W +L+ A
Sbjct: 230 AI-HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVA 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 161 SVLRACT-GMSLLE------LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFN 213
++ R CT +SLL+ + R ++ ++KFD N+ L G+L A+ +F+
Sbjct: 10 TIQRFCTTSISLLQKPVEENIVRISNQVMVKFDP-----NSHLRSLINAGNLRAARQVFD 64
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVM--GPRPNYITILGVLFACSHAGLV 271
+M D++SW+++I S EAL LF +M+V+ P+ + VL AC + +
Sbjct: 65 KMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNI 124
Query: 272 DDGWH---YFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRT 328
G Y L + G +LD+ R GK+D ++ EM + + VTW
Sbjct: 125 AYGESLHAYAVKTSLLSSVYVGSS----LLDMYKRVGKIDKSCRVFSEMPFR-NAVTWTA 179
Query: 329 LL 330
++
Sbjct: 180 II 181
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 264/458 (57%), Gaps = 16/458 (3%)
Query: 2 YVKFNLLEEAQVVFDEMP--ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
Y K L+ A++VF+ + +R VVSW +M AYS A L MLRE P++
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF ++ +C E L+ + IHS + +G + D+ + I +YSK + A +F M
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V W +I+ +A+ D DEAL L+ M ++G D TL S++ C LE G+
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 177 ----QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
+A ++ K D +I NAL+DMY KCGS+ +A+ IF+ K V++W+TMIAG A
Sbjct: 378 WIDARADIYGCKRDNVMIC-NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
NG LEALKLF M + +PN+IT L VL AC+H+G ++ GW YF MK +Y I PG +
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
HY CM+DLLGR GKL++ ++LI M+ KPD W LL+AC+ HRNV +A AA+ + L
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNL 556
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
+ + YV ++N YA + MW+ A +R M+ + I+K PG S I+V+ + H+F +G+
Sbjct: 557 EPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHG 616
Query: 413 HPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQ 450
H + + I LN + + D + + +D+ EQ
Sbjct: 617 HVENEVIYFTLNGL------SLFAKDKHVLYKDVYKEQ 648
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 30/348 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M+VK N ++ A VF+ MPER+ +W M+S + D+A L M + P+ T
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+++++ + +K +H+ +++G++ V V + I Y K G+L A VF+ +
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 118 TGDRVV--WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
GDR V WNS+ A++ + +A LY M R F D ST ++ +C L G
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 176 RQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
R H H + DQD+ N + MY K A+ +F+ M + +SW+ MI+G A+
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG-WHYFRSMKNLYGIDPGRE 292
G EAL LF +M G +P+ +T+L ++ C G ++ G W ID +
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW-----------IDARAD 384
Query: 293 HYGC----------MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
YGC ++D+ + G + + + I + + VVTW T++
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHE-ARDIFDNTPEKTVVTWTTMI 431
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 44/354 (12%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNMFTFSSVLRACEYLSDI---KQ 76
+V +W I +V ND LL+F M R G PN FTF V +AC L+D+ +
Sbjct: 16 SVNAWNLQIR--EAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSD 136
+H+ ++K SDVFV +A +D++ K + A VF+ M D WN++++ F Q
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 137 GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLILHNA 194
D+A L+++MR D T+ +++++ + L+L H ++ D + + N
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 195 LLDMYCKCGSLEDAKFIFNRMVVKD--VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPR 252
+ Y KCG L+ AK +F + D V+SW++M + G + +A L+ M +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 253 PNYITILGVLFACSHAGLVDDG------------------WHYFRSMKN----------L 284
P+ T + + +C + + G + F SM + L
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 285 YGIDPGRE--HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDAC 333
+ I R + M+ G +D+ + L H M KPD+VT +L+ C
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K A+++FD M R VSWT MIS Y+ D A+ L M++ G P++ T
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESD-VFVRSALIDVYSKLGELLEALSVFKEM 116
S++ C + K I + G + D V + +ALID+YSK G + EA +F
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V W ++IA +A + EAL L+ KM + + T +VL+AC LE G
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 177 QAHVHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMI 227
+ + H++K L ++ ++D+ + G LE+A + M K D W ++
Sbjct: 480 E-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + EA+ +FD PE+ VV+WTTMI+ Y+ + A+KL M+ PN T
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Query: 61 FSSVLRAC----------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
F +VL+AC EY +KQ+++ + GL+ S ++D+ + G+L EAL
Sbjct: 462 FLAVLQACAHSGSLEKGWEYFHIMKQVYN--ISPGLDH----YSCMVDLLGRKGKLEEAL 515
Query: 111 SVFKEM-VTGDRVVWNSIIAAFAQHSD 136
+ + M D +W +++ A H +
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRN 542
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 293/540 (54%), Gaps = 30/540 (5%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE 69
EA VF+ + +N+V+W +MI+A+ L +A+ + + M +GV F +++L C
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVG---FDRATLLNICS 269
Query: 70 YL---SDIK---------QIHSSILKVGLESDVFVRSALIDVYSKLGE-LLEALSVFKEM 116
L SD+ Q+HS +K GL + V +ALI VYS++ E + +F EM
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 117 V-TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D V WN II AFA + D + A++L+ ++R+ D T +SVL+AC G+
Sbjct: 330 SHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA 388
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
H V+K F D +L+N+L+ Y KCGSL+ +F+ M +DV+SW++M+ + +
Sbjct: 389 LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLH 448
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G L +F M + P+ T + +L ACSHAG V++G FRSM P H
Sbjct: 449 GQVDSILPVFQKMDI---NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL- 352
Y C++D+L RA + + ++I +M PD V W LL +CR H N L AA ++ +L
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELV 565
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
+ ++ +Y+ +SN Y +N+ + M +RKEP SW E+ ++H F G +
Sbjct: 566 EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRH 625
Query: 413 HPQIDEISRQLNQFISRLTGAGYVPDTNFV-LQDLEGEQREDSLRHHSEKLAIVFGIMSF 471
P + + R+L + IS L GYVP+ + EQ ED+L HHSEKLA+ F +M
Sbjct: 626 RPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEG 685
Query: 472 PKE-----KTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
K I++ KN RIC DCH F KL +KL + I++RD R+HHF+D CSC DYW
Sbjct: 686 RKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 169/366 (46%), Gaps = 44/366 (12%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A+ VFD MPERNVVSWT +I+ Y L ML PN FT
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFT 163
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKL---GELLEALSVFKEMV 117
SSVL +C Y KQ+H LK+GL ++V +A+I +Y + EA +VF+ +
Sbjct: 164 LSSVLTSCRYEPG-KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL---EL 174
+ V WNS+IAAF + G +A+ ++ +M G D++TL ++ + S L E+
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 175 GRQA-HVHVLKFDQDLILH----NALLDMYCKCGSLED----AKFIFNRMVVKDVISWST 225
+ +H L L+ AL+ +Y + LED K +D+++W+
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNG 340
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS-----------HAGLVDDG 274
+I A A+ LF ++ P++ T VL AC+ HA ++ G
Sbjct: 341 IITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGG 399
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACR 334
+ + N ++ + G LD +++ +M+ + DVV+W ++L A
Sbjct: 400 FLADTVLNN------------SLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYS 446
Query: 335 AHRNVD 340
H VD
Sbjct: 447 LHGQVD 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 89 DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR 148
+V + + LI++Y+K G +L A VF M + V W ++I + Q + E L+ M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ--DLILHNALLDMYCKC---G 203
FP ++ TL+SVL +C E G+Q H LK + + NA++ MY +C
Sbjct: 155 SHCFP-NEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
+ +A +F + K++++W++MIA +A+ +F M G + T+L +
Sbjct: 210 AAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLK----FDQDLILHNALLDMYCKCGSLEDAKF 210
Q ++ +AC L G H H+L + Q++IL N L++MY KCG++ A+
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQ 117
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
+F+ M ++V+SW+ +I G Q G E LF SM + PN T+ VL +C +
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY 173
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 293/538 (54%), Gaps = 15/538 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+ F +++ A +F + E+N +++ +++ + +A+KL ML+ GV F+
Sbjct: 361 YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSL 420
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+S + AC +S+ K QIH +K G + +++AL+D+ ++ + +A +F + +
Sbjct: 421 TSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS 480
Query: 119 G--DRVVWNSIIAAFAQHSDGDEALYLY-KKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
SII +A++ D+A+ L+ + + D+ +LT +L C + E+G
Sbjct: 481 NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG--LA 231
Q H + LK + D+ L N+L+ MY KC +DA IFN M DVISW+++I+ L
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVL--FACSHAGLVDDGWHYFRSMKNLYGIDP 289
+NG EAL L+ M +P+ IT+ V+ F + + + F SMK +Y I+P
Sbjct: 601 RNGD--EALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEP 658
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
EHY + +LG G L++ I+ M +P+V R LLD+CR H N +A AK I
Sbjct: 659 TTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLI 718
Query: 350 LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILG 409
L E Y+L SN Y+ S W+ +R MR +G RK P SWI + +IH+F
Sbjct: 719 LSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHAR 778
Query: 410 DKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIM 469
D SHPQ +I R L I GY P+T +VLQ+++ ++ L HHS KLA+ +GI+
Sbjct: 779 DTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGIL 838
Query: 470 SF-PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
S + K +RV KN+ +CGDCH F K I+ + +R IV+RD +HHF +G CSC D W
Sbjct: 839 SSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 202/453 (44%), Gaps = 74/453 (16%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFT 60
Y+K EA +VF + VVS+T +IS +S + L A+K+ M + G V PN +T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSK--LGELLEALSVFKE 115
F ++L AC +S QIH I+K G + VFV ++L+ +Y K + L +F E
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLEL 174
+ D WN+++++ + +A L+ +M R GF D TL+++L +CT S+L
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 175 GRQAHVHVLKFD--QDLILHNALLDMYCK------------------------------- 201
GR+ H ++ Q+L ++NAL+ Y K
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 202 CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
G ++ A IF + K+ I+++ ++AG +NG L+ALKLF M G ++
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYG--IDPGREHYGC----MLDLLGRAGKLDDMVKLIH 315
+ AC GLV + + + ++G I G C +LD+ R ++ D ++
Sbjct: 424 VDAC---GLVSEK----KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 316 EMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWND 375
+ W + LD+ +A ++ + YA + A L T K++ D
Sbjct: 477 Q---------WPSNLDSSKATTSI-IGGYARNGL------PDKAVSLFHRTLCEQKLFLD 520
Query: 376 VAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFIL 408
+ + V G + E+ QIH + L
Sbjct: 521 EVSLTLILAVCGT-----LGFREMGYQIHCYAL 548
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 178/370 (48%), Gaps = 44/370 (11%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFTFSSVLRACEYLS 72
+FDE+P+R+V SW T++S+ + +A L M R EG + FT S++L +C S
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 73 DI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV-----------FKEMVT 118
+ +++H +++GL ++ V +ALI YSK ++ + S+ F EM+T
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 119 G--------------------DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
+ + +N+++A F ++ G +AL L+ M + G +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 159 LTSVLRACTGMSLLELGRQAHVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMV 216
LTS + AC +S ++ Q H +KF + + ALLDM +C + DA+ +F++
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 217 --VKDVISWSTMIAGLAQNGFSLEALKLFD-SMKVMGPRPNYITILGVLFACSHAGLVDD 273
+ + +++I G A+NG +A+ LF ++ + +++ +L C G +
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 274 GWH-YFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G+ + ++K Y D + ++ + + DD +K+ + M + DV++W +L+
Sbjct: 540 GYQIHCYALKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISC 596
Query: 333 CRAHRNVDLA 342
RN D A
Sbjct: 597 YILQRNGDEA 606
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 19/279 (6%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
K +H+S LK+ E + +ALI Y KLG EA+ VF + + V + ++I+ F++
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 135 SDGDEALYLYKKMRRAGF-PADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLIL 191
+ EAL ++ +MR+AG ++ T ++L AC +S LG Q H ++K F + +
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 192 HNALLDMYCK--CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KV 248
N+L+ +Y K S +D +F+ + +DV SW+T+++ L + G S +A LF M +V
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG--IDPG-REHYGCMLDLLGRAG 305
G + T+ +L +C+ + ++ G + L+G I G + L+G
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRG-------RELHGRAIRIGLMQELSVNNALIGFYS 331
Query: 306 KLDDMVKL--IHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
K DM K+ ++EM D VT+ ++ A + VD A
Sbjct: 332 KFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSA 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 36/191 (18%)
Query: 172 LELGRQAHVHVLKFDQDLI-LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
+E+ + H LK ++ L NAL+ Y K G +A +F + V+S++ +I+G
Sbjct: 96 VEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGF 155
Query: 231 AQNGFSLEALKLFDSMKVMG-PRPNYITILGVLFACS-----------HAGLVDDGW--- 275
++ +EALK+F M+ G +PN T + +L AC H +V G+
Sbjct: 156 SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS 215
Query: 276 -HYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC- 333
S+ +LY D G DD++KL E+ + DV +W T++ +
Sbjct: 216 VFVSNSLMSLYDKDSG--------------SSCDDVLKLFDEIP-QRDVASWNTVVSSLV 260
Query: 334 ---RAHRNVDL 341
++H+ DL
Sbjct: 261 KEGKSHKAFDL 271
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 257/446 (57%), Gaps = 34/446 (7%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSD 73
VF + NV +T MI + S + + L M+ V+P+ + +SVL+AC+ L
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD-LKV 141
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYSKLGELL-------------------------- 107
++IH+ +LK+G S V ++++Y K GEL+
Sbjct: 142 CREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 201
Query: 108 -----EALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV 162
EAL +F+++ D V W ++I ++ + ++AL L+++M+ A++ T V
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 163 LRACTGMSLLELGRQAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDV 220
L AC+ + LELGR H V +L + NAL++MY +CG + +A+ +F M KDV
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS 280
IS++TMI+GLA +G S+EA+ F M G RPN +T++ +L ACSH GL+D G F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 281 MKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVD 340
MK ++ ++P EHYGC++DLLGR G+L++ + I + +PD + TLL AC+ H N++
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 341 LATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVD 400
L AK + + + D+G YVLLSN YA+S W + E+R +MR GI KEPGCS IEVD
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 401 KQIHAFILGDKSHPQIDEISRQLNQF 426
QIH F++GD +HP + I ++L +
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 47/309 (15%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSS-------------VKLND------- 40
+Y K L A+ +FDEMP+R+ V+ T MI+ YS VK+ D
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 41 -----------RAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSILKVGL 86
+A++L M E V N FT VL AC L + + +HS + +
Sbjct: 227 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 286
Query: 87 ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
E FV +ALI++YS+ G++ EA VF+ M D + +N++I+ A H EA+ ++
Sbjct: 287 ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRD 346
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQ---AHVHVLKFDQDLILHNALLDMYCKCG 203
M GF +Q TL ++L AC+ LL++G + + V + + + ++D+ + G
Sbjct: 347 MVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVG 406
Query: 204 SLEDA-KFIFNRMVVKDVISWSTMIAGLAQNGFSLE-----ALKLFDSMKVMGPRPNYIT 257
LE+A +FI N + D I T+++ +G ++E A +LF+S P
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHG-NMELGEKIAKRLFESEN---PDSGTYV 462
Query: 258 ILGVLFACS 266
+L L+A S
Sbjct: 463 LLSNLYASS 471
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 53/317 (16%)
Query: 60 TFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
T SVLR+C+ ++ + IH+ I++ + D FV LI V S L + A VF +
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ ++ ++I F + + LY +M D +TSVL+AC L++ R+ H
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIH 146
Query: 180 VHVLKF---------------------------------DQDLILHNALLDMYCKCGSLE 206
VLK D+D + +++ Y +CG ++
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+A +F + +KD + W+ MI GL +N +AL+LF M++ N T + VL ACS
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 267 HAGLVDDG-W-HYF-----RSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNC 319
G ++ G W H F + N G ++++ R G +++ ++ M
Sbjct: 267 DLGALELGRWVHSFVENQRMELSNFVG--------NALINMYSRCGDINEARRVFRVMRD 318
Query: 320 KPDVVTWRTLLDACRAH 336
K DV+++ T++ H
Sbjct: 319 K-DVISYNTMISGLAMH 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + + EA+ VF M +++V+S+ TMIS + + A+ M+ G PN T
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 61 FSSVLRACEY--LSDIK-QIHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
++L AC + L DI ++ +S+ +V +E + ++D+ ++G L EA + +
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST--LTSVLRACTG 168
+ D ++ ++++A H + + + K++ + P D T L S L A +G
Sbjct: 419 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENP-DSGTYVLLSNLYASSG 472
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 259/447 (57%), Gaps = 5/447 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + VFD M RNV++ T +IS +L++ ++L M R V PN T+
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 62 SSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S L AC + + + +QIH+ + K G+ES++ + SAL+D+YSK G + +A ++F+
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V I+ AQ+ +EA+ + +M +AG D + +++VL + L LG+Q
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL 379
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H V+K F + ++N L++MY KCG L D++ +F RM ++ +SW++MIA A++G
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
L ALKL++ M + +P +T L +L ACSH GL+D G MK ++GI+P EHY C
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC 499
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
++D+LGRAG L + I + KPD W+ LL AC H + ++ YAA+++ + +
Sbjct: 500 IIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDS 559
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQI 416
+ A++L++N Y++ W + A+ + M+ G+ KE G S IE++ + H+F++ DK HPQ
Sbjct: 560 SSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQA 619
Query: 417 DEISRQLNQFISRLTGAGYVPDTNFVL 443
+ I L+ + GY PD F+L
Sbjct: 620 EAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 26/371 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K L +A +FDEMP R+V+S + + + + LL ML G + T
Sbjct: 99 LYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-T 157
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ VL C E+ K IH+ + G + ++ V + LI Y K G + VF M
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + ++I+ ++ ++ L L+ MRR + T S L AC+G + G+Q
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 178 AHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + K+ + +L + +AL+DMY KCGS+EDA IF D +S + ++ GLAQNG
Sbjct: 278 IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS 337
Query: 236 SLEALKLFDSMKVMGPR--PNYIT-ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
EA++ F M G N ++ +LGV F + GL K L+ + R+
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL----------GKQLHSLVIKRK 387
Query: 293 HYG------CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAA 346
G ++++ + G L D + M K + V+W +++ A H + A
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 347 KEILKLDAEDT 357
+E+ L+ + T
Sbjct: 447 EEMTTLEVKPT 457
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 11/243 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E+A +F+ E + VS T ++ + + A++ + ML+ GV +
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+VL L KQ+HS ++K + FV + LI++YSK G+L ++ +VF+ M
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V WNS+IAAFA+H G AL LY++M T S+L AC+ + L++ GR+
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 178 -----AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLA 231
VH ++ + + ++DM + G L++AK + + +K D W ++ +
Sbjct: 480 LLNEMKEVHGIEPRTE--HYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 232 QNG 234
+G
Sbjct: 538 FHG 540
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 140/282 (49%), Gaps = 16/282 (5%)
Query: 34 SSVKLNDRAMKLLVFML-REGVMPNMFT--FSSVLRACEYLSDI-KQIHSSILKVGLESD 89
S+ LN M LL+ + REG P++ +S+++ E+ + IH + L
Sbjct: 38 STFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNAL------- 90
Query: 90 VFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR 149
V ++L+ +Y+K G+L++A+ +F EM D + N + F ++ + + L K+M
Sbjct: 91 -VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 150 AGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLED 207
+G D +TLT VL C + + H + +D+++ + N L+ Y KCG
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 208 AKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
+ +F+ M ++VI+ + +I+GL +N + L+LF M+ PN +T L L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 268 AGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
+ + +G ++ YGI+ ++D+ + G ++D
Sbjct: 269 SQRIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIED 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L ++Q VF MP+RN VSW +MI+A++ A+KL M V P T
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 61 FSSVLRAC----------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
F S+L AC E L+++K++H G+E + +ID+ + G L EA
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVH------GIEPRTEHYTCIIDMLGRAGLLKEAK 514
Query: 111 SVFKEM-VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
S + + D +W +++ A + H D + Y +++
Sbjct: 515 SFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 267/479 (55%), Gaps = 36/479 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY L++ A+ VFD + +V SW MIS Y+ +K + +++LLV M R V P T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 61 FSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
VL AC + D K++H + + E + + +AL++ Y+ GE+ A+ +F+ M
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 118 TGDRVVWNSIIAAFAQHS------------------------DG-------DEALYLYKK 146
D + W SI+ + + DG +E+L ++++
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGR--QAHVHVLKFDQDLILHNALLDMYCKCGS 204
M+ AG D+ T+ SVL AC + LE+G + ++ K D+++ NAL+DMY KCG
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 205 LEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
E A+ +F+ M +D +W+ M+ GLA NG EA+K+F M+ M +P+ IT LGVL A
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
C+H+G+VD +F M++ + I+P HYGCM+D+LGRAG + + +++ +M P+ +
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 325 TWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
W LL A R H + +A AAK+IL+L+ ++ Y LL N YA K W D+ EVRR +
Sbjct: 539 VWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIV 598
Query: 385 VKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVL 443
I+K PG S IEV+ H F+ GDKSH Q +EI +L + T A Y+PDT+ +L
Sbjct: 599 DVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 41/358 (11%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE- 69
A +F ++PE +VV W MI +S V + ++L + ML+EGV P+ TF +L +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 70 ---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
L+ K++H ++K GL S+++V++AL+ +YS G + A VF D WN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV--LK 184
+I+ + + + +E++ L +M R TL VL AC+ + +L ++ H +V K
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG---------- 234
+ L L NAL++ Y CG ++ A IF M +DVISW++++ G + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 235 ----------------------FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
F+ E+L++F M+ G P+ T++ VL AC+H G ++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFN-ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G + ++ + I ++D+ + G + K+ H+M+ + D TW ++
Sbjct: 386 IG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMV 441
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 18/353 (5%)
Query: 45 LLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESD-VFVRSALIDVYSKL 103
LL+ + E + + F S+L C+ KQ+HS + G+ + F + + S+L
Sbjct: 21 LLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRL 80
Query: 104 -GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV 162
G + A +F ++ D VVWN++I +++ E + LY M + G D T +
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 163 LRACT-GMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD 219
L L G++ H HV+KF +L + NAL+ MY CG ++ A+ +F+R +D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 220 VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG---LVDDGWH 276
V SW+ MI+G + E+++L M+ P +T+L VL ACS L
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 277 YFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
Y K +P +++ G++D V++ M + DV++W +++
Sbjct: 261 YVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVER 315
Query: 337 RNVDLA-TYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
N+ LA TY ++ D ++ ++ + Y + +N+ E+ R M+ G+
Sbjct: 316 GNLKLARTY----FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 253/445 (56%), Gaps = 10/445 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERN-VVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y KF +E+AQ VFDE+P+R+ V W +++ YS + + A+ + M EGV + T
Sbjct: 205 YSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+SVL A DI + IH +K G SD+ V +ALID+Y K L EA S+F+ M
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D WNS++ D D L L+++M +G D TLT+VL C ++ L GR+
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE 384
Query: 178 AHVHVL------KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
H +++ + + +HN+L+DMY KCG L DA+ +F+ M VKD SW+ MI G
Sbjct: 385 IHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYG 444
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
AL +F M G +P+ IT +G+L ACSH+G +++G ++ M+ +Y I P
Sbjct: 445 VQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTS 504
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
+HY C++D+LGRA KL++ +L + V WR++L +CR H N DLA A K + +
Sbjct: 505 DHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHE 564
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK 411
L+ E G YVL+SN Y + + +V +VR MR + ++K PGCSWI + +H F G++
Sbjct: 565 LEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQ 624
Query: 412 SHPQIDEISRQLNQFISRLTGAGYV 436
+HP+ I L+ IS + G Y+
Sbjct: 625 THPEFKSIHDWLSLVISHMHGHEYM 649
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 10/340 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L+ A +VF ER+V + +IS + AM+ M G++P+ +T
Sbjct: 105 MYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 61 FSSVLRACEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
F S+L+ + LSD+K++H K+G +SD +V S L+ YSK + +A VF E+
Sbjct: 164 FPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD 223
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V+WN+++ ++Q ++AL ++ KMR G + T+TSVL A T ++ GR
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS 283
Query: 178 AHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K D+++ NAL+DMY K LE+A IF M +D+ +W++++ G
Sbjct: 284 IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGD 343
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPGREH 293
L LF+ M G RP+ +T+ VL C + G H + + L E
Sbjct: 344 HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF 403
Query: 294 -YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ ++D+ + G L D + M K D +W +++
Sbjct: 404 IHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMING 442
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 11/245 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LEEA +F+ M ER++ +W +++ + +D + L ML G+ P++ T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGL----ESDVFVRSALIDVYSKLGELLEALSVF 113
++VL C L+ ++Q IH ++ GL S+ F+ ++L+D+Y K G+L +A VF
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
M D WN +I + S G+ AL ++ M RAG D+ T +L+AC+ L
Sbjct: 426 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLN 485
Query: 174 LGRQ--AHVHVLKFDQDLILHNA-LLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAG 229
GR A + + H A ++DM + LE+A + ++ + + + W ++++
Sbjct: 486 EGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Query: 230 LAQNG 234
+G
Sbjct: 546 CRLHG 550
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK L +A++VFD M ++ SW MI+ Y + A+ + M R GV P+ T
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRS----ALIDVYSKLGELLEALSV-FKE 115
F +L+AC + + + + + ++ ++ S +ID+ + +L EA + +
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISK 530
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
+ + VVW SI+++ H + D AL K++
Sbjct: 531 PICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 255/427 (59%), Gaps = 9/427 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++++A+ VF +PE +VVS +I+ YS L + A+ L ML GV P+ T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEIT 631
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESD-VFVRSALIDVYSKLGELLEALSVFKEM 116
F++++ AC E L+ Q H I K G S+ ++ +L+ +Y + EA ++F E+
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 117 VTGDRVV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ +V W +++ +Q+ +EAL YK+MR G DQ+T +VLR C+ +S L G
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 176 RQAHVHV--LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
R H + L D D + N L+DMY KCG ++ + +F+ M + +V+SW+++I G A+
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
NG++ +ALK+FDSM+ P+ IT LGVL ACSHAG V DG F M YGI+ +
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
H CM+DLLGR G L + I N KPD W +LL ACR H + +A+++++L
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
+ +++ AYVLLSN YA+ W +R+ MR +G++K PG SWI+V+++ H F GDKS
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 413 HPQIDEI 419
H +I +I
Sbjct: 992 HSEIGKI 998
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 8/338 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E A VF+ + E+N V W MI Y+ + + M+L + M G + FT
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+S+L C D++ Q HS I+K L ++FV +AL+D+Y+K G L +A +F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN+II ++ Q + EA L+K+M G +D + L S L+ACT + L G+Q
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K D+DL ++L+DMY KCG ++DA+ +F+ + V+S + +IAG +QN
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL 610
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EA+ LF M G P+ IT ++ AC + G F G E+ G
Sbjct: 611 E-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG 668
Query: 296 -CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+L + + + + L E++ +V W ++
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 43/411 (10%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ L++A+++F EM +VV+W MIS + A++ M + V T
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SVL A ++++ +H+ +K+GL S+++V S+L+ +YSK ++ A VF+ +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V WN++I +A + + + + L+ M+ +G+ D T TS+L C LE+G Q
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 179 HVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H ++ K ++L + NAL+DMY KCG+LEDA+ IF RM +D ++W+T+I Q+
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHA-GLVDDGWHYFRSMKNLYGIDPGREHYG 295
EA LF M + G + + L AC+H GL + S+K G+D
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK--CGLDRDLHTGS 568
Query: 296 CMLDLLGRAG------------------------------KLDDMVKLIHEM---NCKPD 322
++D+ + G L++ V L EM P
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPS 628
Query: 323 VVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLS--NTYANSK 371
+T+ T+++AC ++ L T +I K G Y+ +S Y NS+
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 37/277 (13%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + A+ FD + E++V +W +M+S YSS+ + ++ V + + PN FT
Sbjct: 104 LYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FS VL C +++ +QIH S++K+GLE + + AL+D+Y+K + +A VF+ +V
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V W + + + + +EA+ ++++MR G D +V
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV--------------- 267
Query: 178 AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
++ Y + G L+DA+ +F M DV++W+ MI+G + G
Sbjct: 268 ------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
A++ F +M+ + T+ VL A +D G
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 19/303 (6%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
K +HS L +G++S+ + +A++D+Y+K ++ A F + + D WNS+++ ++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSI 138
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
+ L + + ++ T + VL C + +E GRQ H ++K +++
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPR 252
AL+DMY KC + DA+ +F +V + + W+ + +G + G EA+ +F+ M+ G R
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 253 PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVK 312
P+++ + V+ G + D F M + P + M+ G+ G ++
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIE 313
Query: 313 LIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYAN 369
M + K T ++L A N+DL E +KL L SN Y
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LASNIYVG 365
Query: 370 SKM 372
S +
Sbjct: 366 SSL 368
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 255/449 (56%), Gaps = 6/449 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + AQ +F + +VV +T MIS Y L ++++ ++++ + PN T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+L L +K ++H I+K G ++ + A+ID+Y+K G + A +F+ +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V WNS+I AQ + A+ ++++M +G D ++++ L AC + G+
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H ++K D+ + L+DMY KCG+L+ A +F M K+++SW+++IA +G
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624
Query: 237 LEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
++L LF M + G RP+ IT L ++ +C H G VD+G +FRSM YGI P +EHY
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DL GRAG+L + + + M PD W TLL ACR H+NV+LA A+ +++ LD
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPS 744
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
++G YVL+SN +AN++ W V +VR M+ + ++K PG SWIE++K+ H F+ GD +HP+
Sbjct: 745 NSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPE 804
Query: 416 IDEISRQLNQFISRLTGAGYVPDTNFVLQ 444
I LN + L GY+P L
Sbjct: 805 SSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 176/343 (51%), Gaps = 11/343 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++A +F M + V+W MIS Y L + ++ M+ GV+P+ T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FSS+L + E L KQIH I++ + D+F+ SALID Y K + A ++F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ D VV+ ++I+ + + ++L +++ + + ++ TL S+L + L+LGR+
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K FD + A++DMY KCG + A IF R+ +D++SW++MI AQ+
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPGREH 293
A+ +F M V G + ++I L AC++ G H F +K+ D E
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-IKHSLASDVYSE- 580
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++D+ + G L + + M K ++V+W +++ AC H
Sbjct: 581 -STLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 180/358 (50%), Gaps = 31/358 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+++ ++ +FD + +++ V W M++ Y+ D +K M + + PN TF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 62 SSVLRAC--EYLSDIK-QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
VL C + L D+ Q+H ++ G++ + ++++L+ +YSK G +A +F+ M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V WN +I+ + Q +E+L + +M +G D T +S+L + + LE +Q
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H ++++ D+ L +AL+D Y KC + A+ IF++ DV+ ++ MI+G NG
Sbjct: 363 HCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLY 422
Query: 237 LEALKLFDSMKVMGPRPNYIT------ILGVLFACS-----HAGLVDDGWHYFRSMKNLY 285
+++L++F + + PN IT ++G+L A H ++ G+
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD--------- 473
Query: 286 GIDPGREHYGC-MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
R + GC ++D+ + G+++ ++ ++ K D+V+W +++ C N A
Sbjct: 474 ----NRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAA 526
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 17 EMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQ 76
++ ++ W ++IS++ L ++A+ ML GV P++ TF +++AC L + K
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 77 I---HSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
I ++ +G++ + FV S+LI Y + G++ +F ++ D V+WN ++ +A+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLIL 191
D + + MR + T VL C L++LG Q H V V D + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
N+LL MY KCG +DA +F M D ++W+ MI+G Q+G E+L F M G
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 252 RPNYITILGVLFACS 266
P+ IT +L + S
Sbjct: 337 LPDAITFSSLLPSVS 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 17/283 (6%)
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S +L+AC L KQ+H+ ++ + D + ++ +Y+ G + +F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 118 TGDRVV--WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT------GM 169
+ WNSII++F ++ ++AL Y KM G D ST +++AC G+
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 170 SLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
L V L D + + ++L+ Y + G ++ +F+R++ KD + W+ M+ G
Sbjct: 158 DFL----SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
A+ G +K F M++ PN +T VL C+ L+D G + + G+D
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ-LHGLVVVSGVDF 272
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+L + + G+ DD KL M+ + D VTW ++
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 240/417 (57%), Gaps = 13/417 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A+ +FDE+ ER+ VSW +MIS YS AM L M EG P+ T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 61 FSSVLRACEYLSDIK-----QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
S+L AC +L D++ + + K+GL + F+ S LI +Y K G+L A VF +
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M+ DRV W ++I ++Q+ EA L+ +M + G D TL++VL AC + LELG
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 176 RQAHVHV--LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+Q H L ++ + L+DMY KCG +E+A +F M VK+ +W+ MI A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G + EAL LFD M V P+ IT +GVL AC HAGLV G YF M +++G+ P EH
Sbjct: 414 GHAKEALLLFDRMSV---PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL- 352
Y ++DLL RAG LD+ + + KPD + +L AC ++V + A + ++++
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILG 409
+A++ G YV+ SN A+ KMW++ A++R MR +G+ K PGCSWIE++ ++ F+ G
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 20/334 (5%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSV-KLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE 69
+ +F E N S+ MI ++ ++ A+ L M G+ P+ FT++ V AC
Sbjct: 84 SSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACA 143
Query: 70 YLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
L +I + +HSS+ KVGLE DV + +LI +Y+K G++ A +F E+ D V WNS
Sbjct: 144 KLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNS 203
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR--QAHVHVLK 184
+I+ +++ +A+ L++KM GF D+ TL S+L AC+ + L GR + K
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
L + L+ MY KCG L+ A+ +FN+M+ KD ++W+ MI +QNG S EA KLF
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHY------FRSMKNLYGIDPGREHYGCML 298
M+ G P+ T+ VL AC G ++ G N+Y + G ++
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY-VATG------LV 376
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
D+ G+ G++++ +++ M K + TW ++ A
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNE-ATWNAMITA 409
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 281/536 (52%), Gaps = 33/536 (6%)
Query: 1 MYVKFNLLE-EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY+K + E EA VF M NVVSWTT+I LL+ M++ V PN+
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T S VLRAC L ++ +IH+ +L+ ++ ++ V ++L+D Y+ ++ A +V + M
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + + S++ F + + AL + M G DQ +L + A + LE G+
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGK 548
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H + +K F + N+L+DMY KCGSLEDAK +F + DV+SW+ +++GLA NG
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNG 608
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
F AL F+ M++ P+ +T L +L ACS+ L D G YF+ MK +Y I+P EHY
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHY 668
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
++ +LGRAG+L++ ++ M+ KP+ + ++TLL ACR N+ L A + L L
Sbjct: 669 VHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAP 728
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS-- 412
D Y+LL++ Y S + R M K + K+ G S +EV ++H+F+ D +
Sbjct: 729 SDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRV 788
Query: 413 ------HPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVF 466
+ +I+ I ++ +F G+ Y + N HS K A+V+
Sbjct: 789 DKTNGIYAEIESIKEEIKRF-----GSPYRGNEN--------------ASFHSAKQAVVY 829
Query: 467 GIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSC 522
G + E + V KN +C DCH F ++ +L + I +RD + H F++G CSC
Sbjct: 830 GFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 173/335 (51%), Gaps = 7/335 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+K + + A+ +FDEM R V +WT MISA++ + A+ L M+ G PN FT
Sbjct: 67 LYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFT 126
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FSSV+R+C L DI ++H S++K G E + V S+L D+YSK G+ EA +F +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + W +I++ EAL Y +M +AG P ++ T +L A + + LE G+
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKT 245
Query: 178 AHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +++ +++L +L+D Y + +EDA + N +DV W+++++G +N
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ EA+ F M+ +G +PN T +L CS +D G S G + +
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQ-IHSQTIKVGFEDSTDVGN 364
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + + + P+VV+W TL+
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 147/271 (54%), Gaps = 5/271 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K +EA +F + + +SWT MIS+ + A++ M++ GV PN FT
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 61 FSSVLRACEYLS--DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
F +L A +L K IHS+I+ G+ +V ++++L+D YS+ ++ +A+ V
Sbjct: 228 FVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D +W S+++ F ++ EA+ + +MR G + T +++L C+ + L+ G+Q
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLE-DAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K F+ + NAL+DMY KC + E +A +F MV +V+SW+T+I GL +GF
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGF 407
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+ L M PN +T+ GVL ACS
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 43/358 (12%)
Query: 76 QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
IH ++K GL ++ + + L+ +Y K + A +F EM W +I+AF +
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 136 DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHN 193
+ AL L+++M +G ++ T +SV+R+C G+ + G + H V+K F+ + ++ +
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRP 253
+L D+Y KCG ++A +F+ + D ISW+ MI+ L EAL+ + M G P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKL 313
N T + +L A S GL + S + GI ++D + K++D V++
Sbjct: 224 NEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 314 IH----------------------------------EMNCKPDVVTWRTLLDACRAHRNV 339
++ + +P+ T+ +L C A R++
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 340 DLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPG-CSW 396
D + +K+ ED+ + N + M +EV + RV G P SW
Sbjct: 342 DFGKQIHSQTIKVGFEDSTD---VGNALVDMYMKCSASEVEAS-RVFGAMVSPNVVSW 395
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 246/444 (55%), Gaps = 39/444 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + EA+ VFDEMPER+ ++WTTM+SAY V D A L M
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS----------- 962
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
E + + LI+ Y LG L +A S+F +M D
Sbjct: 963 -------------------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDI 997
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
+ W ++I ++Q+ EA+ ++ KM G D+ T+++V+ AC + +LE+G++ H++
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 182 VLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEA 239
L+ F D+ + +AL+DMY KCGSLE A +F + K++ W+++I GLA +GF+ EA
Sbjct: 1058 TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
LK+F M++ +PN +T + V AC+HAGLVD+G +RSM + Y I EHYG M+
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
L +AG + + ++LI M +P+ V W LLD CR H+N+ +A A +++ L+ ++G
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKE-PGCSWIEVDKQIHAFILGDKSHPQIDE 418
Y LL + YA W DVAE+R MR GI K PG S I +DK+ H F DKSH DE
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1297
Query: 419 ISRQLNQFISRLTGAGYVPDTNFV 442
+ L++ ++ AGYV +T V
Sbjct: 1298 VCLLLDEIYDQMGLAGYVQETENV 1321
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 47/356 (13%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
F L+ A +M E NV + + + + R+++L V MLR+ V P+ +T+S
Sbjct: 816 TSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYS 875
Query: 63 SVLRACEYLSDI-KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
S+++A + S + + + I K G V +++ LID YS G + EA VF EM D
Sbjct: 876 SLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDD 935
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
+ W ++++A+ + D D A L +M ++++ TS
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQM------SEKNEATS-------------------- 969
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
N L++ Y G+LE A+ +FN+M VKD+ISW+TMI G +QN EA+
Sbjct: 970 -----------NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIA 1018
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYG-CMLD 299
+F M G P+ +T+ V+ AC+H G+++ G + +++N + +D + G ++D
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV---YIGSALVD 1075
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
+ + G L+ + + + K ++ W ++++ AH A A K K++ E
Sbjct: 1076 MYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAH---GFAQEALKMFAKMEME 1127
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LE A +VF +P++N+ W ++I ++ A+K+ M E V PN T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 61 FSSVLRACEY---LSDIKQIHSSIL-KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F SV AC + + + ++I+ S++ + S+V ++ ++SK G + EAL + M
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Query: 117 -VTGDRVVWNSII 128
+ V+W +++
Sbjct: 1196 EFEPNAVIWGALL 1208
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 247/449 (55%), Gaps = 37/449 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YVK +L A+VVFD MPER+VVSW TM+ Y+ A+ R G+ N F+F
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 62 SSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ +L AC L +Q H +L G S+V + ++ID Y+K G++ A F EM
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 119 GD-------------------------------RVVWNSIIAAFAQHSDGDEALYLYKKM 147
D V W ++IA + + G+ AL L++KM
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 148 RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSL 205
G +Q T +S L A ++ L G++ H ++++ + + I+ ++L+DMY K GSL
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 206 EDAKFIFNRMVVK-DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
E ++ +F K D + W+TMI+ LAQ+G +AL++ D M +PN T++ +L A
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
CSH+GLV++G +F SM +GI P +EHY C++DLLGRAG ++++ I EM +PD
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKH 482
Query: 325 TWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
W +L CR H N +L AA E++KLD E + Y+LLS+ YA+ W V ++R M+
Sbjct: 483 IWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMK 542
Query: 385 VKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
+ + KE SWIE++K++ AF + D SH
Sbjct: 543 KRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 46/287 (16%)
Query: 89 DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR 148
+++ + ++ Y K G L+ A VF M D V WN+++ +AQ + EAL+ YK+ R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLE 206
R+G ++ + +L AC L+L RQAH VL F +++L +++D Y KCG +E
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 207 DAKFIFNRMVVKDV-------------------------------ISWSTMIAGLAQNGF 235
AK F+ M VKD+ +SW+ +IAG + G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG------IDP 289
AL LF M +G +P T L C+ A + R K ++G + P
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCL--CASASIAS-----LRHGKEIHGYMIRTNVRP 344
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++D+ ++G L+ ++ + K D V W T++ A H
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 140/361 (38%), Gaps = 74/361 (20%)
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH- 181
V S ++ A ++ +A+ + + + G L S+L+ C L+ G+ H H
Sbjct: 13 VAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHL 72
Query: 182 -VLKFDQ-DLILHNALLDMYCKCGSLEDA------------------------------- 208
+ F + + +L N L+ MY KCG DA
Sbjct: 73 KITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 209 KFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC--- 265
+ +F+ M +DV+SW+TM+ G AQ+G EAL + + G + N + G+L AC
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS 192
Query: 266 --------SHAGLVDDGWHYFRSMKNLYGIDPGREHYGC-MLDLLGRAGKLDDMVKLIHE 316
+H ++ G+ + N+ C ++D + G+++ + E
Sbjct: 193 RQLQLNRQAHGQVLVAGF-----LSNVV--------LSCSIIDAYAKCGQMESAKRCFDE 239
Query: 317 MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
M K D+ W TL+ + + A K ++ ++ ++ L Y N
Sbjct: 240 MTVK-DIHIWTTLIS---GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 377 AEVRRTMRVKGIRKE-----------PGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQ 425
++ R M G++ E + + K+IH +++ P IS ++
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 426 F 426
+
Sbjct: 356 Y 356
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 7/430 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y L + A +FD +++VV+WT MI + AM V M + GV N T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 62 SSVLRACEYLSDIK---QIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SVL+A + D++ +H L+ G ++ DVF+ S+L+D+Y K +A VF EM
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + V W ++IA + Q D+ + ++++M ++ ++ TL+SVL AC + L GR+
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +++K + + L+D+Y KCG LE+A +F R+ K+V +W+ MI G A +G+
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ +A LF +M PN +T + VL AC+H GLV++G F SMK + ++P +HY
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYA 447
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+DL GR G L++ LI M +P V W L +C H++ +L YAA ++KL
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPS 507
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP- 414
+G Y LL+N Y+ S+ W++VA VR+ M+ + + K PG SWIEV ++ FI D P
Sbjct: 508 HSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPL 567
Query: 415 QIDEISRQLN 424
+ D++ + L+
Sbjct: 568 ESDDLYKTLD 577
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 11/319 (3%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNMFTFSSVLRACEYLSDIK--QIHSSI 81
W ++I +S +R + L + M R GV+P+ TF +L+A L D Q H+ I
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
+K GL+SD FVR++LI YS G A +F D V W ++I F ++ EA+
Sbjct: 130 VKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ---DLILHNALLDM 198
+ +M++ G A++ T+ SVL+A + + GR H L+ + D+ + ++L+DM
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y KC +DA+ +F+ M ++V++W+ +IAG Q+ + + +F+ M PN T+
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 259 LGVLFACSHAGLVDDGWHYFRSM-KNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
VL AC+H G + G M KN I+ ++DL + G L++ + L+ E
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKN--SIEINTTAGTTLIDLYVKCGCLEEAI-LVFER 366
Query: 318 NCKPDVVTWRTLLDACRAH 336
+ +V TW +++ AH
Sbjct: 367 LHEKNVYTWTAMINGFAAH 385
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 8/275 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + ++AQ VFDEMP RNVV+WT +I+ Y + D+ M + ML+ V PN T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSVL AC ++ + +++H ++K +E + + LID+Y K G L EA+ VF+ +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ W ++I FA H +A L+ M + ++ T +VL AC L+E GR+
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 178 AHVHV---LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDV-ISWSTMIAG-LAQ 232
+ + + + ++D++ + G LE+AK + RM ++ + W + L
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
+ L +K+ T+L L++ S
Sbjct: 489 KDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 276/542 (50%), Gaps = 59/542 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K LE+A+ VFD + ++V +W +MI+ Y +A +L M + PN+ T
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
+++ +I Y K G+ EA+ +F+ M
Sbjct: 456 WNT--------------------------------MISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
V + WN IIA + Q+ DEAL L++KM+ + F + T+ S+L AC + ++
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 176 RQAHVHVLKFDQDLI--LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
R+ H VL+ + D I + NAL D Y K G +E ++ IF M KD+I+W+++I G +
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLH 603
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G AL LF+ MK G PN T+ ++ A G VD+G F S+ N Y I P EH
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH 663
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
M+ L GRA +L++ ++ I EMN + + W + L CR H ++D+A +AA+ + L+
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLE 723
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS- 412
E+T ++S YA E + R ++K G SWIEV IH F GD+S
Sbjct: 724 PENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSK 783
Query: 413 ------HPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVF 466
+P ++++SR L+ + G ++ E E RE++ HSEK A+ F
Sbjct: 784 LCTDVLYPLVEKMSR-LDNRSDQYNGELWI----------EEEGREETCGIHSEKFAMAF 832
Query: 467 GIMSF--PKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGD 524
G++S + TIR+ KNLR+C DCH AK ++K I++ D HHF++G CSC D
Sbjct: 833 GLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKD 892
Query: 525 YW 526
YW
Sbjct: 893 YW 894
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 49/346 (14%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +A+ VFD M ERN+ +W+ MI AYS KL M+++GV+P+ F
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F +L+ C D+ K IHS ++K+G+ S + V ++++ VY+K GEL A F+ M
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + WNS++ A+ Q+ +EA+ L K+M + G
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP----------------------- 280
Query: 178 AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQN 233
L+ N L+ Y + G + A + +M + DV +W+ MI+GL N
Sbjct: 281 ----------GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHN 330
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP---G 290
G +AL +F M + G PN +TI+ + ACS +++ G + ID G
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA-CRA 335
++D+ + GKL+D K+ + K DV TW +++ C+A
Sbjct: 391 NS----LVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMITGYCQA 431
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 166/342 (48%), Gaps = 41/342 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K L+ A F M ER+V++W +++ AY ++ A++L+ M +EG+ P + T
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
++ LI Y++LG+ A+ + ++M
Sbjct: 285 WN--------------------------------ILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+T D W ++I+ + +AL +++KM AG + T+ S + AC+ + ++ G
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H +K F D+++ N+L+DMY KCG LEDA+ +F+ + KDV +W++MI G Q G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A +LF M+ RPN IT ++ G + F+ M+ + +
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDAC 333
++ + GK D+ ++L +M P+ VT +LL AC
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 14/302 (4%)
Query: 42 AMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIH-SSIL--KVGL--ESDVFVRSAL 96
A K L + ++G T+ +L +C D IH IL + GL E DVFV + L
Sbjct: 65 AEKALDSLFQQGSKVKRSTYLKLLESC---IDSGSIHLGRILHARFGLFTEPDVFVETKL 121
Query: 97 IDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQ 156
+ +Y+K G + +A VF M + W+++I A+++ + E L++ M + G D
Sbjct: 122 LSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLKFDQD--LILHNALLDMYCKCGSLEDAKFIFNR 214
+L+ C +E G+ H V+K L + N++L +Y KCG L+ A F R
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 215 MVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
M +DVI+W++++ QNG EA++L M+ G P +T ++ + G D
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAG---KLDDMVKLIHEMNCKPDVVTWRTLLD 331
+ M+ +GI + M+ L G + DM + + P+ VT + +
Sbjct: 302 MDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 332 AC 333
AC
Sbjct: 361 AC 362
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 254/466 (54%), Gaps = 45/466 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
++ +L+ A VFDE+PE +V+S T +I + + A + +L G+ PN FTF
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLG-------------- 104
+V+ + D+K Q+H LK+GL S+VFV SA+++ Y KL
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 105 -----------------ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
E EALS+F+ M V WN++I F+Q +EA+ + M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 148 RRAGFP-ADQSTLTSVLRACTGMSLLELGRQAHVHVLKF---DQDLILHNALLDMYCKCG 203
R G ++ST + A + ++ G+ H +KF ++ + N+L+ Y KCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 204 SLEDAKFIFNRMV--VKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITILG 260
++ED+ FN++ ++++SW++MI G A NG EA+ +F+ M K RPN +TILG
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 261 VLFACSHAGLVDDGWHYFRSMKNLYGIDPGR---EHYGCMLDLLGRAGKLDDMVKLIHEM 317
VLFAC+HAGL+ +G+ YF N Y DP EHY CM+D+L R+G+ + +LI M
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 318 NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVA 377
P + W+ LL C+ H N LA AA +IL+LD D +YV+LSN Y+ + W +V+
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVS 455
Query: 378 EVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQL 423
+RR M+ G+++ GCSWIEV QI F+ DK++ DE+ R L
Sbjct: 456 LIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 249/425 (58%), Gaps = 6/425 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + LE A+ VF +MP +++V+W +MI Y + + +++L M+ EG P+ T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+S+L AC ++ K IH +++ + +D++V +LID+Y K GE A +VF +
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
WN +I+++ + +A+ +Y +M G D T TSVL AC+ ++ LE G+Q
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 178 AHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H+ + + + D +L +ALLDMY KCG+ ++A IFN + KDV+SW+ MI+ +G
Sbjct: 432 IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQ 491
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL FD M+ G +P+ +T+L VL AC HAGL+D+G +F M++ YGI+P EHY
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVT-WRTLLDACRAHRNVDLATYAAKEILKLDA 354
CM+D+LGRAG+L + ++I + D TL AC H L A+ +++
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP 611
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
+D Y++L N YA+ + W+ VR M+ G+RK+PGCSWIE+ ++ F D+SH
Sbjct: 612 DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHL 671
Query: 415 QIDEI 419
+ + +
Sbjct: 672 RAENV 676
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 188/368 (51%), Gaps = 9/368 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY KFNL E + VFDEMPER+V SW T+IS + ++A++L M G PN +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ + AC +L K+IH +K G E D +V SAL+D+Y K L A VF++M
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V WNS+I + D + + +M G Q+TLTS+L AC+ L G+
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI-SWSTMIAGLAQNG 234
H +V++ + D+ ++ +L+D+Y KCG A+ +F++ KDV SW+ MI+ G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVG 389
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+A++++D M +G +P+ +T VL ACS ++ G S+ ++
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE-SRLETDELLL 448
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
+LD+ + G + ++ + + K DVV+W ++ A +H A Y E+ K
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 355 EDTGAYVL 362
+ G +L
Sbjct: 508 KPDGVTLL 515
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 151/267 (56%), Gaps = 11/267 (4%)
Query: 11 AQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV-MPNMFTFSSVLRAC 68
A+ VF+ R +V W +++S YS + +++ +L + +P+ FTF +V++A
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 69 -----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
E+L + IH+ ++K G DV V S+L+ +Y+K +L VF EM D
Sbjct: 118 GALGREFLG--RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
WN++I+ F Q + ++AL L+ +M +GF + +LT + AC+ + LE G++ H +
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 184 K--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
K F+ D +++AL+DMY KC LE A+ +F +M K +++W++MI G G S ++
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHA 268
+ + M + G RP+ T+ +L ACS +
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 145/277 (52%), Gaps = 12/277 (4%)
Query: 63 SVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-V 117
S+LR C + L IK +H IL +GL DV + +LI+VY + A VF+ +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPA-DQSTLTSVLRACTGMSLLELGR 176
D +WNS+++ ++++S + L ++K++ D T +V++A + LGR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H V+K + D+++ ++L+ MY K E++ +F+ M +DV SW+T+I+ Q+G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS-MKNLYGIDPGREH 293
+ +AL+LF M+ G PN +++ + ACS ++ G R +K + +D
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN- 246
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ G+ L+ ++ +M + +V W +++
Sbjct: 247 -SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 254/458 (55%), Gaps = 37/458 (8%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV-MPNMFTFSSVLR 66
++ A +F+++ NV + ++I AY+ L +++ +LR+ +P+ FTF + +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 67 ACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
+C L KQ+H + K G V +ALID+Y K +L++A VF EM D +
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 124 WNSIIAAFAQHSDGD-------------------------------EALYLYKKMRRAGF 152
WNS+++ +A+ EA+ +++M+ AG
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 153 PADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKF 210
D+ +L SVL +C + LELG+ H++ + F + + NAL++MY KCG + A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
+F +M KDVISWSTMI+G A +G + A++ F+ M+ +PN IT LG+L ACSH G+
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+G YF M+ Y I+P EHYGC++D+L RAGKL+ V++ M KPD W +LL
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
+CR N+D+A A +++L+ ED G YVLL+N YA+ W DV+ +R+ +R + ++K
Sbjct: 418 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 477
Query: 391 EPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFIS 428
PG S IEV+ + F+ GD S P EIS L F S
Sbjct: 478 TPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTS 515
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 171/360 (47%), Gaps = 39/360 (10%)
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
F L+ + ++ K+I++SI+ GL F+ + ++D K+ ++ A +F ++ +
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPN 72
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGRQAH 179
++NSII A+ +S + + +YK++ R F D+ T + ++C + LG+Q H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 180 VHVLKF---------------------------------DQDLILHNALLDMYCKCGSLE 206
H+ KF ++D+I N+LL Y + G ++
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
AK +F+ M+ K ++SW+ MI+G G +EA+ F M++ G P+ I+++ VL +C+
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 267 HAGLVDDG-WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVT 325
G ++ G W + + + + G + ++++ + G + ++L +M K DV++
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQTGVCN--ALIEMYSKCGVISQAIQLFGQMEGK-DVIS 309
Query: 326 WRTLLDACRAHRNVDLATYAAKEILKLDAEDTG-AYVLLSNTYANSKMWNDVAEVRRTMR 384
W T++ H N A E+ + + G ++ L + ++ MW + MR
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 17/273 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + +++A+ +F M ++ +VSWT MIS Y+ + AM M G+ P+ +
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SVL +C L + K IH + G V +ALI++YSK G + +A+ +F +M
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 304
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT-------GMSL 171
D + W+++I+ +A H + A+ + +M+RA + T +L AC+ G+
Sbjct: 305 KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRY 364
Query: 172 LELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGL 230
++ RQ + + + + + L+D+ + G LE A I M +K D W ++++
Sbjct: 365 FDMMRQDY----QIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 231 AQNGFSLEALKLFDSMKVMGPRP--NYITILGV 261
G AL D + + P NY+ + +
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANI 453
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ +A +F +M ++V+SW+TMIS Y+ A++ M R V PN T
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 61 FSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +L AC ++ ++ +E + LIDV ++ G+L A+ + K M
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEAL 141
+ D +W S++++ + D AL
Sbjct: 405 PMKPDSKIWGSLLSSCRTPGNLDVAL 430
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 238/424 (56%), Gaps = 10/424 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSV-----KLNDRAMKLLVFMLREGVM 55
MY K L+EA +F MP +NVV++ MIS + + + + A KL + M R G+
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 56 PNMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
P+ TFS VL+AC + +QIH+ I K +SD F+ SALI++Y+ +G + +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F D W S+I Q+ + A L++++ + ++ T++ ++ AC + L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 173 ELGRQAHVHVLKFDQDLI--LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
G Q + +K D + + + MY K G++ A +F + DV ++S MI+ L
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
AQ+G + EAL +F+SMK G +PN LGVL AC H GLV G YF+ MKN Y I+P
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPN 595
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
+H+ C++DLLGR G+L D LI + VTWR LL +CR +++ + A+ ++
Sbjct: 596 EKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLM 655
Query: 351 KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD 410
+L+ E +G+YVLL N Y +S + + EVR MR +G++KEP SWI + Q H+F + D
Sbjct: 656 ELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVAD 715
Query: 411 KSHP 414
SHP
Sbjct: 716 LSHP 719
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 183/346 (52%), Gaps = 19/346 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L A+ +FD MPERN++S+ ++IS Y+ + ++AM+L + + + FT
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++ L C D+ + +H ++ GL VF+ + LID+YSK G+L +A+S+F
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT---GMSLLEL 174
D+V WNS+I+ + + +E L L KM R G L SVL+AC +E
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 175 GRQAHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G H + K + D+++ ALLDMY K GSL++A +F+ M K+V++++ MI+G Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 233 -----NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM-KNLYG 286
+ S EA KLF M+ G P+ T VL ACS A ++ G + KN +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 287 IDPGREHYG-CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD 331
D E G +++L G +D ++ + K D+ +W +++D
Sbjct: 391 SD---EFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMID 432
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 99 VYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
+Y K EL A +F M + + +NS+I+ + Q ++A+ L+ + R A D+ T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 159 LTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV 216
L C L+LG H V V Q + L N L+DMY KCG L+ A +F+R
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 217 VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS---HAGLVDD 273
+D +SW+++I+G + G + E L L M G + VL AC + G ++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 274 GWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G L G++ +LD+ + G L + +KL M K +VVT+ ++
Sbjct: 271 GMAIHCYTAKL-GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISG 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 174 LGRQAHVHVLKFDQDLILHNALLD--MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
LG+ AH H++K + L+ MYCKC L A+ +F+RM +++IS++++I+G
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
Q GF +A++LF + + + T G L C +D G + + G+
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQV 183
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA--------------CRAHR 337
++D+ + GKLD + L + + D V+W +L+ + HR
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 338 N-VDLATYAAKEILK 351
+ ++L TYA +LK
Sbjct: 243 DGLNLTTYALGSVLK 257
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 247/437 (56%), Gaps = 7/437 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE--GVMPNM 58
+Y K +A +VF M E+++V+W ++IS A+K+ M + + P+
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 59 FTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
+SV AC L ++ Q+H S++K GL +VFV S+LID+YSK G AL VF
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M T + V WNS+I+ +++++ + ++ L+ M G D ++TSVL A + + L G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 176 RQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H + L+ D L NAL+DMY KCG + A+ IF +M K +I+W+ MI G +
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G + AL LFD MK G P+ +T L ++ AC+H+G V++G + F MK YGI+P EH
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y M+DLLGRAG L++ I M + D W LL A R H NV+L +A+++L+++
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSH 413
E YV L N Y + + N+ A++ M+ KG+ K+PGCSWIEV + + F G S
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSS 836
Query: 414 PQIDEISRQLNQFISRL 430
P EI LN+ S +
Sbjct: 837 PMKAEIFNVLNRLKSNM 853
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 178/347 (51%), Gaps = 11/347 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY KF L +A VF E+ ++ NVV W MI + + + ++ L + V
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+F+ L AC + +QIH ++K+GL +D +V ++L+ +YSK G + EA +VF +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V +WN+++AA+A++ G AL L+ MR+ D TL++V+ C+ + L G+
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H + K + +ALL +Y KCG DA +F M KD+++W ++I+GL +NG
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG 453
Query: 235 FSLEALKLFDSMK--VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
EALK+F MK +P+ + V AC+ + G SM G+
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVF 512
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNV 339
++DL + G + +K+ M+ + ++V W +++ +C + N+
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 164/352 (46%), Gaps = 27/352 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPE-------RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG 53
MYVK L+ A VFD + R+V W +MI Y + + ML G
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 VMPNMFTFSSVLRA-CEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLE 108
V P+ F+ S V+ C+ + + KQIH +L+ L++D F+++ALID+Y K G ++
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 109 ALSVFKEMVTGDRVV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT 167
A VF E+ VV WN +I F + +L LY + ++ T L AC+
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 168 GMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWST 225
GRQ H V+K D + +LL MY KCG + +A+ +F+ +V K + W+
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-----YFRS 280
M+A A+N + AL LF M+ P+ T+ V+ CS GL + G + R
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 281 MKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+++ I+ +L L + G D + M K D+V W +L+
Sbjct: 404 IQSTSTIESA------LLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISG 448
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 15/227 (6%)
Query: 57 NMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
++FTF S+L+AC L+++ K IH S++ +G D F+ ++L+++Y K G L A+ VF
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 114 ---KEMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC 166
+ +G D VWNS+I + + E + +++M G D +L+ V+
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 167 T--GMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVI 221
G E G+Q H +L+ D D L AL+DMY K G DA +F + K +V+
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 222 SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHA 268
W+ MI G +G +L L+ K + + G L ACS +
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 11/217 (5%)
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGRQAH--VH 181
NS I A Q + +AL+LY K + F T S+L+AC+ ++ L G+ H V
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFN-------RMVVKDVISWSTMIAGLAQNG 234
VL + D + +L++MY KCG L+ A +F+ + +DV W++MI G +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 235 FSLEALKLFDSMKVMGPRPNYITI-LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
E + F M V G RP+ ++ + V C + +D
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++D+ + G D ++ E+ K +VV W ++
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 238/430 (55%), Gaps = 42/430 (9%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
VK L +A+ +FDEMP+R+++SW TM+ Y+ + +A +L MP T S
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF------EKMPERNTVS 249
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR- 121
S ++ YSK G++ A +F +M +
Sbjct: 250 ------------------------------WSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 122 -VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V W IIA +A+ EA L +M +G D + + S+L ACT LL LG + H
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH- 338
Query: 181 HVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
+LK + + NALLDMY KCG+L+ A +FN + KD++SW+TM+ GL +G
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGK 398
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
EA++LF M+ G RP+ +T + VL +C+HAGL+D+G YF SM+ +Y + P EHYGC+
Sbjct: 399 EAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
+DLLGR G+L + +K++ M +P+VV W LL ACR H VD+A ++KLD D
Sbjct: 459 VDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDP 518
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQID 417
G Y LLSN YA ++ W VA++R M+ G+ K G S +E++ IH F + DKSHP+ D
Sbjct: 519 GNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSD 578
Query: 418 EISRQLNQFI 427
+I + L I
Sbjct: 579 QIYQMLGSLI 588
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EY 70
VF+++ E NV ++I A++ +A + M R G+ + FT+ +L+AC +
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGEL--LEALSVFKEMVTGDRVVWNSII 128
L +K +H+ I K+GL SD++V +ALID YS+ G L +A+ +F++M D V WNS++
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS-LLELGRQAHVHVLKFDQ 187
+ + +A L+ +M + + + L R C MS EL + ++
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYAR-CREMSKAFELFEKMP------ER 245
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVV--KDVISWSTMIAGLAQNGFSLEALKLFDS 245
+ + + ++ Y K G +E A+ +F++M + K+V++W+ +IAG A+ G EA +L D
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGW--HYFRSMKNLYGIDPGREHY--GCMLDLL 301
M G + + ++ +L AC+ +GL+ G H NL G Y +LD+
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNL-----GSNAYVLNALLDMY 360
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ G L + +++ K D+V+W T+L H
Sbjct: 361 AKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVH 394
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 27/293 (9%)
Query: 65 LRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
L C L+ +KQ+H+ I++ L D+ + LI S + A+ VF ++ + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV-- 182
NS+I A AQ+S +A +++ +M+R G AD T +L+AC+G S L + + H H+
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 183 LKFDQDLILHNALLDMYCKCGSL--EDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
L D+ + NAL+D Y +CG L DA +F +M +D +SW++M+ GL + G +A
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
+LFD M P+ + I+ +L + + + F M + + M+
Sbjct: 206 RLFDEM----PQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTMVMG 256
Query: 301 LGRAGKLDDMVKLIHEMNCKP--DVVTWRTLLDACRAHRNVDLATYAAKEILK 351
+AG + +M +++ + P +VVTW + +A YA K +LK
Sbjct: 257 YSKAGDM-EMARVMFDKMPLPAKNVVTWTII-----------IAGYAEKGLLK 297
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 47/310 (15%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF------------- 48
Y + + +A +F++MPERN VSW+TM+ YS K D M ++F
Sbjct: 226 YARCREMSKAFELFEKMPERNTVSWSTMVMGYS--KAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 49 ----------------------MLREGVMPNMFTFSSVLRACE---YLSDIKQIHSSILK 83
M+ G+ + S+L AC LS +IHS + +
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKR 343
Query: 84 VGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYL 143
L S+ +V +AL+D+Y+K G L +A VF ++ D V WN+++ H G EA+ L
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLIL----HNALLDMY 199
+ +MRR G D+ T +VL +C L++ G + + ++ DL+ + L+D+
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGCLVDLL 462
Query: 200 CKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-RPNYIT 257
+ G L++A + M ++ +V+ W ++ + A ++ D++ + P P +
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 258 ILGVLFACSH 267
+L ++A +
Sbjct: 523 LLSNIYAAAE 532
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L++A VF+++P++++VSW TM+ A++L M REG+ P+ T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +VL +C + I + S+ KV L V L+D+ ++G L EA+ V + M
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEA 140
+ + V+W +++ A H++ D A
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIA 503
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 253/460 (55%), Gaps = 36/460 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M+ +E A+ VFDE P R++VSW +I+ Y + ++A+ + M EGV P+ T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE-- 115
++ +C L D+ K+ + + + GL + + +AL+D++SK G++ EA +F
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 116 ---------MVTG--------------------DRVVWNSIIAAFAQHSDGDEALYLYKK 146
M++G D V+WN++I Q G +AL L+++
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL--ILHNALLDMYCKCGS 204
M+ + D+ T+ L AC+ + L++G H ++ K+ L L +L+DMY KCG+
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 205 LEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
+ +A +F+ + ++ ++++ +I GLA +G + A+ F+ M G P+ IT +G+L A
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
C H G++ G YF MK+ + ++P +HY M+DLLGRAG L++ +L+ M + D
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 325 TWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
W LL CR H NV+L AAK++L+LD D+G YVLL Y + MW D RR M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 385 VKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
+G+ K PGCS IEV+ + FI+ DKS P+ ++I +L+
Sbjct: 620 ERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLH 659
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 168/368 (45%), Gaps = 41/368 (11%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM---PNMFTFSSVLRACE--YLSDIKQ 76
N+ SW I +S + + L MLR G P+ FT+ + + C LS +
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 77 -IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
I +LK+ LE V +A I +++ G++ A VF E D V WN +I + +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 136 DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHN 193
+ ++A+Y+YK M G D T+ ++ +C+ + L G++ + +V + + L N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF------------------ 235
AL+DM+ KCG + +A+ IF+ + + ++SW+TMI+G A+ G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 236 -------------SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK 282
+AL LF M+ +P+ IT++ L ACS G +D G R ++
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 283 NLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
Y + ++D+ + G + + + + H + + + +T+ ++ H + A
Sbjct: 417 K-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
Query: 343 TYAAKEIL 350
E++
Sbjct: 475 ISYFNEMI 482
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGE---LLEALSVFKEMVTG 119
S+L C+ L +KQI + ++ GL D F S LI + L E L ++ + K +
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSVKILKGIENP 116
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGF---PADQSTLTSVLRACTGMSLLELGR 176
+ WN I F++ + E+ LYK+M R G D T + + C + L LG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 177 QAHVHVLKFDQDLI--LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
HVLK +L+ +HNA + M+ CG +E+A+ +F+ V+D++SW+ +I G + G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A+ ++ M+ G +P+ +T++G++ +CS G ++ G ++ +K G+
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE-NGLRMTIPLV 295
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D+ + G + + ++ + K +V+W T++
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISG 332
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 227/384 (59%), Gaps = 5/384 (1%)
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T++ +L+ C+ + K+IH+ + VG + +++ L+ +Y+ G+L A +F+ +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + WN++I+ + Q E L++Y MR+ DQ T SV RAC+ + LE G+
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+AH ++K ++I+ +AL+DMY KC S D +F+++ ++VI+W+++I+G +G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
E LK F+ MK G RPN +T L VL AC+H GLVD GW +F SMK YGI+P +HY
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
M+D LGRAG+L + + + + CK W +LL ACR H NV L AA + L+LD
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 409
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
+ G YV+ +N YA+ + ++VRR M G++K+PG S IE+ ++H F+ D SH
Sbjct: 410 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHR 469
Query: 415 QIDEISRQLNQFISRLTGAGYVPD 438
++I +++++ S Y PD
Sbjct: 470 LSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 21/297 (7%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L+ A ++F + R+++ W MIS Y L + + M + ++P+ +TF+SV RA
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 68 CEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C L + K+ H+ ++K ++S++ V SAL+D+Y K + VF ++ T + + W
Sbjct: 219 CSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITW 278
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
S+I+ + H E L ++KM+ G + T VL AC L++ G + H + +K
Sbjct: 279 TSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMK 337
Query: 185 FDQDLIL----HNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQNG----F 235
D + + A++D + G L++A +F+ + W +++ +G
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLL 397
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI--DPG 290
L A K + G NY+ +C GL + R M+N G+ DPG
Sbjct: 398 ELAATKFLELDPTNG--GNYVVFANGYASC---GLREAASKVRRKMENA-GVKKDPG 448
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + + VFD++ RNV++WT++IS Y +K M EG PN T
Sbjct: 253 MYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVT 312
Query: 61 FSSVLRACEY--LSDIKQIHSSILK--VGLESDVFVRSALIDVYSKLGELLEALS-VFKE 115
F VL AC + L D H +K G+E + +A++D + G L EA V K
Sbjct: 313 FLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKS 372
Query: 116 MVTGDRVVWNSIIAAFAQHSD 136
VW S++ A H +
Sbjct: 373 PCKEHPPVWGSLLGACRIHGN 393
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 238/397 (59%), Gaps = 11/397 (2%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFTFSSVLRAC 68
+A+ VFDEMPE +V+ WT ++SA+S L + A+ L M R +G++P+ TF +VL AC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 69 EYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
L +KQ IH ++ G+ S+V V S+L+D+Y K G + EA VF M + V W+
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF 185
+++ + Q+ + ++A+ ++++M D +VL+AC G++ + LG++ H ++
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 186 D--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
++I+ +AL+D+Y K G ++ A ++++M ++++I+W+ M++ LAQNG EA+ F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
+ M G +P+YI+ + +L AC H G+VD+G +YF M YGI PG EHY CM+DLLGR
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVD-LATYAAKEILKLDAEDTGAYVL 362
AG ++ L+ C+ D W LL C A+ + +A AK +++L+ + +YVL
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
LSN Y D +R+ M +G+ K G SWI+
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 183/337 (54%), Gaps = 24/337 (7%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+ E + VFD ++ +SWT+M+S Y + K + +A+++ V M+ G+ N FT SS ++A
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 68 CEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C L +++ H ++ G E + F+ S L +Y E ++A VF EM D + W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
++++AF+++ +EAL L+ M R G D ST +VL AC + L+ G++ H ++
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI 292
Query: 184 K--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
++++ ++LLDMY KCGS+ +A+ +FN M K+ +SWS ++ G QNG +A++
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG------ 295
+F M+ + VL AC+ G R K ++G R +G
Sbjct: 353 IFREME----EKDLYCFGTVLKACA-------GLAAVRLGKEIHGQYVRRGCFGNVIVES 401
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++DL G++G +D ++ +M+ + +++TW +L A
Sbjct: 402 ALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 126/240 (52%), Gaps = 11/240 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + EA+ VF+ M ++N VSW+ ++ Y +++A+++ RE +++
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI----FREMEEKDLYC 364
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F +VL+AC L+ + K+IH ++ G +V V SALID+Y K G + A V+ +M
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ + WN++++A AQ+ G+EA+ + M + G D + ++L AC +++ GR
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 178 AHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIAGLAQN 233
V + K ++ ++D+ + G E+A+ + R ++ S W ++ A N
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 61 FSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGE-LLEALSVFKE 115
++S+L+ C ++ I Q H+ ++K GLE+D V ++L+ +Y KLG + E VF
Sbjct: 64 YASLLQTCNKVFSFIHGI-QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D + W S+++ + + +AL ++ +M G A++ TL+S ++AC+ + + LG
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
R H V+ F+ + + + L +Y DA+ +F+ M DVI W+ +++ ++N
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 234 GFSLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
EAL LF +M + G P+ T VL AC + + G + GI
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-NGIGSNVV 301
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+LD+ G+ G + + ++ + M+ K + V+W LL
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 45/297 (15%)
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALL 196
EA+ + + PA S+L+ C + G Q H HV+K + D + N+LL
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 197 DMYCKCG-SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNY 255
+Y K G + + + +F+ VKD ISW++M++G ++AL++F M G N
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 256 ITILGVLFACSHAGLVDDG-------------WHYF--RSMKNLYGI------------- 287
T+ + ACS G V G W++F ++ LYG+
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 288 --DPGREHYGCMLDLLGRAGKLDDMVKLIHEMN----CKPDVVTWRTLLDACRAHRNVDL 341
+P + +L + ++ + L + M+ PD T+ T+L AC R +
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK- 282
Query: 342 ATYAAKEIL-KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRV-KGIRKEPGCSW 396
KEI KL G+ V++ ++ + M+ VR +V G+ K+ SW
Sbjct: 283 ---QGKEIHGKLITNGIGSNVVVESSLLD--MYGKCGSVREARQVFNGMSKKNSVSW 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K ++ A V+ +M RN+++W M+SA + + A+ M+++G+ P+ +
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYIS 465
Query: 61 FSSVLRACEYLSDIKQIHSSIL----KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F ++L AC + + + + + G++ S +ID+ + G EA ++ +
Sbjct: 466 FIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERA 525
Query: 117 -VTGDRVVWNSIIAAFAQHSD 136
D +W ++ A ++D
Sbjct: 526 ECRNDASLWGVLLGPCAANAD 546
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 234/416 (56%), Gaps = 11/416 (2%)
Query: 25 SWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY---LSDIKQIHSSI 81
+W + YSS ++ + M R G+ PN TF +L+AC L+ +QI +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
LK G + DV+V + LI +Y + +A VF EM + V WNSI+ A ++ +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMY 199
+ +M F D++T+ +L AC G L LG+ H V+ + + + L AL+DMY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 200 CKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITI 258
K G LE A+ +F RMV K+V +WS MI GLAQ GF+ EAL+LF M K RPNY+T
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
LGVL ACSH GLVDDG+ YF M+ ++ I P HYG M+D+LGRAG+L++ I +M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 319 CKPDVVTWRTLLDACRAHRNVD---LATYAAKEILKLDAEDTGAYVLLSNTYANSKMWND 375
+PD V WRTLL AC H + D + K +++L+ + +G V+++N +A ++MW +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 376 VAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLT 431
AEVRR M+ ++K G S +E+ H F G + I L+ F +LT
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQLT 493
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 8/229 (3%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC- 68
+A+ VFDEM ERNVVSW ++++A + + M+ + P+ T +L AC
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 69 EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSII 128
LS K +HS ++ LE + + +AL+D+Y+K G L A VF+ MV + W+++I
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMI 285
Query: 129 AAFAQHSDGDEALYLYKK-MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH----VL 183
AQ+ +EAL L+ K M+ + + T VL AC+ L++ G + + H +
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYK-YFHEMEKIH 344
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLA 231
K +I + A++D+ + G L +A +M + D + W T+++ +
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACS 393
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
MY K LE A++VF+ M ++NV +W+ MI + + A++L M++E V PN
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 60 TFSSVLRAC----------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEA 109
TF VL AC +Y ++++IH ++ + A++D+ + G L EA
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHK------IKPMMIHYGAMVDILGRAGRLNEA 369
Query: 110 LSVFKEM-VTGDRVVWNSIIAAFAQHSDGDE 139
K+M D VVW ++++A + H D D+
Sbjct: 370 YDFIKKMPFEPDAVVWRTLLSACSIHHDEDD 400
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 253/435 (58%), Gaps = 6/435 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K NL F M +++++SWTT+I+ Y+ + A++L + ++ + +
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 61 FSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+LRA L +K+IH IL+ GL D +++ L+DVY K + A VF+ +
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W S+I++ A + + EA+ L+++M G AD L +L A +S L GR+
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 608
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++L+ F + + A++DMY CG L+ AK +F+R+ K ++ +++MI +G
Sbjct: 609 IHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 668
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A++LFD M+ P++I+ L +L+ACSHAGL+D+G + + M++ Y ++P EHY
Sbjct: 669 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 728
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++D+LGRA + + + + M +P W LL ACR+H ++ AA+ +L+L+ +
Sbjct: 729 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ G VL+SN +A WNDV +VR M+ G+ K PGCSWIE+D ++H F DKSHP+
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 848
Query: 416 IDEISRQLNQFISRL 430
EI +L++ +L
Sbjct: 849 SKEIYEKLSEVTRKL 863
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 18/293 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L++A+ VFDEMP+R +W TMI AY S A+ L M EGV + +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F ++L+AC L DI+ ++HS ++K+G S F+ +AL+ +Y+K +L A +F
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
GD V+WNSI+++++ E L L+++M G + T+ S L AC G S +LG+
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 177 QAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H VLK +L + NAL+ MY +CG + A+ I +M DV++W+++I G QN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACS-----------HAGLVDDGW 275
EAL+ F M G + + +++ ++ A HA ++ GW
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 145/250 (58%), Gaps = 7/250 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY K + L A+ +FD E+ + V W +++S+YS+ + ++L M G PN +
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 60 TFSSVLRACE---YLSDIKQIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVFKE 115
T S L AC+ Y K+IH+S+LK S+++V +ALI +Y++ G++ +A + ++
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M D V WNS+I + Q+ EAL + M AG +D+ ++TS++ A +S L G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H +V+K +D +L + N L+DMY KC F RM KD+ISW+T+IAG AQN
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 234 GFSLEALKLF 243
+EAL+LF
Sbjct: 466 DCHVEALELF 475
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 24/286 (8%)
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKV--GLESDVFVRSALIDVYSKLGELLEALSVFK 114
F+ VL C +S +Q+HS I K E D F+ L+ +Y K G L +A VF
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
EM WN++I A+ + + AL LY MR G P S+ ++L+AC + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLA 231
G + H ++K + + NAL+ MY K L A+ +F+ K D + W+++++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG----- 286
+G SLE L+LF M + GP PN TI+ L AC DG+ Y + K ++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTAC-------DGFSYAKLGKEIHASVLKS 313
Query: 287 IDPGREHYGC--MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
E Y C ++ + R GK+ +++ +MN DVVTW +L+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 225/386 (58%), Gaps = 7/386 (1%)
Query: 51 REGVMPNMFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELL 107
R+G + + SS +R+C D + H LK G SDV++ S+L+ +Y GE+
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 108 EALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT 167
A VF+EM + V W ++I+ FAQ D L LY KMR++ + T T++L ACT
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 168 GMSLLELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWST 225
G L GR H L LH N+L+ MYCKCG L+DA IF++ KDV+SW++
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 226 MIAGLAQNGFSLEALKLFD-SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL 284
MIAG AQ+G +++A++LF+ M G +P+ IT LGVL +C HAGLV +G +F M
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE- 351
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATY 344
+G+ P HY C++DLLGR G L + ++LI M KP+ V W +LL +CR H +V
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR 411
Query: 345 AAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIH 404
AA+E L L+ + +V L+N YA+ W + A VR+ M+ KG++ PGCSWIE++ +
Sbjct: 412 AAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVF 471
Query: 405 AFILGDKSHPQIDEISRQLNQFISRL 430
F D S+ ++ EI L+ I +
Sbjct: 472 MFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 129/236 (54%), Gaps = 11/236 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y +E A VF+EMPERNVVSWT MIS ++ D +KL M + PN +T
Sbjct: 164 LYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYT 223
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+++L AC L + +H L +GL+S + + ++LI +Y K G+L +A +F +
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYK-KMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WNS+IA +AQH +A+ L++ M ++G D T VL +C L++ GR
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 177 Q----AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMI 227
+ H LK +L ++ L+D+ + G L++A + M +K + + W +++
Sbjct: 344 KFFNLMAEHGLK--PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-REGVMPNMF 59
MY K L++A +FD+ ++VVSW +MI+ Y+ L +A++L M+ + G P+
Sbjct: 265 MYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAI 324
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ VL +C + +K+ + + + GL+ ++ S L+D+ + G L EAL + + M
Sbjct: 325 TYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENM 384
Query: 117 -VTGDRVVWNSIIAAFAQHSD 136
+ + V+W S++ + H D
Sbjct: 385 PMKPNSVIWGSLLFSCRVHGD 405
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 246/456 (53%), Gaps = 41/456 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY +F + A+ +FD M ER+ VSW +I+ Y+S + A +L M GV ++ T
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 61 FSSV-----------------------------------LRACEYLSDI---KQIHSSIL 82
++ + L+AC + I K+IH +
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
+ VR+ LI +YSK +L AL VF++ WNSII+ +AQ + +EA +
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 143 LYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMY 199
L ++M AGF + TL S+L C ++ L+ G++ H ++L+ F +L N+L+D+Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 200 CKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITIL 259
K G + AK + + M +D ++++++I G G AL LF M G +P+++T++
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVV 487
Query: 260 GVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNC 319
VL ACSH+ LV +G F M+ YGI P +H+ CM+DL GRAG L +IH M
Sbjct: 488 AVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPY 547
Query: 320 KPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEV 379
KP TW TLL+AC H N + +AA+++L++ E+ G YVL++N YA + W+ +AEV
Sbjct: 548 KPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEV 607
Query: 380 RRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
R MR G++K+PGC+WI+ D F +GD S P+
Sbjct: 608 RTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPE 643
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 41/371 (11%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y FNL EAQ + + + + W +I++Y+ +L + + M+ +G+ P+ FT+
Sbjct: 88 YSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTY 147
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
SVL+AC D+ + +H SI +S ++V +ALI +Y + + A +F M
Sbjct: 148 PSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFE 207
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKM------------------------------- 147
D V WN++I +A EA L+ KM
Sbjct: 208 RDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGL 267
Query: 148 --RRAGFPA--DQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLI--LHNALLDMYCK 201
R FP D + L+AC+ + + LG++ H + D I + N L+ MY K
Sbjct: 268 ISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSK 327
Query: 202 CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
C L A +F + + +W+++I+G AQ S EA L M V G +PN IT+ +
Sbjct: 328 CKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASI 387
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP 321
L C+ + G + + + ++D+ ++GK+ K + ++ K
Sbjct: 388 LPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDLMSKR 446
Query: 322 DVVTWRTLLDA 332
D VT+ +L+D
Sbjct: 447 DEVTYTSLIDG 457
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 58 MFTFSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
+ + +S+L AC +L+ + Q+H+ + G+E + L+ YS EA S+
Sbjct: 43 LHSAASLLSACVDVRAFLAGV-QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSII 101
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ + WN +IA++A++ +E + YK+M G D T SVL+AC +
Sbjct: 102 ENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 161
Query: 174 LGRQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
GR H + V + L + NAL+ MY + ++ A+ +F+RM +D +SW+ +I A
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL-YGIDP 289
G EA +LFD M G + IT + C G M+N +DP
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 227/393 (57%), Gaps = 11/393 (2%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY--- 70
VF EMP R+VVSWT +I+ ++ L A+ M V PN+ T+ VL +
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGC 219
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
LS K IH ILK + +ALID+Y K +L +A+ VF E+ D+V WNS+I+
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 131 FAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQ 187
EA+ L+ M+ +G D LTSVL AC + ++ GR H ++L
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
D + A++DMY KCG +E A IFN + K+V +W+ ++ GLA +G LE+L+ F+ M
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL-YGIDPGREHYGCMLDLLGRAGK 306
+G +PN +T L L AC H GLVD+G YF MK+ Y + P EHYGCM+DLL RAG
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 307 LDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNV-DLATYAAKEILKLDAEDTGAYVLLSN 365
LD+ ++L+ M KPDV +L AC+ + +L L ++ ED+G YVLLSN
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 366 TYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIE 398
+A ++ W+DVA +RR M+VKGI K PG S+IE
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 152/318 (47%), Gaps = 11/318 (3%)
Query: 25 SWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSI 81
S+ T++S+Y+ + + G P+MFTF V +AC S I KQIH +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
K+G D++V+++L+ Y GE A VF EM D V W II F + EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 142 YLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILH--NALLDMY 199
+ KM + +T VL + + L LG+ H +LK + L NAL+DMY
Sbjct: 193 DTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 200 CKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKV-MGPRPNYITI 258
KC L DA +F + KD +SW++MI+GL S EA+ LF M+ G +P+ +
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
VL AC+ G VD G + GI ++D+ + G ++ +++ + +
Sbjct: 310 TSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 319 CKPDVVTWRTLLDACRAH 336
K +V TW LL H
Sbjct: 369 SK-NVFTWNALLGGLAIH 385
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM-LREGVMPNMF 59
MYVK L +A VF E+ +++ VSW +MIS + + A+ L M G+ P+
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+SVL AC L + + +H IL G++ D + +A++D+Y+K G + AL +F +
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + WN+++ A H G E+L +++M + GF + T + L AC L++ GR
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Query: 177 QAHVHVLKFDQ-----DLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGL 230
+ + H +K + L + ++D+ C+ G L++A + M VK DV +++
Sbjct: 428 R-YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC 486
Query: 231 AQNGFSLEALK 241
G +E K
Sbjct: 487 KNRGTLMELPK 497
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 227/405 (56%), Gaps = 6/405 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + +E AQ VFDE+P RN V W ++ Y + +L M G+ + T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 61 FSSVLRACE--YLSDI-KQIHS-SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+++AC + + K +H SI + ++ ++++++ID+Y K L A +F+
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETS 272
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V + V+W ++I+ FA+ EA L+++M R +Q TL ++L +C+ + L G+
Sbjct: 273 VDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGK 332
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++++ + D + + +DMY +CG+++ A+ +F+ M ++VISWS+MI NG
Sbjct: 333 SVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
EAL F MK PN +T + +L ACSH+G V +GW F SM YG+ P EHY
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY 452
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
CM+DLLGRAG++ + I M KP W LL ACR H+ VDLA A+++L ++
Sbjct: 453 ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEP 512
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
E + YVLLSN YA++ MW V VRR M +KG RK G S EV
Sbjct: 513 EKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 178/342 (52%), Gaps = 14/342 (4%)
Query: 2 YVKFNLLEEAQVVFDEMP--ERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPN 57
Y++ N L+ A F+ +P +RN SW T++S YS K + LL++ M R +
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 58 MFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
F ++AC L ++ IH +K GL+ D +V +L+++Y++LG + A VF
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
E+ + V+W ++ + ++S E L+ MR G D TL +++AC + ++
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 175 GRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
G+ H ++ DQ L +++DMY KC L++A+ +F V ++V+ W+T+I+G A
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM-KNLYGIDPG 290
+ ++EA LF M PN T+ +L +CS G + G M +N GI+
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN--GIEMD 346
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ +D+ R G + M + + +M + +V++W ++++A
Sbjct: 347 AVNFTSFIDMYARCGNI-QMARTVFDMMPERNVISWSSMINA 387
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 137/278 (49%), Gaps = 11/278 (3%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT--GD 120
++L + L+ +Q+H+ ++ G E +V + S+L + Y + L A S F + +
Sbjct: 12 TILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRN 71
Query: 121 RVVWNSIIAAFAQHSDG--DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
R WN+I++ +++ + L LY +MRR D L ++AC G+ LLE G
Sbjct: 72 RHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILI 131
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K D+D + +L++MY + G++E A+ +F+ + V++ + W ++ G +
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD 191
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSH--AGLVDDGWHYFRSMKNLYGIDPGREHY 294
E +LF M+ G + +T++ ++ AC + AG V H ++ ID
Sbjct: 192 PEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF--IDQSDYLQ 249
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D+ + LD+ KL E + +VV W TL+
Sbjct: 250 ASIIDMYVKCRLLDNARKLF-ETSVDRNVVMWTTLISG 286
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 244/443 (55%), Gaps = 43/443 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+++K L A+ VFDE+P+ + ++ MIS Y L + L+ M G + +T
Sbjct: 78 LHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYT 137
Query: 61 FSSVLRACEYLSDI--------KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
S VL+A + +H+ I+K +E D + +AL+D Y K G+L A +V
Sbjct: 138 LSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 113 FK-----------EMVTG--------------------DRVVWNSIIAAFAQHSD-GDEA 140
F+ M++G D VV+N+++ F++ + +
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 141 LYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDM 198
+ +Y M+RAGF + ST SV+ AC+ ++ E+G+Q H ++K + + ++LLDM
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y KCG + DA+ +F++M K+V SW++MI G +NG EAL+LF MK PNY+T
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
LG L ACSH+GLVD G+ F SM+ Y + P EHY C++DL+GRAG L+ + M
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED-TGAYVLLSNTYANSKMWNDVA 377
+PD W LL +C H NV+LA+ AA E+ KL+A+ GAY+ LSN YA++ W++V+
Sbjct: 438 ERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVS 497
Query: 378 EVRRTMRVKGIRKEPGCSWIEVD 400
++R M+ + I K G SW D
Sbjct: 498 KIREVMKRRRISKTIGRSWTSED 520
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 63/318 (19%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
K+IH+ I+K G + D+ + L+ ++ K G L A VF E+ +N +I+ + +H
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLL---ELGRQAHVHVLKFDQDL 189
E L L ++M +G AD TL+ VL+A G +++ L R H ++K D +L
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 190 --ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+L AL+D Y K G LE A+ +F M ++V+ ++MI+G GF +A ++F++ K
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 248 V--------------------------------MGPRPNYITILGVLFACS--------- 266
V G PN T V+ ACS
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 267 --HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
HA ++ G + M + +LD+ + G ++D ++ +M K +V
Sbjct: 294 QVHAQIMKSGVYTHIKMGS------------SLLDMYAKCGGINDARRVFDQMQEK-NVF 340
Query: 325 TWRTLLDACRAHRNVDLA 342
+W +++D + N + A
Sbjct: 341 SWTSMIDGYGKNGNPEEA 358
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 238/419 (56%), Gaps = 4/419 (0%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+K ++EA+V+F +M +R+V+ WTTM++ ++ + +A++ M EG +
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+L+A L D K +H + + GL +V V ++L+D+Y+K+G + A VF M+
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V W S+I+ FAQ+ ++A +M+ GF D TL VL AC+ + L+ GR
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRL 339
Query: 178 AHVHVLKFDQ-DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H ++LK D + AL+DMY KCG+L ++ IF + KD++ W+TMI+ +G
Sbjct: 340 VHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
E + LF M P++ T +L A SH+GLV+ G H+F M N Y I P +HY C
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
++DLL RAG++++ + +I+ + W LL C HRN+ + AA +IL+L+ +
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDS 519
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
G L+SN +A + W +VA+VR+ MR + K PG S IEV+ ++ F++ D SH +
Sbjct: 520 IGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHE 578
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 181/333 (54%), Gaps = 8/333 (2%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE- 69
A+ VFDE+P+R V + +MI YS K D ++L M+ E + P+ TF+ ++AC
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 70 --YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
L + + + G ++DVFV S+++++Y K G++ EA +F +M D + W ++
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTM 188
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--F 185
+ FAQ +A+ Y++M+ GF D+ + +L+A + ++GR H ++ +
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGL 248
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
++++ +L+DMY K G +E A +F+RM+ K +SW ++I+G AQNG + +A +
Sbjct: 249 PMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVE 308
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
M+ +G +P+ +T++GVL ACS G + G + + +D R ++D+ + G
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD--RVTATALMDMYSKCG 366
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRN 338
L + I E + D+V W T++ H N
Sbjct: 367 ALSSS-REIFEHVGRKDLVCWNTMISCYGIHGN 398
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
Query: 74 IKQIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFA 132
I QIH+ ++ G L + + LI ++GE+ A VF E+ V+NS+I ++
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLI 190
+ + DE L LY +M D ST T ++AC +LE G + F D+
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 191 LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG 250
+ +++L++Y KCG +++A+ +F +M +DVI W+TM+ G AQ G SL+A++ + M+ G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 251 PRPNYITILGVLFACSHAG 269
+ + +LG+L A G
Sbjct: 213 FGRDRVVMLGLLQASGDLG 231
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 233/402 (57%), Gaps = 5/402 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K LEE+ +F +P ++ W +MIS ++ A+ L ML +G P+ T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 61 FSSVLRACEY---LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++VL C L K+IH L+ G++ + + SAL+++YSK G L A V+ +
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V +S+I+ ++QH + L++ M +GF D ++S+L+A LG Q
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++ K + + ++LL MY K GS++D F+++ D+I+W+ +IA AQ+G
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ EAL++++ MK G +P+ +T +GVL ACSH GLV++ + + SM YGI+P HY
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+D LGR+G+L + I+ M+ KPD + W TLL AC+ H V+L AAK+ ++L+
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS 853
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
D GAY+ LSN A W++V E R+ M+ G++KEPG S +
Sbjct: 854 DAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 183/347 (52%), Gaps = 9/347 (2%)
Query: 1 MYVKFNLLEEAQVVF---DEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
MY K ++ ++ VF D++ +N+V+ MI+++S K +A++L ML+EG+ +
Sbjct: 395 MYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTD 452
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ S+L + L+ KQ+H LK GL D+ V S+L +YSK G L E+ +F+ +
Sbjct: 453 EFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIP 512
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D W S+I+ F ++ EA+ L+ +M G D+STL +VL C+ L G++
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + L+ D+ + L +AL++MY KCGSL+ A+ +++R+ D +S S++I+G +Q+G
Sbjct: 573 IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGL 632
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ LF M + G + I +L A + + G + + G+
Sbjct: 633 IQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKI-GLCTEPSVGS 691
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+L + + G +DD K ++N PD++ W L+ + H + A
Sbjct: 692 SLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKANEA 737
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 17/345 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNM 58
+Y K + EA VF +P +VVSWT M+S Y+ K ND L +F M GV N
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT--KSNDAFSALEIFKEMRHSGVEINN 351
Query: 59 FTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T +SV+ AC + + Q+H+ + K G D V +ALI +YSK G++ + VF++
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 116 MVTGDRV-VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
+ R + N +I +F+Q +A+ L+ +M + G D+ ++ S+L + L L
Sbjct: 412 LDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNL 468
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G+Q H + LK DL + ++L +Y KCGSLE++ +F + KD W++MI+G +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFAC-SHAGLVDDGWHYFRSMKNLYGIDPGR 291
G+ EA+ LF M G P+ T+ VL C SH L + +++ GID G
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA--GIDKGM 586
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ ++++ + G L + + +++ + D V+ +L+ H
Sbjct: 587 DLGSALVNMYSKCGSL-KLARQVYDRLPELDPVSCSSLISGYSQH 630
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 141/276 (51%), Gaps = 8/276 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + +A +FD +P+ +VVS MIS Y +L + +++ M G N ++
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 62 SSVLRACEYL-----SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
SV+ AC L S++ H+ +K+G V SALIDV+SK +A VF++
Sbjct: 154 GSVISACSALQAPLFSELVCCHT--IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
++ + WN+IIA ++ + L+ +M D T +SVL AC + L G+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 177 QAHVHVLKFD-QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
V+K +D+ + A++D+Y KCG + +A +F+R+ V+SW+ M++G ++
Sbjct: 272 VVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLV 271
+ AL++F M+ G N T+ V+ AC +V
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 172/371 (46%), Gaps = 43/371 (11%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
E+A VF + NV W T+I+ + L M P+ +T+SSVL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 68 CEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C L + K + + ++K G E DVFV +A++D+Y+K G + EA+ VF + V W
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
+++ + + +D AL ++K+MR +G + T+TSV+ AC S++ Q H V K
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIF---NRMVVKDVISWSTMIAGLAQNGFSLEA 239
F D + AL+ MY K G ++ ++ +F + + ++++ + MI +Q+ +A
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKA 437
Query: 240 LKLFDSMKVMGPRPNYITILGVL--FACSH-----------AGLVDD---GWHYF----- 278
++LF M G R + ++ +L C + +GLV D G F
Sbjct: 438 IRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 279 -----RSMKNLYGIDPGREH--YGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRT 328
S K GI P +++ + M+ G L + + L EM PD T
Sbjct: 498 CGSLEESYKLFQGI-PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 329 LLDACRAHRNV 339
+L C +H ++
Sbjct: 557 VLTVCSSHPSL 567
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 158/373 (42%), Gaps = 38/373 (10%)
Query: 86 LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYK 145
L DVF+ +L+ YS G + +A +F + D V N +I+ + QH +E+L +
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL--ILHNALLDMYCKCG 203
KM GF A++ + SV+ AC+ + H +K ++ +AL+D++ K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
EDA +F + +V W+T+IAG +N LF M V +P+ T VL
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREH-YGC--MLDLLGRAGKLDDMVKLIHEMNCK 320
AC+ + F + I G E + C ++DL + G + + +++ +
Sbjct: 260 ACASLEKLR-----FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-N 313
Query: 321 PDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVR 380
P VV+W +L + ++A EI K +M + E+
Sbjct: 314 PSVVSWTVMLSGYTKSND----AFSALEIFK-------------------EMRHSGVEIN 350
Query: 381 RTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTN 440
I S + Q+HA++ KS +D S IS + +G + +
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVF--KSGFYLD--SSVAAALISMYSKSGDIDLSE 406
Query: 441 FVLQDLEGEQRED 453
V +DL+ QR++
Sbjct: 407 QVFEDLDDIQRQN 419
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 241/452 (53%), Gaps = 38/452 (8%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML--REGVMPNMFTFSSVLRAC 68
A +VF + +N W T+I +S + A+ + + ML V P T+ SV +A
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 69 EYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
L D +Q+H ++K GLE D F+R+ ++ +Y G L+EA +F M+ D V WN
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 126 SIIAAFAQHSDGDEA-------------------------------LYLYKKMRRAGFPA 154
S+I FA+ D+A L ++++M+
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIF 212
D T+ S+L AC + E GR H ++++ F+ + I+ AL+DMYCKCG +E+ +F
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
K + W++MI GLA NGF A+ LF ++ G P+ ++ +GVL AC+H+G V
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+FR MK Y I+P +HY M+++LG AG L++ LI M + D V W +LL A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 333 CRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEP 392
CR NV++A AAK + KLD ++T YVLLSN YA+ ++ + E R M+ + + KE
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 393 GCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
GCS IEVD ++H FI +HP+ EI L+
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 11/259 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
+ K L+++AQ +FDEMP+RN VSW +MIS + A+ + M + V P+ FT
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+L AC YL +Q IH I++ E + V +ALID+Y K G + E L+VF+
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
WNS+I A + + A+ L+ ++ R+G D + VL AC E+ R
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG--EVHRAD 379
Query: 179 HVHVLKFDQDLIL-----HNALLDMYCKCGSLEDAKFIFNRMVV-KDVISWSTMIAGLAQ 232
L ++ +I + ++++ G LE+A+ + M V +D + WS++++ +
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRK 439
Query: 233 NGFSLEALKLFDSMKVMGP 251
G A + +K + P
Sbjct: 440 IGNVEMAKRAAKCLKKLDP 458
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 42/271 (15%)
Query: 68 CEYLSDIKQIHSSILKVGLESDVFVRSALID-VYSKLGELLEALSVFKEMVTGDRVVWNS 126
C + ++KQIH+S++K GL SD S ++ + ++ A VF + + VWN+
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLT--SVLRACTGMSLLELGRQAHVHVLK 184
II F++ S + A+ ++ M + LT SV +A + GRQ H V+K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
+ D + N +L MY CG L +A IF M+ DV++W++MI G A+ G +A L
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
FD M P+ N GV + +G V + G
Sbjct: 215 FDEM----PQRN-----GVSWNSMISGFVRN----------------------------G 237
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
R DM + + E + KPD T +LL+AC
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +EE VF+ P++ + W +MI ++ +RAM L + R G+ P+ +
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 61 FSSVLRACEYLSDIKQIHSSIL----KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F VL AC + ++ + K +E + + +++V G L EA ++ K M
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Query: 117 -VTGDRVVWNSIIAA 130
V D V+W+S+++A
Sbjct: 422 PVEEDTVIWSSLLSA 436
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 217/378 (57%), Gaps = 7/378 (1%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSIL 82
W ++ +Y + A+++ + M+R V+P+ ++ V++A + D K++HS +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
++G D F S I +Y K GE A VF E WN+II +EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 143 LYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD----QDLILHNALLDM 198
++ M+R+G D T+ SV +C G+ L L Q H VL+ D+++ N+L+DM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y KCG ++ A IF M ++V+SWS+MI G A NG +LEAL+ F M+ G RPN IT
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 259 LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN 318
+GVL AC H GLV++G YF MK+ + ++PG HYGC++DLL R G+L + K++ EM
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAE 378
KP+V+ W L+ C +V++A + A +++L+ + G YV+L+N YA MW DV
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 379 VRRTMRVKGIRKEPGCSW 396
VR+ M+ K + K P S+
Sbjct: 445 VRKLMKTKKVAKIPAYSY 462
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 128/243 (52%), Gaps = 9/243 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K E A+ VFDE PER + SW +I + + A+++ V M R G+ P+ FT
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLE--SDVFVRSALIDVYSKLGELLEALSVFKE 115
SV +C L D+ Q+H +L+ E SD+ + ++LID+Y K G + A +F+E
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M + V W+S+I +A + + EAL +++MR G ++ T VL AC L+E G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 176 RQAHVHV---LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLA 231
+ + + + L + ++D+ + G L++AK + M +K +V+ W ++ G
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 232 QNG 234
+ G
Sbjct: 401 KFG 403
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+++L C L+ +++IH I RS ++D Y
Sbjct: 50 LATLLSNCTSLARVRRIHGDIF----------RSRILDQYPIA----------------- 82
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH- 179
+WN+I+ ++ +H +A+ +Y M R+ D+ +L V++A + LG++ H
Sbjct: 83 -FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 180 VHV-LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
V V L F D + + +YCK G E+A+ +F+ + + SW+ +I GL G + E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR-EHYGCM 297
A+++F MK G P+ T++ V +C G + + + + + +
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNV 339
+D+ G+ G++D + EM + +VV+W +++ A+ N
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQR-NVVSWSSMIVGYAANGNT 302
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 244/427 (57%), Gaps = 9/427 (2%)
Query: 2 YVKFNLLEEAQVVFDEMP-ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y + +A+ VFD + ++++SW +MI+ +S +L + A +L + M R V +++T
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKL--GELLEALSVFKE 115
++ +L AC E+ K +H ++K GLE +ALI +Y + G + +ALS+F+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ + D + WNSII FAQ ++A+ + +R + D +++LR+C+ ++ L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
+Q H K F + + ++L+ MY KCG +E A+ F ++ K ++W+ MI G AQ
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+G +L LF M + +++T +L ACSH GL+ +G M+ +Y I P E
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
HY +DLLGRAG ++ +LI M PD + +T L CRA +++AT A +L++
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 607
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKS 412
+ ED YV LS+ Y++ K W + A V++ M+ +G++K PG SWIE+ Q+ AF D+S
Sbjct: 608 EPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRS 667
Query: 413 HPQIDEI 419
+P +I
Sbjct: 668 NPLCQDI 674
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 23/344 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+KF L A ++FDEMP+R+ VSW TMIS Y+S + A L M R G + ++F
Sbjct: 45 YIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSF 104
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S +L+ + +Q+H ++K G E +V+V S+L+D+Y+K + +A FKE+
Sbjct: 105 SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE 164
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V WN++IA F Q D A +L M +A D T +L L +Q
Sbjct: 165 PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ 224
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRM-VVKDVISWSTMIAGLAQNG 234
H VLK ++ + NA++ Y CGS+ DAK +F+ + KD+ISW++MIAG +++
Sbjct: 225 VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHE 284
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG--IDPGRE 292
A +LF M+ + T G+L ACS G + K+L+G I G E
Sbjct: 285 LKESAFELFIQMQRHWVETDIYTYTGLLSACS-------GEEHQIFGKSLHGMVIKKGLE 337
Query: 293 HYGCMLDLLGR------AGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ L G ++D + L + K D+++W +++
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSII 380
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM-LREGVMPNMF 59
MY K +E+A F E+ E N VSW +I+ + V+ A LL M ++ V +
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 60 TFSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF+ +L + + + +KQ+H+ +LK+GL+ ++ + +A+I Y+ G + +A VF +
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ D + WNS+IA F++H + A L+ +M+R D T T +L AC+G G
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFG 324
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCK--CGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
+ H V+K +Q NAL+ MY + G++EDA +F + KD+ISW+++I G A
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
Q G S +A+K F ++ + + +L +CS + G ++ G
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNE 443
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHR----NVDLATYAAK 347
++ + + G ++ K +++ K V W ++ H ++DL +
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 348 EILKLD 353
+ +KLD
Sbjct: 504 QNVKLD 509
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 78 HSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDG 137
H +K G SD++V + ++D Y K G L A +F EM D V WN++I+ +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 138 DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNAL 195
++A L+ M+R+G D + + +L+ + +LG Q H V+K ++ ++ + ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 196 LDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ-----NGFSLEALKLFDSMKVM- 249
+DMY KC +EDA F + + +SW+ +IAG Q F L L + M
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 250 -GPRPNYITILGVLFACS-----HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
G +T+L C+ HA ++ G + ++ N M+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICN------------AMISSYAD 250
Query: 304 AGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHR 337
G + D ++ + D+++W +++ H
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHE 284
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 232/435 (53%), Gaps = 41/435 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM--LREGVMPNMF 59
Y + E++ +FD R V+ W +MIS Y + N+ M+ LV +R +
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIA---NNMKMEALVLFNEMRNETREDSR 319
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T ++V+ AC +L KQ+H K GL D+ V S L+D+YSK G +EA +F E+
Sbjct: 320 TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Query: 117 VTGDRVV-------------------------------WNSIIAAFAQHSDGDEALYLYK 145
+ D ++ WNS+ F+Q+ E L +
Sbjct: 380 ESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQ--AHVHVLKFDQDLILHNALLDMYCKCG 203
+M + P D+ +L+SV+ AC +S LELG Q A ++ D D ++ ++L+D+YCKCG
Sbjct: 440 QMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
+E + +F+ MV D + W++MI+G A NG EA+ LF M V G RP IT + VL
Sbjct: 500 FVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
AC++ GLV++G F SMK +G P +EH+ CM+DLL RAG +++ + L+ EM D
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG 619
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
W ++L C A+ + AA++I++L+ E++ AYV LS +A S W A VR+ M
Sbjct: 620 SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLM 679
Query: 384 RVKGIRKEPGCSWIE 398
R + K PG SW +
Sbjct: 680 RENNVTKNPGSSWTD 694
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 10/275 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y +++A+ VF+ + ++++SW +M + +S ++ M + + + +
Sbjct: 393 VYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVS 452
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSV+ AC +S + +Q+ + VGL+SD V S+LID+Y K G + VF MV
Sbjct: 453 LSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV 512
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WNS+I+ +A + G EA+ L+KKM AG Q T VL AC L+E GR+
Sbjct: 513 KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 178 AHVHVLKFDQDLIL----HNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
+K D + + ++D+ + G +E+A + M D WS+++ G
Sbjct: 573 L-FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITI-LGVLFACS 266
NG+ K + + + P + + L +FA S
Sbjct: 632 NGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 666
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 73/307 (23%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + + A+ +FDEMP+RN SW TMI Y + ++ L F +MP
Sbjct: 71 MYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGY--MNSGEKGTSLRFF----DMMP---- 120
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
E D + + ++ ++K GEL A +F M D
Sbjct: 121 --------------------------ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKD 154
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V NS++ + + +EAL L+K++ F AD TLT+VL+AC + L+ G+Q H
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 181 HVL--KFDQDLILHNALLDMYCKCGSLEDAKF---------------------------- 210
+L + D ++++L+++Y KCG L A +
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 211 ---IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
+F+R + VI W++MI+G N +EAL LF+ M+ R + T+ V+ AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIG 330
Query: 268 AGLVDDG 274
G ++ G
Sbjct: 331 LGFLETG 337
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 46/312 (14%)
Query: 162 VLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK 218
+L++C+ + L RQ + +LK +I+ N LL MY + G + A+ +F+ M +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
+ SW+TMI G +G +L+ FD M P + + V+ + AG + F
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRN 338
+M + +G +L+ G ++ ++L E+N D +T T+L AC
Sbjct: 148 NAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKACAELEA 202
Query: 339 VDLATYAAKEILKLDAE-DTGAYVLLSNTYAN----------------------SKMWND 375
+ +IL E D+ L N YA S + +
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG 262
Query: 376 VAEVRRTMRVKGI--RKEPGC---------SWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
A R +G+ RK C +I + ++ A +L ++ + E SR L
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLA 322
Query: 425 QFISRLTGAGYV 436
I+ G G++
Sbjct: 323 AVINACIGLGFL 334
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 242/434 (55%), Gaps = 18/434 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K +LE + VF +M ERNVVSWTTMIS+ D A+ + + M +GV PN TF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTF 375
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++ A + IK+ IH +K G S+ V ++ I +Y+K L +A F+++
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF 435
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL--GR 176
+ + WN++I+ FAQ+ EAL ++ P ++ T SVL A + + G+
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 177 QAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H H+LK + ++ +ALLDMY K G++++++ +FN M K+ W+++I+ + +G
Sbjct: 495 RCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHG 554
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ LF M P+ +T L VL AC+ G+VD G+ F M +Y ++P EHY
Sbjct: 555 DFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHY 614
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
CM+D+LGRAG+L + +L+ E+ P +++L +CR H NV + A+ +++
Sbjct: 615 SCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 674
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDK-----QIHAFILG 409
E +G+YV + N YA + W+ AE+R+ MR K + KE G SWI+V + F G
Sbjct: 675 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 734
Query: 410 DKSHPQIDEISRQL 423
DKSHP+ DEI R +
Sbjct: 735 DKSHPKSDEIYRMV 748
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 178/340 (52%), Gaps = 20/340 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A +F+ + + +VVSW T++S + N A+ +V M GV+ + FT
Sbjct: 120 MYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVRMKSAGVVFDAFT 176
Query: 61 FSSVLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+S+ L C +L + Q+ S+++K GLESD+ V ++ I +YS+ G A VF EM
Sbjct: 177 YSTALSFCVGSEGFLLGL-QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 117 VTGDRVVWNSIIAAFAQHSD-GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D + WNS+++ +Q G EA+ +++ M R G D + TSV+ C + L+L
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
RQ H +K ++ L + N L+ Y KCG LE K +F++M ++V+SW+TMI+
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD- 354
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGRE 292
+A+ +F +M+ G PN +T +G++ A + +G + +K + +P
Sbjct: 355 ----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ + L + L+D K ++ + ++++W ++
Sbjct: 411 N--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAMISG 447
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 120/217 (55%), Gaps = 9/217 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y KF LE+A+ F+++ R ++SW MIS ++ + A+K+ + E MPN +T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYT 474
Query: 61 FSSVLRACEYLSDI-----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
F SVL A + DI ++ H+ +LK+GL S V SAL+D+Y+K G + E+ VF E
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M ++ VW SII+A++ H D + + L+ KM + D T SVL AC +++ G
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 176 RQAH---VHVLKFDQDLILHNALLDMYCKCGSLEDAK 209
+ + V + ++ ++DM + G L++A+
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAE 631
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 163/340 (47%), Gaps = 33/340 (9%)
Query: 11 AQVVFDEMPERNVVSWTTMI--SAYSSVKLNDRAMKLLVFMLREGVMPNMF-------TF 61
A +FD +RN TT I S S++ N A L +F +E + F T
Sbjct: 27 AHKLFDGSSQRNA---TTSINHSISESLRRNSPARALSIF--KENLQLGYFGRHMDEVTL 81
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
L+AC D+K QIH G S V V +A++ +Y K G AL +F+ +V
Sbjct: 82 CLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V WN+I++ F D AL +M+ AG D T ++ L C G LG Q
Sbjct: 140 PDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG-F 235
V+K + DL++ N+ + MY + GS A+ +F+ M KD+ISW+++++GL+Q G F
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL---YGIDPGRE 292
EA+ +F M G ++++ V+ C H + R + L G + E
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCH----ETDLKLARQIHGLCIKRGYESLLE 312
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + G L+ + + H+M+ + +VV+W T++ +
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISS 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++E++ VF+EM ++N WT++ISAYSS + M L M++E V P++ T
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 61 FSSVLRACEYLSDIK---QIHSSILKV-GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F SVL AC + +I + +++V LE S ++D+ + G L EA + E+
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 117 VTG 119
G
Sbjct: 638 PGG 640
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 244/465 (52%), Gaps = 43/465 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+ E A VF EMP+R +W MIS ++ + + L ML P+ +TF
Sbjct: 148 YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTF 207
Query: 62 SSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLG------------- 104
SS++ AC S + +H+ +LK G S V +++++ Y+KLG
Sbjct: 208 SSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE 267
Query: 105 ------------------ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
E +AL VF + V W ++I + ++ DG++AL + +
Sbjct: 268 VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVE 327
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAH---VHVLKFDQDLILHNALLDMYCKCG 203
M ++G +D +VL AC+G++LL G+ H +H F + NAL+++Y KCG
Sbjct: 328 MMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC-GFQGYAYVGNALVNLYAKCG 386
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
+++A F + KD++SW+TM+ +G + +ALKL+D+M G +P+ +T +G+L
Sbjct: 387 DIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNC---- 319
CSH+GLV++G F SM Y I +H CM+D+ GR G L + L +
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD 506
Query: 320 KPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEV 379
+ +W TLL AC H + +L +K + + + ++VLLSN Y ++ W + +V
Sbjct: 507 SSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Query: 380 RRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
RR M +G++K PGCSWIEV Q+ F++GD SHP+++E+S LN
Sbjct: 567 RREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 180/416 (43%), Gaps = 84/416 (20%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
K + A+ VFD MPE + V+W TM+++YS + L+ A+ L + P+ ++F+
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 63 SVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
++L C L ++K +I S +++ G + + V ++LID+Y K + L A VF++M
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 120 DR---------------------------------VVWNSIIAAFAQHSDGDEALYLYKK 146
R WN +I+ A + L L+K+
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 147 MRRAGFPADQSTLTSVLRACTG-MSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCG 203
M + F D T +S++ AC+ S + GR H +LK + + N++L Y K G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 204 SLEDAKF-------------------------------IFNRMVVKDVISWSTMIAGLAQ 232
S +DA +F+ K++++W+TMI G +
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG--IDPG 290
NG +AL+ F M G ++ VL ACS L+ G K ++G I G
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-------KMIHGCLIHCG 367
Query: 291 REHYG----CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+ Y +++L + G + + + ++ K D+V+W T+L A H D A
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQA 422
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K ++EA F ++ +++VSW TM+ A+ L D+A+KL M+ G+ P+ T
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 61 FSSVLRACEYLSDIKQ---IHSSILK---VGLESDVFVRSALIDVYSKLGELLEA---LS 111
F +L C + +++ I S++K + LE D + +ID++ + G L EA +
Sbjct: 441 FIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV--TCMIDMFGRGGHLAEAKDLAT 498
Query: 112 VFKEMVT--GDRVVWNSIIAAFAQH 134
+ +VT + W +++ A + H
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTH 523
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 259/526 (49%), Gaps = 79/526 (15%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + +A +F EMP RN +SW MI +S + A+K+ +M RE P+ T
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 61 FSSVLRA--------------------------------------CEYLSDIKQIHSSIL 82
++SVL E LS +++H ++
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 83 KVGLESDVFVRSALIDVYSK-------------------------------LGELLEALS 111
K G E + R+ALI VY K G+L EALS
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 112 VFKEM--------VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
+F E+ V + V W S+I GD++L +++M+ + A+ T+ +L
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Query: 164 RACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI 221
C + L LGR+ H HV++ +++++ NAL++MY KCG L + +F + KD+I
Sbjct: 442 SICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLI 501
Query: 222 SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM 281
SW+++I G +GF+ +AL +FD M G P+ I ++ VL ACSHAGLV+ G F SM
Sbjct: 502 SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSM 561
Query: 282 KNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDL 341
+G++P +EHY C++DLLGR G L + +++ M +P V LL++CR H+NVD+
Sbjct: 562 SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDI 621
Query: 342 ATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDK 401
A A ++ L+ E TG+Y+LLSN Y+ W + A VR + K ++K G SWIEV K
Sbjct: 622 AEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKK 681
Query: 402 QIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLE 447
+ + F G + + I L +S + G D N DL+
Sbjct: 682 KKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 159/329 (48%), Gaps = 47/329 (14%)
Query: 1 MYVKFNLLEEAQVVFDEMPE---RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+Y + LL +A+ VF+ + ++ W +++ A S L + A++L M + G+ +
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 157
Query: 58 MFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ +LRAC YL + H+ ++++GL+ ++ V + L+ +Y K G + +A ++F
Sbjct: 158 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 217
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL----------- 163
EM +R+ WN +I F+Q D + A+ +++ M+R F D+ T TSVL
Sbjct: 218 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 277
Query: 164 ------------------------RACTGMSLLELGRQAHVHVLK--FDQDLILHNALLD 197
C + L + + H +V+K F++ L NAL+
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP----RP 253
+Y K G ++DA+ +F ++ K + SW+++I G EAL LF ++ M +
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA 397
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMK 282
N +T V+ C+ G DD YFR M+
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 156/360 (43%), Gaps = 57/360 (15%)
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSA-----LIDVYSKLGELLEALSVFKE 115
F +L C +Q+H+ +L SD RS LI VY++LG LL+A +VF+
Sbjct: 59 FDHLLGLCLTAQQCRQVHAQVLL----SDFIFRSGSLAANLISVYARLGLLLDARNVFET 114
Query: 116 M---VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
+ + D +WNSI+ A H + AL LY+ MR+ G D L +LRAC +
Sbjct: 115 VSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF 174
Query: 173 ELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
L R H V++ LH N LL +Y K G + DA +F M V++ +SW+ MI G
Sbjct: 175 GLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGF 234
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK-------- 282
+Q A+K+F+ M+ +P+ +T VL S G +D YF M+
Sbjct: 235 SQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG 294
Query: 283 ----------------------NLYGIDPGREHY----GCMLDLLGRAGKLDDMVKLIHE 316
+ Y I G E Y ++ + G+ GK+ D L +
Sbjct: 295 EALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 317 MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
+ K + +W +L+ + +D A E+ +++ + N AN W V
Sbjct: 355 IRNK-GIESWNSLITSFVDAGKLDEALSLFSELEEMNH--------VCNVKANVVTWTSV 405
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 249/444 (56%), Gaps = 9/444 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + L + + V + +RN+V+W ++IS Y+ + +A+ L M+ + + P+ FT
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+S + ACE + KQIH +++ + SD FV+++LID+YSK G + A +VF ++
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V WNS++ F+Q+ + EA+ L+ M + ++ T +V++AC+ + LE G+
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H H L +DL AL+DMY KCG L A+ +F M + ++SWS+MI +G
Sbjct: 527 VH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A+ F+ M G +PN + + VL AC H+G V++G +YF MK+ +G+ P EH+
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFA 644
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C +DLL R+G L + + I EM D W +L++ CR H+ +D+ ++ + +
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
DTG Y LLSN YA W + +R M+ ++K PG S IE+D+++ F G+++ Q
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQ 764
Query: 416 IDEISRQLNQFISRLTGAGYVPDT 439
DEI R L + LT +V D+
Sbjct: 765 TDEIYRFLGN-LQNLTNEEHVVDS 787
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 200/381 (52%), Gaps = 37/381 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L ++ +F+++ ++N VSWT MIS+Y+ + +++A++ M++ G+ PN+ T
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRS-ALIDVYSKLGELLEALSVFKEM 116
SVL +C + I K +H ++ L+ + S AL+++Y++ G+L + +V + +
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V WNS+I+ +A +AL L+++M D TL S + AC L+ LG+
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 177 QAHVHVLKFD-QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
Q H HV++ D D + N+L+DMY K GS++ A +FN++ + V++W++M+ G +QNG
Sbjct: 426 QIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG-WHYFR----SMKNLYGIDPG 290
S+EA+ LFD M N +T L V+ ACS G ++ G W + + +K+L+
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTAL 545
Query: 291 REHYG-C-----------------------MLDLLGRAGKLDDMVKLIHEM---NCKPDV 323
+ Y C M++ G G++ + ++M KP+
Sbjct: 546 IDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNE 605
Query: 324 VTWRTLLDACRAHRNVDLATY 344
V + +L AC +V+ Y
Sbjct: 606 VVFMNVLSACGHSGSVEEGKY 626
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 177/340 (52%), Gaps = 14/340 (4%)
Query: 9 EEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC 68
+ +++VF+ P + + +I L D A+ L ++ E + F F SVLRAC
Sbjct: 51 DSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRAC 110
Query: 69 ----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
E+LS ++H I+K G++ D + ++L+ +Y + G L +A VF M D V W
Sbjct: 111 AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAW 170
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
++++++ ++ + +AL ++K M G D T+ SV+ C + L + R H + +
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
FD D L N+LL MY KCG L ++ IF ++ K+ +SW+ MI+ + FS +AL+
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPGREHYG-CMLD 299
F M G PN +T+ VL +C GL+ +G H F + L DP E +++
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL---DPNYESLSLALVE 347
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNV 339
L GKL D ++ ++ + ++V W +L+ + AHR +
Sbjct: 348 LYAECGKLSDCETVLRVVSDR-NIVAWNSLI-SLYAHRGM 385
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 183/341 (53%), Gaps = 19/341 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + L +A+ VFD MP R++V+W+T++S+ +A+++ M+ +GV P+ T
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SV+ C L + + +H I + + D + ++L+ +YSK G+LL + +F+++
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V W ++I+++ + ++AL + +M ++G + TL SVL +C + L+ G+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 178 AHVHVLKFDQDL---ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++ + D L AL+++Y +CG L D + + + +++++W+++I+ A G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG----IDPG 290
++AL LF M +P+ T+ + AC +AGLV G K ++G D
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG-------KQIHGHVIRTDVS 437
Query: 291 REHY-GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
E ++D+ ++G +D + +++ + VVTW ++L
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSML 477
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEM 116
M + + R+C L + Q+H+ +L G L D + LI+ Y+ +G + VF+
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM-SLLELG 175
D ++ +I D A+ LY ++ + SVLRAC G L +G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H ++K D D ++ +LL MY + G+L DA+ +F+ M V+D+++WST+++ +N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG------I 287
G ++AL++F M G P+ +T++ V+ C+ G + R ++++G
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL-------RIARSVHGQITRKMF 233
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAK 347
D +L + + G L ++ ++ K + V+W ++ + + A +
Sbjct: 234 DLDETLCNSLLTMYSKCGDLLSSERIFEKI-AKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 348 EILKLDAE 355
E++K E
Sbjct: 293 EMIKSGIE 300
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 248/460 (53%), Gaps = 41/460 (8%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSV-KLNDRAMKLLVF--MLREGVMPNMFTFSSV 64
L A VF P N TMI A S + + N ++ + V+ + P+ FTF V
Sbjct: 63 LRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFV 122
Query: 65 LRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
L+ +SD+ +QIH ++ G +S V V + LI +Y G L +A +F EM+ D
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 122 VVWNS---------------------------------IIAAFAQHSDGDEALYLYKKMR 148
VWN+ +I+ +A+ EA+ ++++M
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQ--AHVHVLKFDQDLILHNALLDMYCKCGSLE 206
D+ TL +VL AC + LELG + ++V ++ + L+NA++DMY K G++
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
A +F + ++V++W+T+IAGLA +G EAL +F+ M G RPN +T + +L ACS
Sbjct: 303 KALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
H G VD G F SM++ YGI P EHYGCM+DLLGRAGKL + ++I M K + W
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIW 422
Query: 327 RTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVK 386
+LL A H +++L A E++KL+ ++G Y+LL+N Y+N W++ +R M+
Sbjct: 423 GSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
Query: 387 GIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQF 426
G++K G S IEV+ +++ FI GD +HPQ++ I L +
Sbjct: 483 GVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 40/304 (13%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
L +KQ H ++ GL D + I+ S G L A SVF + + N++I A
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 131 FAQHSDGDE---ALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ 187
+ + + A+ +Y+K+ D T VL+ +S + GRQ H V+ F
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 188 DLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDV------------------------- 220
D +H L+ MY CG L DA+ +F+ M+VKDV
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 221 --------ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
+SW+ +I+G A++G + EA+++F M + P+ +T+L VL AC+ G ++
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G S + G++ ++D+ ++G + + + +N + +VVTW T++
Sbjct: 268 LG-ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAG 325
Query: 333 CRAH 336
H
Sbjct: 326 LATH 329
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +A VF+ + ERNVV+WTT+I+ ++ A+ + M++ GV PN T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 61 FSSVLRACEYLSDI---KQIHSSIL-KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F ++L AC ++ + K++ +S+ K G+ ++ +ID+ + G+L EA V K M
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Query: 117 -VTGDRVVWNSIIAAFAQHSD---GDEAL 141
+ +W S++AA H D G+ AL
Sbjct: 414 PFKANAAIWGSLLAASNVHHDLELGERAL 442
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 250/467 (53%), Gaps = 43/467 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMF 59
MY +E VFDEMP+R+VVSW +IS+Y + A+ + M +E + +
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 60 TFSSVLRACEYLSDIKQIHSSILK---VGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T S L AC L ++ +I I + E V + +AL+D++ K G L +A +VF M
Sbjct: 150 TIVSTLSACSALKNL-EIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 117 ----------------VTG---------------DRVVWNSIIAAFAQHSDGDEALYLYK 145
TG D V+W +++ + Q + DEAL L++
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMYCKCG 203
M+ AG D L S+L C LE G+ H ++ + D ++ AL+DMY KCG
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 204 SLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
+E A +F + +D SW+++I GLA NG S AL L+ M+ +G R + IT + VL
Sbjct: 329 CIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD- 322
AC+H G V +G F SM + + P EH C++DLL RAG LD+ +LI +M + D
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDE 448
Query: 323 --VVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVR 380
V + +LL A R + NV +A A+++ K++ D+ A+ LL++ YA++ W DV VR
Sbjct: 449 TLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVR 508
Query: 381 RTMRVKGIRKEPGCSWIEVDKQIHAFILGDK--SHPQIDEISRQLNQ 425
R M+ GIRK PGCS IE+D H FI+GD SHP++DEI+ L+Q
Sbjct: 509 RKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 174/342 (50%), Gaps = 40/342 (11%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSIL 82
+ M+ + + K + + L + +G+ P+ FT VL++ L + +++H +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
K GLE D +V ++L+ +Y+ LG++ VF EM D V WN +I+++ + ++A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 143 LYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-KFDQDLILHNALLDMYC 200
++K+M + + D+ T+ S L AC+ + LE+G + + V+ +F+ + + NAL+DM+C
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 201 KCGSL-------------------------------EDAKFIFNRMVVKDVISWSTMIAG 229
KCG L ++A+ +F R VKDV+ W+ M+ G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG-WHYFRSMKNLYGID 288
Q EAL+LF M+ G RP+ ++ +L C+ G ++ G W + +N +D
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ ++D+ + G ++ +++ +E+ + D +W +L+
Sbjct: 314 --KVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 260/457 (56%), Gaps = 11/457 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + + ++ VF M ER+VVSW TMISA+ L+D + L+ M ++G + T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE-- 115
+++L A L + KQ H+ +++ G++ + + S LID+YSK G + + +F+
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D+ WNS+I+ + Q+ ++ +++KM + T+ S+L AC+ + ++LG
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+Q H ++ DQ++ + +AL+DMY K G+++ A+ +F++ ++ ++++TMI G Q+
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQH 600
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G A+ LF SM+ G +P+ IT + VL ACS++GL+D+G F M+ +Y I P EH
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVT-WRTLLDACRAHRNVDLATYAAKEILKL 352
Y C+ D+LGR G++++ + + + + ++ W +LL +C+ H ++LA ++ + K
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 353 DAED--TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGD 410
D +G VLLSN YA + W V +VRR MR KG++KE G S IE+ ++ F+ D
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRD 780
Query: 411 KSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLE 447
+ HP EI ++ + G ++ V LE
Sbjct: 781 QEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 177/373 (47%), Gaps = 46/373 (12%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSD 73
VFD M +NVV+W T+IS Y N A + M+R V P+ +F +V A
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 74 IKQ---IHSSILKVGLE--SDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSII 128
IK+ + +LK+G E D+FV S+ I +Y++LG++ + VF V + VWN++I
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 129 AAFAQHSDGDEALYLY-KKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ 187
+ Q+ E++ L+ + + +D+ T A + + +ELGRQ H V K +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 188 DL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
+L ++ N+L+ MY +CGS+ + +F M +DV+SW+TMI+ QNG E L L
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 246 MKVMGPRPNYITILGVLFACS-----------HAGLVDDGWHYFRSMKNLYGID------ 288
M+ G + +YIT+ +L A S HA L+ G F M N Y ID
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGM-NSYLIDMYSKSG 467
Query: 289 ----------------PGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTL 329
+ + M+ + G + + +M N +P+ VT ++
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 330 LDACRAHRNVDLA 342
L AC +VDL
Sbjct: 528 LPACSQIGSVDLG 540
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 176/346 (50%), Gaps = 27/346 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-REGVMPNMF 59
MY + +E ++ VFD ERN+ W TMI Y +++L + + + ++ +
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 60 TF---SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ +S + A + + +Q H + K E + + ++L+ +YS+ G + ++ VF M
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM 379
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN++I+AF Q+ DE L L +M++ GF D T+T++L A + + E+G+
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGK 439
Query: 177 QAHVHVLKFD-QDLILHNALLDMYCKCGSLEDAKFIF--NRMVVKDVISWSTMIAGLAQN 233
Q H +++ Q +++ L+DMY K G + ++ +F + +D +W++MI+G QN
Sbjct: 440 QTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQN 499
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG------I 287
G + + +F M RPN +T+ +L ACS G VD G K L+G +
Sbjct: 500 GHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG-------KQLHGFSIRQYL 552
Query: 288 DPGREHYGCMLDLLGRAGKL---DDMVKLIHEMNCKPDVVTWRTLL 330
D ++D+ +AG + +DM E N VT+ T++
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS----VTYTTMI 594
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 34/247 (13%)
Query: 109 ALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR-AGFP-ADQSTLTSVLRAC 166
A +F + V+WN+II F ++ EAL Y +M++ A F D T +S L+AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 167 TGMSLLELGRQAHVHVLKFDQD--LILHNALLDMYCKCGSLED------AKFIFNRMVVK 218
L+ G+ H H+++ Q+ ++HN+L++MY C + D + +F+ M K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
+V++W+T+I+ + G + EA + F M M +P+ ++ + V A S +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS---------- 227
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGK----LDDMVKLIHEMNCKPDVVTWRTLLDACR 334
RS+K YG ML L K + + + E+ D+ + R + D+C
Sbjct: 228 RSIKK------ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG---DIESSRRVFDSC- 277
Query: 335 AHRNVDL 341
RN+++
Sbjct: 278 VERNIEV 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 153/346 (44%), Gaps = 34/346 (9%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN--MFTFSSVLRAC 68
A+ +FD +P+ V W T+I + L A+ M + N +T+SS L+AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 69 EYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALS------VFKEMVTG 119
++ K +H +++ S V ++L+++Y + VF M
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ V WN++I+ + + EA + M R + +V A + ++ +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 180 VHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
+LK + +DL + ++ + MY + G +E ++ +F+ V +++ W+TMI QN
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 236 SLEALKLFDSMKVMGPR---PNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPG 290
+E+++LF ++ +G + + +T L A S V+ G +H F S KN
Sbjct: 298 LVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS-KNF------ 348
Query: 291 REH----YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
RE ++ + R G + + M + DVV+W T++ A
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISA 393
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 224/425 (52%), Gaps = 38/425 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + EA+ VF M ++ VSW ++I+ K A +L MP
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF------EKMPG--- 369
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
D+ + +I +S GE+ + + +F M D
Sbjct: 370 ---------------------------KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKD 402
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
+ W ++I+AF + +EAL + KM + + T +SVL A ++ L G Q H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 181 HVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
V+K + DL + N+L+ MYCKCG+ DA IF+ + +++S++TMI+G + NGF +
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKK 522
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
ALKLF ++ G PN +T L +L AC H G VD GW YF+SMK+ Y I+PG +HY CM+
Sbjct: 523 ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMV 582
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG 358
DLLGR+G LDD LI M CKP W +LL A + H VDLA AAK++++L+ +
Sbjct: 583 DLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSAT 642
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
YV+LS Y+ D + + K I+K+PG SWI + ++H F+ GD+S ++E
Sbjct: 643 PYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEE 702
Query: 419 ISRQL 423
I L
Sbjct: 703 IGFTL 707
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 159/336 (47%), Gaps = 28/336 (8%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLV---FMLREGVMPNMFTFSSV 64
L +A +F ++PE+N VS+ TMI+ + D A L R+ V N+ S
Sbjct: 129 LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVL-LSGY 187
Query: 65 LRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
LRA ++ ++ +K +V S+++ Y K+G +++A S+F M + + W
Sbjct: 188 LRAGKWNEAVRVFQGMAVK-----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGRQAH--VH 181
++I + + ++ L+ +MR+ G + +TL + +AC G Q H V
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
+ + DL L N+L+ MY K G + +AK +F M KD +SW+++I GL Q EA +
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYE 362
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH--YGCMLD 299
LF+ M P + ++ ++ S G + L+G+ P +++ + M+
Sbjct: 363 LFEKM----PGKDMVSWTDMIKGFSGKGEISK-------CVELFGMMPEKDNITWTAMIS 411
Query: 300 LLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDA 332
G ++ + H+M K P+ T+ ++L A
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L+EA+ +F +M R++VSW MISAY+ +A ++ MP T S
Sbjct: 66 LQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF------DEMPVRVTTS----- 114
Query: 68 CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+++++ +A+I LG+ E +F ++ + V + ++
Sbjct: 115 ----------YNAMI-----------TAMIKNKCDLGKAYE---LFCDIPEKNAVSYATM 150
Query: 128 IAAFAQHSDGDEALYLYKK--MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF 185
I F + DEA +LY + ++ A L+ LRA + + + V
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV----- 205
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
++++ ++++ YCK G + DA+ +F+RM ++VI+W+ MI G + GF + LF
Sbjct: 206 -KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLR 264
Query: 246 MKVMGPRPNYITILGVLF-AC 265
M+ G L V+F AC
Sbjct: 265 MRQEGDVKVNSNTLAVMFKAC 285
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 90 VFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR 149
+F ++ I +++ G L EA ++F++M V W ++I+A+A++ +A ++ +M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 150 AGFPADQSTLTSVLR-----------------------ACTGMSLLELGRQAHVHVL--- 183
+ + +T++++ A + GR L
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 184 ---KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
KF +D + N LL Y + G +A +F M VK+V+S S+M+ G + G ++A
Sbjct: 170 TPVKF-RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK 282
LFD M N IT ++ AG +DG+ F M+
Sbjct: 229 SLFDRM----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 230/406 (56%), Gaps = 7/406 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY F A VF+ + E+++V+W TMIS+Y+ KL AM + M GV P+ FT
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
F S+L L ++ + + I+K GL S + + +ALI YSK G++ +A +F+ + +
Sbjct: 392 FGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAG--FPADQSTLTSVLRACTGMSLLELGRQA 178
+ WN+II+ F + E L + + + D TL+++L C S L LG Q
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 179 HVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +VL+ Q + ++ NAL++MY +CG+++++ +FN+M KDV+SW+++I+ +++G
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 237 LEALKLFDSMKVMGPR-PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A+ + +M+ G P+ T VL ACSHAGLV++G F SM +G+ +H+
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 296 CMLDLLGRAGKLDDMVKL--IHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
C++DLLGRAG LD+ L I E V W L AC AH ++ L AK +++ +
Sbjct: 632 CLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKE 691
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
+D YV LSN YA + MW + E RR + + G K+ GCSW+ +
Sbjct: 692 KDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 20/346 (5%)
Query: 1 MYVKFNLLEEAQVVFDE--MPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMP 56
MY ++ +A +VF+E + R+ V++ +I + K R LLVF ML + P
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFK---RDESLLVFRKMLEASLRP 289
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF SV+ +C + Q+H +K G E V +A + +YS + A VF+ +
Sbjct: 290 TDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL 349
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN++I+++ Q G A+ +YK+M G D+ T S+L + +LE+
Sbjct: 350 EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM-V 408
Query: 177 QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
QA + + + NAL+ Y K G +E A +F R + K++ISW+ +I+G NGF
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFP 468
Query: 237 LEALKLFDSMKVMGPR--PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
E L+ F + R P+ T+ +L C V S + Y + G+
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRHGQFKE 523
Query: 295 ----GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++++ + G + + +++ ++M+ K DVV+W +L+ A H
Sbjct: 524 TLIGNALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRH 568
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 167/372 (44%), Gaps = 51/372 (13%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF------------ 48
+Y + L + FDE+ E +V SWTT++SA S KL D VF
Sbjct: 101 LYERLGNLASLKKKFDEIDEPDVYSWTTLLSA--SFKLGDIEYAFEVFDKMPERDDVAIW 158
Query: 49 ------------------MLRE----GVMPNMFTFSSVLRACEY--LSDIKQIHSSILKV 84
+ RE GV + F F+++L C+Y L KQ+HS ++K
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKA 218
Query: 85 GLESDVFVRSALIDVYSKLGELLEALSVFKE--MVTGDRVVWNSIIAAFAQHSDGDEALY 142
G V +ALI +Y +++A VF+E + D+V +N +I A DE+L
Sbjct: 219 GFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLL 277
Query: 143 LYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYC 200
+++KM A T SV+ +C S +G Q H +K +++ ++ NA + MY
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 201 KCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILG 260
A +F + KD+++W+TMI+ Q A+ ++ M ++G +P+ T G
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT-FG 393
Query: 261 VLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK 320
L A S L D ++ +G+ E ++ + G+++ L+ E + +
Sbjct: 394 SLLATS---LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK-ADLLFERSLR 449
Query: 321 PDVVTWRTLLDA 332
++++W ++
Sbjct: 450 KNLISWNAIISG 461
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 254/461 (55%), Gaps = 33/461 (7%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV------- 54
Y + +++A +FDEMPERN+VSW +M+ A D AM L M R V
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV 209
Query: 55 ------------------MP--NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRS 94
MP N+ ++++++ + I + + +V E D +
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA-DQLFQVMPERDFASWN 268
Query: 95 ALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FP 153
+I + + E+ +A +F M + + W ++I + ++ + +EAL ++ KM R G
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 154 ADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFI 211
+ T S+L AC+ ++ L G+Q H + K ++ I+ +ALL+MY K G L A+ +
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 212 FNRMVV--KDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
F+ +V +D+ISW++MIA A +G EA+++++ M+ G +P+ +T L +LFACSHAG
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 270 LVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTL 329
LV+ G +F+ + + EHY C++DL GRAG+L D+ I+ + + + +
Sbjct: 449 LVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAI 508
Query: 330 LDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
L AC H V +A K++L+ ++D G YVL+SN YA + + AE+R M+ KG++
Sbjct: 509 LSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
Query: 390 KEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRL 430
K+PGCSW++V KQ H F++GDKSHPQ + + L+ +++
Sbjct: 569 KQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKM 609
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 48/338 (14%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ L A+++F EMPERNVVSW TMI Y+ D+A++L M N+ ++
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSW 174
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
+S+++A I + ++ + DV +A++D +K G++ EA +F M +
Sbjct: 175 NSMVKALVQRGRIDEAM-NLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
+ WN++I +AQ++ DEA L++ M F + + +T +R
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN---------------- 277
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
+M CG +F+RM K+VISW+TMI G +N + EAL
Sbjct: 278 --------------REMNKACG-------LFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 242 LFDSMKVMGP-RPNYITILGVLFACSH-AGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
+F M G +PN T + +L ACS AGLV+ + K+++ +L+
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH--QKNEIVTSALLN 374
Query: 300 LLGRAGKLDDMVKLI-HEMNCKPDVVTWRTLLDACRAH 336
+ ++G+L K+ + + C+ D+++W +++ A AH
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMI-AVYAH 411
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 86/329 (26%)
Query: 4 KFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
K + EA+ +FD +PER+VV+WT +I+ Y +KL D
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGY--IKLGD----------------------- 92
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
+R L D +V +V +A++ Y + +L A +F+EM + V
Sbjct: 93 -MREARELFD---------RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
WN++I +AQ D+AL L+ +M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMP----------------------------------- 167
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
+++++ N+++ + G +++A +F RM +DV+SW+ M+ GLA+NG EA +LF
Sbjct: 168 --ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE--HYGCMLDLL 301
D M P N I+ ++ + +D+ F+ M P R+ + M+
Sbjct: 226 DCM----PERNIISWNAMITGYAQNNRIDEADQLFQVM-------PERDFASWNTMITGF 274
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
R +++ L M K +V++W T++
Sbjct: 275 IRNREMNKACGLFDRMPEK-NVISWTTMI 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 63/310 (20%)
Query: 38 LNDRAM-KLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSAL 96
+ RA+ +L + R V P+ S R+ + + ++ I+SS + + + L
Sbjct: 1 MQSRALSRLRSYYKRSSVFPS----SDNDRSVQLFNLVRSIYSSSSRPRVPQPEW----L 52
Query: 97 IDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQ 156
I K+G++ EA +F + D V W +I + + D EA L+ +
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR---------- 102
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV 216
+ ++++ A++ Y + L A+ +F M
Sbjct: 103 --------------------------VDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP 136
Query: 217 VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH 276
++V+SW+TMI G AQ+G +AL+LFD M P N ++ ++ A G +D+ +
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 277 YFRSMKNLYGIDPGRE--HYGCMLDLLGRAGKLDDMVKLIHEMNCKPD--VVTWRTLLDA 332
F M P R+ + M+D L + GK+D+ +L +C P+ +++W ++
Sbjct: 193 LFERM-------PRRDVVSWTAMVDGLAKNGKVDEARRLF---DCMPERNIISWNAMITG 242
Query: 333 CRAHRNVDLA 342
+ +D A
Sbjct: 243 YAQNNRIDEA 252
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 238/466 (51%), Gaps = 44/466 (9%)
Query: 16 DEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC------- 68
++ VSWT+ I+ + A K M GV PN TF ++L C
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 69 EYLSDIKQIHSSILKVGLESD-VFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
E L D+ +H K+GL+ + V V +A+I +YSK G +A VF M + V WN++
Sbjct: 89 EALGDL--LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 128 IAAFAQHSDGD-------------------------------EALYLYKKMRRAGFPADQ 156
I + + D EAL +++M+ +G D
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNR 214
+ + L ACT + L G H +VL F ++ + N+L+D+YC+CG +E A+ +F
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 215 MVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
M + V+SW+++I G A NG + E+L F M+ G +P+ +T G L ACSH GLV++G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACR 334
YF+ MK Y I P EHYGC++DL RAG+L+D +KL+ M KP+ V +LL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 335 AH-RNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPG 393
H N+ LA K + L+ + YV+LSN YA W +++RR M+ G++K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 394 CSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDT 439
S IE+D +H F+ GD +H + I L S L G V +T
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 42/275 (15%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ ++ A +FD+MPER+++SWT MI+ + + A+ M GV P+
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ L AC L + +H +L +++V V ++LID+Y + G + A VF M
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V WNS+I FA + + E+L ++KM+ GF D T T L AC+ + L+E G +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR- 328
Query: 179 HVHVLKFDQDL---ILH-NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ ++K D + I H L+D+Y + G LED
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLED--------------------------- 361
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
ALKL SM + +PN + I +L ACS+ G
Sbjct: 362 ----ALKLVQSMPM---KPNEVVIGSLLAACSNHG 389
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF---MLREGVMPN 57
+Y + +E A+ VF M +R VVSW ++I +++ N A + LV+ M +G P+
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAA---NGNAHESLVYFRKMQEKGFKPD 306
Query: 58 MFTFSSVLRACEYLSDIKQ--IHSSILKVGLESDVFVR--SALIDVYSKLGELLEALSVF 113
TF+ L AC ++ +++ + I+K + L+D+YS+ G L +AL +
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 114 KEM-VTGDRVVWNSIIAAFAQHSD 136
+ M + + VV S++AA + H +
Sbjct: 367 QSMPMKPNEVVIGSLLAACSNHGN 390
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 244/431 (56%), Gaps = 19/431 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNMF 59
Y K +EA +F + E++V+SW+T+I+ Y V+ A LLVF M+ +G PN+
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACY--VQNGAAAEALLVFNDMMDDGTEPNVA 265
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T VL+AC D++Q H ++ GLE++V V +AL+D+Y K EA +VF +
Sbjct: 266 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI 325
Query: 117 VTGDRVVWNSIIAAF-----AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSL 171
D V W ++I+ F A S + ++ L + R D + VL +C+ +
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP----DAILMVKVLGSCSELGF 381
Query: 172 LELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
LE + H +V+K FD + + +L+++Y +CGSL +A +FN + +KD + W+++I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 230 LAQNGFSLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID 288
+G +AL+ F+ M K +PN +T L +L ACSHAGL+ +G F+ M N Y +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
P EHY ++DLLGR G LD +++ M P TLL ACR H+N ++A AK+
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 349 ILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFIL 408
+ +L++ G Y+L+SN Y W +V ++R +++ +GI+K S IE+ +++H F+
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Query: 409 GDKSHPQIDEI 419
D+ HP+ + +
Sbjct: 622 DDELHPEKEPV 632
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 188/351 (53%), Gaps = 19/351 (5%)
Query: 4 KFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
KF+ +A+ +F EM +R++ W T++ + S K + + M R+ P+ FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 64 VLRACEYLSDI---KQIHSSILK-VGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
L+AC L ++ + IH + K V L SD++V S+LI +Y K G ++EAL +F E+
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGRQA 178
D V W+S+++ F ++ +A+ +++M A D+ TL +++ ACT +S LGR
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H V++ F DL L N+LL+ Y K + ++A +F + KDVISWST+IA QNG +
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY---GIDPGREH 293
EAL +F+ M G PN T+L VL AC+ A ++ G R L G++ +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG----RKTHELAIRKGLETEVKV 301
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACR----AHRNVD 340
++D+ + ++ + + + DVV+W L+ AHR+++
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 351
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 183/343 (53%), Gaps = 9/343 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM-LREGVMPNMF 59
MY+K + EA +FDE+ + ++V+W++M+S + +A++ M + V P+
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T +++ AC LS+ + +H +++ G +D+ + ++L++ Y+K EA+++FK +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + W+++IA + Q+ EAL ++ M G + +T+ VL+AC LE GR
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
+ H ++ + ++ + AL+DMY KC S E+A +F+R+ KDV+SW +I+G NG
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 235 FSLEALKLFDSMKVM-GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
+ +++ F M + RP+ I ++ VL +CS G ++ F S YG D
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFI 403
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+++L R G L + K+ + + K D V W +L+ H
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIH 445
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 38/300 (12%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMF 59
MY+K EEA VF +P ++VVSW +IS ++ + R+++ ML E P+
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 60 TFSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
VL +C +L K HS ++K G +S+ F+ ++L+++YS+ G L A VF +
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELG 175
D VVW S+I + H G +AL + M + + ++ T S+L AC+ L+ G
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 176 RQAH---VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG--- 229
+ V+ + +L + L+D+ + G L+ A I RM + G
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547
Query: 230 LAQNGFSLE--ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
+ QNG E A KLF+ +HAG Y+ M N+YG+
Sbjct: 548 IHQNGEMAETVAKKLFE------------------LESNHAG-------YYMLMSNVYGV 582
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 247/459 (53%), Gaps = 45/459 (9%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIK---QIHSSIL 82
W +I +S+ + ++++ + + MLR G++P+ T+ ++++ LS+ K +H S++
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 83 KVGLESDVFVRSALI-------------------------------DVYSKLGELLEALS 111
K GLE D+F+ + LI D Y+K G+++ A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 112 VFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMS 170
VF EM D V W+S+I + + + ++AL ++ +M R G A++ T+ SV+ AC +
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 171 LLELGRQAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVK--DVISWSTM 226
L G+ H ++L L IL +L+DMY KCGS+ DA +F R VK D + W+ +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I GLA +GF E+L+LF M+ P+ IT L +L ACSH GLV + WH+F+S+K G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE-SG 374
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAA 346
+P EHY CM+D+L RAG + D I EM KP LL+ C H N++LA
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 347 KEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAF 406
K++++L + G YV L+N YA +K + +R M KG++K G S +++D H F
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRF 494
Query: 407 ILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQD 445
I DK+H D+I L +LTGA D ++ QD
Sbjct: 495 IAHDKTHFHSDKIYAVL-----QLTGAWMNLDVDYDDQD 528
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 100/178 (56%), Gaps = 6/178 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFT 60
Y K + A++VFDEM ER+VV+W++MI Y ++A+++ M+R G N T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF--KE 115
SV+ AC +L + K +H IL V L V ++++LID+Y+K G + +A SVF
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ D ++WN+II A H E+L L+ KMR + D+ T +L AC+ L++
Sbjct: 304 VKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 39/312 (12%)
Query: 63 SVLR-ACEYLSDIKQIHSSILKVGL-ESDVFVRSAL-IDVYSKLGELLEALSVFKEMVTG 119
S+LR C+ +S++ +IH+ ++ +GL E + FV L S G++ A ++
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
WN +I F+ + ++++ +Y +M R G D T ++++ + +S +LG H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 180 VHVLK--FDQDLILHNAL-------------------------------LDMYCKCGSLE 206
V+K + DL + N L LD Y K G +
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG-PRPNYITILGVLFAC 265
A+ +F+ M +DV++WS+MI G + G +AL++FD M MG + N +T++ V+ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 266 SHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK-PDVV 324
+H G ++ G R + +++ + ++D+ + G + D + + + K D +
Sbjct: 252 AHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 325 TWRTLLDACRAH 336
W ++ +H
Sbjct: 311 MWNAIIGGLASH 322
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 222/400 (55%), Gaps = 14/400 (3%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSD 73
VF+++P+ NVV+W ++IS + + A++ M GV N +L AC D
Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKD 223
Query: 74 I---KQIHSSILKVGLES--------DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
I K H + +G + +V + ++LID+Y+K G+L A +F M V
Sbjct: 224 IVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WNSII ++Q+ D +EAL ++ M G D+ T SV+RA +LG+ H +V
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 183 LK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
K F +D + AL++MY K G E AK F + KD I+W+ +I GLA +G EAL
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 403
Query: 241 KLFDSMKVMG-PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
+F M+ G P+ IT LGVL+ACSH GLV++G YF M++L+G++P EHYGCM+D
Sbjct: 404 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
+L RAG+ ++ +L+ M KP+V W LL+ C H N++L + + + +G
Sbjct: 464 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGI 523
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
YVLLSN YA + W DV +R +M+ K + K G S +E
Sbjct: 524 YVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 25/347 (7%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L A+ VF+ + +V W +MI YS+ D+A+ MLR+G P+ FTF VL+A
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 68 CEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
C L DI+ +H ++K G E +++V + L+ +Y GE+ L VF+++ + V W
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHV 182
S+I+ F ++ +A+ +++M+ G A+++ + +L AC + G+ H +
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 183 LKFDQ--------DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
L FD ++IL +L+DMY KCG L A+++F+ M + ++SW+++I G +QNG
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFA-----CSHAGLVDDGWHYFRSMKNLYGIDP 289
+ EAL +F M +G P+ +T L V+ A CS G H + S G
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG---QSIHAYVSKT---GFVK 350
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++++ + G + K ++ K D + W ++ +H
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASH 396
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 16/263 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L A+ +FD MPER +VSW ++I+ YS + A+ + + ML G+ P+ T
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 61 FSSVLRA-----CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
F SV+RA C L + IH+ + K G D + AL+++Y+K G+ A F++
Sbjct: 320 FLSVIRASMIQGCSQLG--QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLEL 174
+ D + W +I A H G+EAL ++++M+ G D T VL AC+ + L+E
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 175 GRQ--AHVHVLKFDQDLILH-NALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGL 230
G++ A + L + + H ++D+ + G E+A+ + M VK +V W ++ G
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Query: 231 AQNGFSLEALKLFDSMKVMGPRP 253
+ E L+L D ++ M P
Sbjct: 498 DIH----ENLELTDRIRSMVAEP 516
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLE---ALSVFKEMVTG 119
S L C L ++ Q+H ++K + +V S LID + E + A SVF+ +
Sbjct: 11 SQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCP 70
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+WNS+I ++ + D+AL Y++M R G+ D T VL+AC+G+ ++ G H
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 180 VHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
V+K F+ ++ + LL MY CG + +F + +V++W ++I+G N
Sbjct: 131 GFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFS 190
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+A++ F M+ G + N ++ +L AC + G +F G DP
Sbjct: 191 DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDP 241
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 227/396 (57%), Gaps = 7/396 (1%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+E + +F +P+ +V +W M+S YS+ + + A+ M + + P+ T S +L +
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 68 C---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG-DRVV 123
C +L KQIH +++ + + + S LI VYS+ ++ + +F + + D
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRR-AGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WNS+I+ F + +AL L+++M + A ++++ +VL +C+ + L GRQ H V
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 183 LK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+K + D + AL DMYCKCG ++ A+ F+ ++ K+ + W+ MI G NG EA+
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
L+ M G +P+ IT + VL ACSH+GLV+ G SM+ ++GI+P +HY C++D
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDC 665
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY 360
LGRAG+L+D KL K V W LL +CR H +V LA A+++++LD + + AY
Sbjct: 666 LGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAY 725
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSW 396
VLLSNTY++ + W+D A ++ M + K PG SW
Sbjct: 726 VLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 23/348 (6%)
Query: 4 KFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
K L EA VFD MPER+VVSW MIS ++A+ + M+ +G +P+ FT +S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 64 VLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLE-ALSVFKEMVTG 119
VL AC + D + H +K GL+ ++FV +AL+ +Y+K G +++ + VF+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL------RACTGMSLL- 172
+ V + ++I A+ + EA+ +++ M G D L+++L C +S +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 173 --ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIA 228
ELG+Q H L+ F DL L+N+LL++Y K + A+ IF M +V+SW+ MI
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 229 GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID 288
G Q S ++++ M+ G +PN +T + VL AC +G V+ G F S+
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----- 378
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDAC 333
P + ML ++ + +M N KPD T +L +C
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 75/373 (20%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + A+++F EMPE NVVSW MI + +D++++ L M G PN T
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SVL AC D+ ++I SSI + + +
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPSVSA----------------------------- 383
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
WN++++ ++ + +EA+ +++M+ D++TL+ +L +C + LE G+Q
Sbjct: 384 ------WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 178 AHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQNG 234
H V++ + H + L+ +Y +C +E ++ IF+ + + D+ W++MI+G N
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNM 497
Query: 235 FSLEALKLFDSMKVMGPR-PNYITILGVLFACS-----------HAGLVDDGW----HYF 278
+AL LF M PN + VL +CS H +V G+
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE 557
Query: 279 RSMKNLYG----IDPGREHYGC-----------MLDLLGRAGKLDDMVKLIHEM---NCK 320
++ ++Y ID R+ + M+ G G+ D+ V L +M K
Sbjct: 558 TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK 617
Query: 321 PDVVTWRTLLDAC 333
PD +T+ ++L AC
Sbjct: 618 PDGITFVSVLTAC 630
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 42/267 (15%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVY-------------------------------SKL 103
K IH I+++G++SD ++ + L+D+Y K+
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 104 GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
G+L EA VF M D V WN++I+ + ++AL +YK+M GF + TL SVL
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 164 RACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKF-IFNRMVVKDV 220
AC+ + G + H +K D+++ + NALL MY KCG + D +F + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 205
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS 280
+S++ +I GLA+ LEA+++F M G + + + + +L + D S
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD-------S 258
Query: 281 MKNLYGIDPGREHYGCMLDLLGRAGKL 307
+ +YG + G++ + C+ LG G L
Sbjct: 259 LSEIYGNELGKQIH-CLALRLGFGGDL 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 187 QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
+D+ NA L CK G L +A +F+ M +DV+SW+ MI+ L + GF +AL ++ M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWHYFR--SMKNLYGIDPGREHYGCMLDLLGRA 304
G P+ T+ VL ACS V DG R + G+D +L + +
Sbjct: 130 VCDGFLPSRFTLASVLSACSK---VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 305 GKLDDMVKLIHEMNCKPDVVTWRTLL 330
G + D + E +P+ V++ ++
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVI 212
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ A+ FD + +N V W MI Y D A+ L M+ G P+ T
Sbjct: 563 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 622
Query: 61 FSSVLRAC----------EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
F SVL AC E LS +++IH G+E ++ ++D + G L +A
Sbjct: 623 FVSVLTACSHSGLVETGLEILSSMQRIH------GIEPELDHYICIVDCLGRAGRLEDAE 676
Query: 111 SVFKEM-VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
+ + V+W ++++ H D A + +K+ R QS+ VL + T
Sbjct: 677 KLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD---PQSSAAYVLLSNTYS 733
Query: 170 SL 171
SL
Sbjct: 734 SL 735
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 242/471 (51%), Gaps = 42/471 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y++ A+ VF MP +V S+ MI Y+ + A+KL M+ +G+ P+ +T
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 62 SSVLRACEYLSDI---KQIHSSILKVG--LESDVFVRSALIDVYSK-------------- 102
S+L C +LSDI K +H I + G S++ + +AL+D+Y K
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAM 295
Query: 103 -----------------LGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL--YL 143
LG++ A +VF +M D V WNS++ +++ +
Sbjct: 296 KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF 355
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV--LKFDQDLILHNALLDMYCK 201
Y+ D+ T+ S++ L GR H V L+ D L +AL+DMYCK
Sbjct: 356 YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCK 415
Query: 202 CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
CG +E A +F KDV W++MI GLA +G +AL+LF M+ G PN +T+L V
Sbjct: 416 CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIH-EMNCK 320
L ACSH+GLV++G H F MK+ +G DP EHYG ++DLL RAG++++ ++ +M +
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 321 PDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVR 380
P W ++L ACR +++ A A E+LKL+ E G YVLLSN YA W + R
Sbjct: 536 PSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTR 595
Query: 381 RTMRVKGIRKEPGCSWIEVDKQIHAFILGDK-SHPQIDEISRQLNQFISRL 430
M +G++K G S + + +H F+ +K +HP+ EI R L + +
Sbjct: 596 EAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEM 646
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 8 LEEAQVVF-DEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
L+ A+++F + P NV + TMISA SS K + L M+R V P+ TF +++
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 67 ACEYLSDIKQIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
A +LS++KQIH I+ G L ++ ++L+ Y +LG A VF M D +N
Sbjct: 142 ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK- 184
+I +A+ EAL LY KM G D+ T+ S+L C +S + LG+ H + +
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 185 ---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
+ +LIL NALLDMY KC AK F+ M KD+ SW+TM+ G + G A
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAG 269
+FD M P+ + ++ +LF S G
Sbjct: 322 VFDQM----PKRDLVSWNSLLFGYSKKG 345
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALI--DVYSKLGELLEALSVFKEMVTGDR 121
+L C + KQ+ + I++ L D F S LI + L A +F
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 122 V-VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V V+N++I+A + S +E LY M R D+ T +++A + +S + +Q H
Sbjct: 100 VFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHC 154
Query: 181 HVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
H++ L N+L+ Y + G+ A+ +F RM DV S++ MI G A+ GFSL
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSH 267
EALKL+ M G P+ T+L +L C H
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++E A +VF E++V WT+MI+ + +A++L M EGV PN T
Sbjct: 412 MYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVT 471
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+VL AC + +++ + K G + + +L+D+ + G + EA + ++
Sbjct: 472 LLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKK 531
Query: 117 VT--GDRVVWNSIIAAFAQHSDGDEA 140
+ + +W SI++A D + A
Sbjct: 532 MPMRPSQSMWGSILSACRGGEDIETA 557
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 221/408 (54%), Gaps = 9/408 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K ++EA+ VFD M R+V++WT MI+ Y+ + A++L M EGV PN T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+S++ C ++D K +H ++ + SD+ + ++LI +Y+K + VF
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
W++IIA Q+ +AL L+K+MRR + +TL S+L A ++ L
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFN----RMVVKDVISWSTMIAGLA 231
H ++ K F L L+ +Y KCG+LE A IFN + KDV+ W +I+G
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
+G AL++F M G PN IT L ACSH+GLV++G FR M Y
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
HY C++DLLGRAG+LD+ LI + +P W LL AC H NV L AA ++ +
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
L+ E+TG YVLL+N YA W D+ +VR M G+RK+PG S IE+
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 153/271 (56%), Gaps = 7/271 (2%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV--MPNMFTFSSVLRAC 68
A+ +F+EMP+ +++S+ +I Y L A+ + + M+ EGV +P+ +T+ V +A
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 69 EYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
L +K +H IL+ D +V++AL+ +Y G++ A VF M D + WN
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVL 183
++I+ + ++ ++AL ++ M D +T+ S+L C + LE+GR H V
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
+ + + NAL++MY KCG +++A+F+F+RM +DVI+W+ MI G ++G AL+L
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
M+ G RPN +TI ++ C A V+DG
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 21/350 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+ F +E A+ VFD M R+V+SW TMIS Y + A+ + +M+ E V + T
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+L C +L D+ + +H + + L + V++AL+++Y K G + EA VF M
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D + W +I + + D + AL L + M+ G + T+ S++ C + G+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++ D+I+ +L+ MY KC ++ +F+ WS +IAG QN
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY------GIDP 289
+AL LF M+ PN T+ +L A +A L D R N++ G
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPA--YAALAD-----LRQAMNIHCYLTKTGFMS 453
Query: 290 GREHYGCMLDLLGRAGKLDDMVKL---IHEMNCKPDVVTWRTLLDACRAH 336
+ ++ + + G L+ K+ I E + DVV W L+ H
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 252/497 (50%), Gaps = 79/497 (15%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR--EGVMPNMF 59
Y ++ + EA +F EMPERN+VSWT MIS ++ +L A+ L + M + + V PN
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 60 TFSSVLRAC-----EYLSDIKQIHSSILKVGLE-----------------SDVFVRSA-- 95
T S+ AC E+ +Q+H+ ++ G E S + SA
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 96 -------------LIDVYSKLGELLEALSVFKEMVT-GDRVVWNSIIAAFAQHSDGDEAL 141
+I+ Y K G+L A ++F+ + + D+V W S+I + + D A
Sbjct: 361 LLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAF 420
Query: 142 YLYKK-------------------------------MRRAGFPADQSTLTSVLRACTGMS 170
L++K M R G ST + +L + S
Sbjct: 421 GLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 171 LLELGRQAHVHVLK----FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTM 226
L+ G+ H + K +D DLIL N+L+ MY KCG++EDA IF +MV KD +SW++M
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I GL+ +G + +AL LF M G +PN +T LGVL ACSH+GL+ G F++MK Y
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYS 600
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH-RNVD---LA 342
I PG +HY M+DLLGRAGKL + + I + PD + LL C + R+ D +A
Sbjct: 601 IQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIA 660
Query: 343 TYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQ 402
AA +L+LD + +V L N YA + E+R+ M +KG++K PGCSW+ V+ +
Sbjct: 661 ERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGR 720
Query: 403 IHAFILGDKSHPQIDEI 419
+ F+ GDKS + ++
Sbjct: 721 ANVFLSGDKSASEAAQM 737
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 64/293 (21%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMFT 60
Y K L+EA+V+F+ MPERN+V+ M++ Y + + A L RE MP N+ +
Sbjct: 87 YAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF----RE--MPKNVVS 140
Query: 61 FSSVLRACEYLSDIKQIHSSI--LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
++ +L A L D + ++ E +V + L+ + G++ +A VF M +
Sbjct: 141 WTVMLTA---LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS 197
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V WN++I + ++ +EA L+ M
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLLFGDMS------------------------------ 227
Query: 179 HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
+++++ +++ YC+ G + +A +F M ++++SW+ MI+G A N E
Sbjct: 228 -------EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 239 ALKLFDSMK--VMGPRPNYITILGVLFACS-------------HAGLVDDGWH 276
AL LF MK V PN T++ + +AC HA ++ +GW
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +E+A +F +M +++ VSW +MI S L D+A+ L ML G PN T
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRS------------ALIDVYSKLGELLE 108
F VL AC HS ++ GLE ++ ++ID+ + G+L E
Sbjct: 572 FLGVLSACS--------HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 109 ALSVFKEM-VTGDRVVWNSIIA 129
A + T D V+ +++
Sbjct: 624 AEEFISALPFTPDHTVYGALLG 645
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 120 DRVV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+RVV W S+++ +A+ DEA L++ M + LT ++ C M+ +A
Sbjct: 75 NRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK-CRRMN------EA 127
Query: 179 HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
+ ++++ +L C G EDA +F+ M ++V+SW+T++ GL +NG +
Sbjct: 128 WTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEK 187
Query: 239 ALKLFDSM 246
A ++FD+M
Sbjct: 188 AKQVFDAM 195
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 238/459 (51%), Gaps = 39/459 (8%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A+ +FD + +I AY ++ L + +G+ P+ TF+ + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 71 LS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
S ++ +HS + G ESD F + LI Y+KLG L A VF EM D VWN++
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 128 IAAFAQHSDGDEALYLYKKMRR----------AGFPADQS-------------------- 157
I + + D A+ L+ M R +GF + +
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 158 --TLTSVLRACTGMSLLELGR--QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFN 213
T+ SVL AC + LE+GR + + F ++ + NA ++MY KCG ++ AK +F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 214 RM-VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
+ +++ SW++MI LA +G EAL LF M G +P+ +T +G+L AC H G+V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G F+SM+ ++ I P EHYGCM+DLLGR GKL + LI M KPD V W TLL A
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 333 CRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEP 392
C H NV++A A++ + KL+ + G V++SN YA ++ W+ V +R+ M+ + + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 393 GCSW-IEVDKQIHAFILGDKSHPQIDEISRQLNQFISRL 430
G S+ +EV +H F + DKSHP+ EI + L + R+
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRM 493
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 9/236 (3%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMFTFSSVLR 66
++ A +FD MP +NV SWTT+IS +S A+K+ + M ++ V PN T SVL
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 67 ACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
AC L ++ +++ + G +++V +A I++YSK G + A +F+E+ +
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 283
Query: 124 -WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ---AH 179
WNS+I + A H DEAL L+ +M R G D T +L AC ++ G++ +
Sbjct: 284 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 343
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQNG 234
V K L + ++D+ + G L++A + M +K D + W T++ + +G
Sbjct: 344 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 59/325 (18%)
Query: 71 LSDIKQIHSSILKVGLES--DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSII 128
++ IKQ+H+ L+ G++ D+ R LI L+ A +F ++N +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLIP------NLVYARKLFDHHQNSCTFLYNKLI 54
Query: 129 AAFAQHSDGDEALYLYK-----------------------------------KMRRAGFP 153
A+ H E++ LY + R+GF
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 154 ADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFN 213
+D T+++ A + L R+ + K +D+ + NA++ Y + G ++ A +F+
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSK--RDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLVD 272
M K+V SW+T+I+G +QNG EALK+F M K +PN+IT++ VL AC++ G ++
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 273 DGWH---YFRS---MKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
G Y R N+Y + E Y + G +D +L E+ + ++ +W
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMY-------SKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 327 RTLLDACRAHRNVDLATYAAKEILK 351
+++ + H D A ++L+
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLR 310
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 239/433 (55%), Gaps = 11/433 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M ++ A VF EM E+NVV WT+MI+ Y K D F L ++
Sbjct: 37 MLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNK--DLVSARRYFDLSP--ERDIVL 92
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+++++ + ++ + S ++ DV + +++ Y+ +G++ VF +M +
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCR-DVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAG--FPADQSTLTSVLRACTGMSLLELGRQA 178
WN +I +AQ+ E L +K+M G P D +T+T VL AC + + G+
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND-ATMTLVLSACAKLGAFDFGKWV 210
Query: 179 HVH--VLKFDQ-DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + L +++ D+ + NAL+DMY KCG++E A +F + +D+ISW+TMI GLA +G
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
EAL LF MK G P+ +T +GVL AC H GLV+DG YF SM + I P EH G
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
C++DLL RAG L V+ I++M K D V W TLL A + ++ VD+ A +E++KL+
Sbjct: 331 CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ +V+LSN Y ++ ++D A ++ MR G +KE G SWIE D + F + HP+
Sbjct: 391 NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPR 450
Query: 416 IDEISRQLNQFIS 428
+E+ R L + S
Sbjct: 451 TEELQRILRELKS 463
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 215/405 (53%), Gaps = 8/405 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK + A+ VF+E ++V WT MI Y+ + A+ L M + PN T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+SVL C + ++ + +H +KVG+ D V +AL+ +Y+K + +A VF+
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WNSII+ F+Q+ EAL+L+ +M + T+ S+ AC + L +G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 178 AHVHVLKF----DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
H + +K + + ALLD Y KCG + A+ IF+ + K+ I+WS MI G +
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G ++ +L+LF+ M +PN T +L AC H G+V++G YF SM Y P +H
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
Y CM+D+L RAG+L+ + +I +M +PDV + L C H DL K++L L
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIE 398
+D YVL+SN YA+ WN EVR M+ +G+ K G S +E
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y F ++A++VFD++PE + W M+ Y K + +KL +++ G +
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
FS L+AC L D+ K+IH ++KV D V + L+D+Y+K GE+ A VF ++
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V W S+IA + ++ +E L L+ +MR ++ T +++ ACT +S L G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 178 AHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K +L L +LLDMY KCG + +A+ +FN D++ W+ MI G NG
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG---RE 292
EAL LF MK + +PN +TI VL C GL+++ RS+ L I G
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRSVHGL-SIKVGIWDTN 378
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + + + D K + EM + D+V W +++
Sbjct: 379 VANALVHMYAKCYQNRD-AKYVFEMESEKDIVAWNSIISG 417
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 243/465 (52%), Gaps = 44/465 (9%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSS-VKLN-DRAMKLLVFMLREGV-MPNMFTFSSV 64
L A+ +FD N + +++AYSS + L+ A M+ V PN F + V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 65 LRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYS-------------------- 101
L++ YLS +H+ + K G V V++AL+ Y+
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 102 ------------KLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-R 148
+ G++ A+++F++M D WN+I+AA Q+ EA+ L+++M
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLE 206
++ T+ VL AC L+L + H + D D+ + N+L+D+Y KCG+LE
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM---KVMGPRPNYITILGVLF 263
+A +F K + +W++MI A +G S EA+ +F+ M + +P++IT +G+L
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 264 ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
AC+H GLV G YF M N +GI+P EHYGC++DLLGRAG+ D+ ++++ M K D
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
W +LL+AC+ H ++DLA A K ++ L+ + G +++N Y W + R+ +
Sbjct: 433 AIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Query: 384 RVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFIS 428
+ + K PG S IE+D ++H F DKSHP+ +EI L+ IS
Sbjct: 493 KHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 11/244 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMFT 60
Y + + A +F++MPER+V SW +++A + L A+ L M+ E + PN T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
VL AC + K IH+ + L SDVFV ++L+D+Y K G L EA SVFK
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG---FPADQSTLTSVLRACTGMSLLEL 174
WNS+I FA H +EA+ ++++M + D T +L ACT L+
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 175 GR---QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGL 230
GR + + + + L+D+ + G ++A + + M +K D W +++
Sbjct: 383 GRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC 442
Query: 231 AQNG 234
+G
Sbjct: 443 KIHG 446
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR---EGVMPN 57
+Y K LEEA VF ++++ +W +MI+ ++ ++ A+ + M++ + P+
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 58 MFTFSSVLRACEYLSDIKQIHSSI----LKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
TF +L AC + + + + G+E + LID+ + G EAL V
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 114 KEM-VTGDRVVWNSIIAAFAQHSDGDEA 140
M + D +W S++ A H D A
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLA 451
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 226/407 (55%), Gaps = 9/407 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG--VMPNM 58
+Y K + A+ VFD ++N V+W+ MI Y ++ A ++ ML M
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 59 FTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
+L C D+ + +H +K G D+ V++ +I Y+K G L +A F E
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ D + +NS+I + +E+ L+ +MR +G D +TL VL AC+ ++ L G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 176 RQAHVH--VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
H + V + + + NAL+DMY KCG L+ AK +F+ M +D++SW+TM+ G +
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM-KNLYGIDPGRE 292
G EAL LF+SM+ G P+ +T+L +L ACSH+GLVD+G F SM + + + P +
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
HY CM DLL RAG LD+ +++M +PD+ TLL AC ++N +L +K++ L
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
E T + VLLSNTY+ ++ W D A +R + +G+ K PG SW++V
Sbjct: 609 -GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 178/349 (51%), Gaps = 24/349 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPER--NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
+Y N +E A+ VFDE+P N ++W MI AY+S ++A+ L ML GV P
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 59 FTFSSVLRACEYL---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
+T+ VL+AC L D K IHS + +D++V +AL+D Y+K GEL A+ VF E
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLEL 174
M D V WN++I+ F+ H + + L+ MRR G + ST+ + A L
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 175 GRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
G+ H + + F DL++ +LD+Y K + A+ +F+ K+ ++WS MI G +
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 233 NGFSLEALKLF------DSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYFRSMKNL 284
N EA ++F D++ ++ P + I +L C+ G + G H + ++K
Sbjct: 284 NEMIKEAGEVFFQMLVNDNVAMVTP----VAIGLILMGCARFGDLSGGRCVHCY-AVKAG 338
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
+ +D ++ ++ + G L D + E+ K DV+++ +L+ C
Sbjct: 339 FILDLTVQN--TIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGC 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 161 SVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLD---MYCKCGSLEDAKFIFNRMVV 217
S+L C L LG+ H H+LK L L++ +Y C +E A+ +F+ +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 218 KDV--ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW 275
+ I+W MI A N F+ +AL L+ M G RP T VL AC+ +DDG
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG- 122
Query: 276 HYFRSMKNLYGIDPGREHYGC--MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
S N D + Y C ++D + G+L+ +K+ EM K D+V W ++
Sbjct: 123 KLIHSHVNCS--DFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGF 179
Query: 334 RAH 336
H
Sbjct: 180 SLH 182
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 249/465 (53%), Gaps = 73/465 (15%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L+ A +FDE+P+ +V ++ + ++ + L M + GV P+ +TF+ VL+A
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 68 C---EYLSDIKQIHSSILKVGLESDVFVRSALI--------------------------- 97
C E+ S+ H +++ G + +V++ALI
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 98 ----DVYSKLGELLEALSVFKEM-----------VTG--------------------DRV 122
Y+K G++ EA+ +F EM +TG D V
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WN++I+ + EAL ++K+MR AG D T+ S+L AC + LE G++ H+++
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 183 LKFDQ-------DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
L+ + NAL+DMY KCGS++ A +F + +D+ +W+T+I GLA +
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 360
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ ++++F+ M+ + PN +T +GV+ ACSH+G VD+G YF M+++Y I+P +HYG
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+D+LGRAG+L++ + M +P+ + WRTLL AC+ + NV+L YA +++L + +
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKD 480
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVD 400
++G YVLLSN YA++ W+ V +VR+ ++K G S IE D
Sbjct: 481 ESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 125/240 (52%), Gaps = 15/240 (6%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
+K ++ A+ +FD E++VV+W MIS Y + A+ + M G P++ T
Sbjct: 220 LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL 279
Query: 63 SVLRACEYLSDI---KQIHSSILKVG-LESDVFVRS----ALIDVYSKLGELLEALSVFK 114
S+L AC L D+ K++H IL+ + S ++V + ALID+Y+K G + A+ VF+
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 115 EMVTGDRVVWNSIIAAFA-QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ D WN++I A H++G ++ ++++M+R ++ T V+ AC+ ++
Sbjct: 340 GVKDRDLSTWNTLIVGLALHHAEG--SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD 397
Query: 174 LGRQAHV---HVLKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAG 229
GR+ + + ++ + ++DM + G LE+A F+ + + + I W T++
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 149/339 (43%), Gaps = 21/339 (6%)
Query: 68 CEYLSDIKQIHSSILKVGLESDVFVRSALI--DVYSKLGELLEALSVFKEMVTGDRVVWN 125
C+ + +KQIH+S++ GL S++ V LI S G L A +F E+ D + N
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK- 184
++ AQ ++ + LY +M + G D+ T T VL+AC+ + G H V++
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 185 -FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
F + + NAL+ + CG L A +F+ ++WS+M +G A+ G EA++LF
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF-----RSMKNLYGIDPGREHYGCML 298
D M P + + ++ C +D F + + + G + G
Sbjct: 202 DEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTG 358
+ LG + K + + PDVVT +LL AC +++ IL+ + +
Sbjct: 258 EALG-------IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRV-KGIRKEPGCSW 396
YV A M+ + R + V +G++ +W
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 349
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 225/413 (54%), Gaps = 8/413 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+KF+ A VFD+M +N VSWT MIS + + + + L M RE + PN T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 61 FSSVLRACEYL----SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
SVL AC L S +K+IH + G +D + +A + +Y + G + + +F+
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V+W+S+I+ +A+ D E + L +MR+ G A+ TL +++ ACT +LL
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAS 373
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H +LK F ++L NAL+DMY KCGSL A+ +F + KD++SWS+MI +G
Sbjct: 374 TVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG 433
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
EAL++F M G + + L +L AC+HAGLV++ F + Y + EHY
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHY 492
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA-TYAAKEILKLD 353
C ++LLGR GK+DD ++ M KP W +LL AC H +D+A A E++K +
Sbjct: 493 ACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSE 552
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAF 406
++ YVLLS + S ++ EVRR M+ + + K G S IE + QI +
Sbjct: 553 PDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 179/353 (50%), Gaps = 28/353 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY KF+ + VFDEM R+ VS+ ++I++ L AMKL+ M G +P
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 61 FSSVLRACEYL---SDIKQIHSSILKVG--LESDVFVRSALIDVYSKLGELLEALSVFKE 115
+S+L C + S + ++ +++ V ++ V + +AL+D+Y K + A VF +
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 210
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT----GMSL 171
M + V W ++I+ + + + + L++ M+R ++ TL SVL AC G SL
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL 270
Query: 172 LELGRQAHVHVLKFDQ----DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMI 227
++ +H F D L A + MYC+CG++ ++ +F V+DV+ WS+MI
Sbjct: 271 VK-----EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
+G A+ G E + L + M+ G N +T+L ++ AC+++ L+ F S + +
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS-----FASTVHSQIL 380
Query: 288 DPGREHY----GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
G + ++D+ + G L ++ +E+ + D+V+W ++++A H
Sbjct: 381 KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLH 432
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 11/286 (3%)
Query: 57 NMFT--FSSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
N FT SV++AC + + Q+H LK G + D V ++LI +Y+K
Sbjct: 43 NGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVR 102
Query: 111 SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM- 169
VF EM+ D V + SII + Q EA+ L K+M GF + S+L CT M
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 170 SLLELGRQAHVHVL---KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTM 226
S ++ R H VL + + ++L AL+DMY K A +F++M VK+ +SW+ M
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I+G N + LF +M+ RPN +T+L VL AC +G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ + R G + + +++ E + DVV W +++
Sbjct: 283 CHADERLTAAFMTMYCRCGNV-SLSRVLFETSKVRDVVMWSSMISG 327
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 217/403 (53%), Gaps = 8/403 (1%)
Query: 2 YVKFN-LLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
Y K N L + VF MP RN+ SW +I +S +++ L + M RE V P+ F
Sbjct: 76 YSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDF 135
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T +LRAC + K IH LK+G S +FV SAL+ +Y +G+LL A +F +M
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V++ ++ + Q + L ++++M +GF D + S+L AC + L+ G+
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
Query: 177 QAHVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++ L L NA+ DMY KC L+ A +F M +DVISWS++I G +G
Sbjct: 256 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ + KLFD M G PN +T LGVL AC+H GLV+ W YFR M+ Y I P +HY
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHY 374
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
+ D + RAG L++ K + +M KPD +L C+ + NV++ A+E+++L
Sbjct: 375 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 434
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
YV L+ Y+ + +++ +R+ M+ K I K PGCS I
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 16/254 (6%)
Query: 86 LESDVFVRSALIDVYSKLGELLE-ALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLY 144
L S+V + S L+ YSKL L +LSVF M + WN II F++ +++ L+
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 145 KKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCK 201
+M R + D TL +LRAC+ + G HV LK F L + +AL+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 202 CGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
G L A+ +F+ M V+D + ++ M G Q G ++ L +F M G + + ++ +
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 262 LFACSHAGLVD-----DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHE 316
L AC G + GW R + G++ G + D+ + LD +
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRC--SCLGLNLGN----AITDMYVKCSILDYAHTVFVN 295
Query: 317 MNCKPDVVTWRTLL 330
M+ + DV++W +L+
Sbjct: 296 MS-RRDVISWSSLI 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 53/331 (16%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVF--MLREGVMPNM 58
MYV L A+ +FD+MP R+ V +T M Y V+ + + L +F M G +
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGY--VQQGEAMLGLAMFREMGYSGFALDS 235
Query: 59 FTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
S+L AC L +K +H ++ + + +A+ D+Y K L A +VF
Sbjct: 236 VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
M D + W+S+I + D + L+ +M + G + T VL AC
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC--------- 346
Query: 176 RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM-----VVKDVISWSTMIAGL 230
AH G L + +++ R+ +V ++ ++++ +
Sbjct: 347 --AH-----------------------GGLVEKSWLYFRLMQEYNIVPELKHYASVADCM 381
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
++ G EA K + M V +P+ + VL C G V+ G R + L + P
Sbjct: 382 SRAGLLEEAEKFLEDMPV---KPDEAVMGAVLSGCKVYGNVEVGE---RVARELIQLKPR 435
Query: 291 R-EHYGCMLDLLGRAGKLDDMVKLIHEMNCK 320
+ +Y + L AG+ D+ L M K
Sbjct: 436 KASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 239/436 (54%), Gaps = 18/436 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV-MPNMF 59
MY + EA VF + N+VSW ++IS S ++AM + +LR P+ +
Sbjct: 344 MYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TFS+ + A E K +H + K+G E VFV + L+ +Y K E A VF M
Sbjct: 404 TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM 463
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V+W +I ++ + + A+ + +M R +D +L+SV+ AC+ M++L G
Sbjct: 464 KERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGE 523
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++ FD + + AL+DMY K G E A+ IF+ D+ W++M+ +Q+G
Sbjct: 524 VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHG 583
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+AL F+ + G P+ +T L +L ACSH G G + MK GI G +HY
Sbjct: 584 MVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHY 642
Query: 295 GCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
CM++L+ +AG +D+ ++LI + N + ++ WRTLL AC RN+ + YAA++ILK
Sbjct: 643 SCMVNLVSKAGLVDEALELIEQSPPGNNQAEL--WRTLLSACVNTRNLQIGLYAAEQILK 700
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV-DKQIHAFILGD 410
LD EDT ++LLSN YA + W DVAE+RR +R K+PG SWIEV + F GD
Sbjct: 701 LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Query: 411 KSHPQI-----DEISR 421
+S+P++ DE++R
Sbjct: 761 QSNPEVVSQAQDELNR 776
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 155/274 (56%), Gaps = 7/274 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYS-SVKLNDRAMKLLVFMLREGVMPNMF 59
MYV+ LE+A+ VFD+MP RNVVS+ + SAYS + A L M E V PN
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF+S+++ C L D+ ++S I+K+G +V V+++++ +YS G+L A +F +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN++I ++ ++ L ++ M +G Q T + VL C+ + LG+
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 177 QAHVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++ D DL L NALLDMYC CG + +A ++F R+ +++SW+++I+G ++NG
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 235 FSLEALKLFDSMKVMG-PRPNYITILGVLFACSH 267
F +A+ ++ + M PRP+ T + A +
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 181/378 (47%), Gaps = 19/378 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVS---------WTTMISAYSSVKLNDRAMKLLVFMLR 51
MYV+ + LE+A+ VFD+MP+RN+V+ + +M S+ S + + +++ FM
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPL 90
Query: 52 EGVMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDV---FVRSALIDVYSKLGELLE 108
+ ++ + + L +QIH+ +L G + + + LI +Y + G L +
Sbjct: 91 NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 109 ALSVFKEMVTGDRVVWNSIIAAFAQHSD-GDEALYLYKKMRRAGFPADQSTLTSVLRACT 167
A VF +M + V +N++ +A++++ D A L M + ST TS+++ C
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
Query: 168 GMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWST 225
+ + +G + ++K + ++++ ++L MY CG LE A+ IF+ + +D ++W+T
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG-WHYFRSMKNL 284
MI G +N + L F +M + G P T VL CS G G + R + +
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATY 344
D ++ +LD+ G + + + ++ P++V+W +++ C + + A
Sbjct: 331 SLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAML 387
Query: 345 AAKEILKLDAEDTGAYVL 362
+ +L++ Y
Sbjct: 388 MYRRLLRMSTPRPDEYTF 405
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 235/444 (52%), Gaps = 21/444 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM--LREGVMPNM 58
MY KF + A+ FDEMP R+ VSWT +IS Y D A KL M +++ V+ N
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNA 181
Query: 59 ----FTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
F S + + L D + H +++ + +I Y + ++ A +F
Sbjct: 182 MMDGFVKSGDMTSARRLFD-EMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFD 231
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRACTGMSLLE 173
M + V WN++I + Q+ E + L+++M+ D T+ SVL A + L
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 174 LGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
LG H V K D+ + + A+LDMY KCG +E AK IF+ M K V SW+ MI G A
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
NG + AL LF +M ++ +P+ IT+L V+ AC+H GLV++G +F M+ + G++
Sbjct: 352 LNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKI 409
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
EHYGCM+DLLGRAG L + LI M +P+ + + L AC +++++ A K+ ++
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK 411
L+ ++ G YVLL N YA K W+D V+ MR +KE GCS IE++ + FI GD
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDT 529
Query: 412 SHPQIDEISRQLNQFISRLTGAGY 435
+HP I L + + Y
Sbjct: 530 THPHRRSIHLVLGDLLMHMNEEKY 553
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 159/328 (48%), Gaps = 17/328 (5%)
Query: 11 AQVVFDEMPERNVVSWT-TMISAYSSVKLNDRAMKLLVFMLREGVM-PNMFTFSSVLRAC 68
A+ +FD+ P+R+ + +MI AY + + L + +E P+ FTF+++ ++C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 69 EYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWN 125
+ Q +HS I + G +D++V + ++D+Y+K G++ A + F EM V W
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF 185
++I+ + + + D A L+ +M D +++ + R+ +
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTH- 204
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
+ +I ++ YC ++ A+ +F+ M ++++SW+TMI G QN E ++LF
Sbjct: 205 -KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQE 263
Query: 246 MKVMGP-RPNYITILGVLFACSHAGLVDDG-W-HYFRSMKNLYGIDPGREHYGCMLDLLG 302
M+ P+ +TIL VL A S G + G W H F K L D + +LD+
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL---DKKVKVCTAILDMYS 320
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ G+++ ++ EM K V +W ++
Sbjct: 321 KCGEIEKAKRIFDEMPEK-QVASWNAMI 347
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 217/373 (58%), Gaps = 17/373 (4%)
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV-WNSIIAAF 131
D +QIH+ + K+G + + ++++L+ YS +G++ A VF E +V W ++I+A+
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 132 AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK----FDQ 187
++ + EA+ L+K+M D +T L AC + +++G + + +K
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
DL L N+LL+MY K G E A+ +F+ + KDV ++++MI G A NG + E+L+LF MK
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 248 VMGPR------PNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
+ PN +T +GVL ACSH+GLV++G +F+SM Y + P H+GCM+DL
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYV 361
R+G L D + I++M KP+ V WRTLL AC H NV+L + I +LD + G YV
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYV 382
Query: 362 LLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ---IDE 418
LSN YA+ MW++ +++R +R R+ PG SWIE+ I+ F+ G ++ + + E
Sbjct: 383 ALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGE 439
Query: 419 ISRQLNQFISRLT 431
IS L +S +T
Sbjct: 440 ISEVLRCLVSCMT 452
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 126/241 (52%), Gaps = 18/241 (7%)
Query: 11 AQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE 69
A+ VFDE PE+ N+V WT MISAY+ + + A++L M E + + + L AC
Sbjct: 119 ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACA 178
Query: 70 YLSDIK---QIHSSILKVG--LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
L ++ +I+S +K L D+ +R++L+++Y K GE +A +F E + D +
Sbjct: 179 DLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTY 238
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPAD------QSTLTSVLRACTGMSLLELGRQA 178
S+I +A + E+L L+KKM+ D T VL AC+ L+E G++
Sbjct: 239 TSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR- 297
Query: 179 HVHVLKFDQDLILHNA----LLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQN 233
H + D +L A ++D++C+ G L+DA N+M +K + + W T++ + +
Sbjct: 298 HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLH 357
Query: 234 G 234
G
Sbjct: 358 G 358
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG------- 53
MYVK E+A+ +FDE ++V ++T+MI Y+ LN +A + L +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA---LNGQAQESLELFKKMKTIDQSQD 269
Query: 54 --VMPNMFTFSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELL 107
+ PN TF VL AC + +++ S I+ L+ ++D++ + G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 108 EALSVFKEM-VTGDRVVWNSIIAAFAQHSD 136
+A +M + + V+W +++ A + H +
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 233/424 (54%), Gaps = 15/424 (3%)
Query: 11 AQVVFDEMPERNVVSWTTMI---SAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
A +FD + N + TMI S S L R L+V E + P+ TF ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 68 CE---YLSDIKQIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
C + S KQIH ++K G+ SD V++ ++ +Y + LL+A VF E+ D V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
W+ ++ + + G E L ++++M G D+ ++T+ L AC + L G+ H V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 184 K---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
K + D+ + AL+DMY KCG +E A +F ++ ++V SW+ +I G A G++ +A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 241 KLFDSMKVM-GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
+ ++ G +P+ + +LGVL AC+H G +++G +M+ Y I P EHY C++D
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA----E 355
L+ RAG+LDD + LI +M KP W LL+ CR H+NV+L A K +L L+ E
Sbjct: 366 LMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEE 425
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ A V LSN Y + + + ++VR + +G+RK PG S +EVD + F+ GD SHP
Sbjct: 426 EEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN 485
Query: 416 IDEI 419
+ +I
Sbjct: 486 LLQI 489
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+YV+ LL +A+ VFDE+P+ +VV W +++ Y L +++ ML +G+ P+ F+
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEM 116
++ L AC + + Q IH + K +ESDVFV +AL+D+Y+K G + A+ VFK++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELG 175
+ W ++I +A + +A+ +++ R G D L VL AC LE G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 176 R------QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIA 228
R +A + + ++ ++D+ C+ G L+DA + +M +K + S W ++
Sbjct: 341 RSMLENMEARYEITPKHEH---YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLN 397
Query: 229 G 229
G
Sbjct: 398 G 398
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 219/399 (54%), Gaps = 38/399 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y+K + A+++FD+M +R+ +SW TMI Y V + A L MPN
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF------SEMPN---- 340
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
D + ++ Y+ +G + A F++
Sbjct: 341 --------------------------RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVH 181
V WNSIIAA+ ++ D EA+ L+ +M G D TLTS+L A TG+ L LG Q H
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 182 VLK-FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQNGFSLEA 239
V+K D+ +HNAL+ MY +CG + +++ IF+ M +K +VI+W+ MI G A +G + EA
Sbjct: 435 VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L LF SMK G P++IT + VL AC+HAGLVD+ F SM ++Y I+P EHY +++
Sbjct: 495 LNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVN 554
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
+ G+ ++ + +I M +PD W LLDACR + NV LA AA+ + +L+ E +
Sbjct: 555 VTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP 614
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIE 398
YVLL N YA+ +W++ ++VR M K I+KE G SW++
Sbjct: 615 YVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 48/369 (13%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + EA ++F++MPERN VSW+ MI+ + D A+ L M + P
Sbjct: 146 YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV 205
Query: 62 SSVLRACEYLSDIKQI--HSSILKVGLESDVFVRSALIDVYSKLGELLEALSV------- 112
+ +++ E LS+ + L G E V+ + LI Y + G++ A +
Sbjct: 206 AGLIKN-ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDL 264
Query: 113 --------FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLR 164
F+E + V WNS+I A+ + D A L+ +M+ D+ T+
Sbjct: 265 CGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK------DRDTI----- 313
Query: 165 ACTGMSLLELGRQAHVHVLKFDQDLILH-----------NALLDMYCKCGSLEDAKFIFN 213
+ ++++ +VHV + + L N ++ Y G++E A+ F
Sbjct: 314 --SWNTMID----GYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFE 367
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDD 273
+ K +SW+++IA +N EA+ LF M + G +P+ T+ +L A + GLV+
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNL 425
Query: 274 GWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
+ + P + ++ + R G++ + ++ EM K +V+TW ++
Sbjct: 426 RLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGY 485
Query: 334 RAHRNVDLA 342
H N A
Sbjct: 486 AFHGNASEA 494
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 128/590 (21%), Positives = 222/590 (37%), Gaps = 124/590 (21%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP--NMFT 60
++ + EA+ +F+++ RN V+W TMIS Y + ++A KL M + V+ M +
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+L + +++ + D F + +I Y+K + EAL +F++M +
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA--------------- 165
V W+++I F Q+ + D A+ L++KM P S+ L A
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKM-----PVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 166 ---------------CTGMSLLELGRQAHVHVLK--FDQ-------------------DL 189
++ G++ V + FDQ ++
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 190 ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVM 249
+ N+++ Y K G + A+ +F++M +D ISW+TMI G +A LF M
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM--- 338
Query: 250 GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
P + + ++ + G V+ HYF + + + ++ + +
Sbjct: 339 -PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKE 392
Query: 310 MVKLIHEMNC---KPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNT 366
V L MN KPD T +LL A N+ L + ++K D + L
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITM 452
Query: 367 YANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQF 426
Y+ ++ E RR +++E +W +A I G H E LN F
Sbjct: 453 YSRC---GEIMESRRIFDEMKLKREV-ITW-------NAMIGGYAFHGNASE---ALNLF 498
Query: 427 ISRLTGAGYVPDTNFV----------LQDLEGEQR---------EDSLRHHSEKLAIVFG 467
S + Y FV L D Q E + H+S + + G
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 468 ----------IMSFPKEKTIRVWKNL----RI---CGDCHIFAKLIAKLE 500
I S P E VW L RI G H+ A+ +++LE
Sbjct: 559 QGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLE 608
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 231/424 (54%), Gaps = 15/424 (3%)
Query: 11 AQVVFDEMPERNVVSWTTMI---SAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
A +FD + N + TMI S S L R L+V E + P+ TF ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 68 CE---YLSDIKQIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
C + S KQIH ++K G+ SD V++ ++ +Y + L +A VF E+ D V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
W+ ++ + + G E L ++K+M G D+ ++T+ L AC + L G+ H V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 184 K---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
K + D+ + AL+DMY KCG +E A +F ++ ++V SW+ +I G A G++ +A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 241 KLFDSMKVM-GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
D ++ G +P+ + +LGVL AC+H G +++G +M+ YGI P EHY C++D
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVD 365
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA----E 355
L+ RAG+LDD + LI +M KP W LL+ CR H+NV+L A + +L L+ E
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEE 425
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQ 415
+ A V LSN Y + + + +VR + +GIRK PG S +EVD + F+ GD SHP
Sbjct: 426 EEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
Query: 416 IDEI 419
+ +I
Sbjct: 486 LLQI 489
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+YV+ LL +A+ VFDE+P+ +VV W +++ Y L +++ ML G+ P+ F+
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEM 116
++ L AC + + Q IH + K +ESDVFV +AL+D+Y+K G + A+ VF+++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELG 175
+ W ++I +A + +A ++ R G D L VL AC LE G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 176 R------QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMIA 228
R +A + + ++ ++D+ C+ G L+DA + +M +K + S W ++
Sbjct: 341 RTMLENMEARYGITPKHEH---YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
Query: 229 G 229
G
Sbjct: 398 G 398
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 242/462 (52%), Gaps = 39/462 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y +F A F M ++++SW ++ A++ + + LL +L E + + T
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 62 SSVLRAC---EYLSDIKQIHSSILKVGL---ESDVFVRSALIDVYSKLGELL-------- 107
S+L+ C + + +K++H +K GL E + + +AL+D Y+K G +
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 108 ------------------------EALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYL 143
+A +F EM T D W+ ++ +A+ +EA+ +
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD-QDLILHNALLDMYCKC 202
+++++ G + T+ ++L C ++ L L RQ H ++++ D+ L LLD+Y KC
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKC 615
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
GSL+ A +F +D++ ++ M+AG A +G EAL ++ M +P+++ I +L
Sbjct: 616 GSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTML 675
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
AC HAGL+ DG + S++ ++G+ P E Y C +DL+ R G+LDD + +M +P+
Sbjct: 676 TACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPN 735
Query: 323 VVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRT 382
W TLL AC + +DL A +L+ +++DTG +VL+SN YA W V E+R
Sbjct: 736 ANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNL 795
Query: 383 MRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLN 424
M+ K ++K GCSW+EVD Q + F+ GD SHP+ D I +N
Sbjct: 796 MKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVN 837
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 22/348 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM-LREGVMPNMF 59
MY K +++ Q +F +M + V W +++ S V M+ M + P+
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSV 123
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELL-EALSVFKE 115
TF+ VL C L D K +HS I+K GLE D V +AL+ +Y+K G + +A + F
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS---LL 172
+ D V WN+IIA F++++ +A + M + + +T+ +VL C M
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIAC 243
Query: 173 ELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
GRQ H +V++ + + N+L+ Y + G +E+A +F RM KD++SW+ +IAG
Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 230 LAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDG----WHYFRSMKNL 284
A N +A +LF ++ G P+ +TI+ +L C+ + G + R L
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G ++ R G M+ K D+++W +LDA
Sbjct: 364 EDTSVGNA----LISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 46/310 (14%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFT 60
Y++ +EEA +F M +++VSW +I+ Y+S +A +L ++ +G V P+ T
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVT 332
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEM 116
S+L C L+D+ K+IHS IL+ L D V +ALI Y++ G+ A F M
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
T D + WN+I+ AFA + L L + D T+ S+L+ C +++ +G+
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC--INVQGIGK 450
Query: 177 QAHVH-------VLKFDQDLILHNALLDMYCKCGSLE----------------------- 206
VH +L +++ L NALLD Y KCG++E
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 207 ---------DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
DA+ +F M D+ +WS M+ A++ EA+ +F ++ G RPN +T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 258 ILGVLFACSH 267
I+ +L C+
Sbjct: 571 IMNLLPVCAQ 580
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 177/417 (42%), Gaps = 70/417 (16%)
Query: 48 FMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLG 104
F L G + F V++AC +SD+ + +H + K+G + V +++++Y+K
Sbjct: 11 FRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR 70
Query: 105 ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQS-TLTSVL 163
+ + +F++M + D VVWN ++ + S G E + +K M A P S T VL
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 164 RACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSL-EDAKFIFNRMVVKDV 220
C + G+ H +++K ++D ++ NAL+ MY K G + DA F+ + KDV
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS-------------- 266
+SW+ +IAG ++N +A + F M PNY TI VL C+
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQI 249
Query: 267 HAGLVDDGW---HYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDV 323
H+ +V W H F ++ R G++++ L M K D+
Sbjct: 250 HSYVVQRSWLQTHVFVC--------------NSLVSFYLRVGRIEEAASLFTRMGSK-DL 294
Query: 324 VTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
V+W NV +A YA+ + E A+ L N + D +
Sbjct: 295 VSW-----------NVVIAGYAS------NCEWFKAFQLFHNLVHKGDVSPDSVTI---- 333
Query: 384 RVKGIRKEPGCSWIE---VDKQIHAFILGDKSHPQIDEISRQLNQFISRL--TGAGY 435
I P C+ + K+IH++IL + + L F +R T A Y
Sbjct: 334 ----ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 226/411 (54%), Gaps = 18/411 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + +EEA++ FD M ER++VSW MI Y++ D + L ML EG P+ FT
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F S+LRA + L + ++H +K+G S +RS L++ Y K G L A + +
Sbjct: 217 FGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS-LVNAYVKCGSLANAWKLHEGT 275
Query: 117 VTGDRVVWNSIIAAFAQHSD-GDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
D + ++I F+Q ++ +A ++K M R D+ ++S+L+ CT ++ + +G
Sbjct: 276 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 176 RQAHVHVLKFDQ---DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
RQ H LK Q D+ L N+L+DMY K G +EDA F M KDV SW+++IAG +
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+G +A+ L++ M+ +PN +T L +L ACSH G + GW + +M N +GI+ E
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV-----TWRTLLDACRAHRNVDLATYAAK 347
H C++D+L R+G L++ LI K +V TW LDACR H NV L+ AA
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRS---KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAAT 512
Query: 348 EILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKG-IRKEPGCSWI 397
++L ++ Y+ L++ YA + W++ R+ M+ G K PG S +
Sbjct: 513 QLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 15/352 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+K ++ A+ +FD + +R+VVSWT MIS +S + A+ L M RE V N FT
Sbjct: 56 LYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFT 115
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ SVL++C+ L +K QIH S+ K ++ VRSAL+ +Y++ G++ EA F M
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN++I + ++ D + L++ M G D T S+LRA + LE+ +
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA-QNG 234
H +K F + L +L++ Y KCGSL +A + +D++S + +I G + QN
Sbjct: 236 LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--WHYF--RSMKNLYGIDPG 290
+ +A +F M M + + + + +L C+ V G H F +S + + + G
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
++D+ ++G+++D V EM + DV +W +L+ H N + A
Sbjct: 356 NS----LIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKA 402
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 56 PNMFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
P+++ L+ C Y + KQ IH + + G S++ ++ LID+Y K G++ A +
Sbjct: 12 PSLYL--KALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 69
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F + D V W ++I+ F++ +AL L+K+M R A+Q T SVL++C + L
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCL 129
Query: 173 ELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
+ G Q H V K + +LI+ +ALL +Y +CG +E+A+ F+ M +D++SW+ MI G
Sbjct: 130 KEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
N + + LF M G +P+ T +L A
Sbjct: 190 TANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
F +L L + L+D+Y K G ++ A+ +F+R+ +DV+SW+ MI+ ++ G+ +AL LF
Sbjct: 43 FCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFK 102
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK--NLYGIDPGREHYGCMLDLLG 302
M + N T VL +C G + +G S++ N G R +L L
Sbjct: 103 EMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS---ALLSLYA 159
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVD 340
R GK+++ +L + + D+V+W ++D A+ D
Sbjct: 160 RCGKMEE-ARLQFDSMKERDLVSWNAMIDGYTANACAD 196
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 244/472 (51%), Gaps = 37/472 (7%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFT 60
Y K + +E A+ VFDEM ER+VVSW +MIS YS + K+ ML PN T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SV +AC SD+ ++H +++ ++ D+ + +A+I Y+K G L A ++F EM
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 118 TGDRVV-------------------------------WNSIIAAFAQHSDGDEALYLYKK 146
D V WN++I+ Q++ +E + +++
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGS 204
M R G + TL+S+L + T S L+ G++ H ++ D ++ + +++D Y K G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 205 LEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
L A+ +F+ + +I+W+ +I A +G S A LFD M+ +G +P+ +T+ VL A
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 265 CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVV 324
+H+G D H F SM Y I+PG EHY CM+ +L RAGKL D ++ I +M P
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 325 TWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
W LL+ ++++A +A + +++ E+TG Y +++N Y + W + VR M+
Sbjct: 537 VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Query: 385 VKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYV 436
G++K PG SWIE +K + +FI D S + E+ + + ++ Y+
Sbjct: 597 RIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 176/394 (44%), Gaps = 62/394 (15%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML------REGVM 55
Y + + +A VFDE+ RN S+ ++ AY+S ++ A L + + +
Sbjct: 67 YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAAR 126
Query: 56 PNMFTFSSVLRACEYLSDI------KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEA 109
P+ + S VL+A D +Q+H +++ G +SDVFV + +I Y+K + A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 110 LSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR-AGFPADQSTLTSVLRACTG 168
VF EM D V WNS+I+ ++Q ++ +YK M + F + T+ SV +AC
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 169 MSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI----- 221
S L G + H +++ DL L NA++ Y KCGSL+ A+ +F+ M KD +
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 222 --------------------------SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNY 255
+W+ MI+GL QN E + F M G RPN
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNT 366
Query: 256 ITILGVLFACSHAGLVDDG--WHYFR----SMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
+T+ +L + +++ + G H F + N+Y ++Y + LLG D
Sbjct: 367 VTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD- 425
Query: 310 MVKLIHEMNCKP-DVVTWRTLLDACRAHRNVDLA 342
NCK ++ W ++ A H + D A
Sbjct: 426 --------NCKDRSLIAWTAIITAYAVHGDSDSA 451
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 239/440 (54%), Gaps = 11/440 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K E + V + +P ++VV WT MIS + ++A+ + ML+ G +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+SV+ +C L +H +L+ G D ++LI +Y+K G L ++L +F+ M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRACTGMSLLELGR 176
D V WN+II+ +AQ+ D +AL L+++M+ + D T+ S+L+AC+ L +G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H V++ ++ AL+DMY KCG LE A+ F+ + KDV+SW +IAG +G
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHG 528
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
AL+++ G PN++ L VL +CSH G+V G F SM +G++P EH
Sbjct: 529 KGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHL 588
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++DLL RA +++D K E +P + +LDACRA+ ++ +++++L
Sbjct: 589 ACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKP 648
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHP 414
D G YV L +++A K W+DV+E MR G++K PG S IE++ + F + SH
Sbjct: 649 GDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Query: 415 Q-----IDEISRQLNQFISR 429
+ +SR++ QF S
Sbjct: 709 DDTVSLLKLLSREMMQFGSN 728
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 8/344 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y KF LL A+ VF+EM ER+VV WT MI YS + A L+ M +G+ P T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+L ++ ++ +H + G + D+ V ++++++Y K + +A +F +M D
Sbjct: 150 LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
V WN++I+ +A + E L L +MR G DQ T + L M LE+GR H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 181 HVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
++K FD D+ L AL+ MY KCG E + + + KDV+ W+ MI+GL + G + +
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEK 329
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGCM 297
AL +F M G + I V+ +C+ G D G + +++ Y +D +
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT--PALNSL 387
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDL 341
+ + + G LD + + MN + D+V+W ++ +NVDL
Sbjct: 388 ITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG--YAQNVDL 428
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 49 MLREGVMPNMFTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGE 105
ML ++P+ FTF S+L+AC L + IH +L G SD ++ S+L+++Y+K G
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 106 LLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA 165
L A VF+EM D V W ++I +++ EA L +MR G TL +L
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Query: 166 CTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWST 225
++ L+ V + FD D+ + N++L++YCKC + DAK +F++M +D++SW+T
Sbjct: 157 VLEITQLQCLHDFAV-IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNT 215
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
MI+G A G E LKL M+ G RP+ T
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 27/263 (10%)
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
+NS I + H D + L + M D T S+L+AC + L G H VL
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 184 --KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
F D + ++L+++Y K G L A+ +F M +DV+ W+ MI ++ G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVD-DGWHYFRSMKNLYGIDPGREHYGCMLDL 300
L + M+ G +P +T+L +L +G+++ +YG D ML+L
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL-------- 352
+ + D L +M + D+V+W T++ + N+ EILKL
Sbjct: 189 YCKCDHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNM-------SEILKLLYRMRGDG 240
Query: 353 ---DAEDTGAYVLLSNTYANSKM 372
D + GA + +S T + +M
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEM 263
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 221/381 (58%), Gaps = 6/381 (1%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIK---QIH 78
+V W +M+S + + N+ A+ LL+ + + + + +T S L+ C +++ Q+H
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGD 138
S ++ G E D V S L+D+++ +G + +A +F + D + ++ +I +
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALL 196
A YL++++ + G ADQ ++++L+ C+ ++ L G+Q H +K ++ + + AL+
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALV 485
Query: 197 DMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYI 256
DMY KCG +++ +F+ M+ +DV+SW+ +I G QNG EA + F M +G PN +
Sbjct: 486 DMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKV 545
Query: 257 TILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHE 316
T LG+L AC H+GL+++ +MK+ YG++P EHY C++DLLG+AG + +LI++
Sbjct: 546 TFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINK 605
Query: 317 MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
M +PD W +LL AC H+N L T A+++LK +D Y LSN YA MW+ +
Sbjct: 606 MPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQL 665
Query: 377 AEVRRTMRVKGIRKEPGCSWI 397
++VR + G KE G SWI
Sbjct: 666 SKVREAAKKLG-AKESGMSWI 685
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 185/343 (53%), Gaps = 23/343 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L++EA +F MP+ NVVSW +IS + K + RA++ LV M REG++ + F
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLDGFAL 241
Query: 62 SSVLRACEY---LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF---KE 115
L+AC + L+ KQ+H ++K GLES F SALID+YS G L+ A VF K
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
V VWNS+++ F + + + AL+L ++ ++ D TL+ L+ C L LG
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 176 RQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
Q H V V ++ D I+ + L+D++ G+++DA +F+R+ KD+I++S +I G ++
Sbjct: 362 LQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKS 421
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG--IDPGR 291
GF+ A LF + +G + + +L CS L GW K ++G I G
Sbjct: 422 GFNSLAFYLFRELIKLGLDADQFIVSNILKVCSS--LASLGWG-----KQIHGLCIKKGY 474
Query: 292 EH----YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
E ++D+ + G++D+ V L M + DVV+W ++
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGII 516
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 194/405 (47%), Gaps = 69/405 (17%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-REGVMPNMF 59
MYV F LL +A VFDEM ERN+V+WTTM+S Y+S ++A++L ML E N F
Sbjct: 49 MYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+S+VL+AC + DI+ ++ I K L DV + ++++D+Y K G L+EA S FKE+
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYK------------------------------K 146
+ WN++I+ + + DEA+ L+ +
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR 228
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGS 204
M+R G D L L+AC+ LL +G+Q H V+K + +AL+DMY CGS
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 205 LEDAKFIFNR---MVVKDVISWSTMIAGLAQNGFSLEALKL----------FDSMKVMGP 251
L A +F++ V V W++M++G N + AL L FDS + G
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 252 RP---NYITI-LGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
NY+ + LG+ H+ +V G+ + ++ ++DL G +
Sbjct: 349 LKICINYVNLRLGLQV---HSLVVVSGYELDYIVGSI------------LVDLHANVGNI 393
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
D KL H + K D++ + L+ C LA Y +E++KL
Sbjct: 394 QDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 65 LRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
LR C + K+ I + ++K G+ +VF+ + +I +Y L +A VF EM +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGF-PADQSTLTSVLRACTGMSLLELGRQAHV 180
V W ++++ + ++A+ LY++M + A++ ++VL+AC + ++LG +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 181 HVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLE 238
+ K D++L N+++DMY K G L +A F ++ SW+T+I+G + G E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
A+ LF M P+PN ++ + C +G VD G
Sbjct: 192 AVTLFHRM----PQPNVVS-----WNCLISGFVDKG 218
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MYVK ++ V+FD M ER+VVSWT +I + + A + M+ G+ PN T
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 61 FSSVLRACEYLSDIKQIHSSILKV----GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +L AC + +++ S++ + GLE + ++D+ + G EA + +M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA 165
+ D+ +W S++ A H + + +K+ + GFP D S TS+ A
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSLSNA 655
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 155 DQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIF 212
D + + LR C + + G HV+K Q++ + N ++ MY L DA +F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 213 NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITILGVLFACSHAGLV 271
+ M +++++W+TM++G +G +A++L+ M N VL AC G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 272 DDGWHYFRSM--KNLYG----------------------------IDPGREHYGCMLDLL 301
G + + +NL G + P + ++
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 302 GRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+AG +D+ V L H M +P+VV+W L+
Sbjct: 184 CKAGLMDEAVTLFHRMP-QPNVVSWNCLISG 213
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 230/407 (56%), Gaps = 24/407 (5%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM--------PNMF 59
L A + ++P +V + T+IS S V ++ L F L + ++ PN F
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLIS--SIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEF 113
Query: 60 TFSSVLRA----CEYLSDIKQIHSSILKV--GLESDVFVRSALIDVYSKLGELLEALSVF 113
T+ S+ +A ++ + +H+ +LK + D FV++AL+ Y+ G+L EA S+F
Sbjct: 114 TYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGD---EALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
+ + D WN+++AA+A + D E L L+ +M+ ++ +L +++++C +
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLG 230
Query: 171 LLELGRQAHVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIA 228
G AHV+VLK + L + +L+D+Y KCG L A+ +F+ M +DV ++ MI
Sbjct: 231 EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIR 290
Query: 229 GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID 288
GLA +GF E ++L+ S+ G P+ T + + ACSH+GLVD+G F SMK +YGI+
Sbjct: 291 GLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE 350
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
P EHYGC++DLLGR+G+L++ + I +M KP+ WR+ L + + H + + A K
Sbjct: 351 PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKH 410
Query: 349 ILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCS 395
+L L+ E++G YVLLSN YA W DV + R M+ + K PG S
Sbjct: 411 LLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y L EA+ +F+ + E ++ +W T+++AY++ + D ++L+ +R V PN +
Sbjct: 159 FYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELS 218
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+++++C L + + H +LK L + FV ++LID+YSK G L A VF EM
Sbjct: 219 LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS 278
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D +N++I A H G E + LYK + G D +T + AC+ L++ G Q
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQ 338
Query: 178 ---AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQN 233
+ V + + + L+D+ + G LE+A+ +M VK + W + + +
Sbjct: 339 IFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTH 398
Query: 234 G 234
G
Sbjct: 399 G 399
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 147/291 (50%), Gaps = 26/291 (8%)
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
+++ C+ L ++KQIH+ I+ +GL + S L+ + S + L ALS+ +++
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVF 72
Query: 123 VWNSIIAAFAQHSDGDE---ALYLYKKM--RRAGF-PADQSTLTSVLRACTGMSLL--EL 174
++N++I++ + + + A LY ++ R+ F ++ T S+ +A +G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA-SGFDAQWHRH 131
Query: 175 GRQAHVHVLKF----DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
GR H HVLKF + D + AL+ Y CG L +A+ +F R+ D+ +W+T++A
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 231 AQN---GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG-LVDDGWHYFRSMKNLYG 286
A + E L LF M+V RPN ++++ ++ +C++ G V W + +KN
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 287 IDPGREHYGC-MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++ + G ++DL + G L K+ EM+ + DV + ++ H
Sbjct: 249 LN---QFVGTSLIDLYSKCGCLSFARKVFDEMSQR-DVSCYNAMIRGLAVH 295
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 221/402 (54%), Gaps = 7/402 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML--REGVMPNM 58
Y K L+ EA+ VF+ + +R++V W ++S+Y + D A LL M + +
Sbjct: 186 FYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDY 245
Query: 59 FTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
FTFSS+L AC + KQIH+ + KV + D+ V +AL+++Y+K L +A F+ MV
Sbjct: 246 FTFSSLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV 304
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V WN++I FAQ+ +G EA+ L+ +M D+ T SVL +C S + +Q
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 179 HVHVLKFDQD--LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
V K L + N+L+ Y + G+L +A F+ + D++SW+++I LA +GF+
Sbjct: 365 QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
E+L++F+SM + +P+ IT L VL ACSH GLV +G F+ M Y I+ EHY C
Sbjct: 425 EESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
++DLLGRAG +D+ +++ M +P C H + + AK++L+++
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Query: 357 TGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR-KEPGCSWI 397
Y +LSN Y + WN A +R+ R K PGCSW+
Sbjct: 544 PVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 179/349 (51%), Gaps = 22/349 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAY--SSVKLNDRAMKLLVFMLR---EGVMP 56
Y K ++A +FDEMP RN+V+W +I N RA ++ R V
Sbjct: 81 YTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL 140
Query: 57 NMFTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
+ +F ++R C +++K Q+H ++K GLES F ++L+ Y K G ++EA VF
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSL 171
+ ++ D V+WN++++++ + DEA L K M + F D T +S+L AC
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR---- 256
Query: 172 LELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
+E G+Q H + K + D+ + ALL+MY K L DA+ F MVV++V+SW+ MI G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH--YFRSMKNLYGI 287
AQNG EA++LF M + +P+ +T VL +C+ + W ++M G
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI---WEIKQVQAMVTKKGS 373
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
++ R G L + + H + +PD+V+W +++ A +H
Sbjct: 374 ADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASH 421
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 144/307 (46%), Gaps = 46/307 (14%)
Query: 69 EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSII 128
++LSD+KQ H ++K G+ + +F+++ L+ Y+K+ E +A +F EM + V WN +I
Sbjct: 50 DHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 129 AAFAQHSDGD---EALYLYKKMRRAGF---PADQSTLTSVLRACTGMSLLELGRQAHVHV 182
Q DGD A + + R F D + ++R CT + ++ G Q H +
Sbjct: 110 HGVIQR-DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLM 168
Query: 183 LK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+K + +L+ Y KCG + +A+ +F ++ +D++ W+ +++ NG EA
Sbjct: 169 VKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAF 228
Query: 241 KLFDSMKVMGP-----RPNYITILGVLFACS-------HAGLVDDGWHY----FRSMKNL 284
L +K+MG R +Y T +L AC HA L + + ++ N+
Sbjct: 229 GL---LKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 285 YG----IDPGRE-----------HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTW 326
Y + RE + M+ + G+ + ++L +M N +PD +T+
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 327 RTLLDAC 333
++L +C
Sbjct: 346 ASVLSSC 352
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 226/413 (54%), Gaps = 11/413 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPE--RNVVSWTTMISAYSSVKLN-DRAMKLLVFMLREGVMPNM 58
YVK L+ A+ +FD MP +N++SW +MIS Y+ D A KL M + ++
Sbjct: 197 YVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK----DL 252
Query: 59 FTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+++S++ I+ + V DV + +ID Y+KLG + A ++F +M
Sbjct: 253 ISWNSMIDGYVKHGRIEDA-KGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRR-AGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V +NS++A + Q+ EAL ++ M + + D +TL VL A + L
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 178 AHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H++++ +F L AL+DMY KCGS++ A +F + K + W+ MI GLA +G
Sbjct: 372 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL 431
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A + ++ + +P+ IT +GVL ACSH+GLV +G F M+ + I+P +HYG
Sbjct: 432 GESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 491
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
CM+D+L R+G ++ LI EM +P+ V WRT L AC H+ + AK ++
Sbjct: 492 CMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 551
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFIL 408
+ +YVLLSN YA+ MW DV VR M+ + I K PGCSWIE+D ++H F +
Sbjct: 552 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 31/338 (9%)
Query: 64 VLRACEYLSDIKQIHSSILKVGL--ESDVFVRSALIDVYSKLGELLE-ALSVFKEM---- 116
VL +C+ D+ QIH ++K G+ S++ R L S+ L + A VF E
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 117 ----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
D +WN++I + + D +AL L M G D+ +L+ VL+AC+ + +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 173 ELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
+ G Q H + K DL L N L+ +Y KCG L ++ +F+RM +D +S+++MI G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVL--FACSHAGLVDDGWHYFRSMKNLYGID 288
+ G + A +LFD M + N I+ ++ +A + G VD F M
Sbjct: 198 VKCGLIVSARELFDLMPM--EMKNLISWNSMISGYAQTSDG-VDIASKLFADM------- 247
Query: 289 PGRE--HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAA 346
P ++ + M+D + G+++D L M + DVVTW T++D + + +A
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMID---GYAKLGFVHHAK 303
Query: 347 KEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
++ D AY + Y +K + E+ M
Sbjct: 304 TLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 22/183 (12%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ A +VF+ + +++ W MI + L + A +L+ + R + P+ T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVR------------SALIDVYSKLGELLE 108
F VL AC HS ++K GL +R ++D+ S+ G +
Sbjct: 454 FVGVLNACS--------HSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 505
Query: 109 ALSVFKEM-VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRAC 166
A ++ +EM V + V+W + + A + H + + + K + +AG+ L S + A
Sbjct: 506 AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 565
Query: 167 TGM 169
GM
Sbjct: 566 FGM 568
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 236/432 (54%), Gaps = 41/432 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + +A+ VFD E++++ W T+++AY+ L+ A++L M EGV PN+ T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
++ ++ + +R+ +D EA +F +M
Sbjct: 479 WNLIILS-----------------------LLRNGQVD---------EAKDMFLQMQSSG 506
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + + W +++ Q+ +EA+ +KM+ +G + ++T L AC ++ L +GR
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Query: 177 QAHVHVLKFDQD---LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
H ++++ Q + + +L+DMY KCG + A+ +F + ++ + MI+ A
Sbjct: 567 TIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALY 626
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G EA+ L+ S++ +G +P+ ITI VL AC+HAG ++ F + + + P EH
Sbjct: 627 GNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEH 686
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD 353
YG M+DLL AG+ + ++LI EM KPD ++L+ +C R +L Y ++++L+ +
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESE 746
Query: 354 AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV--DKQIHAFILGDK 411
E++G YV +SN YA W++V ++R M+ KG++K+PGCSWI++ ++ +H F+ DK
Sbjct: 747 PENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDK 806
Query: 412 SHPQIDEISRQL 423
+H +I+EI L
Sbjct: 807 THTRINEIQMML 818
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 189/344 (54%), Gaps = 10/344 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +L++A VFDE+P+RN V+W ++ Y N+ A++L M ++GV P T
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+ L A + + KQ H+ + G+E D + ++L++ Y K+G + A VF M
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN II+ + Q ++A+Y+ + MR D TL +++ A L+LG++
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
+ ++ F+ D++L + ++DMY KCGS+ DAK +F+ V KD+I W+T++A A++G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
S EAL+LF M++ G PN IT ++ + G VD+ F M++ GI P +
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWT 515
Query: 296 CMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRAH 336
M++ + + G ++ + + +M +P+ + L AC AH
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC-AH 558
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 23/344 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K + LE A+V+F ++ RNV SW +I + L + A+ V ML + P+ F
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 62 SSVLRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+V +AC L + +H ++K GLE VFV S+L D+Y K G L +A VF E+
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V WN+++ + Q+ +EA+ L+ MR+ G + T+++ L A M +E G+Q+
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 179 HVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H + + D IL +LL+ YCK G +E A+ +F+RM KDV++W+ +I+G Q G
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG--------WHYFRSMKNLYGID 288
+A+ + M++ + + +T+ ++ A + + G H F S L
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAST- 415
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D+ + G + D K + + + D++ W TLL A
Sbjct: 416 --------VMDMYAKCGSIVD-AKKVFDSTVEKDLILWNTLLAA 450
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 13/304 (4%)
Query: 61 FSSVLRACEY---LSDIKQIHSSILKVG--LESDVFVRSALIDVYSKLGELLEALSVFKE 115
+ +L+ C Y LS KQIH+ ILK G + ++ + L+ Y+K L A +F +
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ + W +II + + AL + +M D + +V +AC + G
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
R H +V+K + + + ++L DMY KCG L+DA +F+ + ++ ++W+ ++ G QN
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G + EA++LF M+ G P +T+ L A ++ G V++G ++ + G++
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS-HAIAIVNGMELDNIL 311
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAK----EI 349
+L+ + G L + +++ + + DVVTW ++ V+ A Y + E
Sbjct: 312 GTSLLNFYCKVG-LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 350 LKLD 353
LK D
Sbjct: 371 LKYD 374
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--- 184
+++ ++ + EAL L +M +L+ C L G+Q H +LK
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 185 -FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
+ ++ + L+ Y KC +LE A+ +F+++ V++V SW+ +I + G AL F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH----YGCMLD 299
M P+ + V AC W F + Y + G E + D
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGAL-----KWSRFGRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 300 LLGRAGKLDDMVKLIHEMNCKPD--VVTWRTLL 330
+ G+ G LDD K+ E+ PD V W L+
Sbjct: 217 MYGKCGVLDDASKVFDEI---PDRNAVAWNALM 246
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 216/425 (50%), Gaps = 38/425 (8%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A VF + NV+ + MI YS V ++ M G+ + +T++ +L++C
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 71 LSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
LSD+ K +H +++ G +R ++++Y+ G + +A VF EM + VVWN +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 128 IAAFAQHSDGDEALYLYKKM---------------------RRA----------GFPADQ 156
I F D + L+L+K+M R A GF D+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFN 213
+T+ +VL + +L+ G+ H F + + NAL+D YCK G LE A IF
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 214 RMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVD 272
+M ++V+SW+T+I+G A NG + LFD+M G PN T LGVL CS+ G V+
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 273 DGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G F M + ++ EHYG M+DL+ R+G++ + K + M + W +LL A
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 333 CRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEP 392
CR+H +V LA AA E++K++ ++G YVLLSN YA W DV +VR M+ +RK
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 393 GCSWI 397
G S I
Sbjct: 475 GQSTI 479
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 12/268 (4%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
+E +F +M ER++VSW +MIS+ S + A++L M+ +G P+ T +VL
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 68 CEYLSDI---KQIHSSILKVGLESD-VFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
L + K IHS+ GL D + V +AL+D Y K G+L A ++F++M + V
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS 303
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPA-DQSTLTSVLRACTGMSLLELGRQAH--- 179
WN++I+ A + G+ + L+ M G A +++T VL C+ +E G +
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAGLAQNG-FSL 237
+ K + + A++D+ + G + +A KF+ N V + W ++++ +G L
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Query: 238 EALKLFDSMKVM-GPRPNYITILGVLFA 264
+ + +K+ G NY+ +L L+A
Sbjct: 424 AEVAAMELVKIEPGNSGNYV-LLSNLYA 450
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
+ +IH+ +L+ L + + I + L A VF + + +V+N++I ++
Sbjct: 20 LPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL 79
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--------- 184
E+L + M+ G AD+ T +L++C+ +S L G+ H +++
Sbjct: 80 VGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 185 --------------------FDQ----DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDV 220
FD+ ++++ N ++ +C G +E +F +M + +
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
Query: 221 ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS 280
+SW++MI+ L++ G EAL+LF M G P+ T++ VL + G++D G + S
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG-KWIHS 258
Query: 281 MKNLYGIDPGREHYG-CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G+ G ++D ++G L+ + +M + +VV+W TL+
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISG 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFT 60
Y K LE A +F +M RNVVSW T+IS + + + L M+ EG V PN T
Sbjct: 280 YCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEAT 339
Query: 61 FSSVLRACEYLSDIKQIHS----SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F VL C Y +++ + + LE+ A++D+ S+ G + EA K M
Sbjct: 340 FLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Query: 117 -VTGDRVVWNSIIAAFAQHSD 136
V + +W S+++A H D
Sbjct: 400 PVNANAAMWGSLLSACRSHGD 420
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 218/396 (55%), Gaps = 14/396 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNV--VSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
+Y E A VFD M +R+ +W ++IS Y+ + + AM L M +GV P+
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 59 FTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
FTF VL+AC + ++ IH ++K G DV+V +AL+ +Y+K G++++A +VF
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ D V WNS++ + H EAL +++ M + G D+ ++SVL + G
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHG 312
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
RQ H V++ + +L + NAL+ +Y K G L A FIF++M+ +D +SW+ +I+ ++N
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN 372
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
LK F+ M +P+ IT + VL C++ G+V+DG F M YGIDP EH
Sbjct: 373 S---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH 429
Query: 294 YGCMLDLLGRAGKLDDMVKLI-HEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKL 352
Y CM++L GRAG +++ +I EM + W LL AC H N D+ AA+ + +L
Sbjct: 430 YACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL 489
Query: 353 DAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
+ ++ + LL Y+ +K DV VR+ M +G+
Sbjct: 490 EPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 154 ADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKF 210
+ S+L C + ++ G + H H++ +L + + L+ +Y CG E A
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 211 IFNRMVVKDV--ISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHA 268
+F+RM +D +W+++I+G A+ G +A+ L+ M G +P+ T VL AC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 269 GLVDDGWHYFRSM-KNLYGIDPGREHYGCMLDLLGRAGKLDDMVKL--IHEMNCKPDVVT 325
G V G R + K +G D + L+ K D+VK + +M D V+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYD-----VYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 326 WRTLLDACRAH 336
W ++L H
Sbjct: 264 WNSMLTGYLHH 274
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 214/399 (53%), Gaps = 8/399 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
MY KF LL A+ +F + E N +W TM+ Y +K + + ++L + G+ +
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSA 434
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+ +SV+ +C ++ + K +H ++K L+ + V ++LID+Y K+G+L A +F E
Sbjct: 435 SATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA 494
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
T + + WN++IA++ ++A+ L+ +M F TL ++L AC LE G+
Sbjct: 495 DT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQ 553
Query: 177 QAHVHVLKFDQD--LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H ++ + + + L L AL+DMY KCG LE ++ +F+ KD + W+ MI+G +G
Sbjct: 554 MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
A+ LFD M+ +P T L +L AC+HAGLV+ G F M Y + P +HY
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHY 672
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C++DLL R+G L++ + M PD V W TLL +C H ++ A+ + D
Sbjct: 673 SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDP 732
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPG 393
++ G Y++L+N Y+ + W + R MR G+ K G
Sbjct: 733 QNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 170/340 (50%), Gaps = 16/340 (4%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV---MPNM 58
Y K L++A +VFDEMP+R+VV+WT +IS + ++ + L M G PN
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 59 FTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T +AC L +K+ +H +K GL S FV+S++ YSK G EA F+E
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ D W SIIA+ A+ D +E+ ++ +M+ G D ++ ++ M L+ G
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQ 232
+ H V++ F D + N+LL MYCK L A+ +F R+ + + +W+TM+ G +
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG--LVDDGWHYFRSMKNLYGIDPG 290
++ ++LF ++ +G + + V+ +CSH G L+ H + +L D
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL---DLT 467
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++DL G+ G L ++ E + +V+TW ++
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAWRMFCEAD--TNVITWNAMI 505
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
L +++ ++ I+ GL ++FV S LI Y+ G+ + VF + D +WNSII A
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQ 187
+ D +L + M +G D T V+ AC + +G H VLK FD+
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+ + + + Y KCG L+DA +F+ M +DV++W+ +I+G QNG S L M
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 248 VMGP---RPNYITILGVLFACSHAGLVDDG--WHYFRSMKNLYGIDPGREHYGCMLDLLG 302
G +PN T+ ACS+ G + +G H F ++KN G+ + M
Sbjct: 220 SAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF-AVKN--GLASSKFVQSSMFSFYS 276
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
++G + E+ D+ +W +++
Sbjct: 277 KSGNPSEAYLSFRELG-DEDMFSWTSII 303
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 237/470 (50%), Gaps = 46/470 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERN-VVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y + +++A VF PE N +SW T+I+ Y+ + A+K+ V M G+ + +
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHS 262
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLG------------- 104
F +VL L +K ++H+ +LK G S+ FV S ++DVY K G
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 105 ------------------ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKK 146
+++EA +F + + VVW ++ + D L L +
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 147 M--RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK----FDQDLILHNALLDMYC 200
P D + SVL AC+ + +E G++ H H L+ D+ L+ A +DMY
Sbjct: 383 FIANETNTP-DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV--TAFVDMYS 439
Query: 201 KCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILG 260
KCG++E A+ IF+ +D + ++ MIAG A +G ++ + F+ M G +P+ IT +
Sbjct: 440 KCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMA 499
Query: 261 VLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN-C 319
+L AC H GLV +G YF+SM Y I P HY CM+DL G+A +LD ++L+ ++
Sbjct: 500 LLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQV 559
Query: 320 KPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEV 379
+ D V L+AC ++N +L +++L ++ + Y+ ++N YA+S W+++ +
Sbjct: 560 EKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRI 619
Query: 380 RRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISR 429
R MR K + GCSW +DKQ H F D SH + + I L F+++
Sbjct: 620 RHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML-HFVTK 668
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 79/323 (24%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLND-------------------- 40
+Y K LL EA+ VFDEM ERNV SW +I+AY VK N+
Sbjct: 32 LYSKSGLLREARNVFDEMLERNVYSWNAVIAAY--VKFNNVKEARELFESDNCERDLITY 89
Query: 41 ---------------RAMKLLVFMLR---EGVMPNMFTFSSVLRACEYLSDI---KQIHS 79
A+++ M R + + + FT +++++ L+++ +Q+H
Sbjct: 90 NTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHG 149
Query: 80 SILKVGLESDVFVRSALIDVYSKLGELLE------------------------------- 108
++K G + F S+LI +YSK G+ E
Sbjct: 150 VLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDI 209
Query: 109 --ALSVF-KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA 165
ALSVF + D + WN++IA +AQ+ +EAL + M G D+ + +VL
Sbjct: 210 DKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNV 269
Query: 166 CTGMSLLELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISW 223
+ + L++G++ H VLK + + + ++D+YCKCG+++ A+ ++ S
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 224 STMIAGLAQNGFSLEALKLFDSM 246
S+MI G + G +EA +LFDS+
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSL 352
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 43/209 (20%)
Query: 86 LESDVFVRSALIDVYSKLGELLEALSVFK-EMVTGDRVVWNSIIAAFAQHSDG--DEALY 142
LE +V+ +A+I Y K + EA +F+ + D + +N++++ FA+ +DG EA+
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAK-TDGCESEAIE 108
Query: 143 LYKKMRRA---GFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQD--LILHNALLD 197
++ +M R D T+T++++ ++ + G Q H ++K D ++L+
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 198 MYCKCGSLEDAKFIFNRMVVK----------------------------------DVISW 223
MY KCG ++ IFN V+ D ISW
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 224 STMIAGLAQNGFSLEALKLFDSMKVMGPR 252
+T+IAG AQNG+ EALK+ SM+ G +
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLK 257
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 198/375 (52%), Gaps = 31/375 (8%)
Query: 154 ADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQDLILHNALLDMYCKCGSLEDAKFI 211
D+ + +C + LE ++ H H L KF D L+N ++ M+ +C S+ DAK +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 212 FNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLV 271
F+ MV KD+ SW M+ + NG +AL LF+ M G +PN T L V AC+ G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 272 DDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD 331
++ + +F SMKN +GI P EHY +L +LG+ G L + + I ++ +P W + +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 332 ACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKE 391
R H ++DL Y + ++ +D + + + K N V R + + +
Sbjct: 414 YARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNL--- 470
Query: 392 PGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQR 451
+ + K++ A G YVPDT FVL D++ E +
Sbjct: 471 --TFYKDEAKEMAA------------------------KKGVVYVPDTRFVLHDIDQEAK 504
Query: 452 EDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIR 511
E +L +HSE+LAI +GI+ P KT+ + KNLR+CGDCH F K+++K+ R +++RD R
Sbjct: 505 EQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKR 564
Query: 512 YHHFRDGVCSCGDYW 526
+HHF+DG CSCGDYW
Sbjct: 565 FHHFKDGKCSCGDYW 579
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
Query: 41 RAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALI 97
R K + +L +G MP+ F + +C L + K++H L+ D + + +I
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 98 DVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQS 157
++ + + +A VF MV D W+ ++ A++ + GD+AL+L+++M + G ++
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEE 338
Query: 158 TLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHN---------ALLDMYCKCGSLEDA 208
T +V AC + +E +A +H FD H +L + KCG L +A
Sbjct: 339 TFLTVFLACATVGGIE---EAFLH---FDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
Query: 209 K 209
+
Sbjct: 393 E 393
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M+ + + + +A+ VFD M ++++ SW M+ AYS + D A+ L M + G+ PN T
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 61 FSSVLRACEYLSDIKQ--IHSSILKV--GLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +V AC + I++ +H +K G+ ++ V K G L+EA +++
Sbjct: 340 FLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDL 399
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 229/427 (53%), Gaps = 40/427 (9%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L+E+A+ +FD++ E+++VSW TMI D A+ MLR G+ P+
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 62 SSVLRACEYL---SDIKQIHSSILKVGLESDVFV-------------------------- 92
+L A S Q+H +I+K G + F+
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 93 -----RSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
R+ALI + K G + +A VF + D WN++I+ +AQ AL+L+++M
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 148 -RRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKCGS 204
+ D T+ SV A + + LE G++AH ++ + L A++DMY KCGS
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 205 LEDAKFIFNRM--VVKDVIS-WSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
+E A IF++ + IS W+ +I G A +G + AL L+ ++ + +PN IT +GV
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP 321
L AC HAGLV+ G YF SMK+ +GI+P +HYGCM+DLLG+AG+L++ ++I +M K
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 322 DVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRR 381
DV+ W LL A R H NV++A AA E+ +D G V+LSN YA++ W DVA VR
Sbjct: 609 DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVRE 668
Query: 382 TMRVKGI 388
MR + +
Sbjct: 669 EMRTRDV 675
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 173/411 (42%), Gaps = 71/411 (17%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YV+ L +A +FD MPER+ VS+TT+I Y+ AM+L M G+M N T
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 62 SSVLRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDV------------------- 99
++V+ AC +L D + + S +K+ LE VFV + L+ +
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 100 ------------YSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
YSK G + +A +F ++ D V W ++I + + DEAL Y +M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 148 RRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-------FDQDLILH-------- 192
R G + + +L A G Q H ++K F Q I+H
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 193 ------------------NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
NAL+ + K G +E A+ +F++ KD+ SW+ MI+G AQ+
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 235 FSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
AL LF M +P+ IT++ V A S G +++G + N I P
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNL 475
Query: 294 YGCMLDLLGRAGKLDDMVKLIHEMN--CKPDVVTWRTLLDACRAHRNVDLA 342
++D+ + G ++ + + H+ + W ++ H + LA
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 140/280 (50%), Gaps = 44/280 (15%)
Query: 63 SVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE---- 115
S L +C +D+ +QIH +LK GL+S+ ++ ++++++Y+K L +A SVF++
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 116 -------MVTG---DRVVWN-----------------SIIAAFAQHSDGDEALYLYKKMR 148
MV G R +W+ ++I +AQ++ EA+ L+++MR
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGR--QAHVHVLKFDQDLILHNALLDMYCKCGSLE 206
G ++ TL +V+ AC+ + + R Q+ LK + + + LL MYC C L+
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
DA+ +F+ M +++++W+ M+ G ++ G +A +LFD + + ++ ++ C
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCL 281
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGK 306
+D+ Y+ M G+ P M+DLL + +
Sbjct: 282 RKNQLDEALVYYTEMLRC-GMKPSEVM---MVDLLSASAR 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 64/259 (24%)
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFI-- 211
+ L S L +C + + GRQ H VLK D + + N++L+MY KC L DA+ +
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 212 -----------------------------FNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
F+ M + +S++T+I G AQN EA++L
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDG----------------------WHYF-- 278
F M+ +G N +T+ V+ ACSH G + D H +
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 279 ----RSMKNLYGIDPGRE--HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ + L+ P R + ML+ +AG ++ +L ++ K D+V+W T++D
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK-DIVSWGTMIDG 279
Query: 333 CRAHRNVDLATYAAKEILK 351
C +D A E+L+
Sbjct: 280 CLRKNQLDEALVYYTEMLR 298
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 241/473 (50%), Gaps = 75/473 (15%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
YV+ + +A+ VFDEMP+R++ MI A + ++ M ++G+ + F
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALID-------------VYSKLGE 105
S+L+A L D K IH +LK ESD F+ S+LID V+S LGE
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 106 ------------------LLEALSVFKEM---------------VTG------------- 119
EAL++ K+M ++G
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 120 -----------DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTG 168
D V W SII+ + ++A +K+M G + +T+ ++L ACT
Sbjct: 241 LELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 169 MSLLELGRQAHVH--VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTM 226
++ ++ G++ H + V + + +ALLDMY KCG + +A +F + K +++++M
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSM 360
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I A +G + +A++LFD M+ G + +++T +L ACSHAGL D G + F M+N Y
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR 420
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAA 346
I P EHY CM+DLLGRAGKL + ++I M +PD+ W LL ACR H N++LA AA
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAA 480
Query: 347 KEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
K + +L+ E++G +LL++ YAN+ W V +++ ++ K R+ G SW+E
Sbjct: 481 KHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + EA ++F + P++ V++ +MI Y++ L D+A++L M G + T
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 61 FSSVLRACEY--LSDIKQIHSSILKVGLESDVFVR----SALIDVYSKLGELLEALSVFK 114
F+++L AC + L+D+ Q + L + + + R + ++D+ + G+L+EA + K
Sbjct: 392 FTAILTACSHAGLTDLGQ--NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 115 EM-VTGDRVVWNSIIAAFAQHSD 136
M + D VW +++AA H +
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGN 472
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 234/437 (53%), Gaps = 16/437 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K ++ A VFDE RN+VSW ++++ + + D A+++ M++E V + T
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 61 FSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+LR C++ K IH I++ G ES+ S+LID Y+ + +A +V M
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V +++I+ A DEA+ ++ MR + T+ S+L AC+ + L +
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKW 447
Query: 178 AHVHVLKFD---QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
AH ++ D+ + +++D Y KCG++E A+ F+++ K++ISW+ +I+ A NG
Sbjct: 448 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+AL LFD MK G PN +T L L AC+H GLV G F+SM P +HY
Sbjct: 508 LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHY 566
Query: 295 GCMLDLLGRAGKLDDMVKLIHEM--NCKPDVVTWRTLLDACRAH-RNVDLATYAAKEILK 351
C++D+L RAG++D V+LI + + K W +L CR + + + + E+L+
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLE 626
Query: 352 LDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDK 411
L+ + Y+L S+T+A K W DVA +RR ++ + +R G S + F+ GDK
Sbjct: 627 LEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Query: 412 ---SHPQIDEISRQLNQ 425
S +++++ + L++
Sbjct: 687 LSQSDSELNDVVQSLHR 703
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 181/340 (53%), Gaps = 14/340 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMF 59
MY + L A+ +FDEM ER+V+SW+ +I +Y K +KL M+ E P+
Sbjct: 169 MYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCV 227
Query: 60 TFSSVLRACEYLSDI---KQIHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKE 115
T +SVL+AC + DI + +H ++ G + +DVFV ++LID+YSK ++ A VF E
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ V WNSI+A F + DEAL ++ M + D+ T+ S+LR C
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 176 RQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
+ H +++ ++ + + ++L+D Y C ++DA + + M KDV+S STMI+GLA
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACS-HAGLVDDGWHYFRSMKNLYGIDPGRE 292
G S EA+ +F M+ PN IT++ +L ACS A L W + +++ I+
Sbjct: 408 GRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D + G + +M + + + ++++W ++ A
Sbjct: 465 GTS-IVDAYAKCGAI-EMARRTFDQITEKNIISWTVIISA 502
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 51/316 (16%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPN-MFTFSSVLRACEYLSDIKQIHSSILKV 84
W ++S YS ++ R GV N F F V +AC LS + Q +S
Sbjct: 25 WREVVSGYSEIQ-------------RAGVQFNDPFVFPIVFKACAKLSWLFQGNS----- 66
Query: 85 GLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLY 144
+ D Y K G+L L F M + D V WN I+ + +E L+ +
Sbjct: 67 -----------IADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWF 115
Query: 145 KKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKC 202
K+R GF + STL V+ AC SL G + H +V++ F + N++L MY
Sbjct: 116 SKLRVWGFEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS 173
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM-KVMGPRPNYITILGV 261
SL A+ +F+ M +DVISWS +I Q+ + LKLF M P+ +T+ V
Sbjct: 174 DSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGR-----EHYGC--MLDLLGRAGKLDDMVKLI 314
L AC+ +D G ++++G R + + C ++D+ + +D ++
Sbjct: 233 LKACTVMEDIDVG-------RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVF 285
Query: 315 HEMNCKPDVVTWRTLL 330
E C+ ++V+W ++L
Sbjct: 286 DETTCR-NIVSWNSIL 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 90/236 (38%), Gaps = 49/236 (20%)
Query: 139 EALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLD 197
E + Y +++RAG D V +AC +S L G N++ D
Sbjct: 27 EVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG-----------------NSIAD 69
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
Y KCG L F+ M +D +SW+ ++ GL GF E L F ++V G PN T
Sbjct: 70 FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST 129
Query: 258 ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML---DLLGRAGKLDDMV--- 311
++ V+ AC + H + GI + CM D L D+M
Sbjct: 130 LVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERD 189
Query: 312 -------------------------KLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+++HE +PD VT ++L AC ++D+
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 208/402 (51%), Gaps = 6/402 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + L A+ ++ + ++V T+++S Y+ D A+ + + +
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+L C+ S I +H +K GL + V + LI +YSK ++ L +F+++
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMR-RAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ WNS+I+ Q A ++ +M G D T+ S+L C+ + L LG++
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + L+ F+ + + AL+DMY KCG+ A+ +F + +W++MI+G + +G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
AL + M+ G +P+ IT LGVL AC+H G VD+G FR+M +GI P +HY
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
M+ LLGRA + + LI +M+ KPD W LL AC HR +++ Y A+++ LD +
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
+ G YVL+SN YA MW+DV VR M+ G G S I
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 164/341 (48%), Gaps = 19/341 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y+K + AQ++FDEMPER+ V W +I YS A KL + ML++G P+ T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT 153
Query: 61 FSSVLR---ACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++L C ++S + +H K GLE D V++ALI YSK EL A +F+EM
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
V WN++I A++Q +EA+ ++K M T+ ++L A L
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL----- 268
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V+K D+ + +L+ Y +CG L A+ ++ ++ +++++ A+ G
Sbjct: 269 -HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
A+ F + + + + + ++G+L C + +D G + Y I G
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL-----HGYAIKSGLCTKT 382
Query: 296 CMLD-LLGRAGKLDDM--VKLIHEMNCKPDVVTWRTLLDAC 333
+++ L+ K DD+ V + E + +++W +++ C
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 7/223 (3%)
Query: 49 MLREGVMPNMFTFSSVLRAC-----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKL 103
+LR + PN FT S L+A + ++Q+ + + K GL+ V+V+++L+++Y K
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 104 GELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
G + A +F EM D VVWN++I ++++ +A L+ M + GF +TL ++L
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 164 RACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI 221
C + GR H K + D + NAL+ Y KC L A+ +F M K +
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
Query: 222 SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA 264
SW+TMI +Q+G EA+ +F +M + +TI+ +L A
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT-GMSLLELG-RQ 177
D ++S++ + + +++ + R+ + T++ L+A T + +L Q
Sbjct: 12 DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H+ K D+ + + +LL++Y K G + A+ +F+ M +D + W+ +I G ++NG+
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL---YGIDPGRE 292
+A KLF M G P+ T++ +L C G V G RS+ + G++ +
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG----RSVHGVAAKSGLELDSQ 187
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ + +L L EM K V+W T++ A
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDK-STVSWNTMIGA 226
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K +A+ VF + +W +MIS YS L RA+ + M +G+ P+ T
Sbjct: 493 MYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEIT 552
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F VL AC + + + + I + G+ + + ++ + + EAL + +M
Sbjct: 553 FLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKM 612
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM 147
+ D VW ++++A H + + Y+ +KM
Sbjct: 613 DIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 213/401 (53%), Gaps = 12/401 (2%)
Query: 8 LEEAQVVFDEMPER-NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
+ +A+ VFDEMP+ + V+++T+++ Y V A+ L M + V+ N+ T S L
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 67 ACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
A L D+ + H +K+GL+ D+ + +ALI +Y K G + A +F + D V
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VH 181
WN +I +A+ +E ++L ++M+ + ST +L +C +GR +
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 182 VLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK 241
+ D IL AL+DMY K G LE A IFNRM KDV SW+ MI+G +G + EA+
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 415
Query: 242 LFDSMKVMG--PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
LF+ M+ RPN IT L VL ACSH GLV +G F+ M Y P EHYGC++D
Sbjct: 416 LFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVD 475
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGA 359
LLGRAG+L++ +LI + D WR LL ACR + N DL + ++
Sbjct: 476 LLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPAD 535
Query: 360 YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVD 400
+LL+ T+A + N + + KG RKE G S IE++
Sbjct: 536 AILLAGTHAVA--GNPEKSLDNELN-KG-RKEAGYSAIEIE 572
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 167/337 (49%), Gaps = 18/337 (5%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A +F+ + N+ + TMI YS +RA + + +G+ + F+F + L++C
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 71 ---LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG-DRVVWNS 126
+S + +H L+ G +R+ALI Y G++ +A VF EM D V +++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD 186
++ + Q S AL L++ MR++ + STL S L A + + L AHV +K
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 187 QDLILH--NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
DL LH AL+ MY K G + A+ IF+ + KDV++W+ MI A+ G E + L
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML-----D 299
MK +PN T +G+L +C+++ + R++ +L ++ R +L D
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYS----EAAFVGRTVADL--LEEERIALDAILGTALVD 371
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ + G L+ V++ + M K DV +W ++ AH
Sbjct: 372 MYAKVGLLEKAVEIFNRMKDK-DVKSWTAMISGYGAH 407
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 161/365 (44%), Gaps = 44/365 (12%)
Query: 65 LRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
LR+C ++ +IH ++K GL+ D F S L+ +S + ++ A S+F+ + + ++
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMF 93
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
N++I ++ + + A ++ ++R G D+ + + L++C+ + +G H L+
Sbjct: 94 NTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALR 153
Query: 185 --FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAGLAQNGFSLEALK 241
F L NAL+ YC CG + DA+ +F+ M D +++ST++ G Q AL
Sbjct: 154 SGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD 213
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAG---------------LVDDGWHYFRSMKNLYG 286
LF M+ N T+L L A S G +D H ++ +YG
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG 273
Query: 287 IDPGREH---------------YGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRT 328
G + CM+D + G L++ V L+ +M KP+ T+
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 329 LLDAC----RAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMR 384
LL +C A +A +E + LDA A V + YA + E+ M+
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALV---DMYAKVGLLEKAVEIFNRMK 390
Query: 385 VKGIR 389
K ++
Sbjct: 391 DKDVK 395
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A+ +FD ++VV+W MI Y+ L + + LL M E + PN T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLES----DVFVRSALIDVYSKLGELLEALSVFKEM 116
F +L +C Y S+ + ++ + E D + +AL+D+Y+K+G L +A+ +F M
Sbjct: 331 FVGLLSSCAY-SEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPA--DQSTLTSVLRACTGMSLLEL 174
D W ++I+ + H EA+ L+ KM ++ T VL AC+ L+
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 175 GRQAH---VHVLKFDQDLILHNALLDMYCKCGSLEDA-KFIFNRMVVKDVISWSTMIAG 229
G + V F + + ++D+ + G LE+A + I N + D +W ++A
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 225/434 (51%), Gaps = 44/434 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + A+ VFDEMPERNV +W MI Y S N A+ V N T
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS---NGDAVLASGLFEEISVCRNTVT 146
Query: 61 FSSVLR----------ACEYLS----DIKQIHSSILKVGL------------------ES 88
+ +++ A E ++K + + + +G+ E
Sbjct: 147 WIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK 206
Query: 89 DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMR 148
+ FV S ++ Y ++G++ EA ++F + D V+WN++IA +AQ+ D+A+ + M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKCGSLE 206
G+ D T++S+L AC L++GR+ H ++ + + + NAL+DMY KCG LE
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+A +F + V+ V ++MI+ LA +G EAL++F +M+ + +P+ IT + VL AC
Sbjct: 327 NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
H G + +G F MK + P +H+GC++ LLGR+GKL + +L+ EM+ KP+
Sbjct: 387 HGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVL 445
Query: 327 RTLLDACRAHRNVDLATYAAKEILKLDAEDTGAY-----VLLSNTYANSKMWNDVAEVRR 381
LL AC+ H + ++A K I++ T +Y +SN YA+++ W +R
Sbjct: 446 GALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRV 504
Query: 382 TMRVKGIRKEPGCS 395
M +G+ K PG S
Sbjct: 505 EMEKRGLEKSPGLS 518
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 35/290 (12%)
Query: 64 VLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
+LRAC + K +HS +K G+ SDV V S+LI +Y K G ++ A VF EM
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMR------------------------RAGFPAD 155
+ WN++I + + D A L++++ R F
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
Query: 156 QSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNA-----LLDMYCKCGSLEDAKF 210
L +V +A + M + + + KF +D+ NA ++ Y + G + +A+
Sbjct: 171 PFELKNV-KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARA 229
Query: 211 IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGL 270
IF R+ +D++ W+T+IAG AQNG+S +A+ F +M+ G P+ +T+ +L AC+ +G
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 271 VDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK 320
+D G S+ N GI+ + ++D+ + G L++ + ++ +
Sbjct: 290 LDVG-REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 238/462 (51%), Gaps = 48/462 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY +F ++ A+ +FD M ER+ VSW +I+ Y+S + A KLL M GV ++ T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FSSV-----------------------------------LRACEYLSDIKQ---IHSSIL 82
++++ L+AC ++ +K H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 83 K-VGLESDV-FVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEA 140
+ D+ VR++LI +YS+ +L A VF+++ WNSII+ FA + +E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 141 LYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLD 197
+L K+M +GF + TL S+L + L+ G++ H ++L+ + LIL N+L+D
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
MY K G + AK +F+ M +D ++++++I G + G AL F M G +P+++T
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 258 ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
++ VL ACSH+ LV +G F M++++GI EHY CM+DL RAG LD + H +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Query: 318 NCKPDVVTWRTLLDACRAHRNVDLATYAA-KEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
+P TLL AC H N ++ +AA K +L+ E G Y+LL++ YA + W+ +
Sbjct: 588 PYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKL 647
Query: 377 AEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
V+ + G++K + +E D ++ G+ + P D+
Sbjct: 648 VTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDD 685
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 178/415 (42%), Gaps = 77/415 (18%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y FNLL+EAQ + + + + W +I +Y K ++ + M+ +G+ + FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ SV++AC L D + +H SI +++V +ALI +Y + G++ A +F M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV--------------- 162
D V WN+II + EA L +M +G A T ++
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 163 --------------------LRACTGMSLLELGRQAHVHVLK---FDQDL-ILHNALLDM 198
L+AC+ + L+ G+ H V++ F D+ + N+L+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y +C L A +F ++ + +W+++I+G A N S E L M + G PN+IT+
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 259 LGVLFACSHAGLVDDGWHY----------------FRSMKNLYG-----------IDPGR 291
+L + G + G + + S+ ++Y D R
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 292 EH----YGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRAHRNV 339
+ Y ++D GR GK + + +M+ KPD VT +L AC +H N+
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 58 MFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+++ +S+L C ++ +Q+H+ + GLE D + L+ YS L EA ++ +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
+ WN +I ++ ++ E++ +YK+M G AD+ T SV++AC +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 175 GRQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
GR H + V +L + NAL+ MY + G ++ A+ +F+RM +D +SW+ +I
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
EA KL D M + G + +T + C AG
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 238/462 (51%), Gaps = 48/462 (10%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY +F ++ A+ +FD M ER+ VSW +I+ Y+S + A KLL M GV ++ T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FSSV-----------------------------------LRACEYLSDIKQ---IHSSIL 82
++++ L+AC ++ +K H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 83 K-VGLESDV-FVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEA 140
+ D+ VR++LI +YS+ +L A VF+++ WNSII+ FA + +E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 141 LYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLD 197
+L K+M +GF + TL S+L + L+ G++ H ++L+ + LIL N+L+D
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 198 MYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
MY K G + AK +F+ M +D ++++++I G + G AL F M G +P+++T
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 258 ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
++ VL ACSH+ LV +G F M++++GI EHY CM+DL RAG LD + H +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Query: 318 NCKPDVVTWRTLLDACRAHRNVDLATYAA-KEILKLDAEDTGAYVLLSNTYANSKMWNDV 376
+P TLL AC H N ++ +AA K +L+ E G Y+LL++ YA + W+ +
Sbjct: 588 PYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKL 647
Query: 377 AEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
V+ + G++K + +E D ++ G+ + P D+
Sbjct: 648 VTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDD 685
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 178/415 (42%), Gaps = 77/415 (18%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y FNLL+EAQ + + + + W +I +Y K ++ + M+ +G+ + FT
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFT 186
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ SV++AC L D + +H SI +++V +ALI +Y + G++ A +F M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV--------------- 162
D V WN+II + EA L +M +G A T ++
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 163 --------------------LRACTGMSLLELGRQAHVHVLK---FDQDL-ILHNALLDM 198
L+AC+ + L+ G+ H V++ F D+ + N+L+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 199 YCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
Y +C L A +F ++ + +W+++I+G A N S E L M + G PN+IT+
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 259 LGVLFACSHAGLVDDGWHY----------------FRSMKNLYG-----------IDPGR 291
+L + G + G + + S+ ++Y D R
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 292 EH----YGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRAHRNV 339
+ Y ++D GR GK + + +M+ KPD VT +L AC +H N+
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 58 MFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+++ +S+L C ++ +Q+H+ + GLE D + L+ YS L EA ++ +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLEL 174
+ WN +I ++ ++ E++ +YK+M G AD+ T SV++AC +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 175 GRQAH--VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
GR H + V +L + NAL+ MY + G ++ A+ +F+RM +D +SW+ +I
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
EA KL D M + G + +T + C AG
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 221/408 (54%), Gaps = 19/408 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K+ L ++ VF+ + E+++VSW ++S + A+ + M RE V + FT
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
SSV++ C + L KQ+H+ ++ G + V + +A+I YS +G + EA+ V+ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V D V+ NS+I+ ++ + EA L + R + L+S L C+ S L +G+
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H L+ F D L N L+DMY KCG + A+ IF + K V+SW++MI A NG
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 235 FSLEALKLFDSM--KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
++AL++F M + G PN +T L V+ AC+HAGLV +G F MK Y + PG E
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEM----NCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
HY C +D+L +AG+ +++ +L+ M N W +L AC + ++ Y A+
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARR 481
Query: 349 IL-KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCS 395
++ + E+ YVL+SN YA W+ V E+R ++ KG+ K G S
Sbjct: 482 LMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 172/333 (51%), Gaps = 14/333 (4%)
Query: 6 NLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
N A +FDE+P+R++ S + +S++ + + L + + R + TF+ VL
Sbjct: 32 NFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVL 91
Query: 66 RACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
AC LS +Q+H+ ++K G E+ ++ALID+YSK G L++++ VF+ + D V
Sbjct: 92 GACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLV 151
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WN++++ F ++ G EAL ++ M R + TL+SV++ C + +L+ G+Q H V
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 183 LKFDQDL-ILHNALLDMYCKCGSLEDAKFIFNRMVV-KDVISWSTMIAGLAQNGFSLEAL 240
+ +DL +L A++ Y G + +A ++N + V D + +++I+G +N EA
Sbjct: 212 VVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 241 KLFDSMKVMGPRPNYITILGVLFACS-HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
L RPN + L CS ++ L + +++N G + ++D
Sbjct: 272 LLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN--GFVSDSKLCNGLMD 324
Query: 300 LLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
+ G+ G++ + + K VV+W +++DA
Sbjct: 325 MYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDA 356
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 207/400 (51%), Gaps = 10/400 (2%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K L A+ VF EMPERN VSWT ++ AY + A + M +
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALV 214
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
++++ + L + K++ + K D+ +++ID Y+K G+++ A +F+E D
Sbjct: 215 DGLVKSGD-LVNAKKLFDEMPK----RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA--- 178
W+++I +AQ+ +EA ++ +M D+ + ++ AC+ M EL +
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 179 -HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
H + KF ++ AL+DM KCG ++ A +F M +D++S+ +M+ G+A +G
Sbjct: 330 LHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGS 388
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
EA++LF+ M G P+ + +L C + LV++G YF M+ Y I +HY C+
Sbjct: 389 EAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
++LL R GKL + +LI M + W +LL C H N ++A A+ + +L+ +
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSA 508
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
G+YVLLSN YA W DVA +R M GI K G SWI
Sbjct: 509 GSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 162/336 (48%), Gaps = 29/336 (8%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVM-PNMFTFSSVLRACEYLS 72
VF+ +P W +I YS+ L + +L+ M+R G+ P+ +TF V++ C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 73 DIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIA 129
++ +H +L++G + DV V ++ +D Y K +L A VF EM + V W +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 130 AFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ-- 187
A+ + + +EA ++ M + + + ++++ ++ +L FD+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKL----------FDEMP 234
Query: 188 --DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D+I + +++D Y K G + A+ +F DV +WS +I G AQNG EA K+F
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 246 MKVMGPRPNYITILGVLFACSHAG---LVDDGWHYFRSMKNLYGIDPGREHY--GCMLDL 300
M +P+ ++G++ ACS G L + Y N + HY ++D+
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDM 349
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ G +D KL EM + D+V++ ++++ H
Sbjct: 350 NAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIH 384
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 18/281 (6%)
Query: 56 PNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDV-FVRSALIDVYSKLGELLEALSVFK 114
P++ + ++ + C+ + QIH+ I++ GLE D + + S L + SVF+
Sbjct: 8 PSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFE 67
Query: 115 EMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLE 173
+ + +WN +I ++ E + + +M R G D+ T V++ C+ +
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 174 LGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
+G H VL+ FD+D+++ + +D Y KC L A+ +F M ++ +SW+ ++
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
++G EA +FD M P N LG A GLV G + K L+ P R
Sbjct: 188 KSGELEEAKSMFDLM----PERN----LGSWNALVD-GLVKSG--DLVNAKKLFDEMPKR 236
Query: 292 E--HYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ Y M+D + G + L E DV W L+
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEAR-GVDVRAWSALI 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
M K ++ A +F+EMP+R++VS+ +M+ + A++L M+ EG++P+
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVR------------SALIDVYSKLGELLE 108
F+ +L+ C S +++ GL +R S ++++ S+ G+L E
Sbjct: 409 FTVILKVCG--------QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 109 ALSVFKEM-VTGDRVVWNSIIAAFAQHSDGDEA 140
A + K M W S++ + H + + A
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 212/405 (52%), Gaps = 19/405 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K A F+ +P ++ V++ + Y+ + ++A + M GV P+ T
Sbjct: 445 MYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRT 504
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF-KEM 116
+L+ C + SD + ++ I+K G +S+ V ALI++++K L A+ +F K
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
V WN ++ + H +EA+ +++M+ F + T +++RA +S L +G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
H +++ F + N+L+DMY KCG +E ++ F + K ++SW+TM++ A +G
Sbjct: 625 SVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHG 684
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ A+ LF SM+ +P+ ++ L VL AC HAGLV++G F M + I+ EHY
Sbjct: 685 LASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHY 744
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
CM+DLLG+AG + V+++ M K V W LL++ R H N+ L+ A +++KL+
Sbjct: 745 ACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP 804
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
L + Y+ + +V V R I+K P CSWIEV
Sbjct: 805 -------LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE-GVMPNMFT 60
Y F + ++V+FD + + VV W +MI Y+ L+ A+ +M E G+ P+ ++
Sbjct: 43 YSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYS 102
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F+ L+AC D K+ IH I ++GLESDV++ +AL+++Y K +L+ A VF +M
Sbjct: 103 FTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMH 162
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN++++ AQ+ AL L+ MR D +L +++ A + + ++ R
Sbjct: 163 VKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 178 AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
H V+K + L+DMYC C L A+ +F + KD SW TM+A A NGF
Sbjct: 223 LHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 238 EALKLFDSMKVMGPRPNYI 256
E L+LFD M+ R N +
Sbjct: 283 EVLELFDLMRNYDVRMNKV 301
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 175/354 (49%), Gaps = 6/354 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY L A+ VF+E+ ++ SW TM++AY+ + ++L M V N
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+S L+A Y+ D+ + IH ++ GL DV V ++L+ +YSK GEL A +F +
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V W+++IA++ Q DEA+ L++ M R + TLTSVL+ C G++ LG+
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 178 AHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H + +K D +L A++ MY KCG A F R+ +KD ++++ + G Q G
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+ +A ++ +MK+ G P+ T++G+L C+ G + + +G D
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAH 541
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
++++ + L + L + + V+W +++ H + A +++
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 13/274 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L A+ VFD+M ++VV+W TM+S + + A+ L M V + +
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 61 FSSVLRACEYL--SDI-KQIHSSILKVGLESDVFV-RSALIDVYSKLGELLEALSVFKEM 116
+++ A L SD+ + +H ++K G +F S LID+Y +L A SVF+E+
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEV 260
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D W +++AA+A + +E L L+ MR + + + + + +L +
Sbjct: 261 WRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN--YDVRMNKVAAASALQAAAYVGDLVK 318
Query: 177 QAHVHVLKFDQDLI----LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
+H Q LI + +L+ MY KCG LE A+ +F + +DV+SWS MIA Q
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
G EA+ LF M + +PN +T+ VL C+
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 7/206 (3%)
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVV 123
+LR C+ + Q+H S++ GL+ + LI+ YS + +F + V+
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 66
Query: 124 WNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAH--V 180
WNS+I + + EAL + M G D+ + T L+AC G + G + H +
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 181 HVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+ + D+ + AL++MYCK L A+ +F++M VKDV++W+TM++GLAQNG S AL
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 241 KLFDSMKVMGPRPNYITILGVLFACS 266
LF M+ +++++ ++ A S
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPAVS 212
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 6/401 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT- 60
Y K L+ EA +F +P+ ++ W MI Y D+ + L M G PN +T
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTM 210
Query: 61 --FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+S L L +H+ LK+ L+S +V AL+++YS+ + A SVF +
Sbjct: 211 VALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V +S+I +++ + EAL+L+ ++R +G D + VL +C +S G++
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 179 HVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +V++ + D+ + +AL+DMY KCG L+ A +F + K+++S++++I GL +GF+
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC 296
A + F + MG P+ IT +L C H+GL++ G F MK+ +GI+P EHY
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVY 450
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED 356
M+ L+G AGKL++ + + + D LL C H N LA A+ I K E
Sbjct: 451 MVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEER 510
Query: 357 TGAY-VLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSW 396
Y V+LSN YA W++V +R + K PG SW
Sbjct: 511 RSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 8/383 (2%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA 67
L A+ +FD PER+V W ++I AY+ + L +LR P+ FT++ + R
Sbjct: 56 LISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARG 115
Query: 68 CEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVW 124
D K IH + GL D SA++ YSK G ++EA +F + D +W
Sbjct: 116 FSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALW 175
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
N +I + D+ + L+ M+ G + T+ ++ SLL + H LK
Sbjct: 176 NVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK 235
Query: 185 FDQD--LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
+ D + AL++MY +C + A +FN + D+++ S++I G ++ G EAL L
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHL 295
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
F +++ G +P+ + + VL +C+ G + L G++ + ++D+
Sbjct: 296 FAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL-GLELDIKVCSALIDMYS 354
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD-AEDTGAYV 361
+ G L + L + + ++V++ +L+ H A EIL++ D +
Sbjct: 355 KCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 362 LLSNTYANSKMWNDVAEVRRTMR 384
L T +S + N E+ M+
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERMK 436
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 3/180 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + + A VF+ + E ++V+ +++I+ YS + A+ L + G P+
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVL 310
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ VL +C LSD K++HS ++++GLE D+ V SALID+YSK G L A+S+F +
Sbjct: 311 VAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ V +NS+I H A + ++ G D+ T +++L C LL G++
Sbjct: 371 EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE 430
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 17/275 (6%)
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFA 132
+ +++HS + K L D + + L Y+ +L+ A +F +WNSII A+A
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH----VHVLKFDQD 188
+ L L+ ++ R+ D T + R + + R H V L FDQ
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQ- 141
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
I +A++ Y K G + +A +F + D+ W+ MI G GF + + LF+ M+
Sbjct: 142 -ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGW--HYFRSMKNLYGIDPGREHYGCML-DLLGRAG 305
G +PN T++ + L+ W H F NL + GC L ++ R
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL----DSHSYVGCALVNMYSRCM 256
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLLDA---CRAHR 337
+ + + ++ +PD+V +L+ C H+
Sbjct: 257 CIASACSVFNSIS-EPDLVACSSLITGYSRCGNHK 290
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 233/478 (48%), Gaps = 72/478 (15%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
Y + LE+A VFDEMP+ +V+SW +++S Y + L + + R V PN F+
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 61 FSSVLRACE--YLSDIKQ-IHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEM 116
F++ L AC +LS + IHS ++K+GLE +V V + LID+Y K G + +A+ VF+ M
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 117 VTGDRVVWNSIIA-------------------------------AFAQHSDGDEALYLYK 145
D V WN+I+A AF + D + A +
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ------------------ 187
M + + LT + + E + H ++FD+
Sbjct: 279 DMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPW 338
Query: 188 ---------------DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
+++ +AL+DMY KCG L+ A+ +F M K++I W+ MI+G A+
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 233 NGFSLEALKLFDSMKVMG-PRPNYITILGVLFACSHAGL-VDDGWHYFRSMKNLYGIDPG 290
NG S+EA+KLF+ +K +P+ T L +L CSH + ++ YF M N Y I P
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPS 458
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA-TYAAKEI 349
EH ++ +G+ G++ ++I E D V WR LL AC A +++ A T AAK I
Sbjct: 459 VEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMI 518
Query: 350 LKLDAE-DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAF 406
DA+ D Y+++SN YA + W +V ++R+ MR G+ KE G SWI+ + ++
Sbjct: 519 ELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 17/268 (6%)
Query: 25 SWTTMISA---YSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE---YLSDIKQIH 78
SW+T++ A + S+ + ++ V ++ +G P+ +LR Y+S +Q+H
Sbjct: 23 SWSTIVPALARFGSIGV----LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGD 138
+ K G S+ + ++L+ Y L +A VF EM D + WNS+++ + Q
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF---DQDLILHNAL 195
E + L+ ++ R+ ++ + T+ L AC + L LG H ++K ++++ N L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 196 LDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNY 255
+DMY KCG ++DA +F M KD +SW+ ++A ++NG L F M P P+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDT 254
Query: 256 ITILGVLFACSHAGLVDDGWHYFRSMKN 283
+T ++ A +G ++ + M N
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPN 282
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 194/397 (48%), Gaps = 43/397 (10%)
Query: 44 KLLVFMLREGVMPNMFTFSSVLRACEY-----LSDIKQIHSSILKVGLESDVFVRSALID 98
+ V M R V P+ TF V +AC L+ +K +H L+ GL SD+F + LI
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 99 VYS-------------------------------KLGELLEALSVFKEMVTGDRVVWNSI 127
VYS K E++ A +F M D V WNS+
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--F 185
I+ +AQ + EA+ L+ +M G D + S L AC + G+ H + +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D L L+D Y KCG ++ A IF K + +W+ MI GLA +G + F
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
M G +P+ +T + VL CSH+GLVD+ + F M++LY ++ +HYGCM DLLGRAG
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 306 KLDDMVKLIHEM----NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYV 361
+++ ++I +M + ++ W LL CR H N+++A AA + L ED G Y
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 362 LLSNTYANSKMWNDVAEVRRTM-RVKGIRKEPGCSWI 397
++ YAN++ W +V +VR + R K ++K G S +
Sbjct: 461 VMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 13/261 (4%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
VK + A+ +FD MP R++VSW ++IS Y+ + A+KL M+ G+ P+
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 63 SVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
S L AC D K IH + L D F+ + L+D Y+K G + A+ +F+
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
WN++I A H +G+ + ++KM +G D T SVL C+ L++ R
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 180 VHVLKF---DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD------VISWSTMIAGL 230
+ ++++ + + D+ + G +E+A + +M KD +++WS ++ G
Sbjct: 374 DQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM-PKDGGNREKLLAWSGLLGGC 432
Query: 231 AQNGFSLEALKLFDSMKVMGP 251
+G A K + +K + P
Sbjct: 433 RIHGNIEIAEKAANRVKALSP 453
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 189/342 (55%), Gaps = 23/342 (6%)
Query: 77 IHSSILKVGL--ESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQH 134
+H + K+G ES++ + + L+ Y+K G+L A VF EM V WN++I + H
Sbjct: 133 VHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 135 SD-----GDEALYLYKKMRRAGF---PADQSTLTSVLRACTGMSLLELGRQAHVHVLKF- 185
D +A+ L+++ G P D +T+ VL A + LLE+G H ++ K
Sbjct: 192 KDKGNHNARKAMVLFRRFSCCGSGVRPTD-TTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 186 ---DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKL 242
+ D+ + AL+DMY KCG L +A +F M VK+V +W++M GLA NG E L
Sbjct: 251 FTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNL 310
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
+ M G +PN IT +L A H GLV++G F+SMK +G+ P EHYGC++DLLG
Sbjct: 311 LNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLG 370
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAED---TGA 359
+AG++ + + I M KPD + R+L +AC + + K +L+++ ED +G+
Sbjct: 371 KAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGS 430
Query: 360 ----YVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
YV LSN A+ W +V ++R+ M+ + I+ PG S++
Sbjct: 431 ECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 16/237 (6%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSV--KLNDRAMKLLVFMLR-----EG 53
Y K L A+ VFDEMPER V+W MI Y S K N A K +V R G
Sbjct: 156 FYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSG 215
Query: 54 VMPNMFTFSSVLRACEYLSDIK---QIHSSILKVGL--ESDVFVRSALIDVYSKLGELLE 108
V P T VL A ++ +H I K+G E DVF+ +AL+D+YSK G L
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 109 ALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTG 168
A SVF+ M + W S+ A + G+E L +M +G ++ T TS+L A
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 169 MSLLELGRQAHVHV-LKFDQDLIL--HNALLDMYCKCGSLEDA-KFIFNRMVVKDVI 221
+ L+E G + + +F ++ + ++D+ K G +++A +FI + D I
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L A VF+ M +NV +WT+M + + + LL M G+ PN T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 61 FSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F+S+L A ++ I+ S + G+ + ++D+ K G + EA M
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 117 -VTGDRVVWNSIIAA 130
+ D ++ S+ A
Sbjct: 386 PIKPDAILLRSLCNA 400
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 219/404 (54%), Gaps = 16/404 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFM-LREGVMPNMFT 60
Y++ L+EA+ VFD++PE++ VSW +IS+Y+ A L M L+ N+
Sbjct: 180 YLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILI 239
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
V C + + ++ + S + +I Y+KLG++ A +F+ M D
Sbjct: 240 GGYV--NCREMKLARTYFDAMPQKNGVSWI----TMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLLELGR-- 176
++V++++IA + Q+ +AL L+ +M R + D+ TL+SV+ A + + G
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 177 QAHV--HVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
++++ H +K D +L +L+D+Y K G A +F+ + KD +S+S MI G NG
Sbjct: 354 ESYITEHGIKIDD--LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ EA LF +M PN +T G+L A SH+GLV +G+ F SMK+ + ++P +HY
Sbjct: 412 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHY 470
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
G M+D+LGRAG+L++ +LI M +P+ W LL A H NV+ A +KL+
Sbjct: 471 GIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLET 530
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIE 398
+ TG L+ Y++ W+D VR +++ K + K GCSW+E
Sbjct: 531 DPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 32/339 (9%)
Query: 25 SWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIHSSI 81
SW ++ S + + + + M G+ P+ +SVLRAC E + D K IH+
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEAL 141
LK GL V+V++ L+ +YS+LG + A F ++ + V WNS++ + + + DEA
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 142 YLYKKMRRAGFPADQSTLTSVLR------ACTGMSLLELGRQAHVHVL------------ 183
++ K+ + ++S + AC+ S + L A ++L
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 184 ---KFD----QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
FD ++ + ++ Y K G ++ A+ +F M KD + + MIA QNG
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 237 LEALKLFDSMKVMGP--RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ALKLF M +P+ IT+ V+ A S G G + S +GI
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLS 369
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDAC 333
++DL + G K+ +N K D V++ ++ C
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGC 407
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 110/294 (37%), Gaps = 68/294 (23%)
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
D W ++ +QH E + +Y M +G P +TSVLRAC M + G+ H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 180 VHVLK-----------------------------FD----QDLILHNALLDMYCKCGSLE 206
LK FD ++ + N+LL Y + G L+
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+A+ +F+++ KD +SW+ +I+ A+ G A LF +M + P ++ ++G C
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP-ASWNILIGGYVNCR 246
Query: 267 HAGLVDDGWHYFRSMKNLYGID--------------------------PGREHYGCMLDL 300
L YF +M G+ + Y M+
Sbjct: 247 EMKLART---YFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 301 LGRAGKLDDMVKLIHEM-----NCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
+ GK D +KL +M +PD +T +++ A N T+ I
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 195/393 (49%), Gaps = 39/393 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + E A+ V D MP R+ VSW +++SAY L D A L M V F
Sbjct: 184 VYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNF- 242
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+I Y+ G + EA VF M D
Sbjct: 243 -----------------------------------MISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
V WN+++ A+A +E L ++ KM + D TL SVL AC + L G H
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 180 VHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
V++ K ++ L AL+DMY KCG ++ A +F +DV +W+++I+ L+ +G
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
+AL++F M G +PN IT +GVL AC+H G++D F M ++Y ++P EHYGCM
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Query: 298 LDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
+DLLGR GK+++ +L++E+ + +LL AC+ ++ A A +L+L+ D+
Sbjct: 448 VDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDS 507
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
Y +SN YA+ W V + RR MR + + +
Sbjct: 508 SGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 43/330 (13%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A + + + N + ++I AY++ + A+ + ML V P+ ++F+ VL+AC
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 71 L---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+ +QIH +K GL +DVFV + L++VY + G A V M D V WNS+
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSL 212
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ 187
++A+ + DEA L+ +M ++
Sbjct: 213 LSAYLEKGLVDEARALFDEME-------------------------------------ER 235
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM- 246
++ N ++ Y G +++AK +F+ M V+DV+SW+ M+ A G E L++F+ M
Sbjct: 236 NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKML 295
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGK 306
+P+ T++ VL AC+ G + G + + +GI+ ++D+ + GK
Sbjct: 296 DDSTEKPDGFTLVSVLSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 307 LDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+D ++ + K DV TW +++ H
Sbjct: 355 IDKALE-VFRATSKRDVSTWNSIISDLSVH 383
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 22/274 (8%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGE---LLEALSVFKEMVTGDRVVWNSI 127
L++I+Q H+ +LK GL D F S L+ + E + A S+ + + + NS+
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--F 185
I A+A S + AL ++++M D+ + T VL+AC E GRQ H +K
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D+ + N L+++Y + G E A+ + +RM V+D +SW+++++ + G EA LFD
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK-----NLYGIDPGREHYGCMLDL 300
M+ I G + AGLV + F SM + + H GC ++
Sbjct: 232 MEERNVESWNFMISGY----AAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV 287
Query: 301 LGRAGK-LDDMVKLIHEMNCKPDVVTWRTLLDAC 333
L K LDD + KPD T ++L AC
Sbjct: 288 LEVFNKMLDDSTE-------KPDGFTLVSVLSAC 314
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 225/412 (54%), Gaps = 7/412 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + + + A VF M +R+VVSW +I + S + A+ M + P+ +T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S V+ C L ++ KQ + +K+G S+ V A ID++SK L +++ +F+E+
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE 297
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V+ NS+I +++ H G++AL L+ D+ T +SVL + + +L+ G
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGAD 356
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V+K FD D + +L++MY K GS++ A +F + KD+I W+T+I GLA+N
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 236 SLEALKLFDSMKV-MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
++E+L +F+ + + +P+ +T++G+L AC +AG V++G F SM+ +G++PG EHY
Sbjct: 417 AVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHY 476
Query: 295 GCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA 354
C+++LL R G +++ + ++ +P W +L A + LA AK +L+ +
Sbjct: 477 ACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEP 536
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAF 406
+ + Y++L Y + W + ++R M ++ G S I ++ + +F
Sbjct: 537 KSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 6/330 (1%)
Query: 4 KFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
K L A +FDEMPER+VVSW TMIS S ++ +++ M R + P FTFS
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 64 VLRACEYLSDIKQIHSSILKVGLES-DVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV 122
+ + +QIH + + G+ ++ V ++++D+Y +LG ALSVF M D V
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 123 VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV 182
WN +I + + + + AL + MR D+ T++ V+ C+ + L G+QA
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 183 LK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEAL 240
+K F + I+ A +DM+ KC L+D+ +F + D + ++MI + + +AL
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
+LF RP+ T VL + +A ++D G + L G D ++++
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVIKL-GFDLDTAVATSLMEM 379
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ G +D + + + + K D++ W T++
Sbjct: 380 YFKTGSVDLAMGVFAKTDGK-DLIFWNTVI 408
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D++ I N L K G L +A +F+ M +DV+SW+TMI+GL GF +++F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 246 MKVMGPRPNYIT--ILGVLFACSHAGLVDDGWHYFRSMKNLYG--IDPGREHY-----GC 296
M+ RP T IL L C G + ++G I G Y
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHG------------EQIHGNAICSGVSRYNLVVWNS 174
Query: 297 MLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
++D+ R G D + + M + DVV+W L+ +C N ++A
Sbjct: 175 VMDMYRRLGVFDYALSVFLTMEDR-DVVSWNCLILSCSDSGNKEVA 219
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 190/356 (53%), Gaps = 7/356 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y L EA+ +FD MPERN+VSW M+ Y D A+ L M +E + T
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+L C +SD+ KQ H I + G +++V V +AL+D+Y K G L A F++M
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE 458
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D V WN+++ A+ ++AL ++ M+ P+ + TL ++L C + L LG+
Sbjct: 459 LRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPS-KYTLATLLAGCANIPALNLGKA 517
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +++ + D+++ A++DMY KC + A +F +D+I W+++I G +NG
Sbjct: 518 IHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGR 577
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
S E +LF ++ G +P+++T LG+L AC G V+ G+ YF SM Y I P EHY
Sbjct: 578 SKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYD 637
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
CM++L + G L + + + M P + + DAC+ +R L +AAK ++
Sbjct: 638 CMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 43/368 (11%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K +++A+ +F+EMPER+ SW +I+A + ++D ++ M R+GV +F
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 62 SSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ VL++C + D++ Q+H +++K G +V + ++++DVY K + +A VF E+V
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
V WN I+ + + DEA+ ++ KM T++SV+ AC+ LE+G+
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 179 HVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H +K D ++ ++ DMY KC LE A+ +F++ KD+ SW++ ++G A +G +
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN------------- 283
EA +LFD M P N ++ +L HA D+ + M+
Sbjct: 346 REARELFDLM----PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 284 ------LYGIDPGREHYG---------------CMLDLLGRAGKLDDMVKLIHEMNCKPD 322
+ + G++ +G +LD+ G+ G L +M+ D
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 323 VVTWRTLL 330
V+W LL
Sbjct: 462 EVSWNALL 469
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 185/372 (49%), Gaps = 44/372 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K ++ +A+ VFDE+ + VSW ++ Y + ND A+ + ML V P T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
SSV+ AC L K IH+ +K+ + +D V +++ D+Y K L A VF +
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 118 TGDR-------------------------------VVWNSIIAAFAQHSDGDEALYLYKK 146
+ D V WN+++ + + DEAL
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGS 204
MR+ D TL +L C+G+S +++G+QAH + + +D ++I+ NALLDMY KCG+
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 205 LEDAKFIFNRMV-VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLF 263
L+ A F +M ++D +SW+ ++ G+A+ G S +AL F+ M+V +P+ T+ +L
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLA 504
Query: 264 ACSHAGLVDDG--WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKP 321
C++ ++ G H F +++ Y ID G M+D+ + D +++ E +
Sbjct: 505 GCANIPALNLGKAIHGFL-IRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR- 560
Query: 322 DVVTWRTLLDAC 333
D++ W +++ C
Sbjct: 561 DLILWNSIIRGC 572
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 61 FSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+ + R+C + +++ S ++ +F+ + I+ Y K G + +A +F+EM
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
D WN++I A AQ+ DE ++++M R G A +++ VL++C + L L RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H V+K + ++ L +++D+Y KC + DA+ +F+ +V +SW+ ++ + GF
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
+ EA+ +F M + RP T+ V+ ACS + ++ G
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 207/413 (50%), Gaps = 39/413 (9%)
Query: 23 VVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP-NMFTFSSVLRACEYLSDI---KQIH 78
++S T +S+Y++ +++A+ L + M +P + FS L++C +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGD 138
+ +K S+ FV AL+D+Y K + A +F E+ + VVWN++I+ +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 139 EALYLY---------------------------------KKMRRAGFPADQSTLTSVLRA 165
EA+ LY +KM F + TL +++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 166 CTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISW 223
C+ + L ++ H + + + L + L++ Y +CGS+ + +F+ M +DV++W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 224 STMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN 283
S++I+ A +G + ALK F M++ P+ I L VL ACSHAGL D+ YF+ M+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLAT 343
YG+ ++HY C++D+L R G+ ++ K+I M KP TW LL ACR + ++LA
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 344 YAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSW 396
AA+E+L ++ E+ YVLL Y + + +R M+ G++ PG SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 12 QVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY- 70
Q+VFD M +R+VV+W+++ISAY+ + A+K M V P+ F +VL+AC +
Sbjct: 237 QLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA 296
Query: 71 -LSDIKQIHSSILK--VGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRV-VWNS 126
L+D ++ ++ GL + S L+DV S++G EA V + M W +
Sbjct: 297 GLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 127 IIAA 130
++ A
Sbjct: 357 LLGA 360
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 193/367 (52%), Gaps = 38/367 (10%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y K LE++++ FD + ++N+V W ++S Y++ K + L + ML+ G P +TF
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTF 419
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALI------------------------ 97
S+ L++C +++++Q+HS I+++G E + +V S+L+
Sbjct: 420 STALKSC-CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 98 --------DVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR 149
+YS+ G+ E++ + + D V WN IAA ++ +E + L+K M +
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 150 AGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD---QDLILHNALLDMYCKCGSLE 206
+ D+ T S+L C+ + L LG H + K D D + N L+DMY KCGS+
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 207 DAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACS 266
+F K++I+W+ +I+ L +G+ EAL+ F +G +P+ ++ + +L AC
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTW 326
H G+V +G F+ MK+ YG++P +HY C +DLL R G L + LI EM D W
Sbjct: 659 HGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Query: 327 RTLLDAC 333
RT LD C
Sbjct: 718 RTFLDGC 724
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 34/365 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + +LLE A+ VF++MP +++ +W M+S M ++R G +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
F VL+ + D+ KQ+H S K GL+ ++ V ++LI Y K G A +F++
Sbjct: 218 FLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG 277
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ D V WN+II A A+ + +AL L+ M GF +Q T SVL + + LL GRQ
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ 337
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H ++K + ++L NAL+D Y KCG+LED++ F+ + K+++ W+ +++G A
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG 397
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACS-------HAGLVDDGW----HYFRSMKNL 284
+ L LF M MG RP T L +C H+ +V G+ + S+
Sbjct: 398 PI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRS 456
Query: 285 YGIDPGREHYGCMLD----------------LLGRAGKLDDMVKLIHEMNCKPDVVTWRT 328
Y + +LD + R G+ + VKLI + +PD V+W
Sbjct: 457 YAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNI 515
Query: 329 LLDAC 333
+ AC
Sbjct: 516 AIAAC 520
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + A VFD+MPERN VS+ T+I YS D+A + M G +PN T
Sbjct: 58 LYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
Query: 61 FSSVLRACEYLSDIK---QIHSSILKVGL-ESDVFVRSALIDVYSKLGELLEALSVFKEM 116
S +L +C L D++ Q+H LK GL +D FV + L+ +Y +L L A VF++M
Sbjct: 118 VSGLL-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
WN +++ E ++ ++++ R G +S+ VL+ + + L++ +
Sbjct: 176 PFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNG 234
Q H K D ++ + N+L+ Y KCG+ A+ +F D++SW+ +I A++
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 235 FSLEALKLFDSMKVMGPRPN---YITILGV-----LFACS---HAGLVDDGWHYFRSMKN 283
L+ALKLF SM G PN Y+++LGV L +C H L+ +G
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE------- 348
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
GI G ++D + G L+D +L + ++V W LL
Sbjct: 349 -TGIVLGNA----LIDFYAKCGNLED-SRLCFDYIRDKNIVCWNALLSG 391
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 7/236 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y + E+ + + + + VSW I+A S ++ ++L ML+ + P+ +T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEM 116
F S+L C L D+ IH I K +D FV + LID+Y K G + + VF+E
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC--TGMSLLEL 174
+ + W ++I+ H G EAL +K+ GF D+ + S+L AC GM +
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 175 GRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK-DVISWSTMIAG 229
G + + ++ + +D+ + G L++A+ + M D W T + G
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 13/283 (4%)
Query: 63 SVLRACEYLSDIKQIH--SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+V R + K +H S L L V+V + +I +Y KLGE+ A VF +M +
Sbjct: 20 NVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERN 79
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHV 180
+V +N+II ++++ D D+A ++ +MR G+ +QST++ +L +C + + G Q H
Sbjct: 80 KVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD-VRAGTQLHG 137
Query: 181 HVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSL 237
LK F D + LL +Y + LE A+ +F M K + +W+ M++ L GF
Sbjct: 138 LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK 197
Query: 238 EALKLFDSMKVMGPRPNYITILGVL--FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
E + F + MG + LGVL +C + H + K G+D
Sbjct: 198 ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKK---GLDCEISVVN 254
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRN 338
++ G+ G ++ + D+V+W ++ A N
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAG-SWDIVSWNAIICATAKSEN 296
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 193/400 (48%), Gaps = 15/400 (3%)
Query: 130 AFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQ 187
AF +H +ALY + + D S L + + C L+ + H +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
DL ++ LL+MY CG +A +F +M K++ +W +I A+NGF +A+ +F K
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
G P+ G+ +AC G VD+G +F SM YGI P E Y ++++ G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTY 367
D+ ++ + M +P+V W TL++ R H N++L Y A+ + LD T
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP-----------TR 456
Query: 368 ANSKMWNDVAEVRRT-MRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQF 426
N + V+ + + + ++K G V + F GD + P+ DE+ + L
Sbjct: 457 LNKQSREGFIPVKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNL 515
Query: 427 ISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRIC 486
+ GYV +T L D++ E +E L HSE++A +++ K V KNLR+C
Sbjct: 516 KMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVC 575
Query: 487 GDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
DCH K+++ + R ++ RD R+H ++G C+C DYW
Sbjct: 576 VDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 25/249 (10%)
Query: 1 MYVKFNLLEEAQV-------VFDEMPERNVVSWTT--MISAYSSVKLNDRAMKLLVFMLR 51
+Y + ++LEEA+V E N + + T MI Y + + + K L +
Sbjct: 185 VYYEVSVLEEAKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDI 244
Query: 52 EGVMPNMFTFSSVLR------ACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGE 105
M + S +LR E L + K +H I D+ L+++YS G
Sbjct: 245 LASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGL 304
Query: 106 LLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA 165
EA SVF++M + W II FA++ G++A+ ++ + + G D + A
Sbjct: 305 ANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYA 364
Query: 166 CTGMSLLELGRQAHVHVLKFDQDLIL------HNALLDMYCKCGSLEDAKFIFNRMVVK- 218
C + ++ G +H +D + + +L++MY G L++A RM ++
Sbjct: 365 CGMLGDVDEGL---LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEP 421
Query: 219 DVISWSTMI 227
+V W T++
Sbjct: 422 NVDVWETLM 430
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 200/411 (48%), Gaps = 41/411 (9%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEYLSDIKQI--HSSIL 82
+ T+I +Y + ++ L ML V PN TF S+++A C S + H L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 83 KVGLESDVFVRSALIDVYSKLGELLE-------------------------------ALS 111
K G D FV+++ + Y ++G+L A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 112 VFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM---RRAGFPADQSTLTSVLRACTG 168
F+ M D V W ++I F++ +AL ++ +M RA +++T SVL +C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 169 MSL--LELGRQAHVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWS 224
+ LG+Q H +V+ + L ALLDMY K G LE A IF+++ K V +W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 225 TMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL 284
+I+ LA NG +AL++F+ MK PN IT+L +L AC+ + LVD G F S+ +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATY 344
Y I P EHYGC++DL+GRAG L D I + +PD LL AC+ H N +L
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 345 AAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCS 395
K+++ L + G YV LS A W++ ++R+ M GIRK P S
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 15 FDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML---REGVMPNMFTFSSVLRACEYL 71
F MP +VVSWTT+I+ +S L+ +A+ + M+ R + PN TF SVL +C
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 72 SD-----IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
KQIH ++ + + +AL+D+Y K G+L AL++F ++ WN+
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
II+A A + +AL +++ M+ + + TL ++L AC L++LG Q
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 220/433 (50%), Gaps = 53/433 (12%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLL--VFMLREGVM---PNMFTFSSVL 65
A +F+++P ++VV++ IS + + M L+ VF L PN TF + +
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGL----MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAI 238
Query: 66 RACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE------- 115
AC L ++ +Q+H ++K + + V +ALID+YSK A VF E
Sbjct: 239 TACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL 298
Query: 116 ----------MVTG-------------------DRVVWNSIIAAFAQHSDGDEALYLYKK 146
M+ G D WNS+I+ F+Q EA +++
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFER 358
Query: 147 MRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQDLILHNALLDMYCKCGS 204
M LTS+L AC+ + L+ G++ H HV+K ++D+ + +L+DMY KCG
Sbjct: 359 MLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGL 418
Query: 205 LEDAKFIFNRM--VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
A+ IF+R KD + W+ MI+G ++G A+++F+ ++ P+ T VL
Sbjct: 419 SSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVL 478
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
ACSH G V+ G FR M+ YG P EH GCM+DLLGR+G+L + ++I +M+ +P
Sbjct: 479 SACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS-EPS 537
Query: 323 VVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRT 382
+ +LL +CR H + L AA ++ +L+ E+ +V+LS+ YA + W DV +R+
Sbjct: 538 SSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQV 597
Query: 383 MRVKGIRKEPGCS 395
+ K + K PG S
Sbjct: 598 IDQKQLVKLPGLS 610
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 145/287 (50%), Gaps = 8/287 (2%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY+K + +A V DEMPER + S +S A ++ G N T
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGD 120
+SVL C + Q+H +K G E +V+V ++L+ +YS+ GE + A +F+++
Sbjct: 135 VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 121 RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQS---TLTSVLRACTGMSLLELGRQ 177
V +N+ I+ ++ + ++ MR+ F +++ T + + AC + L+ GRQ
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRK--FSSEEPNDVTFVNAITACASLLNLQYGRQ 252
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-VKDVISWSTMIAGLAQNG 234
H V+K F + ++ AL+DMY KC + A +F + +++ISW+++I+G+ NG
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM 281
A++LF+ + G +P+ T ++ S G V + + +F M
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 56 PNMFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
PN FTF +L++C L D+ Q +H+ ++K G DVF +AL+ +Y K+ ++ +AL V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
EM N+ ++ ++ +A ++ R +G + T+ SVL C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
E G Q H +K F+ ++ + +L+ MY +CG A +F ++ K V++++ I+GL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 231 AQNGFSLEALKLFDSM-KVMGPRPNYITILGVLFACS 266
+NG +F+ M K PN +T + + AC+
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 1 MYVKFNLLEEAQVVFD--EMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
MY+K L A+ +FD E ++ V W MIS Y + A+++ + E V P++
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 59 FTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSA-----LIDVYSKLGELLEALSVF 113
TF++VL AC + ++++ S I ++ E + S +ID+ + G L EA V
Sbjct: 472 ATFTAVLSACSHCGNVEK-GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVI 530
Query: 114 KEMVTGDRVVWNSIIAAFAQHSD---GDEALYLYKKMRRAGFPADQSTLTSVLRA 165
+M V++S++ + QH D G+EA ++ PA L+S+ A
Sbjct: 531 DQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPEN-PAPFVILSSIYAA 584
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 28/395 (7%)
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLILHNALL 196
+A+ + K R G+ D L + + C L+ + H + D+ +N+++
Sbjct: 164 KAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSII 223
Query: 197 DMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYI 256
+MY CGS+EDA +FN M +++ +W +I A+NG +A+ F K G +P+
Sbjct: 224 EMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGE 283
Query: 257 TILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHE 316
+ FAC G +++G +F SM YGI P EHY ++ +L G LD+ ++ +
Sbjct: 284 MFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES 343
Query: 317 MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA-----EDTGAYVLLSNTYANSK 371
M +P+V W TL++ R H ++ L + +LDA E V + ++
Sbjct: 344 M--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSS----- 396
Query: 372 MWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLT 431
D+ + + KG + I GD S P+ E+ L +
Sbjct: 397 ---DLVKEKLQRMAKG-----------PNYGIRYMAAGDISRPENRELYMALKSLKEHMI 442
Query: 432 GAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHI 491
GYVP + L D++ E ++++L +H+E+ A + + P IRV KNLR+C DCH
Sbjct: 443 EIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHN 502
Query: 492 FAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
KL++K+ R ++ RD R+HH +DGVCSC +YW
Sbjct: 503 ALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 55 MPNMFTFSSVLRACEYLSDIKQIHSSILK-VGLESDVFVRSALIDVYSKLGELLEALSVF 113
+P +F + + + L + K +H I VG+ SD+ +++I++YS G + +AL+VF
Sbjct: 181 LPRLFWIAQLCGDAQALQEAKVVHEFITSSVGI-SDISAYNSIIEMYSGCGSVEDALTVF 239
Query: 114 KEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
M + W +I FA++ G++A+ + + ++ G D + AC + +
Sbjct: 240 NSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMN 299
Query: 174 LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
G +L F+ MY + G ++ + + +++ LA+
Sbjct: 300 EG------LLHFES----------MYKEYG------------IIPCMEHYVSLVKMLAEP 331
Query: 234 GFSLEALKLFDSMK 247
G+ EAL+ +SM+
Sbjct: 332 GYLDEALRFVESME 345
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 207/388 (53%), Gaps = 16/388 (4%)
Query: 15 FDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI 74
F+ +PE++V+SW +++S + ++ L M G P++ F S L C SDI
Sbjct: 272 FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDI 331
Query: 75 ---KQIHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
KQIH +LK+G + S + V+SALID+Y K + + +++ + + NS++ +
Sbjct: 332 QSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTS 391
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE-LGRQAHVHVLK----F 185
+ + ++ M G D+ TL++VL+A + +SL E L VH +
Sbjct: 392 LMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS-LSLPESLHSCTLVHCCAIKSGY 450
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDS 245
D+ + +L+D Y K G E ++ +F+ + ++ +++I G A+NG + +K+
Sbjct: 451 AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLRE 510
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
M M P+ +TIL VL CSH+GLV++G F S+++ YGI PGR+ Y CM+DLLGRAG
Sbjct: 511 MDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAG 570
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSN 365
++ +L+ + D V W +LL +CR HRN + AA+ ++ L+ E+ Y+ +S
Sbjct: 571 LVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSK 630
Query: 366 TYAN------SKMWNDVAEVRRTMRVKG 387
Y S+ ++A R MR G
Sbjct: 631 FYFEIGDFEISRQIREIAASRELMREIG 658
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 14/327 (4%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
+K L A FDEM R+VV++ +IS S + RA++L M+ G+ + TF
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 63 SVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG 119
SVL C + + Q+H ++ +G ++FVRSAL+ +Y+ L + AL +F EM+
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ V N ++ F Q + +Y +M G + T ++R C+ L+ G+Q H
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 180 VHVLKFD---QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
V+K ++ + N L+D Y CG L + FN + KDVISW+++++ A G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH---YFRSMKNLYGIDPGREH 293
L++L LF M+ G RP+ + L CS + G Y M G D H
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM----GFDVSSLH 352
Query: 294 Y-GCMLDLLGRAGKLDDMVKLIHEMNC 319
++D+ G+ +++ L + C
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPC 379
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 42/375 (11%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y L++ A +FDEM +RN+ ++ + + R ++ + M EGV N T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 61 FSSVLRACEY---LSDIKQIHSSILKVGLE-SDVFVRSALIDVYSKLGELLEALSVFKEM 116
+ ++R C + + + KQ+HS ++K G S++FV + L+D YS G+L ++ F +
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + WNSI++ A + ++L L+ KM+ G S L C+ S ++ G+
Sbjct: 276 PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGK 335
Query: 177 QAHVHVLKFDQD---LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQN 233
Q H +VLK D L + +AL+DMY KC +E++ ++ + ++ ++++ L
Sbjct: 336 QIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC 395
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACS-------------HAGLVDDGW----- 275
G + + +++F M G + +T+ VL A S H + G+
Sbjct: 396 GITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVA 455
Query: 276 -------HYFRSMKNLYGIDPGRE----HYGCMLDLL---GRAGKLDDMVKLIHE---MN 318
Y +S +N E + C+ ++ R G D VK++ E MN
Sbjct: 456 VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 319 CKPDVVTWRTLLDAC 333
PD VT ++L C
Sbjct: 516 LIPDEVTILSVLSGC 530
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGD 138
SS L+ V+ + ID K G LL A F EM D V +N +I+ +++
Sbjct: 35 SSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSL 94
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHV--LKFDQDLILHNALL 196
A+ LY +M G ST SVL C+ G Q H V L F ++ + +AL+
Sbjct: 95 RAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALV 154
Query: 197 DMYCKCGSLEDAKF-IFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNY 255
+Y C L D +F+ M+ +++ + ++ Q G S +++ M++ G N
Sbjct: 155 GLY-ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 256 ITILGVLFACSHAGLVDDGWHYFR-------SMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
+T ++ CSH LV +G ++ N++ + ++Y DL G
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS----- 268
Query: 309 DMVKLIHEMNCKP--DVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNT 366
+ N P DV++W +++ C + +V LD+ D
Sbjct: 269 -----MRSFNAVPEKDVISWNSIVSVCADYGSV------------LDSLD---------L 302
Query: 367 YANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFIL 408
++ + W +R M S I+ KQIH ++L
Sbjct: 303 FSKMQFWGKRPSIRPFMSFLNFCSRN--SDIQSGKQIHCYVL 342
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 185/353 (52%), Gaps = 38/353 (10%)
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALY 142
K+G ES V+V++AL+ +Y G +++A VF EM + V WN +I D ++AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 143 LYKKM---------------RRAGFP-----------------ADQSTLTSVLRACTGMS 170
+KM R P ++ T+ ++L A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 171 LLELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV--VKDVISWST 225
L++ H +V K D+ + N+L+D Y KCG ++ A F + K+++SW+T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW-HYFRSMKNL 284
MI+ A +G EA+ +F M+ +G +PN +T++ VL ACSH GL ++ + +F +M N
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATY 344
Y I P +HYGC++D+L R G+L++ K+ E+ + V WR LL AC + + +LA
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 345 AAKEILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWI 397
+++++L+ G YVL+SN + + + D R+ M V+G+ K PG S +
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 8 LEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLR-EGVMPNMFTFSSVLR 66
E+A ++MP R VVSWTT+I Y+ V A+ L M+ + + PN T ++L
Sbjct: 205 FEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILP 264
Query: 67 ACEYLSDIK---QIHSSILKVG-LESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR- 121
A L D+K +H+ + K G + D+ V ++LID Y+K G + A F E+ G +
Sbjct: 265 AVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKN 324
Query: 122 -VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG----R 176
V W ++I+AFA H G EA+ ++K M R G ++ T+ SVL AC+ L E
Sbjct: 325 LVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFF 384
Query: 177 QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD-VISWSTMIAG 229
V+ K D+ + L+DM + G LE+A+ I + +++ + W ++
Sbjct: 385 NTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 2 YVKFNLLEEAQVVFDEMPE--RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
Y K ++ A F E+P +N+VSWTTMISA++ + A+ + M R G+ PN
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRV 361
Query: 60 TFSSVLRACEY--LSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
T SVL AC + L++ ++ ++ + + + DV L+D+ + G L EA +
Sbjct: 362 TMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIAL 421
Query: 115 EMVTGDR-VVWNSIIAAFAQHSDGDEALYLYKKM 147
E+ ++ VVW ++ A + + D + A + +K+
Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 455
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 201/404 (49%), Gaps = 11/404 (2%)
Query: 4 KFNLLEEAQVVFDEMPE-RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-VMPNMFTF 61
K L A + + M E R++ SW ++IS +S + +++ M REG + ++ T
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 62 SSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+ A L + Q H +K E D +++ LI +Y + ++ A+ VF +
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ WN +I+A +Q+ G E L++ ++ ++ T +L A T + G QA
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H H+++ F + + AL+DMY CG LE +F V + +W+++I+ +G
Sbjct: 702 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Query: 237 LEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+A++LF + PN + + +L ACSH+G +D+G Y++ M+ +G+ P EH
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV 821
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE 355
++D+LGRAGKL + + I + W LL AC H + L A+ + +++ +
Sbjct: 822 WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 356 DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEV 399
+ Y+ L+NTY W + +R+ + ++K PG S I+V
Sbjct: 882 NASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 170/346 (49%), Gaps = 31/346 (8%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K L A+ VF M R++VSW T+++ + ++++ M G + T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGL--ESDVFVRSALIDVYSKLGELLEALSVFKE 115
FS V+ AC + ++ + +H ++K G E+ V V +++I +YSK G+ A +VF+E
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLEL 174
+V D + N+I+ FA + +EA + +M+ D +T+ S+ C +S
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 175 GRQAHVHVLKFD---QDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLA 231
GR H + ++ + + L + N+++DMY KCG A+ +F +D++SW++MI+ +
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 232 QNGFSLEALKLFDSM--KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
QNGF+ +A LF + + + + T+L +L +C + D + +S+
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS----DSLIFGKSVH------- 520
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRA 335
C L L G L + M+ D+ +W +++ C +
Sbjct: 521 ------CWLQKL---GDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 21/345 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREG-------- 53
Y + L + +FDE+ E++V+ W +MI+A + A+ L + M+ +G
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 54 -VMPNMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
+ + + + R C L H ++ GL D + +AL+++Y+K L A V
Sbjct: 192 LLAASALSSLHLSRKCSML------HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECV 245
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
F M D V WN+I+ + ++L +K M +G AD T + V+ AC+ + L
Sbjct: 246 FTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEEL 305
Query: 173 ELGRQAHVHVLKFDQDLILH----NALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIA 228
LG H V+K H N+++ MY KCG E A+ +F +V +DVIS + ++
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 229 GLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
G A NG EA + + M+ + +P+ T++ + C +G +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
E ++D+ G+ G L +L+ + D+V+W +++ A
Sbjct: 426 SRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRDLVSWNSMISA 469
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 149/341 (43%), Gaps = 33/341 (9%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K L +A+++F R++VSW +MISA+S +A L ++ E + F+
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFS 496
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVY-SKLGELLEALSVFKEMV-T 118
S+VL +IL SD + + + KLG+L A + M T
Sbjct: 497 LSTVL--------------AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSET 542
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAG-FPADQSTLTSVLRACTGMSLLELGRQ 177
D WNS+I+ A E+L ++ M R G D TL + A + L+ GR
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 178 AHVHVLKF--DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H +K + D L N L+ MY +C +E A +F + ++ SW+ +I+ L+QN
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGW----HYFRSMKNLYGIDPGR 291
E +LF ++K+ PN IT +G+L A + G G H R G
Sbjct: 663 GREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-----GFQANP 714
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA 332
++D+ G L+ +K+ + W +++ A
Sbjct: 715 FVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISA 754
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 39/331 (11%)
Query: 14 VFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSD 73
+FDE+PER +R M+ LR+ VLR+ ++
Sbjct: 71 LFDELPERE-----------------NRTMESSFMFLRD-----------VLRSFMMRTE 102
Query: 74 I---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
+ +H LK GL D+ S L+ Y + GEL+ + +F E+ D +VWNS+I A
Sbjct: 103 TETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITA 162
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLI 190
Q+ A+ L+ +M G D +TL A + + L + + +H L + L+
Sbjct: 163 LNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSR--KCSMLHCLAIETGLV 220
Query: 191 ----LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
L NAL+++Y K +L A+ +F M +D++SW+T++ NG ++L+ F SM
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
G + +T V+ ACS + G + +K+ Y + ++ + + G
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLLDACRAH 336
+ + E+ C+ DV++ +L+ A+
Sbjct: 341 DTEAAETVFEELVCR-DVISSNAILNGFAAN 370
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 204/415 (49%), Gaps = 39/415 (9%)
Query: 41 RAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALI 97
+A+ +LR G +P+ +TF S++ E + K H +K G + + V+++L+
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 98 DVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA-------FAQHSDGDE----------- 139
+Y+ G L A +F E+ D V WNSIIA A H DE
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 140 -------------ALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK-- 184
++ L+++M RAGF ++STL +L AC + L+ GR H +++
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFD 244
+ +++ AL+DMY KC + A+ IF+ + +++ ++W+ MI +G L+LF+
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
+M RP+ +T +GVL C+ AGLV G Y+ M + + I P H CM +L A
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 305 G---KLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYV 361
G + ++ +K + + + P+ W LL + R N L AK +++ D + Y
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH 460
Query: 362 LLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQI 416
LL N Y+ + W DV VR ++ + I + PGC +++ + +H LG K ++
Sbjct: 461 LLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAEKV 515
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
A +FDEMP++N++SW MISAY ++ L M+R G N T +L AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 71 LSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSI 127
+ +K+ +H+S+++ L S V + +ALID+Y K E+ A +F + ++V WN +
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ 187
I A H + L L++ M D+ T VL C L+ G+ + L D+
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQS--YYSLMVDE 380
Query: 188 DLILHN-----ALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
I N + ++Y G E+A+ + +DV ST A L
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANL 428
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
++ + Q+H+ ++ G D L+ S+ G+ +S+++ + G N + A
Sbjct: 35 ITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKA 92
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF--DQD 188
+ S +AL Y + R GF D T S++ ++ G+ H +K DQ
Sbjct: 93 YLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQV 152
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
L + N+L+ MY CG+L+ AK +F + +D++SW+++IAG+ +NG L A KLFD M
Sbjct: 153 LPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM-- 210
Query: 249 MGPRPNYIT 257
P N I+
Sbjct: 211 --PDKNIIS 217
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 38/356 (10%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFML-REGVMPNMFTFSS 63
F + A +VF+++ + +W MI + S A+ L + M+ + FTF
Sbjct: 65 FGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPF 124
Query: 64 VLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLG---------------- 104
V++AC S I+ Q+H +K G +DVF ++ L+D+Y K G
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 105 ---------------ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRR 149
+L A VF +M + V W ++I A+ ++ DEA L+++M+
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 150 AGFPADQSTLTSVLRACTGMSLLELGRQAH--VHVLKFDQDLILHNALLDMYCKCGSLED 207
++ T+ ++L+A T + L +GR H H F D L AL+DMY KCGSL+D
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQD 304
Query: 208 AKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACS 266
A+ +F+ M K + +W++MI L +G EAL LF+ M+ P+ IT +GVL AC+
Sbjct: 305 ARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 267 HAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
+ G V DG YF M +YGI P REH CM+ LL +A +++ L+ M+ PD
Sbjct: 365 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 144/317 (45%), Gaps = 52/317 (16%)
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR 121
S LR C S +KQIH+ I+K L +D + LI V S GE A VF ++ +
Sbjct: 24 SYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 122 VVWNSIIAAFAQHSDGDEALYLYKKM---RRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
WN +I + + + EAL L+ M ++ F D+ T V++AC S + LG Q
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLASSSIRLGTQV 141
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCG-------------------------------SL 205
H +K F D+ N L+D+Y KCG L
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 206 EDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
+ A+ +FN+M +++V+SW+ MI +N EA +LF M+V +PN TI+ +L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 266 SHAGLVDDG-WHYFRSMKNLYGIDPGREHYGCML-----DLLGRAGKLDDMVKLIHEMNC 319
+ G + G W + + KN + +D C L D+ + G L D K+ M
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLD-------CFLGTALIDMYSKCGSLQDARKVFDVMQG 314
Query: 320 KPDVVTWRTLLDACRAH 336
K + TW +++ + H
Sbjct: 315 K-SLATWNSMITSLGVH 330
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 158/272 (58%), Gaps = 5/272 (1%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y + L A FD M E++V+SWT +ISA S +A+ + + ML +PN FT
Sbjct: 228 YAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV 287
Query: 62 SSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
S+L+AC + L +Q+HS ++K +++DVFV ++L+D+Y+K GE+ + VF M
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V W SIIAA A+ G+EA+ L++ M+R A+ T+ S+LRAC + L LG++
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H ++K ++++ + + L+ +YCKCG DA + ++ +DV+SW+ MI+G + G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHA 268
EAL M G PN T L AC+++
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 180/340 (52%), Gaps = 11/340 (3%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV-MPNMFTF 61
V+ L A+ VFD MPE+N V+WT MI Y L D A L ++ G+ N F
Sbjct: 128 VRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMF 187
Query: 62 SSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+L C ++ +Q+H +++KVG+ ++ V S+L+ Y++ GEL AL F M
Sbjct: 188 VCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D + W ++I+A ++ G +A+ ++ M F ++ T+ S+L+AC+ L GRQ
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 179 HVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS 236
H V+K D+ + +L+DMY KCG + D + +F+ M ++ ++W+++IA A+ GF
Sbjct: 307 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366
Query: 237 LEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYG 295
EA+ LF MK N +T++ +L AC G + G + + +KN I+
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN--SIEKNVYIGS 424
Query: 296 CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRA 335
++ L + G+ D ++ ++ + DVV+W ++ C +
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSS 463
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 147/273 (53%), Gaps = 11/273 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY K + + + VFD M RN V+WT++I+A++ + A+ L M R ++ N T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 61 FSSVLRACEYLSDI---KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+LRAC + + K++H+ I+K +E +V++ S L+ +Y K GE +A +V +++
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ D V W ++I+ + EAL K+M + G + T +S L+AC L +GR
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 178 AHV-----HVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
H H L ++ + +AL+ MY KCG + +A +F+ M K+++SW MI G A+
Sbjct: 508 IHSIAKKNHAL---SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 564
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFAC 265
NGF EALKL M+ G + +L C
Sbjct: 565 NGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K +A V ++P R+VVSWT MIS SS+ A+ L M++EGV PN FT
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 61 FSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
+SS L+AC E L + IHS K S+VFV SALI +Y+K G + EA VF M
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ V W ++I +A++ EAL L +M GF D ++L C + L E
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
IK+IH+ LK + ++ + LI +LG+L+ A VF M + V W ++I + +
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 134 HSDGDEALYLYKKMRRAGFP-ADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD-QDLIL 191
+ DEA L++ + G ++ +L C+ + ELGRQ H +++K +LI+
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIV 220
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
++L+ Y +CG L A F+ M KDVISW+ +I+ ++ G ++A+ +F M
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 252 RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY---GIDPGREHYGCMLDLLGRAGKLD 308
PN T+ +L ACS + + R + +L I ++D+ + G++
Sbjct: 281 LPNEFTVCSILKACSE----EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 309 DMVKLIHEMNCKPDVVTWRTLLDA 332
D K+ M+ + + VTW +++ A
Sbjct: 337 DCRKVFDGMSNR-NTVTWTSIIAA 359
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 167/318 (52%), Gaps = 5/318 (1%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
+Y K + + VF +RN +SWT ++S Y++ D+A++ +V+M +EG P++ T
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 61 FSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
++VL C L IKQ IH LK +V + ++L+ +YSK G + +F +
Sbjct: 421 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 480
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ 177
+ W ++I + ++ D + +++ M + D T+ VL C+ + L+LG++
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 540
Query: 178 AHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
H H+LK F+ + ++ MY KCG L A F F+ + VK ++W+ +I N
Sbjct: 541 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 600
Query: 236 SLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYG 295
+A+ F+ M G PN T VL CS AG VD+ + +F M +Y + P EHY
Sbjct: 601 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYS 660
Query: 296 CMLDLLGRAGKLDDMVKL 313
+++LL R G++++ +L
Sbjct: 661 LVIELLNRCGRVEEAQRL 678
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 177/342 (51%), Gaps = 15/342 (4%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMI--SAYSSVKLNDRAMKLLVFMLREGVMPNM 58
MY +++AQ VFDE NV SW ++ + S K + M GV N+
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 59 FTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
++ S+V ++ S ++Q H+ +K GL + VF++++L+D+Y K G++ A VF E
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 116 MVTGDRVVWNSIIAAFAQHSDGDEALYLYKKM--RRAGFPADQSTLTSVLRACTGMSLLE 173
+V D VVW ++IA A + EAL L++ M +P + LT++L + L+
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP-NSVILTTILPVLGDVKALK 333
Query: 174 LGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGL 230
LG++ H HVLK + + +H+ L+D+YCKCG + + +F ++ ISW+ +++G
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDP 289
A NG +AL+ M+ G RP+ +TI VL C+ + G + ++KNL+ P
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LP 451
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLD 331
++ + + G + ++L + + +V W ++D
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMID 492
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 62/363 (17%)
Query: 42 AMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALID 98
A+ +L ++ + G+ N TFS++L AC + L KQ+H I GLES+ F+R+ L+
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 99 VYSKLGELLEALSVFKEMVTGDRVVWNSII--AAFAQHSDGDEALYLYKKMRRAGFPADQ 156
+Y+ G + +A VF E + + WN+++ + + L + +MR G +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNR 214
+L++V ++ G S L G + H +K + L +L+DMY KCG + A+ +F+
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 215 MVVKDVISWSTMIAGLAQNGFSLEALKLFDSM----KVMGPRPNYI---TILGVLFACS- 266
+V +D++ W MIAGLA N EAL LF +M K+ PN + TIL VL
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIY---PNSVILTTILPVLGDVKA 331
Query: 267 -----------------------HAGLVD---------DGWHYFRSMKNLYGIDPGREHY 294
H+GL+D G F K I +
Sbjct: 332 LKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS-----W 386
Query: 295 GCMLDLLGRAGKLDDMVKLI---HEMNCKPDVVTWRTLLDACRAHRNV----DLATYAAK 347
++ G+ D ++ I + +PDVVT T+L C R + ++ YA K
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 348 EIL 350
+
Sbjct: 447 NLF 449
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 128 IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KF 185
I FA+ ++ + AL + + + G P + +T +++L AC L G+Q HVH+
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFS--LEALKLF 243
+ + L L+ MY CGS++DA+ +F+ +V SW+ ++ G +G + L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWH-YFRSMKNLYGIDPGREHYGCMLDLLG 302
M+ +G N ++ V + + A + G + ++KN G+ ++D+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN--GLFNSVFLKTSLVDMYF 260
Query: 303 RAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
+ GK+ ++ E+ + D+V W ++
Sbjct: 261 KCGKVGLARRVFDEI-VERDIVVWGAMI 287
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 199/446 (44%), Gaps = 42/446 (9%)
Query: 105 ELLEALSVFKEMVTGDRVVWNSIIAAF--------AQH------------SDGDEALYLY 144
E+ E ++ +K V G + NS++ + AQ+ + EA+ +
Sbjct: 48 EITEMINRYKRNVAGHTLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVL 107
Query: 145 KKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQ--DLILHNALLDMYCKC 202
+ G+ D L + + C LE R H ++ D+ NA+++MY C
Sbjct: 108 DYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGC 167
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
S++DA +F M + + M+ NG+ EA+ LF K G +PN V
Sbjct: 168 CSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVF 227
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPD 322
C+ G V +G F++M YGI P EHY + +L +G LD+ + + M +P
Sbjct: 228 STCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPS 287
Query: 323 VVTWRTLLDACRAHRNVDLATYAAKEILKLDAE--DTGAYVLLSNTYANSKMWNDVAEVR 380
V W TL++ R H +V+L A+ + KLDA D + L T A+
Sbjct: 288 VDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGLVATKASD---------- 337
Query: 381 RTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTN 440
++KEP S F D SHPQ++ I L S+L GYVPDT
Sbjct: 338 ------FVKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTR 389
Query: 441 FVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLE 500
+ + + ++ + + E++A+V ++ I + N+RI GDCH KL++ +
Sbjct: 390 YYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVIT 449
Query: 501 QRHIVIRDPIRYHHFRDGVCSCGDYW 526
R ++ RD YH F++GVC C + W
Sbjct: 450 GRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 42 AMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALID 98
A+++L ++ +G ++ + + C E L + +H I+ + DV R+A+I+
Sbjct: 103 AVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIE 162
Query: 99 VYSKLGELLEALSVFKEMVTGDRVVWNS-----IIAAFAQHSDGDEALYLYKKMRRAGFP 153
+YS + +AL VF+EM WNS ++ F + G+EA+ L+ + + G
Sbjct: 163 MYSGCCSVDDALKVFEEMPE-----WNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 154 ADQSTLTSVLRACTGMSLLELGR---QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKF 210
+ V CT ++ G QA + ++++ M G L++A
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 211 IFNRMVVKDVIS-WSTMI 227
RM ++ + W T++
Sbjct: 278 FVERMPMEPSVDVWETLM 295
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 199/421 (47%), Gaps = 21/421 (4%)
Query: 110 LSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
+S + +MV + V A + EAL + + G+ D L + + C +
Sbjct: 66 VSSYAQMVNNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEV 125
Query: 170 SLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAG 229
LE R H + D ++ +++MY C S +DA +FN M ++ +W TMI
Sbjct: 126 EALEEARVVHDCITPLDARS--YHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
LA+NG A+ +F G +P+ V FAC G +++G +F SM YG+
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVL 243
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
E Y ++++L G LD+ + + M +P V W TL++ C ++L A+ I
Sbjct: 244 SMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELI 303
Query: 350 LKLDA----EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHA 405
KLDA +++ A ++ + A+ + E+R + IR +P K++H
Sbjct: 304 KKLDASRMSKESNAGLVAAK--ASDSAMEKLKELR---YCQMIRDDP-------KKRMHE 351
Query: 406 FILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIV 465
F GD SH R L ++ G+VP T +E E++E+ L S KLA
Sbjct: 352 FRAGDTSHLGTVSAFRSLK---VQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFA 408
Query: 466 FGIMSFPKEKTIRVWKNLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDY 525
I++ + + V +N+R C D H K+I+ + R ++ RD +YH +++GVCSC DY
Sbjct: 409 HAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDY 468
Query: 526 W 526
W
Sbjct: 469 W 469
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 99/226 (43%), Gaps = 24/226 (10%)
Query: 21 RNVVSWTTMISAYSSVKLND-----------RAMKLLVFMLREGVM---PNMFTFSSVLR 66
R V S+ M++ + SV + A++++ + +G + P + + +
Sbjct: 64 RRVSSYAQMVNNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCG 123
Query: 67 ACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNS 126
E L + + +H I + D +I++YS +AL+VF EM + W +
Sbjct: 124 EVEALEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGT 179
Query: 127 IIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD 186
+I A++ +G+ A+ ++ + G D+ +V AC + + G H + D
Sbjct: 180 MIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRD 238
Query: 187 QDLIL----HNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTMI 227
++L + +++M CG L++A RM V+ + W T++
Sbjct: 239 YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY ++A VF+EMP+RN +W TMI + +RA+ + + EG P+
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 61 FSSVLRACEYLSDIKQ----IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
F +V AC + DI + S G+ + +I++ + G L EAL + M
Sbjct: 212 FKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
Query: 117 VTGDRV-VWNSII 128
V +W +++
Sbjct: 272 TVEPSVEMWETLM 284
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 46/339 (13%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
+ K LE A+ FD MPE++VVSW M+S Y+ + A++L MLR GV PN T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 62 SSVLRACEYLSDIKQIHSSILKVGLESDV----FVRSALIDV------------------ 99
V+ AC + +D + S++K+ E V FV++AL+D+
Sbjct: 268 VIVISACSFRAD-PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG 326
Query: 100 --------------YSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYK 145
Y+++G++ A +F M + V WNS+IA +A + A+ ++
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 146 KMRRAG-FPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDL--ILHNALLDMYCKC 202
M G D+ T+ SVL AC M+ LELG ++ K L + +L+ MY +
Sbjct: 387 DMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARG 446
Query: 203 GSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
G+L +AK +F+ M +DV+S++T+ A NG +E L L MK G P+ +T VL
Sbjct: 447 GNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
AC+ AGL+ +G F+S++N P +HY CM DLL
Sbjct: 507 TACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 149/325 (45%), Gaps = 50/325 (15%)
Query: 11 AQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEY 70
+++FD + NV +M +S + + + ++L R G+MP+ F+F V+++
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAA 130
+ Q + + K+G D +VR+ ++D+Y K + A VF ++ WN +I+
Sbjct: 119 FGILFQ--ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLI 190
+ + + +EA L+ M + D++
Sbjct: 177 YWKWGNKEEACKLFDMMP-------------------------------------ENDVV 199
Query: 191 LHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG 250
++ + K LE+A+ F+RM K V+SW+ M++G AQNGF+ +AL+LF+ M +G
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 251 PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGC-----MLDLLGRAG 305
RPN T + V+ ACS RS+ L ID R C +LD+ +
Sbjct: 260 VRPNETTWVIVISACSFRA----DPSLTRSLVKL--IDEKRVRLNCFVKTALLDMHAKCR 313
Query: 306 KLDDMVKLIHEMNCKPDVVTWRTLL 330
+ ++ +E+ + ++VTW ++
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMI 338
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFT 60
MY + L EA+ VFDEM ER+VVS+ T+ +A+++ + LL M EG+ P+ T
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 61 FSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYS 101
++SVL AC + +LK G +R+ L D Y+
Sbjct: 502 YTSVLTACN--------RAGLLKEGQRIFKSIRNPLADHYA 534
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 77/105 (73%)
Query: 422 QLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKLAIVFGIMSFPKEKTIRVWK 481
+L + AGYVP+T +VL D++ E +E +L HHSE+LAI FGI++ P TIRV K
Sbjct: 135 KLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMK 194
Query: 482 NLRICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFRDGVCSCGDYW 526
NLRICGDCH F K+++ +E R I++RD R+HHFRDG CSCGDYW
Sbjct: 195 NLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 169/366 (46%), Gaps = 32/366 (8%)
Query: 10 EAQVVFDEMPE----RNVVSWTTMISAYSSVKLN-DRAMKLLVFMLREGVMPNMFTFSSV 64
EA VF +M E ++++ +++ + + ++ L+ M +G+ P+ +T++++
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 65 LRACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV---- 117
+ C+ S + Q+ + G D +AL+DVY K EA+ V EMV
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL-------RACTGMS 170
+ V +NS+I+A+A+ DEA+ L +M G D T T++L + + MS
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 171 LLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTM 226
+ E R A ++ NA + MY G + IF+ + V D+++W+T+
Sbjct: 406 IFEEMRNAGCK-----PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
+A QNG E +F MK G P T ++ A S G + +R M + G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-G 519
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRAHRNVDLAT 343
+ P Y +L L R G + K++ EM CKP+ +T+ +LL A + + L
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 344 YAAKEI 349
A+E+
Sbjct: 580 SLAEEV 585
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 15/274 (5%)
Query: 71 LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNS 126
+S + + + + G DV+ ++LI ++ G EA++VFK+M + +N
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 127 IIAAFAQHSDG-DEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA--HVHVL 183
I+ F + ++ L +KM+ G D T +++ C SL + Q +
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA 308
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEA 239
F D + +NALLD+Y K ++A + N MV+ +++++++I+ A++G EA
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
++L + M G +P+ T +L AG V+ F M+N G P + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIK 427
Query: 300 LLGRAGKLDDMVKLIHEMNC---KPDVVTWRTLL 330
+ G GK +M+K+ E+N PD+VTW TLL
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 181/442 (40%), Gaps = 88/442 (19%)
Query: 1 MYVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
+Y K + +EA V +EM ++V++ ++ISAY+ + D AM+L M +G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 57 NMFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
++FT++++L E ++ I + G + ++ +A I +Y G+ E + +F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 114 KEM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
E+ ++ D V WN+++A F Q+ E ++K+M+RAGF ++ T
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF---------- 492
Query: 170 SLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWST 225
N L+ Y +CGS E A ++ RM V D+ +++T
Sbjct: 493 -----------------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFA--------------------- 264
++A LA+ G ++ K+ M+ +PN +T +L A
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 265 --------------CSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR---AGKL 307
CS L+ + F +K G P M+ + GR K
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 308 DDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL-KLDAEDTGAYVLLSNT 366
+ ++ + E P + T+ +L+ + + +EIL K D +Y +
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 367 YANSKMWNDVAEVRRTMRVKGI 388
Y + D + + MR GI
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGI 730
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 63/336 (18%)
Query: 10 EAQVVFDEM------PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
E VF EM PER ++ T+ISAYS ++AM + ML GV P++ T+++
Sbjct: 472 EVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 64 VLRA-----------------------------CEYL------SDIKQIHS---SILKVG 85
VL A C L +I +HS +
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 86 LESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQHSDGDEAL 141
+E + L+ V SK L EA F E+ + D NS+++ + + +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 142 YLYKKMRRAGFPADQSTLTSVL----RACTGMSLLELGRQAHVHVLKFDQDLILHNALLD 197
+ M+ GF +T S++ R+ E+ R+ +K D+I +N ++
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK--PDIISYNTVIY 707
Query: 198 MYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRP 253
YC+ + DA IF+ M +V DVI+++T I A + EA+ + M G RP
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 254 NYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
N T ++ D+ + ++NL DP
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL---DP 800
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 195 LLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG 250
++ M K G + A +FN + DV S++++I+ A +G EA+ +F M+ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 251 PRPNYIT---ILGVLFACSHAGLVDDGWHYFRSMKNLY---GIDPGREHYGCMLDLLGRA 304
+P IT IL V G + W+ S+ GI P Y ++ R
Sbjct: 239 CKPTLITYNVILNVF------GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 305 GKLDDMVKLIHEMNCKP---DVVTWRTLLDA-CRAHRNVDLATYAAKEILKLDAEDTGAY 360
+ ++ EM D VT+ LLD ++HR + + +L + Y
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 361 VLLSNTYANSKMWNDVAEVRRTMRVKGIRKE 391
L + YA M ++ E++ M KG + +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 169/345 (48%), Gaps = 19/345 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL----RACEYLSDIKQI 77
+V+S++T+++ Y D+ KL+ M R+G+ PN + + S++ R C+ L++ ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEA 338
Query: 78 HSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQ 133
S +++ G+ D V + LID + K G++ A F EM +T D + + +II+ F Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLIL 191
D EA L+ +M G D T T ++ ++ + H H+++ +++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 192 HNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+ L+D CK G L+ A + + M + ++ ++++++ GL ++G EA+KL +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
G + +T ++ A +G +D + M G+ P + +++ G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGML 577
Query: 308 DDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLATYAAKEI 349
+D KL++ M K P+ T+ +L+ N+ AT K++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 175/408 (42%), Gaps = 56/408 (13%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLND---RAMKLLVFMLRE----GVM 55
V F LL EA+ VF++M +V + Y + D A ++VF RE GV
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF--REFPEVGVC 243
Query: 56 PNMFTFSSVLRACEYLSDIKQIHSSILKV---GLESDVFVRSALIDVYSKLGELLEALSV 112
N+ +++ V+ L IK+ H +L + G DV S +++ Y + GEL
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL------ 297
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
D+ L + M+R G + S++ + L
Sbjct: 298 -------------------------DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDA-KFIF---NRMVVKDVISWSTM 226
+A +++ D +++ L+D +CK G + A KF + +R + DV++++ +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I+G Q G +EA KLF M G P+ +T ++ AG + D + M G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-G 451
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLAT 343
P Y ++D L + G LD +L+HEM +P++ T+ ++++ N++ A
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 344 YAAKEI--LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
E L+A DT Y L + Y S + E+ + M KG++
Sbjct: 512 KLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQ---IH 78
NVV++TT+I D A +LL M + G+ PN+FT++S++ +I++ +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV----TGDRVVWNSIIAAFAQH 134
GL +D + L+D Y K GE+ +A + KEM+ V +N ++ F H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
++ L M G + +T S+++ + L+ + + D +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
L+ +CK ++++A F+F M K V ++S +I G + LEA ++FD M+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 249 MG 250
G
Sbjct: 695 EG 696
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 169/345 (48%), Gaps = 19/345 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL----RACEYLSDIKQI 77
+V+S++T+++ Y D+ KL+ M R+G+ PN + + S++ R C+ L++ ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEA 338
Query: 78 HSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQ 133
S +++ G+ D V + LID + K G++ A F EM +T D + + +II+ F Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLIL 191
D EA L+ +M G D T T ++ ++ + H H+++ +++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 192 HNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+ L+D CK G L+ A + + M + ++ ++++++ GL ++G EA+KL +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
G + +T ++ A +G +D + M G+ P + +++ G L
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGML 577
Query: 308 DDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLATYAAKEI 349
+D KL++ M K P+ T+ +L+ N+ AT K++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 175/408 (42%), Gaps = 56/408 (13%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLND---RAMKLLVFMLRE----GVM 55
V F LL EA+ VF++M +V + Y + D A ++VF RE GV
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF--REFPEVGVC 243
Query: 56 PNMFTFSSVLRACEYLSDIKQIHSSILKV---GLESDVFVRSALIDVYSKLGELLEALSV 112
N+ +++ V+ L IK+ H +L + G DV S +++ Y + GEL
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL------ 297
Query: 113 FKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
D+ L + M+R G + S++ + L
Sbjct: 298 -------------------------DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDA-KFIF---NRMVVKDVISWSTM 226
+A +++ D +++ L+D +CK G + A KF + +R + DV++++ +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I+G Q G +EA KLF M G P+ +T ++ AG + D + M G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-G 451
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLAT 343
P Y ++D L + G LD +L+HEM +P++ T+ ++++ N++ A
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 344 YAAKEI--LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIR 389
E L+A DT Y L + Y S + E+ + M KG++
Sbjct: 512 KLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQ---IH 78
NVV++TT+I D A +LL M + G+ PN+FT++S++ +I++ +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV----TGDRVVWNSIIAAFAQH 134
GL +D + L+D Y K GE+ +A + KEM+ V +N ++ F H
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
++ L M G + +T S+++ + L+ + + D +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
L+ +CK ++++A F+F M K V ++S +I G + LEA ++FD M+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 249 MG 250
G
Sbjct: 695 EG 696
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 171/345 (49%), Gaps = 25/345 (7%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E VV + T+I A + K + A+ L M +G+ PN+ T++S++R C Y SD +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAFA 132
+ S +++ + +V SALID + K G+L+EA ++ EM+ D ++S+I F
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 133 QHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSL---LELGRQAHVHVLKFDQD 188
H DEA ++++ M + FP + T + C + +EL R+ L +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV--GN 430
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKLFD 244
+ + L+ + + ++A+ +F +MV + D++++S ++ GL NG AL +F+
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
++ P+ T ++ AG V+DGW F S+ +L G+ P Y M+ R
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRK 549
Query: 305 GKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAH-RNVDLATYA 345
G ++ L EM + PD T+ TL+ RAH R+ D A A
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLI---RAHLRDGDKAASA 591
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 166/357 (46%), Gaps = 34/357 (9%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L++A +F +M P ++V ++ ++SA + + D + L M G+ N++T+ S
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY-S 120
Query: 64 VLRAC----EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV-- 117
+L C LS + + ++K+G E D+ ++L++ + + +A+S+ +MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 118 --TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT-------G 168
D +N++I +H+ EA+ L +M G D T V+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 169 MSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIF----NRMVVKDVISWS 224
+SLL+ Q K + ++++N ++D C ++ DA +F N+ + +V++++
Sbjct: 241 LSLLKKMEQG-----KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 225 TMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL 284
++I L G +A +L M PN +T ++ A G + + + M
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK- 354
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDA-CRAHR 337
IDP Y +++ +LD+ M +L+ +C P+VVT+ TL+ C+A R
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 46/267 (17%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+VK L EA+ ++DEM +R ++ +++++I+ + D A + M+ + PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
+ T++++++ F ++ +D E + +F+EM
Sbjct: 396 VVTYNTLIKG-----------------------FCKAKRVD---------EGMELFREMS 423
Query: 117 ---VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ G+ V + ++I F Q + D A ++K+M G D T + +L +E
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 174 LGRQA--HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMI 227
++ K + D+ +N +++ CK G +ED +F + +K +V++++TM+
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPN 254
+G + G EA LF MK GP P+
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPD 570
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 119/239 (49%), Gaps = 14/239 (5%)
Query: 105 ELLEALSVFKEMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLT 160
+L +A+++F +MV V ++ +++A A+ + D + L ++M+ G + T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 161 SVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-- 216
++ S L L ++K ++ D++ N+LL+ +C + DA + +MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 217 --VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
D +++T+I GL ++ + EA+ L D M V G +P+ +T V+ G +D
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLL 330
+ M+ I+PG Y ++D L ++D + L EM+ K P+VVT+ +L+
Sbjct: 241 LSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 19/325 (5%)
Query: 2 YVKFNLLEEAQVVFDEMPE----RNVVSWTTMISAYSSVKLN-DRAMKLLVFMLREGVMP 56
Y + L EEA VF+ M E N+V++ +I A + + K M R GV P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 57 NMFTFSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
+ TF+S+L C + + + +E DVF + L+D K G++ A +
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 114 KEM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT-- 167
+M + + V ++++I FA+ DEAL L+ +MR G D+ + ++L T
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 168 GMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISW 223
G S L + + +D++ +NALL Y K G ++ K +F M V+ +++++
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 224 STMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKN 283
ST+I G ++ G EA+++F K G R + + ++ A GLV M
Sbjct: 518 STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLD 308
GI P Y ++D GR+ +D
Sbjct: 578 -EGISPNVVTYNSIIDAFGRSATMD 601
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAA 130
K+I + G + V+ SALI Y + G EA+SVF M + + V +N++I A
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 131 FAQHS-DGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL--KFDQ 187
+ + + + +M+R G D+ T S+L C+ L E R + + +Q
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLF 243
D+ +N LLD CK G ++ A I +M VK +V+S+ST+I G A+ G EAL LF
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 244 DSMKVMG---PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
M+ +G R +Y T+L + + G ++ R M ++ GI Y +L
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIY---TKVGRSEEALDILREMASV-GIKKDVVTYNALLGG 488
Query: 301 LGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDA 332
G+ GK D++ K+ EM + P+++T+ TL+D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 55/318 (17%)
Query: 1 MYVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
+Y K EEA + EM +++VV++ ++ Y D K+ M RE V+P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 57 NMFTFSSVLRACE---YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVF 113
N+ T+S+++ + +I GL +DV + SALID K G + A+S+
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 114 KEM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
EM ++ + V +NSII AF + + D + P S L S L G
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG---GSLPFSSSAL-SALTETEGN 628
Query: 170 SLLELGRQ---------------------------AHVHVLKFDQDLILHNALLDMYCKC 202
+++L Q +H L+ +++ +A+L+ +C
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 203 GSLEDAKFIFNRMVVKDVISWST---MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITIL 259
S EDA + + + D + ++ G +N + L+A LFD + M
Sbjct: 689 NSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVW-LQAQSLFDKVNEMD--------- 738
Query: 260 GVLFACSHAGLVDDGWHY 277
G + + L D WH+
Sbjct: 739 GSTASAFYNALTDMLWHF 756
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 191 LHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKLFDSM 246
L +A++ + G + AK IF V ++S +I+ ++G EA+ +F+SM
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGK 306
K G RPN +T V+ AC G+ F G+ P R + +L + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 307 LDDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLA-TYAAKEILKLDAEDTGAYVL 362
+ L EM + DV ++ TLLDA +DLA A+ +K + +Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGI 388
+ + +A + +++ + MR GI
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 165/331 (49%), Gaps = 21/331 (6%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E +VV +TT+I A + K + A+ L M +G+ PN+ T++S++R C Y SD +
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAFA 132
+ S +++ + +V SALID + K G+L+EA ++ EM+ D ++S+I F
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 133 QHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSL---LELGRQAHVHVLKFDQD 188
H DEA ++++ M + FP + T + C + +EL R+ L +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GN 429
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKLFD 244
+ +N L+ + G + A+ IF +MV D+I++S ++ GL + G +AL +F+
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
++ P+ T ++ AG V+DGW F S+ +L G+ P Y M+ R
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRK 548
Query: 305 GKLDDMVKLIHEM---NCKPDVVTWRTLLDA 332
G ++ L EM P+ T+ TL+ A
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 160/338 (47%), Gaps = 35/338 (10%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL-------RACEYLS 72
E ++V+ +++++ Y K A+ L+ M PN TF++++ +A E ++
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSII 128
I ++ + G + D+F +++ K G++ ALS+ K+M G D V++ +II
Sbjct: 207 LIDRMVAR----GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL----- 183
A + + ++AL L+ +M G + T S++R L GR + L
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC-----LCNYGRWSDASRLLSDMI 317
Query: 184 --KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSL 237
K + +++ +AL+D + K G L +A+ +++ M+ + D+ ++S++I G +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
EA +F+ M PN +T ++ A V++G FR M G+ Y +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTL 436
Query: 298 LDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA 332
+ L +AG D K+ +M PD++T+ LLD
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 164/354 (46%), Gaps = 22/354 (6%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
+ EA + D+M + N V++ T+I A+ L+ M+ G P++FT+ +
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 64 VLRACEYLSDIKQIHSSILKV---GLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
V+ DI S + K+ +E+DV + + +ID + +AL++F EM
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ + V +NS+I + +A L M + T ++++ A L
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD----VISWSTMIAGL 230
+ + ++K D D+ +++L++ +C L++AK +F M+ KD V++++T+I G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
+ E ++LF M G N +T ++ AG D F+ M + G+ P
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPD 464
Query: 291 REHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDA-CRAHRNVD 340
Y +LD L + GKL+ + + + + +PD+ T+ +++ C+A + D
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 46/267 (17%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+VK L EA+ ++DEM +R ++ +++++I+ + D A + M+ + PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
+ T++++++ + K + E + +F+EM
Sbjct: 395 VVTYNTLIKG--------------------------------FCKAKRVEEGMELFREMS 422
Query: 117 ---VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ G+ V +N++I Q D D A ++KKM G P D T + +L LE
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 174 --LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMI 227
L ++ K + D+ +N +++ CK G +ED +F + +K +VI ++TMI
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPN 254
+G + G EA LF MK G PN
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPN 569
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 138 DEALYLYKKMRRAGFPADQSTLTSVLRACTGMS----LLELGRQAHVHVLKFDQDLILHN 193
D+A+ L+ +M ++ +L A M+ ++ LG + + L+ DL +N
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER--MQNLRISYDLYSYN 119
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKLFDSMKVM 249
L++ +C+ L A + +M+ D+++ S+++ G EA+ L D M VM
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 250 GPRPNYIT----ILGVLF---ACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
+PN +T I G+ A L+D R + G P YG +++ L
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALID------RMVAR--GCQPDLFTYGTVVNGLC 231
Query: 303 RAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLA 342
+ G +D + L+ +M + DVV + T++DA ++NV+ A
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 177/355 (49%), Gaps = 35/355 (9%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E +VV ++T+I + + D A+ L M +G+ P++FT+SS++ C Y SD +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAFA 132
+ S +L+ + +V ++LID ++K G+L+EA +F EM+ + V +NS+I F
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVL-------RACTGMSLL-ELGRQAHVHVLK 184
H DEA ++ M D T +++ + GM L ++ R+ V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV---- 412
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEAL 240
+ + + L+ + + ++A+ +F +MV ++++++T++ GL +NG +A+
Sbjct: 413 --GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 241 KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL 300
+F+ ++ P+ T + AG V+DGW F S+ +L G+ P Y M+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISG 529
Query: 301 LGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAH-RNVDLATYAAKEILK 351
+ G ++ L +M PD T+ TL+ RAH R+ D A A+ E++K
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI---RAHLRDGDKA--ASAELIK 579
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 133/262 (50%), Gaps = 17/262 (6%)
Query: 10 EAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
+A + +M ER NVV++ ++I A++ A KL M++ + PN+ T++S++
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 66 RA-C--EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VT 118
C + L + +QI + ++ DV + LI+ + K ++++ + +F++M +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
G+ V + ++I F Q SD D A ++K+M G + T ++L LE
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 179 --HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQ 232
++ K + D+ +N + + CK G +ED +F + +K DVI+++TMI+G +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 233 NGFSLEALKLFDSMKVMGPRPN 254
G EA LF MK GP P+
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPD 554
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 167/354 (47%), Gaps = 22/354 (6%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L+EA +F EM P ++V ++ ++SA + +K D + M GV N++T++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 64 VLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV--- 117
++ LS I ++K+G + ++L++ + + EA+++ +MV
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLLEL 174
D V + +++ QH+ EA+ L ++M G D T +V+ G L L
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 175 GRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIF----NRMVVKDVISWSTMIAGL 230
+ K + D+++++ ++D CK ++DA +F N+ + DV ++S++I+ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
G +A +L M PN +T ++ A + G + + F M IDP
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPN 344
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA-CRAHRNVD 340
Y +++ +LD+ ++ M +C PDVVT+ TL++ C+A + VD
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 31/322 (9%)
Query: 51 REGVMPNMFTFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELL 107
++G P+ +TF++++ +K +I +L+ G + DV+ +++I KLGE+
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 108 EALSVFKEMVTGD----RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
EA+ V +M+T D V +N++I+ + + +EA L + + G D T S++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 164 RACTGMSLLELGRQAHVHVLKFDQ--------DLILHNALLDMYCKCGSLEDAKFIFNRM 215
+ L L R V + F++ D +N L+D C G L++A + +M
Sbjct: 408 QG------LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 216 ----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLV 271
+ VI+++T+I G + + EA ++FD M+V G N +T ++ + V
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 272 DDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG---KLDDMVKLIHEMNCKPDVVTWRT 328
+D M + G P + Y +L R G K D+V+ + C+PD+VT+ T
Sbjct: 522 EDAAQLMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 329 LLDA-CRAHRNVDLATYAAKEI 349
L+ C+A R V++A+ + I
Sbjct: 581 LISGLCKAGR-VEVASKLLRSI 601
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 150/343 (43%), Gaps = 53/343 (15%)
Query: 4 KFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
K ++EA V D+M R N V++ T+IS + A +L + +G++P++
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF+S+++ + + ++ + G E D F + LID G+L EAL++ K+M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 117 -VTG---DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
++G + +N++I F + + EA ++ +M G + T
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT-------------- 507
Query: 173 ELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIA 228
+N L+D CK +EDA + ++M+++ D ++++++
Sbjct: 508 -------------------YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 229 GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID 288
+ G +A + +M G P+ +T ++ AG V+ RS++ + GI+
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ-MKGIN 607
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEM----NCKPDVVTWR 327
Y ++ L R K + + L EM PD V++R
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ K N EA+ +FDEM RN V++ T+I + + A +L+ M+ EG P+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 58 MFTFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+T++S+L DIK+ I ++ G E D+ LI K G + A + +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRA-CTG 168
+ + +N +I + EA+ L+++M + P D + V R C G
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 117/274 (42%), Gaps = 13/274 (4%)
Query: 127 IIAAFAQHSDGDEALYLYKKM-RRAGFPADQ---STLTSVLRACTGMSLLELGRQAHVHV 182
+I ++AQ DE L + M G D + + ++L + L+E+ A + V
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS-HAKMSV 182
Query: 183 LKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLE 238
D+ N L+ C+ L A + M +V D +++T++ G + G
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
AL++ + M G + +++ ++ G V+D ++ + M N G P + + ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 299 DLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD-A 354
+ L +AG + ++++ M PDV T+ +++ V A +++ D +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 355 EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
+T Y L +T + E+ R + KGI
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 165/331 (49%), Gaps = 21/331 (6%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E +VV + T+I K D A+ L M +G+ P++FT+SS++ C Y SD +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAFA 132
+ S +++ + +V SALID + K G+L+EA ++ EM+ D ++S+I F
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 133 QHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSL---LELGRQAHVHVLKFDQD 188
H DEA ++++ M + FP + T + C + +EL R+ L +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--GN 432
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKLFD 244
+ + L+ + + ++A+ +F +MV ++++++ ++ GL +NG +A+ +F+
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
++ P+ T ++ AG V+DGW F ++ +L G+ P Y M+ R
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRK 551
Query: 305 G---KLDDMVKLIHEMNCKPDVVTWRTLLDA 332
G + D ++K + E P+ T+ TL+ A
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 174/377 (46%), Gaps = 61/377 (16%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL-------RACEYLS 72
E ++V+ +++++ Y K A+ L+ M+ G P+ FTF++++ +A E ++
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSII 128
+ Q+ ++ G + D+ +++ K G++ ALS+ K+M G D V++N+II
Sbjct: 210 LVDQM----VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL-------RACTGMSLLE--LGRQAH 179
++ D+AL L+ +M G D T +S++ R LL + R+ +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 180 VHVLKF----------------------------DQDLILHNALLDMYCKCGSLEDAKFI 211
+V+ F D D+ +++L++ +C L++AK +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 212 FNRMVVKD----VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH 267
F M+ KD V+++ST+I G + E ++LF M G N +T ++
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 268 AGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVV 324
A D+ F+ M ++ G+ P Y +LD L + GKL + + + +PD+
Sbjct: 446 ARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 325 TWRTLLDA-CRAHRNVD 340
T+ +++ C+A + D
Sbjct: 505 TYNIMIEGMCKAGKVED 521
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
+++A +F +M P ++V + ++SA + + + + L M G+ +++T+S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 64 VLRA-C--EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV--- 117
+ C LS + + ++K+G E D+ S+L++ Y + +A+++ +MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLLEL 174
D + ++I H+ EA+ L +M + G D T +V+ G L L
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 175 GRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIF----NRMVVKDVISWSTMIAGL 230
+ K + D++++N ++D CK ++DA +F N+ + DV ++S++I+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
G +A +L M PN +T ++ A G + + + M IDP
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPD 362
Query: 291 REHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDA-CRAHR 337
Y +++ +LD+ M +L+ +C P+VVT+ TL+ C+A R
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 56/272 (20%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+VK L EA+ ++DEM +R ++ +++++I+ + D A + M+ + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 58 MFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM- 116
+ T+S++++ + K + E + +F+EM
Sbjct: 398 VVTYSTLIKG--------------------------------FCKAKRVEEGMELFREMS 425
Query: 117 ---VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
+ G+ V + ++I F Q D D A ++K+M G + T +L L +
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG-----LCK 480
Query: 174 LGRQAHVHVL-------KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVIS 222
G+ A V+ + D+ +N +++ CK G +ED +F + +K +VI+
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 223 WSTMIAGLAQNGFSLEALKLFDSMKVMGPRPN 254
++TMI+G + G EA L MK GP PN
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 93 RSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMR 148
R L + S + ++ +A+ +F +MV V +N +++A A+ + + + L ++M+
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLE 206
G D T + + S L L ++K ++ D++ ++LL+ YC +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 207 DAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
DA + ++MV D +++T+I GL + + EA+ L D M G +P+ +T V+
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK-- 320
G +D + M+ I+ Y ++D L + +DD + L EM+ K
Sbjct: 231 NGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 321 -PDVVTWRTLL 330
PDV T+ +L+
Sbjct: 290 RPDVFTYSSLI 300
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 193/454 (42%), Gaps = 71/454 (15%)
Query: 1 MYVKFNLLEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
+YVK L A VV+ M NVV++T +I A + +L+ G+ P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 57 NMFTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL--- 110
++ T+SS++ C L ++ ++K+G DV + L+D SK G +L A+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 111 -SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
+ + + + VV+NS+I + + + DEAL +++ M G D +T T+V+R +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR----V 540
Query: 170 SLLELGRQAHVHVLKF-------DQDLILHNALLDMYCK--------------------- 201
S++E GR L F + D + + L+D +CK
Sbjct: 541 SIME-GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 202 --------------CGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKLF 243
C +EDA FN ++ D+++++TMI G EA ++F
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
+ +KV PN +T+ ++ +D F M G P YGC++D +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSK 718
Query: 304 AGKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE---DT 357
+ ++ KL EM K P +V++ ++D VD AT + +DA+ D
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ--AIDAKLLPDV 776
Query: 358 GAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKE 391
AY +L Y + A + M G++ +
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 153/341 (44%), Gaps = 52/341 (15%)
Query: 12 QVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA---C 68
+V D P NVV++ T+I+ + DRA L M + G+ P++ +S+++
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 69 EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVW 124
L ++ S L G++ DV V S+ IDVY K G+L A V+K M ++ + V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
+I Q EA +Y ++ + G
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRG--------------------------------- 421
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEAL 240
+ ++ +++L+D +CKCG+L ++ M+ DV+ + ++ GL++ G L A+
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 241 KLFDSMKVMGP--RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
+ S+K++G R N + ++ D+ FR M +YGI P + ++
Sbjct: 482 RF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-GIYGIKPDVATFTTVM 538
Query: 299 DLLGRAGKLDDMVKL---IHEMNCKPDVVTWRTLLDACRAH 336
+ G+L++ + L + +M +PD + + TL+DA H
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 166/345 (48%), Gaps = 22/345 (6%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
FNLL + + E V+ + T+I K D A+ L M +G+ PN+ T+SS+
Sbjct: 241 FNLLNKME---QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 65 LRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT--- 118
+ C Y SD ++ S +++ + DVF SALID + K G+L+EA ++ EMV
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGR 176
V ++S+I F H DEA +++ M + FP D T ++++ +E G
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGM 416
Query: 177 QAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGL 230
+ + + + + +N L+ + G + A+ IF MV ++++++T++ GL
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
+NG +A+ +F+ ++ P T ++ AG V+DGW F ++ +L G+ P
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPD 535
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA 332
Y M+ R G ++ L EM P+ + TL+ A
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 159/338 (47%), Gaps = 35/338 (10%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL-------RACEYLS 72
E N+V+ +++++ Y K A+ L+ M G PN TF++++ +A E ++
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDR----VVWNSII 128
I ++ + G + D+ +++ K G+ A ++ +M G +++N+II
Sbjct: 208 LIDRMVAK----GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL----- 183
++ D+AL L+K+M G + T +S++ +C L GR + L
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI-SC----LCNYGRWSDASRLLSDMI 318
Query: 184 --KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSL 237
K + D+ +AL+D + K G L +A+ +++ MV + ++++S++I G +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 238 EALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCM 297
EA ++F+ M P+ +T ++ V++G FR M G+ Y +
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNIL 437
Query: 298 LDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA 332
+ L +AG D ++ EM P+++T+ TLLD
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 48/268 (17%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+VK L EA+ ++DEM +R ++V+++++I+ + D A ++ FM+ + P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 58 MFTFSSVLRA-CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+ T++++++ C+Y K++ E + VF+EM
Sbjct: 396 VVTYNTLIKGFCKY----KRVE-----------------------------EGMEVFREM 422
Query: 117 ----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
+ G+ V +N +I Q D D A ++K+M G P + T ++L L
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 173 ELGRQA--HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTM 226
E ++ K + + +N +++ CK G +ED +F + +K DV++++TM
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPN 254
I+G + G EA LF MK G PN
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ K+ +EE VF EM +R N V++ +I D A ++ M+ +GV PN
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 58 MFTFSSVLRA-CE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T++++L C+ L + + + +E ++ + +I+ K G++ + +F
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
+ V D V +N++I+ F + +EA L+K+M+ G + +++RA
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA----R 581
Query: 171 LLELGRQAHVHVLK 184
L + R+A ++K
Sbjct: 582 LRDGDREASAELIK 595
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 15/259 (5%)
Query: 89 DVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQHSDG-DEALYL 143
DV + ++ YS+ G+ +A+ +F+ M + V +N I+ F + + L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 144 YKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ--AHVHVLKFDQDLILHNALLDMYCK 201
+MR G D+ T ++VL AC LL ++ A + ++ + +NALL ++ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 202 CGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYIT 257
G +A + M D ++++ ++A + GFS EA + + M G PN IT
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 258 ILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
V+ A AG D+ F SMK G P Y +L LLG+ + ++M+K++ +M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 318 ---NCKPDVVTWRTLLDAC 333
C P+ TW T+L C
Sbjct: 448 KSNGCSPNRATWNTMLALC 466
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 28/346 (8%)
Query: 11 AQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
A + D++P + +V ++TT++ AYS ++A+ L M G P + T++ +L
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL- 252
Query: 67 ACEYLSDIKQIHSSILKV-------GLESDVFVRSALIDVYSKLGELLEALSVFKEMVT- 118
+ + + IL V GL+ D F S ++ ++ G L EA F E+ +
Sbjct: 253 --DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 119 ---GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC--TGMSLLE 173
V +N+++ F + EAL + K+M PAD T ++ A G S
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 174 LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAG 229
G + + I + ++D Y K G ++A +F M V + +++ +++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
L + S E +K+ MK G PN T +L C + G+ FR MK+ G +P
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC-GFEP 489
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDA 332
R+ + ++ GR G D K+ EM V T+ LL+A
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 156/358 (43%), Gaps = 30/358 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
YV+ +EA V + M ++ N +++TT+I AY D A+KL M G +PN
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 58 MFTFSSVL-------RACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL 110
T+++VL R+ E + + + S+ G + + ++ + G
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSN----GCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 111 SVFKEMVT----GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC 166
VF+EM + DR +N++I+A+ + +A +Y +M RAGF A +T ++L A
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 167 TGMSLLELGRQ--AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWS 224
G + + F ++ +L Y K G+ + I NR+ +
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 225 TMIAGLAQNGFSLEAL----KLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRS 280
++ L F AL + F K G +P+ + +L + + D S
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 281 MKNLYGIDPGREHYGCMLDLLGRAG---KLDDMVKLIHEMNCKPDVVTWRTLLDA-CR 334
++ G+ P Y ++D+ R G K ++++K + + KPD+V++ T++ CR
Sbjct: 657 IRE-DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 144/386 (37%), Gaps = 91/386 (23%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNV----VSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
++ K + EA V EM E + V++ +++AY + A ++ M ++GVMP
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
N T+++V ID Y K G+ EAL +F M
Sbjct: 385 NAITYTTV--------------------------------IDAYGKAGKEDEALKLFYSM 412
Query: 117 ----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
+ +N++++ + S +E + + M+ G +++T ++L C +
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMD 472
Query: 173 ELGRQA--HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD----VISWSTM 226
+ + + F+ D N L+ Y +CGS DA ++ M V +++ +
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRP----------------NYI-------------- 256
+ LA+ G + MK G +P NY+
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQI 592
Query: 257 --------TILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
T+L F C + + F+ +G P + ML + R D
Sbjct: 593 FPSWMLLRTLLLANFKCRALAGSERAFTLFKK----HGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 309 D---MVKLIHEMNCKPDVVTWRTLLD 331
+++ I E PD+VT+ +L+D
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMD 674
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 162/328 (49%), Gaps = 21/328 (6%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
FNLL + + E NVV ++T+I + + D A+ L M +GV PN+ T+SS+
Sbjct: 245 FNLLNKMEAA---KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 65 LRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT--- 118
+ C Y SD ++ S +++ + +V +ALID + K G+L+EA ++ EM+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSL---LE 173
D ++S+I F H DEA ++++ M + FP + T + C + +E
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 174 LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAG 229
L R+ L + + + L+ + + ++A+ +F +MV ++++++T++ G
Sbjct: 422 LFREMSQRGLV--GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
L +NG +A+ +F+ ++ P T ++ AG V+DGW F S+ +L G+ P
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKP 538
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEM 317
Y M+ R G ++ L +M
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 17/262 (6%)
Query: 10 EAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
+A + +M ER NVV++ +I A+ A KL M++ + P++FT+SS++
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 66 RA-C--EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VT 118
C + L + K + ++ +V + LI+ + K + E + +F+EM +
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
G+ V + ++I F Q D D A ++K+M G + T ++L LE
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 179 --HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQ 232
++ K + + +N +++ CK G +ED +F + +K DVI ++TMI+G +
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 233 NGFSLEALKLFDSMKVMGPRPN 254
G EA LF M+ GP P+
Sbjct: 553 KGLKEEADALFRKMREDGPLPD 574
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 162/351 (46%), Gaps = 22/351 (6%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L++A +F M P ++ + ++SA + +K D + L M R G+ N++T++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 64 VLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT-- 118
++ S I + ++K+G E + S+L++ Y + +A+++ +MV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 119 --GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + + ++I H+ EA+ L +M + G + T V+ ++L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 177 Q--AHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIF----NRMVVKDVISWSTMIAGL 230
+ K + ++++++ ++D CK +DA +F N+ V +VI++S++I+ L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
+A +L M PN +T ++ A G + + + M IDP
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK-RSIDPD 364
Query: 291 REHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDA-CRAHR 337
Y +++ +LD+ M +L+ +C P+VVT+ TL++ C+A R
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ K ++E +F EM +R N V++TT+I + + D A + M+ +GV PN
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 58 MFTFSSVLRA-CE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T++++L C+ L + + + +E ++ + +I+ K G++ + +F
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
+ V D +++N++I+ F + +EA L++KMR G D T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 173/373 (46%), Gaps = 38/373 (10%)
Query: 9 EEAQVVFDEMPERNVVSWTT------MISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
E A +VF + E + ++T ++ +YS + L D+A+ ++ G MP + +++
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 63 SVL----RACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT 118
+VL R+ +S + + +L+ + +VF + LI + G + AL++F +M T
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 119 G----DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC-------- 166
+ V +N++I + + D+ L + M G + + V+
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 167 TGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVIS 222
L E+ R+ + D + +N L+ YCK G+ A + M + VI+
Sbjct: 294 VSFVLTEMNRRG------YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 223 WSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK 282
++++I + + G A++ D M+V G PN T ++ S G +++ + R M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM- 406
Query: 283 NLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDA-CRAHRN 338
N G P Y +++ GK++D + ++ +M K PDVV++ T+L CR++ +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY-D 465
Query: 339 VDLATYAAKEILK 351
VD A +E+++
Sbjct: 466 VDEALRVKREMVE 478
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 164/346 (47%), Gaps = 29/346 (8%)
Query: 11 AQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
A +FD+M + NVV++ T+I Y ++ D KLL M +G+ PN+ +++ V+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 67 A-CE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTG 119
C + ++ + + + + G D + LI Y K G +AL + EM +T
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ + S+I + + + + A+ +MR G ++ T T+++ G S +A+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV---DGFSQKGYMNEAY 400
Query: 180 VHVLK------FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAG 229
VL+ F ++ +NAL++ +C G +EDA + M K DV+S+ST+++G
Sbjct: 401 -RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 230 LAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
++ EAL++ M G +P+ IT ++ + + M + G+ P
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPP 518
Query: 290 GREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDA 332
Y +++ G L+ ++L +EM K PDVVT+ L++
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 139/342 (40%), Gaps = 68/342 (19%)
Query: 8 LEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
+ A D+M R N ++TT++ +S + A ++L M G P++ T+++
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 64 VLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV--- 117
++ + D + + + GL DV S ++ + + ++ EAL V +EMV
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + ++S+I F + EA LY++M R G P D+ T T
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT---------------- 524
Query: 177 QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQ 232
AL++ YC G LE A + N MV K DV+++S +I GL +
Sbjct: 525 -----------------ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSH---------------AGLVDDGWHY 277
+ EA +L + P+ +T ++ CS+ G++ +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 278 FRSM--KNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
F SM KN P Y M+ RAG + L EM
Sbjct: 628 FESMLGKNH---KPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 49/328 (14%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E +VV + T+I K D A L M +G+ P++FT++ ++ C Y SD +
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG-----DRVVWNSIIAAF 131
+ S +L+ + D+ +ALID + K G+L+EA ++ EMV D V +N++I F
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 132 AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLIL 191
++ +E + ++++M + G + T T+++
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG-------------------------- 400
Query: 192 HNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+ + ++A+ +F +MV D+++++ ++ GL NG AL +F+ M+
Sbjct: 401 -------FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
+ + +T ++ A AG V+DGW F S+ +L G+ P Y M+ R G
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 308 DDMVKLIHEMNCK---PDVVTWRTLLDA 332
++ L EM P+ T+ TL+ A
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 157/359 (43%), Gaps = 69/359 (19%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL-------RACEYLSDI 74
++V+ ++++ + A+ L+ M+ G P+ TF++++ +A E ++ +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 75 KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAA 130
+++ ++K G + D+ A+I+ K GE AL++ +M G D V++N+II
Sbjct: 204 ERM---VVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL------- 183
++ D+A L+ KM G D T ++ +C L GR + L
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI-SC----LCNYGRWSDASRLLSDMLEK 314
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-----VKDVISWSTMIAGLAQNGFSLE 238
+ DL+ NAL+D + K G L +A+ +++ MV DV++++T+I G + E
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 239 ALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCML 298
+++F M G N +T ++ A D+ F+ M + G
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-----VSDG-------- 421
Query: 299 DLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA----TYAAKEILKLD 353
+H PD++T+ LLD + NV+ A Y K +KLD
Sbjct: 422 ---------------VH-----PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 174/406 (42%), Gaps = 58/406 (14%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L++A +F +M P ++V ++ ++SA + + D + L M G+ N++T+S
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 64 VLRA-C--EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV--- 117
+ C LS I ++K+G + ++L++ + + EA+++ +MV
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLLEL 174
D V + +++ QH+ EA+ L ++M G D T +V+ G L L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 175 GRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGL 230
+ K + D++++N ++D CK ++DA +FN+M K DV +++ +I+ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
G +A +L M KN I+P
Sbjct: 296 CNYGRWSDASRLLSDM---------------------------------LEKN---INPD 319
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEM----NCKPDVVTWRTLLDACRAHRNVDLATYAA 346
+ ++D + GKL + KL EM +C PDVV + TL+ ++ V+
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 347 KEILKLD-AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKE 391
+E+ + +T Y L + + ++ ++ V + M G+ +
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 173/373 (46%), Gaps = 32/373 (8%)
Query: 4 KFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
K L+EA V+ +EM + ++V+++ +I+ + V A +++ + R G+ PN
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 60 TFSSVLRACEYLSDIKQ---IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
+S+++ C + +K+ I+ +++ G D F + L+ K G++ EA F
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA-EEFMRC 573
Query: 117 VTGDRVVWNSI-----IAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA-CTGMS 170
+T D ++ N++ I + +G +A ++ +M + G T S+L+ C G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 171 LLELGR-QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI----SWST 225
L E + +H + D +++N LL CK G+L A +F MV + ++ ++++
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGP-RPNYITILGVLFACSHAGLVDDG-WH---YFRS 280
+I+GL + G ++ A+ + G PN V++ C G+ G W YFR
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPN-----KVMYTCFVDGMFKAGQWKAGIYFRE 748
Query: 281 MKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHR 337
+ G P M+D R GK++ L+ EM N P++ T+ LL +
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 338 NVDLATYAAKEIL 350
+V + + I+
Sbjct: 809 DVSTSFLLYRSII 821
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 62/308 (20%)
Query: 85 GLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQHSDGDEA 140
G V+ +A++ K GE + S KEM + D +N +I +++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 141 LYLYKKMRRAGFPADQSTLTSVL-------RACTGMSLLELGRQAHVHVLKFDQDLILHN 193
YL +KM ++G+ T +VL R + LL+ H+ D D+ +N
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD-----HMKSKGVDADVCTYN 307
Query: 194 ALLDMYCKCGSLEDAKFIF----NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVM 249
L+ C+ + + RM+ + ++++T+I G + G L A +L + M
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 250 GPRPNYITI----------------------------------LGVLF--ACSHAGLVDD 273
G PN++T GVL C +A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 274 GWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLL 330
Y R +N G+ GR Y M+D L + G LD+ V L++EM+ PD+VT+ L+
Sbjct: 428 RGFYMRMKRN--GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 331 DA-CRAHR 337
+ C+ R
Sbjct: 486 NGFCKVGR 493
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 154/364 (42%), Gaps = 44/364 (12%)
Query: 8 LEEAQVVFDEMPERNVV----SWTTMISAYSSVKLNDRAMKLLVFML-------REGVMP 56
L +A +F EM +R+++ ++T++IS R K ++ +L R V+P
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLC------RKGKTVIAILFAKEAEARGNVLP 722
Query: 57 NMFTFS----SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSV 112
N ++ + +A ++ + I + +G D+ +A+ID YS++G++ + +
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 113 FKEMVTGDR----VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTG 168
EM + +N ++ +++ D + LY+ + G D+ T S++
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 169 MSLLELGRQAHVHVLK------FDQDLILHNALLDMYCKCGSLEDA----KFIFNRMVVK 218
++LE+G + +LK + D N L+ C G + A K + + +
Sbjct: 842 SNMLEIG----LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
D + M++ L +N E+ + M G P +G++ G + +
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGKLDD---MVKLIHEMNCKPDVVTWRTLLDACRA 335
M + I P M+ L + GK D+ +++ + +M P + ++ TL+ C
Sbjct: 958 EEMI-AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016
Query: 336 HRNV 339
+ NV
Sbjct: 1017 NGNV 1020
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 25/357 (7%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEYLSDIKQIH-- 78
N VS + ++ Y ++ A +L ML+ G N++ + +L+ C L K +
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
+ + L DVF + +I + + EL +AL + EM + V W +I AF +
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQD--LILH 192
DEA+ K+M+ G AD TS++R L+ G+ VL+ I +
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
N L+ +CK G L++A IF M+ + +V +++ +I GL G + EAL+L + M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
PN +T ++ GLV D MK P Y +L L G LD
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK-RRTRPDNITYNILLGGLCAKGDLD 404
Query: 309 DMVKLIHEM-----NCKPDVVTWRTLLDA-CRAHRNVDLATYAAKEILKLDAEDTGA 359
+ KL++ M PDV+++ L+ C+ +R + A +I L E GA
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR-----LHQALDIYDLLVEKLGA 456
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 23/346 (6%)
Query: 8 LEEAQVVFDEMPERN----VVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L+ + +FDE+ ER +++ T+I + + A ++ FM+ GV PN++T++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 64 VLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
++ + K Q+ + +++ E + + +I+ K G + +A+ + + M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEA---LYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE 173
D + +N ++ D DEA LYL K P S + C L +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 174 LGRQAHVHVLKFDQ-DLILHNALLDMYCKCGSLEDA----KFIFNRMVVKDVISWSTMIA 228
+ V K D + N LL+ K G + A K I + +V++ +++ MI
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 229 GLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGID 288
G + G A L M+V +P+ +L + G +D W F M+
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF- 561
Query: 289 PGREHYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLD 331
P + M+D +AG + L+ M+ PD+ T+ L++
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 28/361 (7%)
Query: 11 AQVVFDEMPERNV----VSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
A + +M ER + V ++ +I D A L M +G ++ +++++R
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 67 ACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTG 119
Y D ++ ++K + DV SALID + K G+L EA + KEM ++
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSL----LELG 175
D V + S+I F + + D+A ++ M G + T ++ +L LEL
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 176 RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLA 231
R+ + + D + +N L+ +C+ G LE AK +F MV + D++S+ ++ GL
Sbjct: 411 RKMSLRGVV--ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
NG +AL++F+ ++ + ++ +A VDD W F S+ L G+ P
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPDV 527
Query: 292 EHYGCMLDLLGRAGKL---DDMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
+ Y M+ L + G L D + + + E P+ T+ L+ RAH AT +AK
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI---RAHLGEGDATKSAKL 584
Query: 349 I 349
I
Sbjct: 585 I 585
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 9 EEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
++A +F EM P ++ ++ + S + K D + L M +G+ N++T S +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 65 LRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT-GD 120
+ C LS I+K+G E D S LI+ G + EAL + MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 121 R---VVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA-C-TGMSLLELG 175
+ + N+++ + +A+ L +M GF ++ T VL+ C +G + L +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 176 RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLA 231
+ K D + ++ ++D CK GSL++A +FN M +K D+I ++T+I G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 232 QNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGR 291
+AG DDG R M I P
Sbjct: 294 -----------------------------------YAGRWDDGAKLLRDMIK-RKITPDV 317
Query: 292 EHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKE 348
+ ++D + GKL + +L EM PD VT+ +L+D +D A +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 349 IL-KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
++ K + + +L N Y + + +D E+ R M ++G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 192/486 (39%), Gaps = 67/486 (13%)
Query: 53 GVMPNMFTFSSVLRACEYLSDIKQIHSSIL--KVGLESDVFVRSALIDVYSKLGELLEAL 110
G++ + LR +LS ++ SS+ K + +RS ++D+ +A+
Sbjct: 3 GLIQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKED-----DAV 57
Query: 111 SVFKEMVTG---DRVV-WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRAC 166
+F+EM R++ ++ + + A+ D L L K+M G + TL+ ++ C
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 167 TGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTM 226
L L A ++K + D +++ST+
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYE-----------------------------PDTVTFSTL 148
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I GL G EAL+L D M MG +P IT+ ++ G V D M G
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE-TG 207
Query: 287 IDPGREHYGCMLDLLGRAGKLD---DMVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLAT 343
P YG +L ++ ++G+ ++++ + E K D V + ++D ++D A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 344 YAAKEI-LKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQ 402
E+ +K D Y L + + W+D A++ R M I+++ +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM----IKRKITPDVVAFSAL 323
Query: 403 IHAFILGDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQREDSLRHHSEKL 462
I F+ K + +E+ +++ Q G PDT ++G +E+ L + L
Sbjct: 324 IDCFVKEGKLR-EAEELHKEMIQ-------RGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 463 AIVFGIMSFPKEKTIRVWKNLRICGDCHI-----FAKLIAKLEQRHIVIRDPIRYHHFRD 517
++ P +T N+ I G C +L K+ R +V D + Y+
Sbjct: 376 DLMVSKGCGPNIRTF----NILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQ 430
Query: 518 GVCSCG 523
G C G
Sbjct: 431 GFCELG 436
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 15/268 (5%)
Query: 1 MYVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGV-----M 55
M+V L+ + +FD MP R+ SW + + + A L V ML+ +
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 56 PNMFTFSSVLRACEYLSDI---KQIHSSILKVGL--ESDVFVRSALIDVYSKLGELLEAL 110
P+ + VL+AC + D KQ+H+ K+G E D ++ +LI Y + L +A
Sbjct: 192 PS-WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDAN 250
Query: 111 SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
V ++ + V W + + + + E + + +M G + S ++VL+AC+ +S
Sbjct: 251 LVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVS 310
Query: 171 -LLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVIS-WSTM 226
G+Q H + +K F+ D ++ L++MY K G ++DA+ +F + +S W+ M
Sbjct: 311 DGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAM 370
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPN 254
+A QNG +EA+KL MK G + +
Sbjct: 371 VASYMQNGIYIEAIKLLYQMKATGIKAH 398
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 2 YVKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF 61
Y +F LE+A +V ++ N V+W ++ ++ + M G+ N+ F
Sbjct: 240 YGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVF 299
Query: 62 SSVLRACEYLSDI----KQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV 117
S+VL+AC ++SD +Q+H++ +K+G ESD +R LI++Y K G++ +A VFK
Sbjct: 300 SNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSK 359
Query: 118 TGDRV-VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLT 160
V WN+++A++ Q+ EA+ L +M+ G A + L
Sbjct: 360 DETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 76 QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHS 135
Q+H I+K + + + L+ ++ G L +F M D W + +
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 136 DGDEALYLYKKM----RRAGFPADQSTLTSVLRACTGMSLLELGRQAHV--HVLKF--DQ 187
D ++A +L+ M ++ F L VL+AC + ELG+Q H H L F ++
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE 228
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
D L +L+ Y + LEDA + +++ + ++W+ + + G E ++ F M
Sbjct: 229 DSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG 288
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY--GIDPGREHYGC-----MLDL 300
G + N VL ACS V DG RS + ++ I G E C ++++
Sbjct: 289 NHGIKKNVSVFSNVLKACS---WVSDGG---RSGQQVHANAIKLGFES-DCLIRCRLIEM 341
Query: 301 LGRAGKLDDMVKLIHEMNCKPDVVTWRTLL 330
G+ GK+ D K+ + V W ++
Sbjct: 342 YGKYGKVKDAEKVFKSSKDETSVSCWNAMV 371
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 182/404 (45%), Gaps = 63/404 (15%)
Query: 1 MYVKFNLLEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
+YVK L A VV+ M NVV++T +I A + +L+ G+ P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 57 NMFTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEAL--- 110
++ T+SS++ C L ++ ++K+G DV + L+D SK G +L A+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 111 -SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA---- 165
+ + + + VV+NS+I + + + DEAL +++ M G D +T T+V+R
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 166 ---------CTGMSLLELGRQAHV-----------HVL-------------------KFD 186
G+ L +L ++ + H+L K +
Sbjct: 545 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 187 QDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNGFSLEALKL 242
D++ +N ++ YC L++A+ IF + V + ++ + +I L +N A+++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
F M G +PN +T ++ S + ++ + F M+ GI P Y ++D L
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGISPSIVSYSIIIDGLC 723
Query: 303 RAGKLDDMVKLIHE-MNCK--PDVVTWRTLLDA-CRAHRNVDLA 342
+ G++D+ + H+ ++ K PDVV + L+ C+ R V+ A
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 12 QVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA---C 68
+V D P NVV++ T+I+ + DRA L M + G+ P++ +S+++
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 69 EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVW 124
L ++ S L G++ DV V S+ IDVY K G+L A V+K M ++ + V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 125 NSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK 184
+I Q EA +Y ++ + G
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRG--------------------------------- 421
Query: 185 FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEAL 240
+ ++ +++L+D +CKCG+L ++ M+ DV+ + ++ GL++ G L A+
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 241 KLFDSMKVMGP--RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDP 289
+ S+K++G R N + ++ D+ FR M +YGI P
Sbjct: 482 RF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-GIYGIKP 529
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 196/479 (40%), Gaps = 96/479 (20%)
Query: 7 LLEEAQVVFDEMPE----RNVVSWTTMISAY-------SSVKLNDRA------------- 42
LL++ VFDEMP R+V S+T +I+AY +S++L DR
Sbjct: 156 LLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYN 215
Query: 43 ----------------MKLLVFMLREGVMPNMFTFSSVLRACEYLS---DIKQIHSSILK 83
+ L M EG+ P++ T++++L AC + + + ++
Sbjct: 216 TVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND 275
Query: 84 VGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAAFAQHSDGDE 139
G+ D+ S L++ + KL L + + EM +G D +N ++ A+A+ E
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 140 ALYLYKKMRRAGFPADQSTLTSVLR--------------------------ACTGMSLLE 173
A+ ++ +M+ AG + +T + +L A T L+E
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 174 L-GRQAHV-HVLKFDQDLILHNALLDM--------YCKCGSL-EDAKFIFNRMVVKDVI- 221
+ G + V+ D++ N DM C G L EDA+ I M D++
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 222 ---SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
+++ +I Q EAL F++M +G P+ T +L++ + GLV +
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDACRA 335
+ + GI R+ + ++ + GK ++ VK +M C PD T +L
Sbjct: 516 SRLVD-SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSF 574
Query: 336 HRNVDLATYAAKEILKLDA-EDTGAYVLLSNTYANSKMWNDVAEVRRTM---RVKGIRK 390
R VD +E+ D Y ++ Y ++ W+DV E+ M RV I +
Sbjct: 575 ARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQ 633
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 151/374 (40%), Gaps = 71/374 (18%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA----------CEYLSDIK 75
+T MIS L D+ +++ M +GV ++F++++++ A E L +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 76 --QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQ 133
+I SIL + R L D LG E + E + D V +N++++A A
Sbjct: 204 NEKISPSILTYNTVINACARGGL-DWEGLLGLFAE---MRHEGIQPDIVTYNTLLSACAI 259
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE-----LGRQAHVHVLKFDQD 188
GDEA +++ M G D +T + ++ + LE LG A L D
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP---D 316
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
+ +N LL+ Y K GS++ EA+ +F M+
Sbjct: 317 ITSYNVLLEAYAKSGSIK-------------------------------EAMGVFHQMQA 345
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
G PN T +L +G DD F MK+ DP Y ++++ G G
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS-SNTDPDAATYNILIEVFGEGGYFK 404
Query: 309 DMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSN 365
++V L H+M N +PD+ T+ ++ AC K L DA Y+ ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFAC------------GKGGLHEDARKILQYMTAND 452
Query: 366 TYANSKMWNDVAEV 379
+SK + V E
Sbjct: 453 IVPSSKAYTGVIEA 466
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 163/345 (47%), Gaps = 18/345 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQIH 78
++V++ T+ISAYSS L + A +L+ M +G P ++T+++V+ C++ K++
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
+ +L+ GL D +L+ K G+++E VF +M V D V ++S+++ F +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
+ D+AL + ++ AG D T +++ ++ + +L+ D++ +
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
N +L CK L +A +FN M + D + + +I G + G A++LF MK
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
R + +T +L G +D + M + I P Y +++ L G L
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNALCSKGHLA 567
Query: 309 DMVKLIHEM---NCKPDVVTWRTLLDA-CRAHRNVDLATYAAKEI 349
+ ++ EM N KP V+ +++ CR+ D ++ K I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 26/330 (7%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
FN ++EA ++ D NV+ +T +I Y + AM L ML++G ++ T++++
Sbjct: 398 FNSVKEAGLIPD-----NVI-YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 65 LRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----V 117
L + L + ++ + + + L D + + LID + KLG L A+ +F++M +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 118 TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGF---PADQSTLTSVLRACTGMSLLEL 174
D V +N+++ F + D D A ++ M P S L + L C+ L E
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL--CSKGHLAEA 569
Query: 175 GRQAHVHVLK-FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAG 229
R + K +++ N+++ YC+ G+ D + +M+ V D IS++T+I G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 230 LAQNGFSLEALKLFDSMKVM--GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
+ +A L M+ G P+ T +L + + R M G+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE-RGV 688
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
+P R Y CM++ L + ++ EM
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 172/439 (39%), Gaps = 43/439 (9%)
Query: 105 ELLEAL-SVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
E++ +L S F + D V ++ +I + Q EA + +R GF +++
Sbjct: 149 EIVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI 207
Query: 164 RACTGMSLLELGRQAHVHVLKFDQDLILH--NALLDMYCKCGSLEDAKFIFNRM----VV 217
+ + +EL + + + + ++ N +++ CK G +E +++ V
Sbjct: 208 GSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 267
Query: 218 KDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHY 277
D+++++T+I+ + G EA +L ++M G P T V+ G +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 278 FRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDACR 334
F M G+ P Y +L + G + + K+ +M + PD+V + +++
Sbjct: 328 FAEMLR-SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 335 AHRNVDLATYAAKEILKLD-AEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPG 393
N+D A + + D Y +L Y M + +R M + G
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML------QQG 440
Query: 394 CSWIEVDKQIHAFIL-GDKSHPQIDEISRQLNQFISRLTGAGYVPDTNFVLQDLEGEQRE 452
C+ +D + IL G + E + N+ R PD+ + ++G +
Sbjct: 441 CA---MDVVTYNTILHGLCKRKMLGEADKLFNEMTER----ALFPDSYTLTILIDGHCKL 493
Query: 453 DSLRHHSEKLAIVFGIMSFPKEKTIR--------VWKNLRICGDCHIFAKLIAKLEQRHI 504
+L++ E +F M KEK IR + GD ++ A + + I
Sbjct: 494 GNLQNAME----LFQKM---KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 505 VIRDPIRYHHFRDGVCSCG 523
+ PI Y + +CS G
Sbjct: 547 -LPTPISYSILVNALCSKG 564
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 39/328 (11%)
Query: 3 VKFNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
VK + +A+ +FDEM ER + S + Y+S L+ + R+G M F
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESD---VHVYTS---------LISWNCRKGNMKRAFL-- 350
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VT 118
+ + + GL + ALID K+GE+ A + EM V
Sbjct: 351 --------------LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+VV+N++I + + DEA +Y M + GF AD T ++ + + +Q
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 179 HVHVLKFDQDL--ILHNALLDMYCKCGSLEDAKFIFNRMVVKDV----ISWSTMIAGLAQ 232
+++ L + + L+D+YCK G++E+AK +F M K V I+++ MI +
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
G EA KL +M+ G P+ T ++ A VD+ F M L G+D
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSV 575
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCK 320
Y M+ L +AGK D+ L EM K
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 48/255 (18%)
Query: 11 AQVVFDEMPERNV----VSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
A+++ +EM + V V + T+I Y + D A + M ++G ++FT +++
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 67 ACEYLS---DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTG 119
L + KQ +++ G++ + LIDVY K G + EA +F EM V
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ + +N +I A+ + EA L M G D T TS++
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG-------------- 548
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGF 235
C ++++A +F+ M +K + ++++ MI+GL++ G
Sbjct: 549 -------------------ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 236 SLEALKLFDSMKVMG 250
S EA L+D MK G
Sbjct: 590 SDEAFGLYDEMKRKG 604
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQIH 78
+ VS+T +I Y + A +L V M +GV PN T++ ++ A C+ + + +++
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
+++ G++ D + ++LI + EA+ +F EM + + V + +I+ ++
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVL 163
DEA LY +M+R G+ D T+++
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 162/339 (47%), Gaps = 30/339 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPE----RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ + N + +A + D+M E ++V++ +I + K + A + R+G+ PN
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 58 MFTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T+++++ SD ++ S ++K + +V SAL+D + K G++LEA +F+
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 115 EMV----TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL------- 163
EMV D V ++S+I H DEA ++ M G AD + +++
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 164 RACTGMSLL-ELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVK 218
R GM L E+ ++ V + + +N L+ + + G ++ A+ F++M +
Sbjct: 345 RVEDGMKLFREMSQRGLV------SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
D+ +++ ++ GL NG +AL +F+ M+ + +T V+ G V++ W F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
S+ +L G+ P Y M+ L G L ++ L +M
Sbjct: 459 CSL-SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-C--EYLSDIKQIH 78
NV++++ ++ A+ A +L M+R + P++ T+SS++ C + + + Q+
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
++ G +DV + LI+ + K + + + +F+EM + + V +N++I F Q
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
D D+A + +M G D T +L LE + K D D++ +
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
++ CK G +E+A +F + +K D+++++TM++GL G E L+ MK
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 249 MGPRPNYITI 258
G N T+
Sbjct: 499 EGLMKNDCTL 508
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 29/349 (8%)
Query: 105 ELLEALSVFKEMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLT 160
+L +A+ +F +MV V +N +++A + D + L KKM G D T
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 161 SVLRA--CTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV-- 216
V+ C L L + L ++ D + +L++ +C+ + DA + ++MV
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 217 --VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
D+++++ +I L + +A F ++ G RPN +T ++ ++ D
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLD 331
M I P Y +LD + GK+ + +L EM + PD+VT+ +L++
Sbjct: 245 ARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 332 ACRAHRNVDLATYAAKEIL-KLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRK 390
H +D A ++ K D +Y L N + +K D ++ R M +G+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 391 EPGCSWIEVDKQIHAFI-LGDKSHPQIDEISRQLNQFISRLTGAGYVPD 438
+ + I F GD Q +F S++ G PD
Sbjct: 364 NT----VTYNTLIQGFFQAGDVDKAQ---------EFFSQMDFFGISPD 399
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 168/361 (46%), Gaps = 24/361 (6%)
Query: 2 YVKFNLLEEAQVVFDEMPER-----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMP 56
+V L++A+ V +M +V ++ ++I Y L A+++L M +G P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 57 NMFTFSSVLRACEYLSDIKQIHSSILKV---GLESDVFVRSALIDVYSKLGELLEALSVF 113
N+++++ ++ L I + ++ + ++ GL+ + + LI + K + EA+ +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 114 KEM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGM 169
+EM D +NS+I+ + + AL+L + M G A+ T +++ A
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 170 SLLELGRQAHVHVLKFDQ---DLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVIS 222
++ R+ V+ + F D I +N+L+ C+ G ++ A+ +F +M+ IS
Sbjct: 543 GEIKEARKL-VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 223 WSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMK 282
+ +I GL ++G EA++ M + G P+ +T ++ AG ++DG FR ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 283 NLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNV 339
GI P + ++ L + G + D L+ E P+ TW LL + +
Sbjct: 662 -AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Query: 340 D 340
D
Sbjct: 721 D 721
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 144/336 (42%), Gaps = 53/336 (15%)
Query: 21 RNVVSWTTMISAYSSV-------KLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSD 73
RNV S +Y+ V + A + ML + P +FTF V++A
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA------ 226
Query: 74 IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV----TGDRVVWNSIIA 129
+ + E+ ALS+ ++M + V++ ++I
Sbjct: 227 --------------------------FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 130 AFAQHSDGDEALYLYKKMRRAGFPADQSTLTSV-LRACTGMSLLELGRQAHVHVLK-FDQ 187
+ ++ + +EAL L ++M G D T V L C + E + + +++ F
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGFSLEALK--LFDS 245
D I + L++ CK G ++ AK +F R+ +++ ++T+I G +G L+ K L D
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHG-RLDDAKAVLSDM 379
Query: 246 MKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAG 305
+ G P+ T +++ GLV M+N G P Y ++D + G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSYTILVDGFCKLG 438
Query: 306 KLDDMVKLIHEMNC---KPDVVTWRTLLDA-CRAHR 337
K+D+ +++EM+ KP+ V + L+ A C+ HR
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 172/382 (45%), Gaps = 19/382 (4%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV-LRACEY--LSDIKQIH 78
N V + T+I + S + A++LL M G +P+ TF+ V L C++ +++ ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGD 138
+ +L G D L++ K+G + A +F + + V++N++I F H D
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 139 EALYLYKKMRRA-GFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNA 194
+A + M + G D T S++ L+ L + +H ++ ++ +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV-LHDMRNKGCKPNVYSYTI 429
Query: 195 LLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG 250
L+D +CK G +++A + N M + + + ++ +I+ + EA+++F M G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 251 PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDM 310
+P+ T ++ + R M + G+ Y +++ R G++ +
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS-EGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 311 VKLIHEM---NCKPDVVTWRTLLDA-CRAHRNVDLATYAAKEILK-LDAEDTGAYVLLSN 365
KL++EM D +T+ +L+ CRA VD A +++L+ A + +L N
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGE-VDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 366 TYANSKMWNDVAEVRRTMRVKG 387
S M + E ++ M ++G
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRG 629
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 160/347 (46%), Gaps = 57/347 (16%)
Query: 5 FNLLEEAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSV 64
N +E A++ + NVV + T+I + + + A+ L M +G+ PN+ T++S+
Sbjct: 246 LNKMEAARI------KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 65 LRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT--- 118
+ C Y SD ++ S++L+ + +V +ALID + K G+L+EA + +EM+
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 119 -GDRVVWNSIIAAFAQHSDGDEALYLYKKM-RRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + +N +I F H+ DEA ++K M + P Q+
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT------------------- 400
Query: 177 QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQ 232
+N L++ +CKC +ED +F M +V + ++++T+I G Q
Sbjct: 401 ---------------YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLF--ACSHAGLVDDGWHYFRSMKNLYGIDPG 290
G A +F M V P I +L CS+ G +D F+ ++ ++
Sbjct: 446 AGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLCSY-GKLDTALVIFKYLQK-SEMELN 502
Query: 291 REHYGCMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDACRAHR 337
Y M++ + +AGK+ + L ++ KPDVVT+ T++ + R
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKR 549
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 170/400 (42%), Gaps = 53/400 (13%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
+++A +F +M P ++V + ++SA + + + + L M G+ +++T+S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 64 VLRA-C--EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV--- 117
+ C LS + + ++K+G E D+ S+L++ Y + +A+++ +MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 118 -TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
D + ++I H+ EA+ L +M V R C
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQM--------------VQRGC---------- 219
Query: 177 QAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQ 232
DL+ + +++ CK G ++ A + N+M + +V+ ++T+I L +
Sbjct: 220 ---------QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
A+ LF M+ G RPN +T ++ + G D +M I+P
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVV 329
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
+ ++D + GKL + KL EM + PD +T+ L++ H +D A K +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 350 LKLDA-EDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
+ D + Y L N + K D E+ R M +G+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 135/310 (43%), Gaps = 50/310 (16%)
Query: 93 RSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMR 148
R L + S + ++ +A+ +F +MV V +N +++A A+ + + + L ++M+
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 149 RAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLE 206
G D T + + S L L ++K ++ D++ ++LL+ YC +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 207 DAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVL 262
DA + ++MV D +++T+I GL + + EA+ L D M G +P+ +T
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT----- 225
Query: 263 FACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNC--- 319
YG +++ L + G +D + L+++M
Sbjct: 226 -------------------------------YGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 320 KPDVVTWRTLLDACRAHRNVDLATYAAKEI-LKLDAEDTGAYVLLSNTYANSKMWNDVAE 378
K +VV + T++D+ +R+V++A E+ K + Y L N N W+D +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 379 VRRTMRVKGI 388
+ M K I
Sbjct: 315 LLSNMLEKKI 324
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 190/424 (44%), Gaps = 48/424 (11%)
Query: 1 MYVKFNLLEEA----QVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLRE---- 52
++ K N +++A Q+V PE + + S +K +R ++ + ++ ++
Sbjct: 84 IFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIK--ERRVEFVSWLYKDMVLC 141
Query: 53 GVMPNMFTFSSVLRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLG----- 104
G+ P +TF+ ++RA C+ + +++ + + G + + F L+ Y K G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 105 -ELLEALSVFKEMVTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
ELL A+ F V ++V++N+I+++F + D++ + +KMR G D T S +
Sbjct: 202 LELLNAMESFG--VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 164 RA-CTGMSLLELGRQAHVHVLKFDQDL-------ILHNALLDMYCKCGSLEDAKFIFNRM 215
A C +L+ R ++ D+ L I +N +L +CK G LEDAK +F +
Sbjct: 260 SALCKEGKVLDASRI--FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 216 VVKDVI----SWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLV 271
D + S++ + GL ++G +EA + M G P+ + ++ G++
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 272 DDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRT 328
D MK G+ P YGC+L GK+D L+ EM NC P+ T
Sbjct: 378 SDAKTIVGLMKR-NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 329 LLDACRAHRNVDLATYAAKEILKLDAE-----DTGAYVLLSNTYANSKMWNDVAEVRRTM 383
LL + + A+E+L+ E DT ++ + S + E+ + M
Sbjct: 437 LLHSLWKMGRIS----EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 384 RVKG 387
RV G
Sbjct: 493 RVHG 496
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 198/460 (43%), Gaps = 54/460 (11%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSI 81
N V + T++S++ ND + K++ M EG++P++ TF+S + A + K + +S
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA--LCKEGKVLDASR 273
Query: 82 LKVGLESDVFV---------RSALIDVYSKLGELLEALSVFKEMVTGDRVV----WNSII 128
+ +E D ++ + ++ + K+G L +A ++F+ + D + +N +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD-- 186
+H EA + K+M G + ++ + +L + V ++K +
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI-VGLMKRNGV 392
Query: 187 -QDLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALK 241
D + + LL YC G ++ AK + M+ + + + + ++ L + G EA +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
L M G + +T ++ +G +D + M R H L L
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM---------RVHGSAALGNL 503
Query: 302 GRA--GKLDDMVKLIHEMNCKPDVVTWRTLLDA-CRAHRNVDLATYAAKEILKLDAEDTG 358
G + G +DD LI E NC PD++T+ TLL+ C+A R + A+ + + D+
Sbjct: 504 GNSYIGLVDD--SLI-ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 359 AYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDE 418
AY + + + + V + M KG K + ++ ILG QI E
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL--------ETYNSLILGLGIKNQIFE 612
Query: 419 ISRQLNQFISRLTGAGYVPDT---NFVLQDL-EGEQREDS 454
I +++ + G P+ N +Q L EGE+ ED+
Sbjct: 613 IHGLMDEMKEK----GISPNICTYNTAIQYLCEGEKVEDA 648
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 167/407 (41%), Gaps = 44/407 (10%)
Query: 2 YVKFNLLEEAQVVFDEMPERN----VVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ K LLE+A+ +F+ + E + + S+ + A +L M +G+ P+
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 58 MFTFSSVLRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+++++ ++ C+ LSD K I + + G+ D L+ Y +G++ A S+ +
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 115 EMVTGDRV----VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
EM+ + + N ++ + + EA L +KM G+ D T ++ G
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 171 LLE----------------LGRQAHVHVLKFDQ---------DLILHNALLDMYCKCGSL 205
L+ LG + ++ D DLI ++ LL+ CK G
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 206 EDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
+AK +F M+ + D ++++ I + G A ++ M+ G + T +
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---N 318
+ + + MK GI P Y + L K++D L+ EM N
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKE-KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDTGAYVLLSN 365
P+V +++ L++A + D+A + + + + G Y L+ N
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 153/341 (44%), Gaps = 54/341 (15%)
Query: 11 AQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLR 66
A + DEM +R +VV++ +++ D A+K L M G PN+ T + +LR
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 67 A-CEYLS--DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTG 119
+ C D +++ + +L+ G V + LI+ + G L A+ + ++M
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 120 DRVVWNSIIAAFAQHSDGDEAL-YLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ + +N ++ F + D A+ YL + + R +P
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP------------------------- 412
Query: 179 HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKD----VISWSTMIAGLAQNG 234
D++ +N +L CK G +EDA I N++ K +I+++T+I GLA+ G
Sbjct: 413 ---------DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
+ +A+KL D M+ +P+ IT ++ S G VD+ +F + + GI P +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTF 522
Query: 295 GCMLDLLGRAGKLD---DMVKLIHEMNCKPDVVTWRTLLDA 332
++ L ++ + D D + + CKP+ ++ L++
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 146/342 (42%), Gaps = 30/342 (8%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQIH 78
+V+++ MIS Y + A+ +L R V P++ T++++LR+ C+ L ++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
+L+ DV + LI+ + + A+ + EM T D V +N ++ +
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-------KFDQ 187
DEA+ M +G + T +LR S+ GR L F
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILR-----SMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 188 DLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLF 243
++ N L++ C+ G L A I +M + +S++ ++ G + A++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
+ M G P+ +T +L A G V+D + + G P Y ++D L +
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAK 461
Query: 304 AGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLA 342
AGK +KL+ EM + KPD +T+ +L+ VD A
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 30/343 (8%)
Query: 10 EAQVVFDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACE 69
E V +P+ ++ TT+I + + +A K+L + G +P++ T++ ++
Sbjct: 126 ENMVYHGNVPD--IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 70 YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWN 125
+I S + ++ + DV + ++ G+L +A+ V M+ D + +
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKF 185
+I A + S A+ L +MR G D T ++ L+ +KF
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD-------EAIKF 296
Query: 186 DQDL---------ILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQ 232
D+ I HN +L C G DA+ + M+ K V++++ +I L +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
G A+ + + M G +PN ++ +L +D Y M + G P
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS-RGCYPDIV 415
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMN---CKPDVVTWRTLLDA 332
Y ML L + GK++D V+++++++ C P ++T+ T++D
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 40/251 (15%)
Query: 7 LLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
LL A + ++MP+ N +S+ ++ + K DRA++ L M+ G P++ T++
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 63 SVLRA-CE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM--- 116
++L A C+ + D +I + + G + + +ID +K G+ +A+ + EM
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
+ D + ++S++ ++ DEA+ + + R G + T S++ L
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG------LCKS 532
Query: 176 RQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVISWSTMIAGLAQNGF 235
RQ + D ++ F+ NR + S++ +I GLA G
Sbjct: 533 RQTDRAI-----DFLV------------------FMINRGCKPNETSYTILIEGLAYEGM 569
Query: 236 SLEALKLFDSM 246
+ EAL+L + +
Sbjct: 570 AKEALELLNEL 580
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 187 QDLILHNALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKL 242
+D+ +N L M + G LE+ MV V D+I +T+I G + G + +A K+
Sbjct: 101 EDVESNNHLRQMV-RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 243 FDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLG 302
+ ++ G P+ IT ++ AG +++ M + P Y +L L
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLC 215
Query: 303 RAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA-CR 334
+GKL ++++ M +C PDV+T+ L++A CR
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 154/356 (43%), Gaps = 51/356 (14%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ KF L + EM + NVVS++T++ A+ + +A+K V M R G++PN
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 58 MFTFSSVLRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+T++S++ A C+ LSD ++ + +L+VG+E +V +ALID + EA +F
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461
Query: 115 EMVTG----DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
+M T + +N++I F + + D AL L +++ G
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP---------------- 505
Query: 171 LLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTM 226
DL+L+ + C +E AK + N M + + + ++T+
Sbjct: 506 -----------------DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
+ ++G E L L D MK + +T ++ LV YF + N +G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNV 339
+ + M+D L + +++ L +M K PD + +L+D NV
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 73 DIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSII 128
D+K+ ++ G VF + +ID K G++ A +F+EM + D V +NS+I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 129 AAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQD 188
F + D+ + +++M+ C + D
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDM--------------CC-------------------EPD 331
Query: 189 LILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFD 244
+I +NAL++ +CK G L + M + +V+S+ST++ + G +A+K +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 245 SMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA 304
M+ +G PN T ++ A G + D + M + G++ Y ++D L A
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEWNVVTYTALIDGLCDA 450
Query: 305 GKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLATYAAKEI 349
++ + +L +M+ P++ ++ L+ +N+D A E+
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 193 NALLDMYCKCGSLEDAKFIFNRMV----VKDVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
N LL + K G +D K F M+ V +++ MI + + G A LF+ MK
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 249 MGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD 308
G P+ +T ++ G +DD +F MK++ +P Y +++ + GKL
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM-CCEPDVITYNALINCFCKFGKLP 349
Query: 309 DMVKLIHEM---NCKPDVVTWRTLLDA 332
++ EM KP+VV++ TL+DA
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDA 376
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 158/331 (47%), Gaps = 18/331 (5%)
Query: 4 KFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
K+ +++A +F EM + NVV+++++IS S A +LL M+ + + PN+
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF++++ A + +++H ++K ++ D+F ++LI+ + L +A +F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 117 VTGDRV----VWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
V+ D +N++I F + ++ L+++M G D T T++++
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTM 226
+ ++ ++ D++ ++ LLD C G LE A +F+ M + D+ ++TM
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I G+ + G + LF S+ + G +PN +T ++ L+ + + + MK G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DG 495
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
P Y ++ R G +LI EM
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 169/359 (47%), Gaps = 31/359 (8%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQ 76
E ++V+ +++++ Y K A+ L+ M+ G P+ TF++++ S+
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFA 132
+ +++ G + ++ +++ K G++ A ++ +M + D V++N+II +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-------KF 185
++ D+AL L+K+M G + T +S++ +C L GR + L K
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLI-SC----LCSYGRWSDASQLLSDMIEKKI 251
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALK 241
+ +L+ NAL+D + K G +A+ + + M+ + D+ +++++I G + +A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
+F+ M P+ T ++ + V+DG FR M + G+ Y ++ L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGL 370
Query: 302 GRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDAC----RAHRNVDLATYAAKEILKLD 353
G D+ K+ +M PD++T+ LLD + + +++ Y K +KLD
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 161/385 (41%), Gaps = 49/385 (12%)
Query: 19 PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIK--- 75
P ++ + ++SA + +K D + L M R G+ N++T++ ++ S I
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 76 QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAF 131
+ ++K+G E + S+L++ Y + +A+++ +MV D + + ++I
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 132 AQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLIL 191
H+ EA+ L +M V R C +L+
Sbjct: 126 FLHNKASEAVALVDRM--------------VQRGC-------------------QPNLVT 152
Query: 192 HNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMK 247
+ +++ CK G ++ A + N+M + DV+ ++T+I L + +AL LF M+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 248 VMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL 307
G RPN +T ++ G D M I+P + ++D + GK
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKF 271
Query: 308 DDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDA-EDTGAYVLL 363
+ KL +M + PD+ T+ +L++ H +D A + ++ D D Y L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 364 SNTYANSKMWNDVAEVRRTMRVKGI 388
+ SK D E+ R M +G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGL 356
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 159/331 (48%), Gaps = 18/331 (5%)
Query: 4 KFNLLEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
K+ +++A +F EM + NVV+++++IS S A +LL M+ + + PN+
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 60 TFSSVLRAC---EYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
TF++++ A + ++++ ++K ++ D+F ++L++ + L +A +F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 117 VTGD----RVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLL 172
V+ D V +N++I F + ++ L+++M G D T T++++
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 173 ELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTM 226
+ ++ ++ D++ ++ LLD C G LE A +F+ M + D+ ++TM
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 227 IAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYG 286
I G+ + G + LF S+ + G +PN +T ++ L+ + + + MK G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DG 570
Query: 287 IDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
P Y ++ R G +LI EM
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 171/359 (47%), Gaps = 31/359 (8%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQ 76
E ++V+ +++++ Y K A+ L+ M+ G P+ TF++++ S+
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFA 132
+ +++ G + ++ +++ K G+ AL++ +M + D V++N+II +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-------KF 185
++ D+AL L+K+M G + T +S++ +C L GR + L K
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLI-SC----LCSYGRWSDASQLLSDMIEKKI 326
Query: 186 DQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALK 241
+ +L+ NAL+D + K G +A+ +++ M+ + D+ ++++++ G + +A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 242 LFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLL 301
+F+ M P+ +T ++ + V+DG FR M + G+ Y ++ L
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGL 445
Query: 302 GRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDAC----RAHRNVDLATYAAKEILKLD 353
G D+ K+ +M PD++T+ LLD + + +++ Y K +KLD
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 160/354 (45%), Gaps = 28/354 (7%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L++A +F M P ++V + ++SA + +K D + L M R ++ ++T++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 64 VLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT-- 118
++ S I + ++K+G E + S+L++ Y + +A+++ +MV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 119 --GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACT--GMSLLEL 174
D + + ++I H+ EA+ L +M + G + T V+ G + L L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 175 GRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGL 230
+ K + D+++ N ++D CK ++DA +F M K +V+++S++I+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 231 AQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPG 290
G +A +L M PN +T ++ A G + + M IDP
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPD 364
Query: 291 REHYG------CMLDLLGRAGKLDDMVKLIHEMNCKPDVVTWRTLLDA-CRAHR 337
Y CM D L +A + M + + +C PDVVT+ TL+ C++ R
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQ---MFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 198/436 (45%), Gaps = 30/436 (6%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQ 76
E + V + T+++ A++L+ M+ G P + T ++++ +SD
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFA 132
+ +++ G + + +++V K G+ A+ + ++M + D V ++ II
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLI 190
+ D A L+ +M GF AD T +++ + G + ++K +++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 191 LHNALLDMYCKCGSLEDA----KFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
+ L+D + K G L +A K + R + + I+++++I G + EA+++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGK 306
G P+ +T ++ A +DDG FR M +L G+ Y ++ ++GK
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGK 453
Query: 307 LDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAE-DTGAYVL 362
L+ KL EM +PD+V+++ LLD + ++ A +I K E D G Y++
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 363 LSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILGDKSHPQIDEISRQ 422
+ + N+ +D ++ ++ +KG++ +D + + ++ + D +S+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVK---------LDARAYNIMISELCRK--DSLSKA 562
Query: 423 LNQFISRLTGAGYVPD 438
+ ++T G+ PD
Sbjct: 563 -DILFRKMTEEGHAPD 577
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 178/400 (44%), Gaps = 37/400 (9%)
Query: 15 FDEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTF----SSVLRACEY 70
F +RN+ + S +K +D A+ L M++ +P + F S++ + +Y
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADD-AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 71 ---LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVV 123
L+ KQ+ S G+ ++ S +I+ + + +L A S +++ D V+
Sbjct: 105 ELVLALCKQMESK----GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 124 WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL 183
+N+++ EAL L +M G TL +++ G+ L G+ + VL
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV---NGLCLN--GKVSDAVVL 215
Query: 184 -------KFDQDLILHNALLDMYCKCG----SLEDAKFIFNRMVVKDVISWSTMIAGLAQ 232
F + + + +L++ CK G ++E + + R + D + +S +I GL +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
+G A LF+ M++ G + + IT ++ +AG DDG R M I P
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVV 334
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA-CRAHRNVDLATYAAKE 348
+ ++D + GKL + +L+ EM P+ +T+ +L+D C+ +R +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 349 ILKLDAEDTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
I K D + +L N Y + +D E+ R M ++G+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 152/392 (38%), Gaps = 119/392 (30%)
Query: 8 LEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L+ A +F+EM + +++++ T+I + + D KLL M++ + PN+ TFS
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS- 337
Query: 64 VLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTG 119
LID + K G+L EA + KEM +
Sbjct: 338 -------------------------------VLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 120 DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAH 179
+ + +NS+I F + + +EA+ + M + + C
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLM--------------ISKGC------------- 399
Query: 180 VHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGF 235
D D++ N L++ YCK ++D +F M V+ + ++++T++ G Q+G
Sbjct: 400 ------DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 236 SLEALKLFDSMKVMGPRPNYIT-------------------ILG---------------- 260
A KLF M RP+ ++ I G
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 261 VLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRA---GKLDDMVKLIHEM 317
++ +A VDD W F S+ L G+ Y M+ L R K D + + + E
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLP-LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 318 NCKPDVVTWRTLLDACRAHRNVDLATYAAKEI 349
PD +T+ L+ RAH D AT AA+ I
Sbjct: 573 GHAPDELTYNILI---RAHLGDDDATTAAELI 601
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 148/313 (47%), Gaps = 18/313 (5%)
Query: 10 EAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
+A +FD+M + NVV + T+I K D A+ LL M ++G+ P++ T++S++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 66 RA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVT---- 118
C SD ++ S + K + DVF +ALID K G + EA ++EM+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
D V ++ +I +S DEA ++ M G D T + ++ +E G +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 179 HVHVLKFD--QDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQ 232
+ + ++ + + L+ YC+ G L A+ IF RMV ++I+++ ++ GL
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
NG +AL + M+ G + +T ++ AG V D W + S+ N G+ P
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIW 467
Query: 293 HYGCMLDLLGRAG 305
Y M+ L + G
Sbjct: 468 TYTTMMLGLYKKG 480
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 21/348 (6%)
Query: 3 VKFNLLEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
++F L+++ +F M P ++ ++ ++SA S +K D + L M G+ N+
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 59 FTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T + +L C LS ++K+G E + +L++ + + + +AL +F +
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 116 MV----TGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA-CTGMS 170
MV + V++N+II + D AL L +M + G D T S++ C+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 171 LLELGRQAHVHVLK-FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWST 225
+ R + D+ NAL+D K G + +A+ + M+ + D++++S
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY 285
+I GL EA ++F M G P+ +T ++ + V+ G F M
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ-R 355
Query: 286 GIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLL 330
G+ Y ++ RAGKL+ ++ M P+++T+ LL
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 157/371 (42%), Gaps = 56/371 (15%)
Query: 36 VKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSIL------KVGLESD 89
+KL+D ++ L M++ +P++ FS +L A +S +K+ I +G+ +
Sbjct: 60 MKLDD-SLDLFFHMVQCRPLPSIADFSRLLSA---ISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 90 VFVRSALIDVYSKLGELLEALSVFKEMVT----GDRVVWNSIIAAFAQHSDGDEALYLYK 145
+ + L++ + + +L ALS +M+ V + S++ F + +ALY++
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 146 KMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSL 205
+M G+ + ++++N ++D CK +
Sbjct: 176 QMVGMGYKPN---------------------------------VVIYNTIIDGLCKSKQV 202
Query: 206 EDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGV 261
++A + NRM + DV++++++I+GL +G +A ++ M P+ T +
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 262 LFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLD---DMVKLIHEMN 318
+ AC G V + ++ M +DP Y ++ L +LD +M +
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 319 CKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLD-AEDTGAYVLLSNTYANSKMWNDVA 377
C PDVVT+ L++ + V+ E+ + +T Y +L Y + N
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 378 EVRRTMRVKGI 388
E+ R M G+
Sbjct: 382 EIFRRMVFCGV 392
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 123/281 (43%), Gaps = 48/281 (17%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQIH 78
+VV++ ++IS S A +++ M + + P++FTF++++ AC +S+ ++ +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAAFAQH 134
+++ L+ D+ S LI L EA +F MV+ D V ++ +I + +
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ---------AHVHVLKF 185
+ + L+ +M + G + T T +++ L + + H +++ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 186 ----------------------------DQDLILHNALLDMYCKCGSLEDAKFIFNRM-- 215
D D++ +N ++ CK G + DA I+ +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 216 --VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPN 254
++ D+ +++TM+ GL + G EA LF MK G PN
Sbjct: 460 QGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 163/401 (40%), Gaps = 92/401 (22%)
Query: 22 NVVSWTTMISAY-----------------------------------SSVKLNDRAMKLL 46
NVV +TT+I + S K D A L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 47 VFMLREGVMPNMFTF----SSVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSK 102
V M+ G+ PN FT+ S + A E+ S K + + + G+ + + + LI+ Y K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK-EMRECGVLPNKVLCTGLINEYCK 569
Query: 103 LGELLEALSVFKEMVT----GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQST 158
G+++EA S ++ MV GD + ++ ++ D+A ++++MR G D +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 159 LTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMV 216
++ + + ++ +++ ++I++N LL +C+ G +E AK + + M
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 217 VK----DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVD 272
VK + +++ T+I G ++G EA +LFD MK+ G P+ ++ C V+
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 273 DGWHYFRSMK--------------------------------------NLYGIDPGREHY 294
F + K + +G P Y
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTY 808
Query: 295 GCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDA 332
M+D L + G L+ +L H+M N P V+T+ +LL+
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 163/395 (41%), Gaps = 58/395 (14%)
Query: 4 KFNLLEEAQVVFDEMPERNVV----SWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMF 59
K ++E+A+ +FD M ++ ++ ++I Y K + +LLV M + ++ + +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 60 TFSSVLRACEYLSDIK---QIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM 116
T+ +V++ D+ I ++ G +V + + LI + + +A+ V KEM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 117 ----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA------- 165
+ D +NS+I ++ DEA +M G + T + +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 166 ---------------------CTGMSLLELGRQAHV------HVLKFDQDLI----LHNA 194
CTG+ + E ++ V + DQ ++ +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGL-INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 195 LLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMG 250
L++ K ++DA+ IF M + DV S+ +I G ++ G +A +FD M G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 251 PRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDM 310
PN I +L +G ++ M ++ G+ P Y ++D ++G L +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 311 VKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLA 342
+L EM K PD + TL+D C +V+ A
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 159/378 (42%), Gaps = 27/378 (7%)
Query: 33 YSSVKLN-DRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQIHSSILKVGLES 88
+ + LN D A+KL M+ +G++P +T+ ++ C+ L D K + + +G+
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 89 DVFVRSALIDVYSKLGELLEALSVFKEMVT-GDRV---VWNSIIAAFAQHSDGDEALYLY 144
D S LID K A + EMV+ G + +++ I ++ ++A L+
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 145 KKMRRAGF-PADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLIL-----HNALLDM 198
M +G P Q+ + + C ++ RQ + +++ + I+ + ++
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNV----RQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 199 YCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPN 254
C G L+ A I M+ +V+ ++T+I QN +A+++ MK G P+
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 255 YITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL---DDMV 311
++ S A +D+ + M G+ P YG + A + D V
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 312 KLIHEMNCKPDVVTWRTLLDA-CRAHRNVDLATYAAKEILKLDAEDTGAYVLLSNTYANS 370
K + E P+ V L++ C+ + ++ + + + D Y +L N +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 371 KMWNDVAEVRRTMRVKGI 388
+D E+ R MR KGI
Sbjct: 606 DKVDDAEEIFREMRGKGI 623
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ N EA + D++ E NVV + T+I + + A+ +L M + G+ P+
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 58 MFTFSSVLRACEYLSD---IKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T++S++ + +I S ++++G+ DV SALIDVY K G+LLEA +
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN 278
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL------- 163
EM V + V +NS+I H DEA + + GF + T +++
Sbjct: 279 EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Query: 164 RACTGMSLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KD 219
R GM +L + + V D D +N L YC+ G A+ + RMV D
Sbjct: 339 RVDDGMKILCVMSRDGV-----DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 220 VISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFR 279
+ +++ ++ GL +G +AL + ++ IT ++ A V+D W+ F
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 280 SMKNLYGIDPGREHYGCMLDLLGR 303
S+ L G+ P Y M+ L R
Sbjct: 454 SLA-LKGVSPDVITYITMMIGLRR 476
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 147/345 (42%), Gaps = 50/345 (14%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHS-- 79
++ S+TT+I + A+ L M++ G P++ TF S++ +++ + S
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 80 -SILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIA-AFAQ 133
I+ +G E +V + + +ID + G++ AL V K M + D V +NS+I F
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 134 HSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFDQDLILHN 193
+ G A L MR P D+I +
Sbjct: 233 GTWGVSARILSDMMRMGISP----------------------------------DVITFS 258
Query: 194 ALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKVM 249
AL+D+Y K G L +AK +N M+ + ++++++++I GL +G EA K+ + +
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 250 GPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDD 309
G PN +T ++ A VDDG M G+D Y + +AGK
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR-DGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 310 MVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILK 351
K++ M PD+ T+ LLD H + A +++ K
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 179 HVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQNG 234
H+ +L DL L+D +C+C L A +M+ ++++ +++ G
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 235 FSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHY 294
EA+ L D + +G PN + ++ + G V+ + MK + GI P Y
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM-GIRPDVVTY 222
Query: 295 GCMLDLLGRAGK-------LDDMVKLIHEMNCKPDVVTWRTLLDA 332
++ L +G L DM++ M PDV+T+ L+D
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMR----MGISPDVITFSALIDV 263
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 157/333 (47%), Gaps = 18/333 (5%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
Y +N +E+A +FD++ + NVV++TT+I + + A++L M G PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 58 MFTFSSVLRA-CEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T+++++ CE D + ++K +E +V +ALID + K+G+L+EA ++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
M V D + S+I + DEA ++ M R G ++ T+++
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 171 LLELGRQAHVHVLK--FDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWS 224
+E G + + + + I + L+ YC G + A+ +FN+M + D+ +++
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 225 TMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL 284
++ GL NG +AL +F+ M+ N +T ++ G V+D + F S+ +
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS- 461
Query: 285 YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
G+ P Y M+ R G + + L +M
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 157/346 (45%), Gaps = 29/346 (8%)
Query: 19 PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIH 78
P +++ +T ++S + + D + L M G+ P + T + V+ C LS
Sbjct: 79 PLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH-CVCLSSQPCRA 137
Query: 79 SSIL----KVGLESDVFVRSALIDVYSKLGELLEALSVFKEMV----TGDRVVWNSIIAA 130
S L K+G E D+ ++L++ Y + +A+++F +++ + V + ++I
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 131 FAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL------- 183
++ + A+ L+ +M G + T +++ TG L E+GR L
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV---TG--LCEIGRWGDAAWLLRDMMKR 252
Query: 184 KFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQNGFSLEA 239
+ + ++I AL+D + K G L +AK ++N M V DV ++ ++I GL G EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 240 LKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLD 299
++F M+ G PN + ++ + V+DG F M G+ Y ++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ-KGVVANTITYTVLIQ 371
Query: 300 LLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDACRAHRNVDLA 342
G+ D ++ ++M+ + PD+ T+ LLD + V+ A
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQ 76
E NV+++T +I A+ V A +L M++ V P++FT+ S++ C Y L + +Q
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFA 132
+ + + G + + + LI + K + + + +F EM V + + + +I +
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA--CTGMSLLELGRQAHVHVLKFDQDLI 190
D A ++ +M P D T +L C G L ++ + D +++
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 191 LHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSM 246
+ ++ CK G +EDA +F + K +VI+++TMI+G + G EA LF M
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 247 KVMGPRPN 254
K G PN
Sbjct: 495 KEDGFLPN 502
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 33/304 (10%)
Query: 108 EALSVFKEMVTGDRVV----WNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL 163
+AL +F MV + + +++ A+ + D + L+++M+ G P T V+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 164 RACTGMSLLE------LGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMV- 216
C +S LG+ L F+ DL+ +LL+ YC +EDA +F++++
Sbjct: 126 H-CVCLSSQPCRASCFLGKMMK---LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 217 ---VKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDD 273
+V++++T+I L +N A++LF+ M G RPN +T ++ G D
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 274 GWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL---DDMVKLIHEMNCKPDVVTWRTLL 330
R M I+P + ++D + GKL ++ ++ +M+ PDV T+ +L+
Sbjct: 242 AAWLLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 331 DACRAHRNVDLATYAAKEILKLDAEDTGA------YVLLSNTYANSKMWNDVAEVRRTMR 384
+ + +D A+++ L E G Y L + + SK D ++ M
Sbjct: 301 NGLCMYGLLD----EARQMFYL-MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 385 VKGI 388
KG+
Sbjct: 356 QKGV 359
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 157/329 (47%), Gaps = 17/329 (5%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRAC---EYLSDIKQ 76
E + ++++T+++ + A+ L+ M+ P++ T S+++ +S+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFA 132
+ +++ G + D +++ K G AL +F++M + V ++ +I +
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLKFD--QDLI 190
+ D+AL L+ +M G AD T +S++ + G + ++ + D++
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 191 LHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSM 246
+AL+D++ K G L +AK ++N M+ + D I+++++I G + EA ++FD M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 247 KVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGK 306
G P+ +T ++ + A VDDG FR + + G+ P Y ++ ++GK
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQSGK 435
Query: 307 LDDMVKLIHEM---NCKPDVVTWRTLLDA 332
L+ +L EM P VVT+ LLD
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 50/273 (18%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ K N L EA +FD M E ++V+++ +I++Y K D M+L + +G++PN
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 58 MFTFSS-VLRACEY--LSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
T+++ VL C+ L+ K++ ++ G+ V L+D GEL +AL +F+
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMS 170
+M +T ++N II S D+A L+ + G D
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD--------------- 524
Query: 171 LLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTM 226
++ +N ++ CK GSL +A +F +M D +++ +
Sbjct: 525 ------------------VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 227 I-AGLAQNGFSLEALKLFDSMKVMGPRPNYITI 258
I A L +G + +++L + MKV G + TI
Sbjct: 567 IRAHLGGSGL-ISSVELIEEMKVCGFSADSSTI 598
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 20/314 (6%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYL---SDIKQ 76
E NVV + T+I + A++LL M ++G+ ++ T++++L Y SD +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 77 IHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEMVTG----DRVVWNSIIAAFA 132
+ ++K + DV +ALIDV+ K G L EA ++KEM+ + V +NSII
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 133 QHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQ--AHVHVLKFDQDLI 190
H +A + M G + T +++ +++ G + + F+ D+
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 191 LHNALLDMYCKCGSLEDAKFIF----NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSM 246
+N L+ YC+ G L A IF +R V D+I+ ++ GL NG AL FD M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 247 KVMGPRPNYITILG---VLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
+ YI I+ ++ A V+ W F + + G+ P Y M+ L +
Sbjct: 413 R---ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP-VEGVKPDARTYTIMILGLCK 468
Query: 304 AGKLDDMVKLIHEM 317
G + +LI M
Sbjct: 469 NGPRREADELIRRM 482
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHSSI 81
++ S+T +I + A+ +L M++ G P++ TF S+L ++ I S +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 82 L---KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
+ K G E +V V + LID K GEL AL + EM + D V +N+++
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVLK--FDQDLILH 192
+A + + M + D T T+++ L+ ++ + +++ D + + +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
N++++ C G L DAK F+ M K +V++++T+I+G + E +KLF M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 249 MGPRPNYIT 257
G + T
Sbjct: 345 EGFNADIFT 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 19/262 (7%)
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE-LG 175
++ D + +I F + S AL + KM + G+ T S+L G L+ +G
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLH---GFCLVNRIG 158
Query: 176 RQAHVHVL----KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMI 227
+ +L ++ +++++N L+D CK G L A + N M K DV++++T++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
GL +G +A ++ M P+ +T ++ G +D+ ++ M +
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ-SSV 277
Query: 288 DPGREHYGCMLDLLGRAGKLDDMVK---LIHEMNCKPDVVTWRTLLDACRAHRNVDLATY 344
DP Y +++ L G+L D K L+ C P+VVT+ TL+ R VD
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD---E 334
Query: 345 AAKEILKLDAEDTGAYVLLSNT 366
K ++ E A + NT
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNT 356
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 30/339 (8%)
Query: 2 YVKFNLLEEAQVVFDEMPE----RNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
+ + N +EA + D M NVV + T+I+ + + A+++ M ++G+ +
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 58 MFTFSSVLRACEYL---SDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
T+++++ +D ++ ++K ++ +V +ALID + K G LLEA +++K
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 115 EM----VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL------- 163
EM V + +NS+I F H +A Y++ M G D T +++
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 164 RACTGMSLL-ELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVK 218
R GM L E+ Q V D +N L+ YC+ G L A+ +FNRM V
Sbjct: 339 RVEDGMKLFCEMTYQGLV------GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 219 DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYF 278
D+++++ ++ L NG +AL + + ++ + IT ++ + + W F
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 279 RSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM 317
RS+ G+ P Y M+ L R G + KL M
Sbjct: 453 RSLTR-KGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 190/410 (46%), Gaps = 32/410 (7%)
Query: 8 LEEAQVVFDEM----PERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
++A +F EM P ++V +T +++ + + D + L M G+ ++++F+
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 64 VLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM---- 116
++ C LS + ++K+G + +L++ + + EA+S+ M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 117 VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGR 176
+ V++N++I ++ D + AL ++ M + G AD T +++ +G+S GR
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI---SGLS--NSGR 234
Query: 177 QAHVHVL-------KFDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWST 225
L K D ++I AL+D + K G+L +A+ ++ M VV +V ++++
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLY 285
+I G +G +A +FD M G P+ +T ++ + V+DG F M
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQ 353
Query: 286 GIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM-NC--KPDVVTWRTLLDACRAHRNVDLA 342
G+ Y ++ +AGKL+ K+ + M +C PD+VT+ LLD + ++ A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 343 TYAAKEILKLDAE-DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKE 391
+++ K + + D Y ++ + + + R++ KG++ +
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 22 NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRA-CEY--LSDIKQIH 78
NV+ +T +I + A L M+R V+PN+FT++S++ C + L D K +
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 79 SSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQH 134
++ G DV + LI + K + + + +F EM + GD +N++I + Q
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 135 SDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLE--LGRQAHVHVLKFDQDLILH 192
+ A ++ +M G D T +L +E L + + D D+I +
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 193 NALLDMYCKCGSLEDAKFIFNRMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKV 248
N ++ C+ L++A +F + K D I++ TMI+GL + G EA KL MK
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 249 MGPRPN 254
G P+
Sbjct: 493 DGFMPS 498
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 2 YVKFNLLEEAQVVF---DEMPERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNM 58
Y + L EA+ VF E+ +R V+ + MI AY K ++A +L M+ GV P+
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 59 FTFSS---VLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKE 115
T+++ +L + + + + + G SD A+I + KLG+L A V+KE
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 116 MVT----GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSL 171
MV D VV+ +I AFA + +A+ + M+ AG P +
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS--------------- 645
Query: 172 LELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIF-------NRMVVKDVISWS 224
+++N+L+ +Y K G L++A+ I+ N+ DV + +
Sbjct: 646 ------------------VIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 225 TMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL 284
MI ++ +A +FDSMK G N T +L G ++ + M+ +
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 285 YGI-DPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTL 329
+ DP Y +L L G+ + V+ EM +PD T+++L
Sbjct: 747 KILTDP--LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 18/333 (5%)
Query: 25 SWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHS--SIL 82
++ TMI Y A + ML EG++P TF++++ + ++ S +
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQHSDGD 138
K+ D + LI +++K ++ A + FKEM + D V + +++ AF+ +
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 139 EALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG----RQAHVHVLKFDQDLILHNA 194
EA L +M D+ T +++ R +LE ++ HV + ++A
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG---YSA 476
Query: 195 LLDMYCKCGSLEDAKFIF---NRMVVKDVISWSTMIAGLAQNGFSLEALKLFDSMKVMGP 251
+D Y + G L +A+ +F + + VI ++ MI + +A +LF+SM G
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 252 RPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDL--LGRAGKLDD 309
P+ T ++ + A + G Y M+ + + + LG+ ++
Sbjct: 537 TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEE 596
Query: 310 MVKLIHEMNCKPDVVTWRTLLDACRAHRNVDLA 342
+ K + E N +PDVV + L++A NV A
Sbjct: 597 VYKEMVEYNIEPDVVVYGVLINAFADTGNVQQA 629
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 188/440 (42%), Gaps = 50/440 (11%)
Query: 20 ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIHS 79
E N++ T I + ++A++ L M G++PN+ T++ ++R D+ ++
Sbjct: 274 EPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRG---YCDLHRVEE 330
Query: 80 SILKVGLESDVFVRSALID---VYSKLGEL------LEALSVFKEM-----VTGDRVVWN 125
+I L D+ + L D Y+ +G L +E + K+M + D+V +N
Sbjct: 331 AI---ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 126 SIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQAHVHVL-- 183
++I +H DEAL+ K + GF D+ ++++ A L + GR + L
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA-----LCKEGRMSEAKDLIN 442
Query: 184 ------KFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVV----KDVISWSTMIAGLAQN 233
D++ + A+++ +C+ G ++ AK + M + +S++ ++ G+ +
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 234 GFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREH 293
G SLEA ++ + + PN IT ++ G + + R M L G PG
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV-LKGFFPGPVE 561
Query: 294 YGCMLDLLGRAGKLDDMVKLIHE---MNCKPDVVTWRTLLDACRAHRNVDLATYAAKEIL 350
+L L R G+ + K + E C +VV + T++ + +D A ++
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 351 KLDAE-DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGIRKEPGCSWIEVDKQIHAFILG 409
++ D Y L +T + E+ + M KGI P + IH +
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP----VTYRTVIHRYCQM 677
Query: 410 DKSHPQIDEISRQLNQFISR 429
K +D++ L + ISR
Sbjct: 678 GK----VDDLVAILEKMISR 693
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 57/368 (15%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL----RACEYLSDIKQIHSSI 81
+ +M+ S KL + ++LV M R G+ FS V+ RA + L D ++ + +
Sbjct: 210 YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQ-LRDALKVLTLM 268
Query: 82 LKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VTGDRVVWNSIIAAFAQHSDG 137
+ G+E ++ + + IDV+ + L +AL + M + + V +N +I +
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 138 DEALYLYKKMRRAGFPADQSTLTSVL-RACTGMSLLE----LGRQAHVHVLKFDQ----- 187
+EA+ L + M G D+ + +++ C ++E + + A H L DQ
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 188 ----------------------------DLILHNALLDMYCKCGSLEDAKFIFNRMVVK- 218
D + ++A++ CK G + +AK + N M+ K
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 219 ----DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDG 274
DV++++ ++ G + G +A KL M G +PN ++ +L G +
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 275 WHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLD 331
+M + P Y ++ L R GKL + ++ EM K P V LL
Sbjct: 509 REMM-NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 332 A-CRAHRN 338
+ CR R
Sbjct: 568 SLCRDGRT 575
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 32/346 (9%)
Query: 10 EAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVL 65
EA + EM E N+ ++T +I + S ++A +LL ML +G+MPN+ T+++++
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 66 RA-CE--YLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VT 118
C+ + D + + L + + LI Y K + +A+ V +M V
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVL-------RACTGMSL 171
D V +NS+I + + D A L M G DQ T TS++ R L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 172 LELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDAKFIFNRMVVKDVI----SWSTMI 227
+ Q V + +++++ AL+D YCK G +++A + +M+ K+ + +++ +I
Sbjct: 520 FDSLEQKGV-----NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 228 AGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGI 287
GL +G EA L + M +G +P T ++ G D + F+ M + G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS-SGT 633
Query: 288 DPGREHYGCMLDLLGRAGKL---DDMVKLIHEMNCKPDVVTWRTLL 330
P Y + R G+L +DM+ + E PD+ T+ +L+
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 183/417 (43%), Gaps = 86/417 (20%)
Query: 26 WTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSSVLRACEYLSDIKQIH---SSIL 82
+ T++++ + L D ++ + ML + V PN++T++ ++ L ++++ + S I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 83 KVGLESDVFVRSALIDVYSKLGELLEALSVFKEM-VTGDR---VVWNSIIAAFAQHSDGD 138
+ GL+ D F ++LI Y + +L A VF EM + G R V + +I D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 139 EALYLYKKMR-RAGFPADQS------TLTSVLRACTGMSLL----ELGRQAHVHV----- 182
EA+ L+ KM+ FP ++ +L R ++L+ E G + ++H
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 183 ------LKFDQ---------------DLILHNALLDMYCKCGSLEDA------------- 208
KF++ ++I +NAL++ YCK G +EDA
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 209 -------------------------KFIFNRMVVKDVISWSTMIAGLAQNGFSLEALKLF 243
+ R V+ DV++++++I G ++G A +L
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 244 DSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGR 303
M G P+ T ++ + + V++ F S++ G++P Y ++D +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCK 544
Query: 304 AGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVDLATYAAKEILKLDAEDT 357
AGK+D+ ++ +M NC P+ +T+ L+ A + AT ++++K+ + T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 173/409 (42%), Gaps = 25/409 (6%)
Query: 2 YVKFNLLEEAQVVFDEMP----ERNVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPN 57
Y + L+ A VF+EMP RN V++T +I + D AM L V M + P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 58 MFTFSSVLRA---CEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFK 114
+ T++ ++++ E S+ + + + G++ ++ + LID + +A +
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 115 EMVT----GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRA-CTGM 169
+M+ + + +N++I + + ++A+ + + M + T +++ C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 170 SLLELGRQAHVHVLKFDQDLILHNALLDMYCKCGSLEDA----KFIFNRMVVKDVISWST 225
+G + K D++ +N+L+D C+ G+ + A + +R +V D ++++
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSM--KN 283
MI L ++ EA LFDS++ G PN + ++ AG VD+ M KN
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 284 LYGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEM---NCKPDVVTWRTLLDACRAHRNVD 340
P + ++ L GKL + L +M +P V T L+ + D
Sbjct: 563 CL---PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 341 LATYAAKEILKLDAE-DTGAYVLLSNTYANSKMWNDVAEVRRTMRVKGI 388
A +++L + D Y TY D ++ MR G+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 160/342 (46%), Gaps = 22/342 (6%)
Query: 7 LLEEAQVVFDEMPERNV----VSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFS 62
L +EA EM + + VS+ T+I + V RA K LV + E N+ T +
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-KALVDEISE---LNLITHT 231
Query: 63 SVLRACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM----VT 118
+L + L I++ + ++ G + DV S++I+ K G++LE + +EM V
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 119 GDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELGRQA 178
+ V + +++ + + + AL LY +M G P D T ++ L +
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 179 HVHVLKFDQ--DLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWSTMIAGLAQ 232
+L+ +Q +++ + AL+D CK G L A+FI +M V+ +V+++S+MI G +
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 233 NGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNLYGIDPGRE 292
G EA+ L M+ PN T V+ AG + + M+ L G++
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR-LIGVEENNY 470
Query: 293 HYGCMLDLLGRAGKLDDMVKLIHEMNCKP---DVVTWRTLLD 331
+++ L R G++ ++ L+ +M K D + + +L+D
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 157/358 (43%), Gaps = 25/358 (6%)
Query: 42 AMKLLVFMLREGVMPNMFTFSSVLRACEYLS----DIKQIHSSILKVGLESDVFVRSALI 97
A + L M GV+P+ ++S++ + I+S ++ G+ DVF + LI
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 98 DVYSKLGELLEALSVFKEMVTG-DRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQ 156
+ K+G L A+S+ + V D V +N++I+ +H DEA +M + G D
Sbjct: 137 HSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDT 196
Query: 157 STLTSVLRACTGMSLLELGRQAHVHVLK---FDQDLILHNALLDMYCKCGSLEDAKFIFN 213
+ +++ ++G L + +LI H LL Y ++E+A +
Sbjct: 197 VSYNTLIDG-----FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YR 248
Query: 214 RMVVK----DVISWSTMIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAG 269
MV+ DV+++S++I L + G LE L M+ M PN++T ++ + A
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
Query: 270 LVDDGWHYFRSMKNLYGIDPGREHYGCMLDLLGRAGKL---DDMVKLIHEMNCKPDVVTW 326
+ + M + GI Y ++D L +AG L + K++ E N P+VVT+
Sbjct: 309 IYRHALALYSQMV-VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 327 RTLLDACRAHRNVDLATYAAKEILKLDA-EDTGAYVLLSNTYANSKMWNDVAEVRRTM 383
L+D ++ A + ++L+ + Y + N Y M + + R M
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 171/367 (46%), Gaps = 38/367 (10%)
Query: 8 LEEAQVVFDEMPER----NVVSWTTMISAYSSVKLNDRAMKLLVFMLREGVMPNMFTFSS 63
L A+ + +M E+ NVV++++MI+ Y + + A+ LL M + V+PN FT+ +
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 64 VL----RACEYLSDIKQIHSSILKVGLESDVFVRSALIDVYSKLGELLEALSVFKEM--- 116
V+ +A + I ++ + +G+E + ++ AL++ ++G + E + K+M
Sbjct: 440 VIDGLFKAGKEEMAI-ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Query: 117 -VTGDRVVWNSIIAAFAQHSDGDEALYLYKKMRRAGFPADQSTLTSVLRACTGMSLLELG 175
VT D++ + S+I F + D + AL ++M+ G P D + ++ +L+ G
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG-----MLKFG 553
Query: 176 RQAHVHVLK------FDQDLILHNALLDMYCKCGSLEDAKFIFNRM----VVKDVISWST 225
+ K + D+ N +++ K G E ++++M + ++S +
Sbjct: 554 KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613
Query: 226 MIAGLAQNGFSLEALKLFDSMKVMGPRPNYITILGVLFACSHAGLVDDGWHYFRSMKNL- 284
++ L +NG EA+ + + M +M PN T L S D F++ + L
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD---AIFKTHETLL 670
Query: 285 -YGIDPGREHYGCMLDLLGRAGKLDDMVKLIHEMNCK---PDVVTWRTLLDA--CRAHRN 338
YGI R+ Y ++ L + G ++ +M + PD VT+ +L+ +H
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 339 VDLATYA 345
L+TY+
Sbjct: 731 KALSTYS 737