Miyakogusa Predicted Gene

Lj4g3v0286110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0286110.2 Non Chatacterized Hit- tr|I1J7E5|I1J7E5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,36.13,6e-16,SURNod19,Stress up-regulated Nod 19,CUFF.46821.2
         (438 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   487   e-138

>AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Stress up-regulated Nod 19 (InterPro:IPR011692); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:24834505-24836223
           REVERSE LENGTH=475
          Length = 475

 Score =  487 bits (1253), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/443 (55%), Positives = 311/443 (70%), Gaps = 26/443 (5%)

Query: 6   RNFVLSLALL---LATCSGILGRTENNIKTAVFLSPKFELGAGSVINRYYYGIDFPRGHI 62
           R+ +L L LL   ++   G LG TE  IK+AVF SPK  +  GSV N Y + IDFPRGHI
Sbjct: 8   RSMILCLVLLSLSISPSQGFLG-TEEKIKSAVFYSPKLVMNPGSVANPYLFDIDFPRGHI 66

Query: 63  AMKSFNAEVIDEAGNPVPLHETYLHHWVVARYHQSK------KHVTTHTDKSYDNGHRML 116
            +K+F+AEV+DEAG PVPLHETYLHHW+V  Y+  K      + +  +   S ++    L
Sbjct: 67  GLKAFDAEVVDEAGKPVPLHETYLHHWIVEPYYVRKGSKLPQREMFRNHGFSREDPESNL 126

Query: 117 HESDDFVMVRNNGICQRNVLGQYYGLGSETRGTATHIPDPFGIEVGNPEEIPEGYEEKWL 176
               D ++V+N G+C+   L  ++GLGSETR T+T++PDP+ IE+GNPEE P+GYE KWL
Sbjct: 127 DSKSDIILVKNGGLCRSLTLRHFFGLGSETRETSTYVPDPYAIEIGNPEETPDGYEFKWL 186

Query: 177 LNVHAIDTRGVEDKLGCTECRCDLYNVTKDEYDRPLRPDYVGGLLCCYDYTQCKLREGFE 236
           LN+HAIDTRGVEDK GC EC CDLYNVT DEY R +RP Y GGL CCYD TQC+++ GF+
Sbjct: 187 LNIHAIDTRGVEDKKGCIECLCDLYNVTIDEYGRAIRPGYKGGLYCCYDKTQCRVKSGFD 246

Query: 237 VESTRRSLYLRYTVKWVEWDKFVVPVKIYILDVTDTLKISDDSKGVTSSDHNCVVEYEVE 296
                R+LYL+YTV+WV+WD  V+P K+YI DVTD+    + SKG  S +H C VEYEV+
Sbjct: 247 NGEKTRTLYLKYTVRWVDWDSSVLPAKVYIFDVTDSW---ERSKG-DSQEHICHVEYEVK 302

Query: 297 PCSTDHKGGNGCHHVKRTSLPMQTGGYVIYGVAHQHSGGIGSTLYGQDGRVICSSMPSYG 356
           PC T+   G+GC  VK+ SL M   GY++YGVAHQH+GGIG  LY ++G  IC+SMP YG
Sbjct: 303 PCKTN---GDGCVDVKKKSLVMPFDGYIVYGVAHQHAGGIGGALYRENGEGICASMPKYG 359

Query: 357 SGKEAGNEAGYIVGMSTCYPQPGSVKVFDGETVTLESNYSSSQRHSGVMGLFYLLVAEQL 416
           +G E GNEAGYIVGMS+CYP    VKV  GET+TLESNYS++  H+GVMGLFY+LVA+QL
Sbjct: 360 NGDEPGNEAGYIVGMSSCYPA-DPVKVSYGETLTLESNYSNAVGHTGVMGLFYILVAQQL 418

Query: 417 PH--------QHFIHSTRSSFFV 431
           P         QHF    RS  F+
Sbjct: 419 PEPDSSLPNKQHFEAPARSLSFL 441