Miyakogusa Predicted Gene

Lj4g3v0286110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0286110.1 Non Chatacterized Hit- tr|I1J7E5|I1J7E5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.04,5e-16,SURNod19,Stress up-regulated Nod 19;
seg,NULL,CUFF.46821.1
         (436 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   453   e-127

>AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Stress up-regulated Nod 19 (InterPro:IPR011692); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:24834505-24836223
           REVERSE LENGTH=475
          Length = 475

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/420 (53%), Positives = 290/420 (69%), Gaps = 24/420 (5%)

Query: 26  TENNIKSAVFLSPKFELGAGSVINRYYYDIDFPRGHIALKSFNAEVIDEAGNPVPLHETY 85
           TE  IKSAVF SPK  +  GSV N Y +DIDFPRGHI LK+F+AEV+DEAG PVPLHETY
Sbjct: 30  TEEKIKSAVFYSPKLVMNPGSVANPYLFDIDFPRGHIGLKAFDAEVVDEAGKPVPLHETY 89

Query: 86  LHHWVVERYHQSK--HVTQKDT------KYDDGHRMLQESDDFVIVRNSGICQNNALSQY 137
           LHHW+VE Y+  K   + Q++         +D    L    D ++V+N G+C++  L  +
Sbjct: 90  LHHWIVEPYYVRKGSKLPQREMFRNHGFSREDPESNLDSKSDIILVKNGGLCRSLTLRHF 149

Query: 138 YGLGSETRGTATDIPDPFGIEVGNPDEIPEGYEEKWMLNVHAIDTRGVEDKLGCTECRCD 197
           +GLGSETR T+T +PDP+ IE+GNP+E P+GYE KW+LN+HAIDTRGVEDK GC EC CD
Sbjct: 150 FGLGSETRETSTYVPDPYAIEIGNPEETPDGYEFKWLLNIHAIDTRGVEDKKGCIECLCD 209

Query: 198 LYNVTKDEHDRPLRPDYVGGLLCCYDYSQCKLREGFEVESTKRSLYLRYTVKWVEWDNFV 257
           LYNVT DE+ R +RP Y GGL CCYD +QC+++ GF+     R+LYL+YTV+WV+WD+ V
Sbjct: 210 LYNVTIDEYGRAIRPGYKGGLYCCYDKTQCRVKSGFDNGEKTRTLYLKYTVRWVDWDSSV 269

Query: 258 VPVKIYIIDVTDTLKISDESKGITSSDHNCVVEYEVEPCSTDHKDGNGCHHVKRTSLPMQ 317
           +P K+YI DVTD+    + SKG  S +H C VEYEV+PC T   +G+GC  VK+ SL M 
Sbjct: 270 LPAKVYIFDVTDSW---ERSKG-DSQEHICHVEYEVKPCKT---NGDGCVDVKKKSLVMP 322

Query: 318 TGGYVIYGVAHQHSGAVGSTLYGQDGRVICSSVPSYXXXXXXXXXXXYIVGMSTCYPHPG 377
             GY++YGVAHQH+G +G  LY ++G  IC+S+P Y           YIVGMS+CYP   
Sbjct: 323 FDGYIVYGVAHQHAGGIGGALYRENGEGICASMPKYGNGDEPGNEAGYIVGMSSCYP-AD 381

Query: 378 SVKILDGETVTIESNYSSSQRHTGVMGFFYLLVAEQLPH--------QHIIHSTRSSFFM 429
            VK+  GET+T+ESNYS++  HTGVMG FY+LVA+QLP         QH     RS  F+
Sbjct: 382 PVKVSYGETLTLESNYSNAVGHTGVMGLFYILVAQQLPEPDSSLPNKQHFEAPARSLSFL 441