Miyakogusa Predicted Gene

Lj4g3v0258680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0258680.1 Non Chatacterized Hit- tr|G7JFG1|G7JFG1_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,82.83,0,NAD(P)-binding Rossmann-fold domains,NULL; PUTATIVE
UDP-GALACTOSE 4-EPIMERASE,NULL; NAD DEPENDENT EP,CUFF.46769.1
         (297 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34460.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   399   e-111
AT3G18890.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   120   1e-27
AT2G37660.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    70   2e-12
AT4G31530.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    64   8e-11
AT4G31530.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    63   2e-10
AT5G02240.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    61   1e-09
AT4G18810.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    58   9e-09
AT4G18810.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    57   1e-08
AT3G46780.1 | Symbols: PTAC16 | plastid transcriptionally active...    54   9e-08
AT2G33590.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    48   6e-06
AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold super...    48   6e-06
AT1G72640.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    48   9e-06

>AT2G34460.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:14529635-14530732 FORWARD LENGTH=280
          Length = 280

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/279 (69%), Positives = 235/279 (84%), Gaps = 12/279 (4%)

Query: 20  HQTNLFTATSSITTKSLSVLSFA--KMEGSEQVAGKSGEEDLSVK-KKIFVAGATGSTGK 76
           H + +F + SS  TK+ S  SF   KME         GE + +VK KK+FVAGATG TGK
Sbjct: 9   HSSAVFFSQSSFFTKNKSFRSFTSIKME--------KGEAENAVKTKKVFVAGATGQTGK 60

Query: 77  RIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVTEGSDKLAEVIGDDSEAVV 136
           RIVEQLL++GFAVKAGVRD++K +++    +PSLQIV+ADVTEG DKLAEVIGDDS+AV+
Sbjct: 61  RIVEQLLSRGFAVKAGVRDVEKAKTSFKD-DPSLQIVRADVTEGPDKLAEVIGDDSQAVI 119

Query: 137 CATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYIF 196
           CATGFRPG+D+  PWKVDNFGTVNLV+ACRK+ + +F+LVSSILVNGAAMGQ+LNPAY+F
Sbjct: 120 CATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLF 179

Query: 197 LNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHV 256
           LN+FGLTLVAKLQAE +I+KSGINYTI+RPGGL+NDPPTGNVVMEPEDTL +GSISRD V
Sbjct: 180 LNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEPEDTLYEGSISRDLV 239

Query: 257 AEVAVEALACPEASYKVVEIVSRPDAPKRTYHDLFGSIR 295
           AEVAVEAL   E+S+KVVEIV+R +APKR+Y DLF S++
Sbjct: 240 AEVAVEALLQEESSFKVVEIVARAEAPKRSYKDLFASVK 278


>AT3G18890.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr3:6511169-6514729 FORWARD LENGTH=641
          Length = 641

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 46/271 (16%)

Query: 54  SGEEDLSVKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSS-------- 105
           S EEDL     +FVAGATG  G R V +LL  GF V+AGVR   +  S + S        
Sbjct: 78  SKEEDL-----VFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQN 132

Query: 106 ----TNP--SLQIVKADVTEGSDKLAEVIGDDSEAVVCATGF--RPGWDLLAPWKVDNFG 157
               T P   L+IV+ D+ E  D +   +G+ S  ++C  G   +   D+  P+++D   
Sbjct: 133 TDEGTQPVEKLEIVECDL-EKKDSIQPALGNAS-VIICCIGASEKEISDITGPYRIDYLA 190

Query: 158 TVNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKS 217
           T NLV+A    K+N FILV+S+  N         PA I LN+F   L  K +AE  + +S
Sbjct: 191 TKNLVDAATSAKVNNFILVTSLGTNKFGF-----PAAI-LNLFWGVLCWKRKAEEALIES 244

Query: 218 GINYTIIRPGGLRNDPPTG------NVVMEPEDTLSQGSISRDHVAEVAVEALAC----P 267
           G+NY I+RPGG+    PT       N+ +  +DTL  G +S   VAE+    LAC    P
Sbjct: 245 GLNYAIVRPGGMER--PTDAYKETHNLTLALDDTLFGGQVSNLQVAEL----LACMAKNP 298

Query: 268 EASY-KVVEIVSRPDAPKRTYHDLFGSIRQR 297
           + S+ K+VE+V+   AP      L   I  +
Sbjct: 299 QLSFSKIVEVVAETTAPLTPIEKLLEKIPSK 329


>AT2G37660.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:15795481-15796977 REVERSE LENGTH=325
          Length = 325

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 31/252 (12%)

Query: 65  IFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVTEGSDKL 124
           + V GA G TG+ + ++L  +     A  R L + + +    N   ++   D+ + +   
Sbjct: 79  VLVTGAGGRTGQIVYKKLKERSEQFVA--RGLVRTKESKEKINGEDEVFIGDIRDTASIA 136

Query: 125 AEVIGDDSEAVVCAT--GFRPGWDL-------------LAPWKVDNFGTVNLVEACRKRK 169
             V G D+  ++ +     +PG+D                P +VD  G  N ++A +   
Sbjct: 137 PAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAG 196

Query: 170 INRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGL 229
           + + +LV S+   G  +   LN +    N+    LV K +AE ++  SGI YTIIR GGL
Sbjct: 197 VKQIVLVGSM--GGTNINHPLN-SIGNANI----LVWKRKAEQYLADSGIPYTIIRAGGL 249

Query: 230 RN-DPPTGNVVMEPEDTLSQG---SISRDHVAEVAVEALACPEASYKVVEIVSRPDA--- 282
           ++ D     +++  +D L +    +I+R  VAEV V+AL   EA +K +++ S+P+    
Sbjct: 250 QDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGT 309

Query: 283 PKRTYHDLFGSI 294
           P + +  LF  +
Sbjct: 310 PTKDFKALFTQV 321


>AT4G31530.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:15282281-15284064 FORWARD LENGTH=324
          Length = 324

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 34/235 (14%)

Query: 82  LLAKGFAVKAGVRDLDKGRSALSSTNP-SLQIVKADVTEGSDKLAEVIGDDSEAVVCATG 140
           LL +    +  +RDLDK        +  SLQ+VK D T  ++ L   + +    V+C TG
Sbjct: 93  LLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGD-TRNAEDLDPSMFEGVTHVICTTG 151

Query: 141 FR--PG--WDLL-APWKVDNFGTVNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYI 195
               P   W+    P KVD  G  NL+ A     + R +LVSS+ V  +   +L    + 
Sbjct: 152 TTAFPSKRWNEENTPEKVDWEGVKNLISAL-PSSVKRVVLVSSVGVTKS--NEL---PWS 205

Query: 196 FLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGN---------------VVM 240
            +N+FG+ L  K   E+ +R SG+ +TIIRPG L + P T                 VV+
Sbjct: 206 IMNLFGV-LKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVI 264

Query: 241 EPEDTLSQGSISRDHVAEVAVEALACPEASYKVVEIVS-RPDAP---KRTYHDLF 291
              D L  G +SR  VAE  ++AL       K  EI S + D P    + + +LF
Sbjct: 265 GQGDNLV-GEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQWRELF 318


>AT4G31530.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:15282281-15284064 FORWARD LENGTH=338
          Length = 338

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 100/218 (45%), Gaps = 30/218 (13%)

Query: 82  LLAKGFAVKAGVRDLDKGRSALSSTNP-SLQIVKADVTEGSDKLAEVIGDDSEAVVCATG 140
           LL +    +  +RDLDK        +  SLQ+VK D T  ++ L   + +    V+C TG
Sbjct: 93  LLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGD-TRNAEDLDPSMFEGVTHVICTTG 151

Query: 141 FR--PG--WDLL-APWKVDNFGTVNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYI 195
               P   W+    P KVD  G  NL+ A     + R +LVSS+ V  +   +L    + 
Sbjct: 152 TTAFPSKRWNEENTPEKVDWEGVKNLISAL-PSSVKRVVLVSSVGVTKS--NEL---PWS 205

Query: 196 FLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGN---------------VVM 240
            +N+FG+ L  K   E+ +R SG+ +TIIRPG L + P T                 VV+
Sbjct: 206 IMNLFGV-LKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVI 264

Query: 241 EPEDTLSQGSISRDHVAEVAVEALACPEASYKVVEIVS 278
              D L  G +SR  VAE  ++AL       K  EI S
Sbjct: 265 GQGDNLV-GEVSRLVVAEACIQALDIEFTQGKAYEINS 301


>AT5G02240.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:451502-452984 FORWARD LENGTH=253
          Length = 253

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 41/260 (15%)

Query: 65  IFVAGATGSTGKRIVEQL-------LAKGFAVKAGVRDLDKGRSAL--------SSTNPS 109
           + V GA+G TG+ + ++L       +AKG    A  ++   G + +         S NP+
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66

Query: 110 LQIVKADVTEGSDKLAEVIGDDSEAVVCATGFRPGW---DLLAPWKVDNFGTVNLVEACR 166
            Q + A V      L   +           G RP +   D   P +VD  G  N ++A +
Sbjct: 67  FQGIDALVI-----LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121

Query: 167 KRKINRFILVSSILVNGAAMGQLLNPAYIFLNVFGL--TLVAKLQAENHIRKSGINYTII 224
              +   ++V S       MG   NP +  LN  G    LV K +AE ++  SG  YTII
Sbjct: 122 VAGVKHIVVVGS-------MGGT-NPDHP-LNKLGNGNILVWKRKAEQYLADSGTPYTII 172

Query: 225 RPGGLRN-DPPTGNVVMEPEDTLSQ---GSISRDHVAEVAVEALACPEASYKVVEIVSRP 280
           R GGL + +     +++  +D L Q    ++ R  VAEV ++AL   EA  K  ++ S+P
Sbjct: 173 RAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKP 232

Query: 281 DA---PKRTYHDLFGSIRQR 297
           +    P + +  LF  +  R
Sbjct: 233 EGTSTPTKDFKALFSQVTSR 252


>AT4G18810.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:10322263-10325735 REVERSE LENGTH=627
          Length = 627

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 202 LTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHVAEVAV 261
             L  KL+ E+ IR SGI + I+RP  L  +P   +++ E  D ++ G +SRD VA + +
Sbjct: 476 FILTYKLKGEDLIRDSGIPFAIVRPCALTEEPAGADLIFEQGDNIT-GKVSRDEVARICI 534

Query: 262 EALACPEASYKVVEI-----VSRP-------DAPKRTYHDLFGSIR 295
            AL  P A  K  E+      S P         P++ Y++ F +++
Sbjct: 535 AALESPYALNKTFEVKSTVPFSEPFTVDPENPPPEKDYNEYFKTLK 580


>AT4G18810.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr4:10322622-10325735 REVERSE LENGTH=596
          Length = 596

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 13/106 (12%)

Query: 202 LTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHVAEVAV 261
             L  KL+ E+ IR SGI + I+RP  L  +P   +++ E  D ++ G +SRD VA + +
Sbjct: 476 FILTYKLKGEDLIRDSGIPFAIVRPCALTEEPAGADLIFEQGDNIT-GKVSRDEVARICI 534

Query: 262 EALACPEASYKVVEI-----VSRP-------DAPKRTYHDLFGSIR 295
            AL  P A  K  E+      S P         P++ Y++ F +++
Sbjct: 535 AALESPYALNKTFEVKSTVPFSEPFTVDPENPPPEKDYNEYFKTLK 580


>AT3G46780.1 | Symbols: PTAC16 | plastid transcriptionally active 16
           | chr3:17228766-17231021 FORWARD LENGTH=510
          Length = 510

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 47/262 (17%)

Query: 65  IFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVT------ 118
           IFVAGATG  G RI + LL +GF+V+AGV DL   +  L+    + +I+  D        
Sbjct: 94  IFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQD-LARVAATYKILSNDEVKRLNAV 152

Query: 119 ----EGSDKLAEVIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINRFI 174
               + ++ +A+ IG+ ++ VV       G D     +V     + +V+A     ++   
Sbjct: 153 QSPFQDAESIAKAIGNATKVVVTVGATENGPDA----QVSTSDALLVVQAAELAGVSHVA 208

Query: 175 LVSSILVNGAAMGQLLNPAYIFLNVFG----LTLVAKLQAENHIRKSGINYTIIRPGGLR 230
           +V    ++G+    L      F N+F     LT+   ++    + ++ + YT+I+     
Sbjct: 209 IVYDGTISGSTYNVLDGITSFFGNLFAKSQPLTISDLIE---KVAQTDVAYTLIKTSLTE 265

Query: 231 NDPPTG--NVVMEPEDT----------------LSQGSISRDHVAEVAVEALACPEASYK 272
           +  P    NVV+  E +                L   S+  D  A  AV       A  K
Sbjct: 266 DFSPEKAYNVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAV-------AENK 318

Query: 273 VVEIVSRPDAPKRTYHDLFGSI 294
           VVE+ + P AP R   +LF  I
Sbjct: 319 VVEVSTDPSAPSRPVDELFSVI 340


>AT2G33590.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:14224622-14226365 FORWARD LENGTH=321
          Length = 321

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)

Query: 62  KKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSA----LSSTNPSLQIVKADV 117
           K K+ V GA G  G  +V+ LL+K + V   VRD D  + A    L      L++ KAD+
Sbjct: 6   KGKVCVTGAGGFLGSWVVDLLLSKDYFVHGTVRDPDNEKYAHLKKLEKAGDKLKLFKADL 65

Query: 118 TEGSDKLAEVIGDDSE-AVVC----ATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINR 172
            +     + + G      V C    A+   P  +L+AP  VD  GT+N+++AC +  + R
Sbjct: 66  LDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAP-AVD--GTLNVLKACIEANVKR 122

Query: 173 FILVSSILVNGAAMGQLLNPAY 194
            + VSS+          +NP +
Sbjct: 123 VVYVSSV------AAAFMNPMW 138


>AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold
           superfamily protein | chr5:6220872-6222125 REVERSE
           LENGTH=417
          Length = 417

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)

Query: 65  IFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLD--KGRSALSSTNPSLQ---IVKADVTE 119
           + V G+TG  G+ +V++++ +GF V A  R+    +G++    T   LQ   +  +DVTE
Sbjct: 86  VLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIRGKNDKEETLKQLQGANVCFSDVTE 145

Query: 120 GS--DKLAEVIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINRFILVS 177
               +K  E +G   + VV     R G  +   WK+D   T N + A +K     F+L+S
Sbjct: 146 LDVLEKSIENLGFGVDVVVSCLASRNG-GIKDSWKIDYEATKNSLVAGKKFGAKHFVLLS 204

Query: 178 SILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRP 226
           +I V          P   F     L   A+L      + S   Y+I+RP
Sbjct: 205 AICVQ--------KPLLEFQRA-KLKFEAELMDLAEQQDSSFTYSIVRP 244


>AT1G72640.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:27346409-27348147 REVERSE LENGTH=312
          Length = 312

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 31/211 (14%)

Query: 56  EEDLSVKKKI-FVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVK 114
           E+DL  +K + FV       G+ I+ QL+ KG  VKA V+D    R AL +    +++  
Sbjct: 96  EDDLDGEKDVVFVTDGDSDLGQMIILQLIVKGTRVKALVKD---KRKALEAFGSYVELT- 151

Query: 115 ADVTEGSDKLAEVIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINRFI 174
                         GD S+       F+    +++P +    G +++V++ R   +   +
Sbjct: 152 -------------TGDASDERFLKKAFKGVGAVISPTE----GFLSIVKSFRG--VKHAV 192

Query: 175 LVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPP 234
           L+S + V  ++ G         +N     L    Q EN    S + YTIIR G L N P 
Sbjct: 193 LLSQLSVYESSGG-----IQAMMNSKAKKLAE--QDENAAISSNVPYTIIRTGKLENSPG 245

Query: 235 TGNVVMEPEDTLSQGSISRDHVAEVAVEALA 265
                       ++GSIS++  A + VEAL+
Sbjct: 246 GSQGFNFSAGAAAKGSISKEDAARICVEALS 276