Miyakogusa Predicted Gene

Lj4g3v0258640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0258640.2 Non Chatacterized Hit- tr|I3SUK1|I3SUK1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.5,0,FAMILY NOT
NAMED,NULL; no description,NULL; cobW,CobW/HypB/UreG domain; P-loop
containing nucleoside,CUFF.46766.2
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34470.2 | Symbols: UREG, PSKF109 | urease accessory protein ...   305   1e-83
AT2G34470.1 | Symbols: UREG, PSKF109 | urease accessory protein ...   305   1e-83

>AT2G34470.2 | Symbols: UREG, PSKF109 | urease accessory protein G |
           chr2:14530900-14532411 REVERSE LENGTH=276
          Length = 276

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 144/162 (88%), Positives = 154/162 (95%)

Query: 41  GSDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGT 100
           G  S+VG DGKVYHSHDGLAPHSHEPIYSPG+F+RRAPPL +R+F+ERAFT+GIGGPVGT
Sbjct: 26  GKASWVGKDGKVYHSHDGLAPHSHEPIYSPGYFSRRAPPLHDRNFSERAFTVGIGGPVGT 85

Query: 101 GKTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIR 160
           GKTALMLALC FLRD YSLAAVTNDIFTKEDGEFLV+N ALPEERIRAVETGGCPHAAIR
Sbjct: 86  GKTALMLALCRFLRDKYSLAAVTNDIFTKEDGEFLVKNGALPEERIRAVETGGCPHAAIR 145

Query: 161 EDISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
           EDISINLGPLEELSNL+K D+LLCESGGDNLAANFSRELADY
Sbjct: 146 EDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADY 187


>AT2G34470.1 | Symbols: UREG, PSKF109 | urease accessory protein G |
           chr2:14530900-14532411 REVERSE LENGTH=275
          Length = 275

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 144/162 (88%), Positives = 154/162 (95%)

Query: 41  GSDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGT 100
           G  S+VG DGKVYHSHDGLAPHSHEPIYSPG+F+RRAPPL +R+F+ERAFT+GIGGPVGT
Sbjct: 25  GKASWVGKDGKVYHSHDGLAPHSHEPIYSPGYFSRRAPPLHDRNFSERAFTVGIGGPVGT 84

Query: 101 GKTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIR 160
           GKTALMLALC FLRD YSLAAVTNDIFTKEDGEFLV+N ALPEERIRAVETGGCPHAAIR
Sbjct: 85  GKTALMLALCRFLRDKYSLAAVTNDIFTKEDGEFLVKNGALPEERIRAVETGGCPHAAIR 144

Query: 161 EDISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
           EDISINLGPLEELSNL+K D+LLCESGGDNLAANFSRELADY
Sbjct: 145 EDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADY 186