Miyakogusa Predicted Gene

Lj4g3v0254380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0254380.1 Non Chatacterized Hit- tr|I1KRG7|I1KRG7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,88.37,6e-17,SUBFAMILY NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NULL; DUF616,Protein of unknown function
DUF61,gene.Ljchr4_pseudomol_20120830.path1.gene579.1
         (82 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46220.1 | Symbols:  | Protein of unknown function (DUF616) |...    77   2e-15

>AT5G46220.1 | Symbols:  | Protein of unknown function (DUF616) |
           chr5:18738827-18741964 FORWARD LENGTH=462
          Length = 462

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/41 (75%), Positives = 38/41 (92%)

Query: 1   MEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPY 41
           MEEAMATARWKKW D++ L++QMETYCE+GL+PW+ SKLPY
Sbjct: 299 MEEAMATARWKKWGDVDGLRIQMETYCEHGLKPWSSSKLPY 339