Miyakogusa Predicted Gene
- Lj4g3v0254260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0254260.1 Non Chatacterized Hit- tr|I3SHP0|I3SHP0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; ATPASE, AAA FAMILY
P,NODE_52760_length_491_cov_142.425659.path2.1
(141 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 187 2e-48
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 187 2e-48
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 120 4e-28
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 107 4e-24
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 96 9e-21
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 94 3e-20
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 94 3e-20
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 87 4e-18
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 87 5e-18
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 85 2e-17
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 80 4e-16
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 80 6e-16
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 80 7e-16
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 79 1e-15
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 78 2e-15
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 78 3e-15
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 77 3e-15
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 77 5e-15
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 76 6e-15
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 76 7e-15
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 76 7e-15
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 76 7e-15
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 76 8e-15
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 73 7e-14
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 72 9e-14
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 71 3e-13
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 70 4e-13
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 70 4e-13
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 69 1e-12
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 66 6e-12
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 66 1e-11
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 64 2e-11
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 64 3e-11
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 62 1e-10
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 62 1e-10
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 62 1e-10
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 62 1e-10
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 62 1e-10
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 62 2e-10
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 62 2e-10
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 60 3e-10
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 60 3e-10
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 58 2e-09
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 58 2e-09
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 58 3e-09
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 58 3e-09
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 57 3e-09
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 57 3e-09
AT1G08270.1 | Symbols: | CONTAINS InterPro DOMAIN/s: MIT (Inter... 57 4e-09
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 57 4e-09
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 57 5e-09
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 56 1e-08
AT1G08270.2 | Symbols: | CONTAINS InterPro DOMAIN/s: MIT (Inter... 55 2e-08
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 54 2e-08
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 54 3e-08
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 54 3e-08
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 54 4e-08
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 52 1e-07
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 52 1e-07
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 50 6e-07
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 49 7e-07
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 49 2e-06
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 96/103 (93%)
Query: 39 NNMDERPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMP 98
N + E+P+KS+ PPFESAE RTLAESLSRDIIRG+P++KWESIKGLENAK+LLKEAVVMP
Sbjct: 63 NVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMP 122
Query: 99 IKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 141
IKYP YF GLL+PWKGILLFGPPGTGKTMLAKAVATEC TTFF
Sbjct: 123 IKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFF 165
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 96/103 (93%)
Query: 39 NNMDERPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMP 98
N + E+P+KS+ PPFESAE RTLAESLSRDIIRG+P++KWESIKGLENAK+LLKEAVVMP
Sbjct: 72 NVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMP 131
Query: 99 IKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 141
IKYP YF GLL+PWKGILLFGPPGTGKTMLAKAVATEC TTFF
Sbjct: 132 IKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFF 174
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%)
Query: 61 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 120
LA L RD++ +P V+W+ + GL AKRLL+EAVV+P+ P+YF G+ PWKG+L+FGP
Sbjct: 221 LAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGP 280
Query: 121 PGTGKTMLAKAVATECKTTFF 141
PGTGKT+LAKAVATEC TTFF
Sbjct: 281 PGTGKTLLAKAVATECGTTFF 301
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 63/85 (74%)
Query: 57 EMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGIL 116
E L L+ I+R P++KW + GLE+AK+ L+EAV++P+K+P++FTG PW+ L
Sbjct: 110 EQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFL 169
Query: 117 LFGPPGTGKTMLAKAVATECKTTFF 141
L+GPPGTGK+ LAKAVATE +TFF
Sbjct: 170 LYGPPGTGKSYLAKAVATEADSTFF 194
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 61 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 120
L E +S +I+ P+V+W+ I GLE+AK+ + E V+ P+ P F G SP KG+LLFGP
Sbjct: 181 LIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGP 240
Query: 121 PGTGKTMLAKAVATECKTTFF 141
PGTGKTM+ KA+A E K TFF
Sbjct: 241 PGTGKTMIGKAIAGEAKATFF 261
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 61 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 120
L E ++ I+ SP VKW+ + GL AK+ L E V++P K FTGL P +G+LLFGP
Sbjct: 198 LVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGP 257
Query: 121 PGTGKTMLAKAVATECKTTFF 141
PG GKTMLAKAVA+E + TFF
Sbjct: 258 PGNGKTMLAKAVASESQATFF 278
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 61 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 120
L E ++ I+ SP VKW+ + GL AK+ L E V++P K FTGL P +G+LLFGP
Sbjct: 202 LVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGP 261
Query: 121 PGTGKTMLAKAVATECKTTFF 141
PG GKTMLAKAVA+E + TFF
Sbjct: 262 PGNGKTMLAKAVASESQATFF 282
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 67 RDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGK 125
R+ + P+V WE I GLEN KR L+E V P+++P+ F +SP KG+L +GPPG GK
Sbjct: 468 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527
Query: 126 TMLAKAVATECKTTFF 141
T+LAKA+A EC+ F
Sbjct: 528 TLLAKAIANECQANFI 543
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
+V ++ + G+ ++E V +P+++P+ F + + P KGILL+GPPG+GKT++A+AVA
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 134 TECKTTFF 141
E FF
Sbjct: 263 NETGAFFF 270
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 67 RDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGK 125
R+ + P+V WE I GLEN KR L+E V P+++P+ F +SP KG+L +GPPG GK
Sbjct: 469 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
Query: 126 TMLAKAVATECKTTFF 141
T+LAKA+A EC+ F
Sbjct: 529 TLLAKAIANECQANFI 544
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
+V ++ + G+ ++E V +P+++P+ F + + P KGILL+GPPG+GKT++A+AVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 134 TECKTTFF 141
E FF
Sbjct: 264 NETGAFFF 271
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 67 RDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGK 125
R+ + P+V W I GLEN KR L+E V P+++P+ F +SP KG+L +GPPG GK
Sbjct: 468 RETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527
Query: 126 TMLAKAVATECKTTFF 141
T+LAKA+A EC+ F
Sbjct: 528 TLLAKAIANECQANFI 543
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
DV ++ + G+ ++E V +P+++P+ F + + P KGILL+GPPG+GKT++A+AVA
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 134 TECKTTFF 141
E FF
Sbjct: 263 NETGAFFF 270
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 72 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLA 129
G VK++ I LE+ K+ L E V++P++ P+ FT LL P KGILLFGPPGTGKT+LA
Sbjct: 697 GEIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLA 756
Query: 130 KAVATECKTTFF 141
KA+ATE F
Sbjct: 757 KALATEAGANFI 768
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 72 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLA 129
G VK+E I LE+ K+ L E V++P++ P+ F LL P KGILLFGPPGTGKT+LA
Sbjct: 685 GEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLA 744
Query: 130 KAVATECKTTFF 141
KA+ATE F
Sbjct: 745 KALATEAGANFI 756
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 72 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLA 129
G VK+E I LE+ K+ L E V++P++ P+ F LL P KGILLFGPPGTGKT+LA
Sbjct: 707 GEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLA 766
Query: 130 KAVATECKTTFF 141
KA+ATE F
Sbjct: 767 KALATEAGANFI 778
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLAKAV 132
DV++ SI GLE+ K+ L E V++P+K P+ F LL P KG+LL+GPPGTGKTMLAKA+
Sbjct: 83 DVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 142
Query: 133 ATECKTTFF 141
A E + F
Sbjct: 143 ARESEAVFI 151
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLAKAVA 133
V ++ I LEN K LKE V++P++ P+ F L P KGILLFGPPGTGKTMLAKAVA
Sbjct: 960 VSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1019
Query: 134 TECKTTFF 141
TE F
Sbjct: 1020 TEAGANFI 1027
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 74 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 133
P+VKW+ + GLE+ K + + V +P+ + F+ L G+LL+GPPGTGKT+LAKAVA
Sbjct: 653 PNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 712
Query: 134 TECKTTFF 141
TEC F
Sbjct: 713 TECSLNFL 720
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 65 LSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFGPPG 122
LS I+ DV ++ I LE K +LKE V++P++ P+ F L P KGILLFGPPG
Sbjct: 806 LSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPG 865
Query: 123 TGKTMLAKAVATECKTTFF 141
TGKTMLAKAVA E F
Sbjct: 866 TGKTMLAKAVAKEADANFI 884
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLAKAV 132
DV++ SI GLE K+ L E V++P+K P+ F LL P KG+LL+GPPGTGKTMLAKA+
Sbjct: 80 DVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 139
Query: 133 ATECKTTFF 141
A E F
Sbjct: 140 AKESGAVFI 148
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFGPPGTGKTMLAKAVA 133
V + I LEN K LKE V++P++ P+ F L P KGILLFGPPGTGKTMLAKAVA
Sbjct: 941 VSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1000
Query: 134 TECKTTFF 141
TE F
Sbjct: 1001 TEAGANFI 1008
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFGPPGTGKTMLAKAVA 133
V + I LEN K LKE V++P++ P+ F L P KGILLFGPPGTGKTMLAKAVA
Sbjct: 941 VSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1000
Query: 134 TECKTTFF 141
TE F
Sbjct: 1001 TEAGANFI 1008
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVA 133
+V ++ I L+ K L+E V++P++ P FTG LL P +GILLFGPPGTGKTMLAKA+A
Sbjct: 515 NVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIA 574
Query: 134 TECKTTFF 141
E +F
Sbjct: 575 KEAGASFI 582
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVA 133
+V ++ I L+ K L+E V++P++ P FTG LL P +GILLFGPPGTGKTMLAKA+A
Sbjct: 517 NVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIA 576
Query: 134 TECKTTFF 141
E +F
Sbjct: 577 KEAGASFI 584
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVA 133
+V ++ I L+ K L+E V++P++ P FTG LL P +GILLFGPPGTGKTMLAKA+A
Sbjct: 512 NVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIA 571
Query: 134 TECKTTFF 141
E +F
Sbjct: 572 KEAGASFI 579
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVAT 134
V + I L+ K L+E V++P++ P F G LL P +GILLFGPPGTGKTMLAKA+A
Sbjct: 514 VTFADIGSLDETKDSLQELVMLPLRRPDLFQGGLLKPCRGILLFGPPGTGKTMLAKAIAN 573
Query: 135 ECKTTFF 141
E +F
Sbjct: 574 EAGASFI 580
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVAT 134
V + I L+ K L+E V++P++ P F G LL P +GILLFGPPGTGKTM+AKA+A
Sbjct: 515 VTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIAN 574
Query: 135 ECKTTFF 141
E +F
Sbjct: 575 EAGASFI 581
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFGPPGTGKTMLAKAVA 133
V ++ I LEN K LKE V++P ++P+ F L P GILLFGP GTGKTMLAKAVA
Sbjct: 750 VTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVA 809
Query: 134 TE 135
TE
Sbjct: 810 TE 811
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 74 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 132
PD ++ I GL+ + +KE + +PIK+P+ F L ++ KG+LL+GPPGTGKT+LA+AV
Sbjct: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
Query: 133 ATECKTTFF 141
A TF
Sbjct: 216 AHHTDCTFI 224
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 74 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 132
PD ++ I GL+ + +KE + +PIK+P+ F L ++ KG+LL+GPPGTGKT+LA+AV
Sbjct: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
Query: 133 ATECKTTFF 141
A TF
Sbjct: 216 AHHTDCTFI 224
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 48 SLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG 107
+LPP + + L++S PDV + I G + K+ ++EAV +P+ + + +
Sbjct: 131 DVLPPEADSSISLLSQS-------EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQ 183
Query: 108 L-LSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 141
+ + P +G+LL+GPPGTGKTMLAKAVA F
Sbjct: 184 IGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFI 218
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 16/116 (13%)
Query: 32 HTNDVSPNNMDERPQKSLLPPFESAE-MRTLAESLSRDIIRGSPDV-------------K 77
H+ND ++ E +K E E ++ ++ L RD++R +P+
Sbjct: 659 HSNDAWRKDV-EAEEKWFEKCGEDEEFLKRESKRLHRDLLRVAPEYIGGSDSESGKAFEG 717
Query: 78 WESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 132
W+S+ GLE + +KE V++P+ YP++F L L+P +GILL G PGTGKT++ +A+
Sbjct: 718 WDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 53 FESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSP 111
FE+A+ + + S R++I P V WE + G K L EAV P K+ F + P
Sbjct: 699 FENAKTK-IRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRP 757
Query: 112 WKGILLFGPPGTGKTMLAKAVATECKTTFF 141
GIL+FGPPG KT++A+AVA+E K F
Sbjct: 758 PSGILMFGPPGCSKTLMARAVASEAKLNFL 787
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 74 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 132
P + I GLE + L EA+V+P+ + + F L + P KG+LL+GPPGTGKT++A+A
Sbjct: 165 PTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARAC 224
Query: 133 ATECKTTFF 141
A + TF
Sbjct: 225 AAQTNATFL 233
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 74 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 132
P + I GLE + L EA+V+P+ + + F L + P KG+LL+GPPGTGKT++A+A
Sbjct: 166 PTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARAC 225
Query: 133 ATECKTTFF 141
A + TF
Sbjct: 226 AAQTNATFL 234
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ +P + I GLE + +KEAV +P+ +P+ + + + P KG++L+G PGTGKT+L
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238
Query: 129 AKAVATECKTTFF 141
AKAVA TF
Sbjct: 239 AKAVANSTSATFL 251
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ PDV + + G + ++E V +P+ +P+ F L + P KG+L +GPPGTGKT+L
Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
Query: 129 AKAVATECKTTFF 141
A+AVA F
Sbjct: 219 ARAVANRTDACFI 231
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ +P + I GLE + +KEAV +P+ +P+ + + + P KG++L+G PGTGKT+L
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238
Query: 129 AKAVATECKTTFF 141
AKAVA TF
Sbjct: 239 AKAVANSTSATFL 251
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
++ + ++ GL + R L+E++ +P+ P+ F + + P KG+LL+GPPGTGKT+LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 134 TECKTTFF 141
+ F
Sbjct: 195 SNIDANFL 202
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
++ + ++ GL + R L+E++ +P+ P+ F + + P KG+LL+GPPGTGKT+LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 134 TECKTTFF 141
+ F
Sbjct: 195 SNIDANFL 202
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 77 KWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVATE 135
K+ +KG++ AK L+E +V ++ PK FT L KG+LL GPPGTGKTMLA+A+A E
Sbjct: 225 KFSDVKGVDEAKAELEE-IVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGE 283
Query: 136 CKTTFF 141
FF
Sbjct: 284 AGVPFF 289
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
++ + ++ GL + R L+E++ +P+ P+ F + + P KG+LL+GPPGTGKT+LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 134 TECKTTFF 141
+ F
Sbjct: 195 SNIDANFL 202
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 64 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 122
S++R I P V W+ + GL++ K+ L++AV PIK+ F + +SP +GILL GPPG
Sbjct: 271 SINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPG 330
Query: 123 TGKTMLAKAVATECKTTFF 141
KT LAKA A + +FF
Sbjct: 331 CSKTTLAKAAANAAQASFF 349
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 77 KWES---IKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAV 132
KW + I G E A + L+E ++ P +YP L W +G+LL+GPPGTGKT L +AV
Sbjct: 17 KWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAV 76
Query: 133 ATEC 136
EC
Sbjct: 77 VQEC 80
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 75 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 133
D+ ++ I GL LKE V P+ YP++F ++P +G+LL GPPGTGKT++A+A+A
Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
Query: 134 TEC-----KTTFF 141
K +F+
Sbjct: 437 CAASKAGQKVSFY 449
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
V ++ + G++ AK+ E VV +K P+ FT + + KG+LL GPPGTGKT+LAKA+A
Sbjct: 224 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAG 282
Query: 135 ECKTTFF 141
E FF
Sbjct: 283 EAGVPFF 289
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ PD + I G + ++E V +P+ +P+ F L + P KG+L +GPPG+GKT++
Sbjct: 352 VEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLV 411
Query: 129 AKAVATECKTTFF 141
A+AVA F
Sbjct: 412 ARAVANRTGACFI 424
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ PD + I G + ++E V +P+ +P+ F L + P KG+L +GPPG+GKT++
Sbjct: 331 VEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLV 390
Query: 129 AKAVATECKTTFF 141
A+AVA F
Sbjct: 391 ARAVANRTGACFI 403
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ PD + I G + ++E V +P+ +P+ F L + P KG+L +GPPG+GKT++
Sbjct: 330 VEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLV 389
Query: 129 AKAVATECKTTFF 141
A+AVA F
Sbjct: 390 ARAVANRTGACFI 402
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
V ++ + G++ AK+ E VV +K P+ FT + + KG+LL GPPGTGKT+LAKA+A
Sbjct: 217 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 275
Query: 135 ECKTTFF 141
E FF
Sbjct: 276 EAGVPFF 282
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
+ +E + G++ AK+ +E +V +K P+ F+ L + KG+LL GPPGTGKT+LAKA+A
Sbjct: 221 ITFEDVAGVDEAKQDFEE-IVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAG 279
Query: 135 ECKTTFF 141
E FF
Sbjct: 280 EAGVPFF 286
>AT1G08270.1 | Symbols: | CONTAINS InterPro DOMAIN/s: MIT
(InterPro:IPR007330); BEST Arabidopsis thaliana protein
match is: AAA-type ATPase family protein
(TAIR:AT2G27600.1); Has 1133 Blast hits to 1133 proteins
in 252 species: Archae - 47; Bacteria - 0; Metazoa -
540; Fungi - 145; Plants - 223; Viruses - 0; Other
Eukaryotes - 178 (source: NCBI BLink). |
chr1:2606957-2607337 REVERSE LENGTH=126
Length = 126
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 57 EMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG 107
E L L+ IIR P+VKW + GLE+AK+ LKEAV++P+ +P++FTG
Sbjct: 71 EESKLRAGLNSAIIREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFFTG 121
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
+ +E + G++ AK+ +E +V +K P+ F+ L + KG+LL GPPGTGKT+LAKA+A
Sbjct: 219 ITFEDVAGVDEAKQDFEE-IVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAG 277
Query: 135 ECKTTFF 141
E FF
Sbjct: 278 EAGVPFF 284
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 67 RDIIRGSPD---VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK---GILLFGP 120
RDI + + + + WE + G+ + K +KE + +P K+PK F SP + +LL+GP
Sbjct: 829 RDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAK--SPLRLRSNVLLYGP 886
Query: 121 PGTGKTMLAKAVATECKTTFF 141
PG GKT + A A C F
Sbjct: 887 PGCGKTHIVGAAAAACSLRFI 907
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 78 WESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVATEC 136
++ +KG ++AK+ L+E VV +K P FT L KGILL G PGTGKT+LAKA+A E
Sbjct: 361 FKDVKGCDDAKQELEE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 419
Query: 137 KTTFF 141
FF
Sbjct: 420 GVPFF 424
>AT1G08270.2 | Symbols: | CONTAINS InterPro DOMAIN/s: MIT
(InterPro:IPR007330); BEST Arabidopsis thaliana protein
match is: AAA-type ATPase family protein
(TAIR:AT2G27600.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr1:2606848-2607337 REVERSE LENGTH=132
Length = 132
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 57 EMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG 107
E L L+ IIR P+VKW + GLE+AK+ LKEAV++P+ +P++FT
Sbjct: 71 EESKLRAGLNSAIIREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFFTA 121
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
V + + G + AK L+E VV +K P +T L + KG LL GPPGTGKT+LA+AVA
Sbjct: 259 VSFADVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 317
Query: 135 ECKTTFF 141
E FF
Sbjct: 318 EAGVPFF 324
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 53 FESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSP 111
FE A + + SL+R+ PDVKW+ + GL++ + +V PIK P + +
Sbjct: 503 FEEA-VNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDL 561
Query: 112 WKGILLFGPPGTGKTML 128
G LL+GPPG GKT++
Sbjct: 562 ETGFLLYGPPGCGKTLI 578
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 64 SLSRDIIRGSPDVKWESIKG-----LENAKRLLKEA---VVMPIKYPKYFTGL-LSPWKG 114
SLS G+ D++ E KG K++L E V+ PI P+ F + + P G
Sbjct: 210 SLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSG 269
Query: 115 ILLFGPPGTGKTMLAKAVATECKTTFF 141
IL GPPG GKT LA A+A E F+
Sbjct: 270 ILFHGPPGCGKTKLANAIANEAGVPFY 296
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 45 PQKSLLPPFESAEMRTLAESLSRDI-IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPK 103
P K + P + + +L +S ++ I V ++ G E KR L+E +V +K +
Sbjct: 281 PTKKIRQPLKRQALGSLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQE-IVRILKNDE 339
Query: 104 YFT--GLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 141
F G+ P KG+LL GPPGTGKT+LAKA+A E FF
Sbjct: 340 EFQNKGIYCP-KGVLLHGPPGTGKTLLAKAIAGEAGLPFF 378
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPW-KGILLFGPPGTGKTMLAKAVAT 134
V + + G + AK L+E VV +K P +T L + KG LL GPPGTGKT+LA+AVA
Sbjct: 247 VTFGDVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 305
Query: 135 ECKTTFF 141
E FF
Sbjct: 306 EAGVPFF 312
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE LENGTH=622
Length = 622
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 73 SPDVKWESIKGLENAKRLLKEAVVM---PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLA 129
+P V ++ ++G+++AK L E V I Y K G P +G+LL GPPGTGKT+LA
Sbjct: 328 NPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKL--GARLP-RGVLLVGPPGTGKTLLA 384
Query: 130 KAVATECKTTFF 141
+AVA E FF
Sbjct: 385 RAVAGEAGVPFF 396
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 70 IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTML 128
+ GS VK+ + G++ A L+E +V +K P F + + P G+LL GPPG GKT++
Sbjct: 421 VDGSTGVKFADVAGIDEAVDELQE-LVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLV 479
Query: 129 AKAVATECKTTFF 141
AKA+A E F+
Sbjct: 480 AKAIAGEAGVPFY 492
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 72 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKA 131
G + + + G++ AK L+E V KY P +G+LL G PGTGKT+LAKA
Sbjct: 318 GGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKA 377
Query: 132 VATECKTTFF 141
VA E + F
Sbjct: 378 VAGEAEVPFI 387
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 56 AEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--------G 107
A + L E L R + DVK+ + GL + L+E V K+FT G
Sbjct: 392 ASNKRLPEYLERGV-----DVKFTDVAGLGKIRLELEEIV-------KFFTHGEMYRRRG 439
Query: 108 LLSPWKGILLFGPPGTGKTMLAKAVATECKTTFF 141
+ P GILL GPPG GKT+LAKAVA E FF
Sbjct: 440 VKIP-GGILLCGPPGVGKTLLAKAVAGEAGVNFF 472
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 76 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVAT 134
+ + + G++ AK L+E +V +K P + L P +G+LL G PGTGKT+LAKAVA
Sbjct: 326 ITFADVAGVDEAKEELEE-IVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG 384
Query: 135 ECKTTFF 141
E F
Sbjct: 385 ESDVPFI 391