Miyakogusa Predicted Gene
- Lj4g3v0244050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0244050.1 Non Chatacterized Hit- tr|I1KRH6|I1KRH6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23857
PE,77.74,0,seg,NULL; ZF_PHD_1,Zinc finger, PHD-type, conserved site;
P-loop containing nucleoside triphosphate ,CUFF.46750.1
(2353 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 1867 0.0
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 558 e-158
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 498 e-140
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 484 e-136
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 441 e-123
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 364 e-100
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 363 1e-99
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 363 1e-99
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 362 2e-99
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 362 2e-99
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 352 1e-96
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 352 2e-96
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 329 2e-89
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 326 1e-88
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 318 3e-86
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 318 4e-86
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 317 5e-86
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 303 9e-82
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 282 2e-75
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 281 5e-75
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 268 4e-71
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 247 7e-65
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 232 2e-60
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 217 1e-55
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 216 2e-55
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 200 1e-50
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 191 5e-48
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 189 2e-47
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 189 2e-47
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 184 5e-46
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 181 5e-45
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 152 4e-36
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 152 4e-36
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 152 4e-36
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 147 6e-35
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 134 7e-31
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 120 2e-26
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 120 2e-26
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 115 3e-25
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 115 4e-25
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 111 5e-24
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 109 3e-23
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 102 4e-21
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 100 2e-20
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 99 3e-20
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 97 2e-19
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 96 4e-19
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 96 5e-19
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 94 9e-19
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 93 2e-18
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 93 2e-18
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 92 4e-18
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 90 2e-17
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 88 7e-17
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 86 3e-16
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 82 3e-15
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 72 6e-12
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 69 5e-11
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 67 1e-10
AT1G05380.2 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 66 4e-10
AT1G05380.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 66 4e-10
AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 64 1e-09
AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 62 4e-09
AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 62 5e-09
AT3G01460.1 | Symbols: MBD9, ATMBD9 | methyl-CPG-binding domain ... 62 5e-09
AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 61 1e-08
AT3G14980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 59 5e-08
AT5G12400.1 | Symbols: | DNA binding;zinc ion binding;DNA bindi... 58 7e-08
AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion binding... 58 7e-08
AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion binding... 58 8e-08
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 57 1e-07
AT5G22760.1 | Symbols: | PHD finger family protein | chr5:75716... 57 2e-07
AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 55 5e-07
AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 54 1e-06
AT5G58610.1 | Symbols: | PHD finger transcription factor, putat... 52 4e-06
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 1867 bits (4835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1099/2140 (51%), Positives = 1346/2140 (62%), Gaps = 167/2140 (7%)
Query: 5 KSSAPKLLNGNWVTKRKRRKLLVGPDQPSGKEQSNVKEDNSVTSESSRNASTKRMIKTDV 64
K S +++ +WV K+KRRKL D K S++ D+ + SS+ +K+ +KTD
Sbjct: 2 KDSGSEMIKRDWVMKQKRRKLPSILDILDQKVDSSMAFDSPEYTSSSK--PSKQRLKTD- 58
Query: 65 ATKHQFSSKKRGNDGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPS 124
+T + SSK++GNDG +FECV+CD GGDLLCCDSCPRTYH CLNPPLKRIP GKW CP
Sbjct: 59 STPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPK 118
Query: 125 CVEGNDQLAPKNHLDSFSKRARTKIVTGKSKGGDNSLNLEKVSAIFGSKLISKKRSSTKG 184
C ++ L P N LD+ +KRARTK SK G E+ S I+ S +IS ++SS KG
Sbjct: 119 CSPNSEALKPVNRLDAIAKRARTKTKKRNSKAGPK---CERASQIYCSSIISGEQSSEKG 175
Query: 185 KSLSSMGVNSVKFFGKKPIPSQVD---------ATCSDKPVDPSLGSCVEGDADEKISNL 235
KS+S+ K GK+ S +D A+ D+P S G G ++L
Sbjct: 176 KSISA---EESKSTGKEVYSSPMDGCSTAELGHASADDRPDSSSHGEDDLGKPVIPTADL 232
Query: 236 SPSVSPKDRKSTSPAKEDSSSSKFNNLEANDEQLEGKTDLSCNKIPLRKTLVLAIAAGGE 295
P D T + ED S SK ++ E E K + + ++I KT V + G
Sbjct: 233 -----PSDAGLTLLSCEDLSESKLSDTEKTHEAPVEKLEHASSEIVENKT-VAEMETGKG 286
Query: 296 EVKKRKHKVVDDNAVQKKRRTEKGKKIVNTSIKSKSGNSKVQKKKSMAHTISTSVLKKDV 355
+ KKRK ++ D ++++ + +K K + + S S +K + + LK
Sbjct: 287 KRKKRKRELNDGESLERCKTDKKRAKKSLSKVGSSSQTTKSPESSKKKKKKNRVTLKS-- 344
Query: 356 GNKNSDVQQKDEKLSQVMKDTSNELDRAGSNVDKSEMREDI--AIVEGLQVDRVLGCRIQ 413
S Q K E +V K E + S ED V LQV RVLGCRIQ
Sbjct: 345 ---LSKPQSKTETPEKVKKLPKEERRAVRATNKSSSCLEDTNSLPVGNLQVHRVLGCRIQ 401
Query: 414 GENMDSLRHLSLNIVDDSPSGDQLISENQTRQLEDNSPCDNDLDVESTENLVDGPQNVKS 473
G SL S D L S+N +++
Sbjct: 402 GLTKTSLC---------SALSDDLCSDN-----------------------------LQA 423
Query: 474 SDKEGELKNTDGVERIHVHRRSITKESKKGNRVDSLSKTTDGIGSSPGNGKDQDDTTVSA 533
+D+ L E + +R+DS S+T S KD DD+ +
Sbjct: 424 TDQRDSLVQDTNAELVVAE-----------DRIDSSSETGKSSRDSRLRDKDMDDSALGT 472
Query: 534 EPLEKPNDKMDTEESIDVTLRSERSSELPKNCEIHVSLETKQ-KELDVEKGMSSSVHNK- 591
E + + ++M +E+ + TL E K E HVS+E + +E E G S+V ++
Sbjct: 473 EGMVEVKEEMLSEDISNATLSRHVDDEDMKVSETHVSVERELLEEAHQETGEKSTVADEE 532
Query: 592 VQDANVVESACPNEEKISFEFLVKWVGKSHIHNSWISESHLKALAKRKLENYKAKYGMAI 651
+++ +++ E +S+EFLVKWV KS+IHN+WISE+ LK LAKRKLENYKAKYG A+
Sbjct: 533 IEEPVAAKTSDLIGETVSYEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKAKYGTAV 592
Query: 652 INICEERWKHPQRLLALRPSQHGRSEAFVKWTGLPYDECTWEKIDEPVLQNSSHLITIFK 711
INICE++WK PQR++ALR S+ G EA+VKWTGL YDECTWE ++EP+L++SSHLI +F
Sbjct: 593 INICEDKWKQPQRIVALRVSKEGNQEAYVKWTGLAYDECTWESLEEPILKHSSHLIDLFH 652
Query: 712 KLEALTVEKDASKENSRKHNDRQNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSK 771
+ E T+E+++ +R+ + ++ LTEQP+EL+GGALF HQLEALNWLR+CW++SK
Sbjct: 653 QYEQKTLERNSKGNPTRE----RGEVVTLTEQPQELRGGALFAHQLEALNWLRRCWHKSK 708
Query: 772 NVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVE 831
NVILADEMGLGKTVSA AFLSSLYFEF TMPNWLSEFSLWAP +NVVE
Sbjct: 709 NVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVE 768
Query: 832 YHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIV 891
YHGSAK RAIIR YEWHA +G KK +YKFNVLLTTYEMVLADSSHLRGVPWEVL+V
Sbjct: 769 YHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVV 828
Query: 892 DEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEE 951
DEGHRLKNS SKLFSLLNTFSFQHRVLLTGTPLQNN+GEMYNLLNFLQP+SFPSL+SFEE
Sbjct: 829 DEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEE 888
Query: 952 KFNDLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTK 1011
+F+DL +AEKV+ELKKLVAPHMLRRLKKDAM+NIPPKTERMVPVEL+SIQAEYYRAMLTK
Sbjct: 889 RFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTK 948
Query: 1012 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTL 1071
NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+SGS+EFLH+MRIKASAKLTL
Sbjct: 949 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTL 1008
Query: 1072 LHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARF 1131
LHSMLK+LH+EGHRVLIFSQMTKLLDILEDYLNIEFGPKT+ERVDGSV+VADRQ AIARF
Sbjct: 1009 LHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARF 1068
Query: 1132 NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 1191
NQDK+RFVFLLSTR+CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYR
Sbjct: 1069 NQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1128
Query: 1192 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDISE 1251
LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE EDIL+WGTEELFNDS G N KD +E
Sbjct: 1129 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFNDSAGENKKDTAE 1188
Query: 1252 NSISNKDEAVADIEHKHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGST 1311
S N D + D+E K RK+ GGLGDVYQDKCT+ KI+WD+ AI+KLLDRSNLQ ST
Sbjct: 1189 -SNGNLD-VIMDLESKSRKKGGGLGDVYQDKCTEGNGKIVWDDIAIMKLLDRSNLQSAST 1246
Query: 1312 DIAEGDSENDMLGSVKAIEWNDEPTEDHVVGESPPDGTDDMC-PNSEKKEDNVVIGNEEN 1370
D A+ + +NDMLGSVK +EWN+E E+ V ESP TDD P+SE+K+D+VV EEN
Sbjct: 1247 DAADTELDNDMLGSVKPVEWNEETAEEQVGAESPALVTDDTGEPSSERKDDDVVNFTEEN 1306
Query: 1371 EWDRLLRVRWEKYQSEEEAVLGRGKRQRKTVSYREVYAPYPSEAMNESGGXXXXXXXXXX 1430
EWDRLLR+RWEKYQSEEEA LGRGKR RK VSYRE YAP+ S +NESGG
Sbjct: 1307 EWDRLLRMRWEKYQSEEEAALGRGKRLRKAVSYREAYAPHTSGPVNESGGEDEKEPEPEL 1366
Query: 1431 XXXYTPXXXXXXXXXXXXXXXQKERLAQRNAVKESHPTEGFPVPGSESQTPPPAIAKGGG 1490
YTP QK +A+RN+V+ES P+ G
Sbjct: 1367 KKEYTPAGRALKEKFTKLRERQKNLIARRNSVEESLPS-------------------GNV 1407
Query: 1491 DLGAGPVHSVPEGP-SINLNDSEYAQLSEGQISNADSL-PRIDKHRKHKMRGPVDVSVNN 1548
D + E P S++L+DS+ +Q + Q A S P+ D +H S+
Sbjct: 1408 DQVTEVANQDEESPTSMDLDDSKASQQCDAQKRKASSSDPKPDLLSQHHHGAECLPSL-- 1465
Query: 1549 PGRSLPEIFLPNHHNKGRXXXXXXXXXXXXXXVLGLCAPNANQTESSERNISKLNWRQNR 1608
P +LP VLGLCAPN Q+ESS RN S+ RQNR
Sbjct: 1466 PPNNLP--------------------------VLGLCAPNFTQSESSRRNYSRPGSRQNR 1499
Query: 1609 HGTRQEFPFNLAACAGTSMDAEVRSKE-TAANTKLSDASTENLQQNFKNCILDNSLPFVP 1667
T FPFNL + ++ E +E K + E QQ N +D LP
Sbjct: 1500 PITGPHFPFNLPQTSNL-VEREANDQEPPMGKLKPQNIKEEPFQQPLSN--MDGWLPHRQ 1556
Query: 1668 FPPSVRGKESDAFESSRARFTAFQEKMALPNLPFDERLLGRFPLTTKSMANSHMDLLSNL 1727
FPPS + + SS A F FQEK L NLPFD++LL RFP ++M SH D+++NL
Sbjct: 1557 FPPS---GDFERPRSSGAAFADFQEKFPLLNLPFDDKLLPRFPFQPRTMGTSHQDIMANL 1613
Query: 1728 SLGGRHEALNAAMQDL---PTMPALPNFKMPPEDLFRYNQQDMDVPPTLGLGQRPTTFSS 1784
S+ R E +MQDL MP LPN K+PP D +NQQ+ D+PP LGL Q P+ SS
Sbjct: 1614 SMRKRFEGTGHSMQDLFGGTPMPFLPNMKIPPMDPPVFNQQEKDLPP-LGLDQFPSALSS 1672
Query: 1785 FPENHRKVLENIMMRTXXXXXXXXXXXXXXDGWSEDELDSLWIGVRRHGKGNWDAMLRDP 1844
PENHRKVLENIM+RT D WSEDELDSLWIG+RRHG GNW+ +LRDP
Sbjct: 1673 IPENHRKVLENIMLRTGSGIGHVQKKKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDP 1732
Query: 1845 KLRFSKHKLSEDLSVRWEEEQVKVFQGPPFPVQRSSKATKSTKPAHFP-ISDGMMERALQ 1903
+L+FSK K E L+ RWEEEQ K +SS+ KSTK + FP + G+M RAL
Sbjct: 1733 RLKFSKFKTPEYLAARWEEEQRKFLDSLSSLPSKSSRTDKSTKSSLFPGLPQGIMNRALH 1792
Query: 1904 GSKFLLPPKFQNHLTDMKLGRCDSPSSLPPFRALDRPSLQSDHFAPLPSWSYDMNRAKFP 1963
G K+ PP+FQ+HLTD+KLG D S LP F D +S+HF P+ + D P
Sbjct: 1793 G-KYATPPRFQSHLTDIKLGFGDLASPLPLFEPSDHLGFRSEHFPPMANLCTD----NLP 1847
Query: 1964 EDAPAETSDRPGSSNNVPTERPXXXXXXXXXXXXXXXXXXXXXIGTQQKEDDQGSRKRGK 2023
+ A S+R G+S N+P E+P + T + E+ + + KRGK
Sbjct: 1848 GEPSAGPSERAGTSTNIPNEKPFPLNSLGMGNLGSLGLDSLSSLNTLRAEEKRDAIKRGK 1907
Query: 2024 LPVRLEGAANDMCDDRVNVXXXXXXXXX-----XXXNPIRPELVHSKGEEAAGSSMSKDK 2078
LP+ L+ M D NV NP P G + G S S++K
Sbjct: 1908 LPLFLDMPLPQMLDSSNNVFLGRSANPSFLHPNRGLNPSNP-----MGRDIMGISSSENK 1962
Query: 2079 LPHWLRQAVTSP-AKLPD-PELPPTVTAIAHSIRMLYGED 2116
LPHWLR VT P K P+ P LPPTV+AIA S+R+LYGED
Sbjct: 1963 LPHWLRNVVTVPTVKSPEPPTLPPTVSAIAQSVRVLYGED 2002
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 558 bits (1439), Expect = e-158, Method: Compositional matrix adjust.
Identities = 338/823 (41%), Positives = 478/823 (58%), Gaps = 100/823 (12%)
Query: 611 EFLVKWVGKSHIHNSWISESHLKALAKR------KLENYKAKYGMAIINICEE------- 657
++LVKW G S++H SW+ E + K ++ N+ + M N E+
Sbjct: 130 QYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQ--MESFNNSEDDFVAIRP 187
Query: 658 RWKHPQRLLALRPSQHGRSEAFVKWTGLPYDECTWE-KIDEPVLQNSSHLITIFKKLEAL 716
W R+LA R + G E VK+ L YDEC WE + D QN I FK + +
Sbjct: 188 EWTTVDRILACR-EEDGELEYLVKYKELSYDECYWESESDISTFQNE---IQRFKDVNSR 243
Query: 717 TVEKDASKENSRKHNDRQNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILA 776
T SK+ K N R D P+ LKG L P+QLE LN+LR W + +VILA
Sbjct: 244 T---RRSKDVDHKRNPR--DFQQFDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILA 297
Query: 777 DEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSA 836
DEMGLGKT+ + A L+SL+ E T+ NW EF+ WAP +NVV Y G+A
Sbjct: 298 DEMGLGKTIQSIALLASLFEE--NLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTA 355
Query: 837 KARAIIRQYEWH-----------ANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVP 885
+ARA+IR++E++ +G K + KF+VLLT+YEM+ DS+ L+ +
Sbjct: 356 QARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIK 415
Query: 886 WEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPS 945
WE +IVDEGHRLKN SKLFS L +S HR+LLTGTPLQNNL E++ L++FL F S
Sbjct: 416 WECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGS 475
Query: 946 LTSFEEKFNDLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYY 1005
L F+E+F D+ E++ L K++APH+LRR+KKD MK++PPK E ++ V+LSS+Q EYY
Sbjct: 476 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYY 535
Query: 1006 RAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKA 1065
+A+ T+NYQ+L KG AQ S+ NI+M+LRKVC HPY++ G EP + +++
Sbjct: 536 KAIFTRNYQVLTK--KGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLES 593
Query: 1066 SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQ 1125
KL LL M+ L +GHRVLI++Q +LD+LEDY YER+DG V A+RQ
Sbjct: 594 CGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCT--HKKWQYERIDGKVGGAERQ 651
Query: 1126 TAIARFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1184
I RFN ++ ++F FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR+GQ+
Sbjct: 652 IRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 711
Query: 1185 NRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----QKEVEDILKWGTEELFND 1240
N++++YRL+ R ++EER++QL KKK++L+ L V K + Q+E++DI+++G++ELF
Sbjct: 712 NKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKELF-- 769
Query: 1241 SPGLNGKDISENSISNKDEAVADIEHKHRKRTGGLGDVYQDKCTDIGSKILWDENAILKL 1300
S DEA G G KI +D+ AI KL
Sbjct: 770 -------------ASEDDEA------------GKSG------------KIHYDDAAIDKL 792
Query: 1301 LDRSNLQDGSTDIAEGDSENDMLGSVKA--IEWNDEPTEDHVVGESPPDGTDDMCPNSEK 1358
LDR +L + + + EN L + K E+ DE + + + NS++
Sbjct: 793 LDR-DLVEAEEVSVDDEEENGFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDR 851
Query: 1359 KEDNVVIGNEENEWDRLLRVRWEKYQSEEEAVLGRGKRQRKTV 1401
+ W+ LL+ ++E +Q+EE LG+ KR RK +
Sbjct: 852 A----------SYWEELLKDKFELHQAEELNALGKRKRSRKQL 884
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEGNDQLAPKNHLD 139
C C +L+ C++C +H KCL PPLK W+CP CV +P N +D
Sbjct: 52 CQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECV------SPLNEID 101
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 317/819 (38%), Positives = 460/819 (56%), Gaps = 106/819 (12%)
Query: 611 EFLVKWVGKSHIHNSWISESHLKALAKR----KLENYKAKYGMAI-INICEE-------- 657
++LVKW G S++H SW+ E + K KL+ ++ A+ + I E
Sbjct: 78 QYLVKWKGLSYLHCSWVPEQEFEKAYKSHPHLKLKLRVTRFNAAMDVFIAENGAHEFIAI 137
Query: 658 --RWKHPQRLLALRPSQHGRSEAFVKWTGLPYDECTWEKIDEPVLQNSSHLITIFKKLEA 715
WK R++A R G E VK+ L Y WE E + + + I FK + +
Sbjct: 138 RPEWKTVDRIIACREGDDG-EEYLVKYKELSYRNSYWES--ESDISDFQNEIQRFKDINS 194
Query: 716 LTVEKDASKENSRKHND-RQNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVI 774
+ +D EN R + +Q D+ E G L +QLE LN+LR W + NVI
Sbjct: 195 -SSRRDKYVENERNREEFKQFDLT------PEFLTGTLHTYQLEGLNFLRYSWSKKTNVI 247
Query: 775 LADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHG 834
LADEMGLGKT+ + AFL+SL+ E T+ NW EF+ WAP +NVV Y G
Sbjct: 248 LADEMGLGKTIQSIAFLASLFEE--NLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTG 305
Query: 835 SAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEG 894
++AR +I ++E++ + + KF+VLLTTYEMV S L + W +I+DEG
Sbjct: 306 DSEARDVIWEHEFYFS-------EGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEG 358
Query: 895 HRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFN 954
HRLKN SKL+S L+ F+ +H VLLTGTPLQNNL E++ L++FL F SL EKF
Sbjct: 359 HRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL----EKFQ 414
Query: 955 DLATAEKVDELKKLVAPHMLRRLKKDAMKN-IPPKTERMVPVELSSIQAEYYRAMLTKNY 1013
D+ E++ L +++APH+LRRLKKD +K+ +PPK E ++ V++SS Q E Y+A++T NY
Sbjct: 415 DINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNY 474
Query: 1014 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLH 1073
Q+L K A+ S N++M+LR+VC+HPYL+P EP ++AS KL LL
Sbjct: 475 QVLTK--KRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLD 530
Query: 1074 SMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQ 1133
M+ L +GHRVLI++Q L +LEDY F YER+DG +S +RQ I RFN
Sbjct: 531 KMMVKLKEQGHRVLIYTQFQHTLYLLEDYFT--FKNWNYERIDGKISGPERQVRIDRFNA 588
Query: 1134 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL 1192
+ S RF FLLSTR+ G+GINLATADTVIIYDSD+NPHAD+QAM R HR+GQ+N++++YRL
Sbjct: 589 ENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRL 648
Query: 1193 VVRASVEERILQLAKKKLMLDQLFVNKSG-SQKEVEDILKWGTEELF---NDSPGLNGKD 1248
+ + +VEER++++ K K++L+ L V K Q E++DI+K+G++ELF ND G +G
Sbjct: 649 IHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDEAGRSG-- 706
Query: 1249 ISENSISNKDEAVADIEHKHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQD 1308
KI +D+ AI +LLDR+++ D
Sbjct: 707 ----------------------------------------KIHYDDAAIEQLLDRNHV-D 725
Query: 1309 GSTDIAEGDSENDMLGSVK--AIEWNDEPTEDHVVGESPPDGTDDMCPNSEKKEDNVVIG 1366
+ + E D L + K + E+ D+ E + E+ + N+++
Sbjct: 726 AVEVSLDDEEETDFLKNFKVASFEYVDDENEAAALEEAQAIENNSSVRNADRT------- 778
Query: 1367 NEENEWDRLLRVRWEKYQSEEEAVLGRGKRQRKTVSYRE 1405
+ W LL+ ++E Q+EE + LG+ KR K V Y E
Sbjct: 779 ---SHWKDLLKDKYEVQQAEELSALGKRKRNGKQVMYAE 814
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 301/756 (39%), Positives = 433/756 (57%), Gaps = 91/756 (12%)
Query: 659 WKHPQRLLALRPSQHGRSEAFVKWTGLPYDECTWEKIDEPVLQNSSHLITIFKKLEALTV 718
WK R++A R G E VK+ L Y WE E + + + I FK + + +
Sbjct: 100 WKTVDRIIACREGDDG-EEYLVKYKELSYRNSYWES--ESDISDFQNEIQRFKDINS-SS 155
Query: 719 EKDASKENSRKHND-RQNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILAD 777
+D EN R + +Q D+ E G L +QLE LN+LR W + NVILAD
Sbjct: 156 RRDKYVENERNREEFKQFDLT------PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILAD 209
Query: 778 EMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAK 837
EMGLGKT+ + AFL+SL+ E T+ NW EF+ WAP +NVV Y G ++
Sbjct: 210 EMGLGKTIQSIAFLASLFEE--NLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSE 267
Query: 838 ARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRL 897
AR +I ++E++ + + KF+VLLTTYEMV S L + W +I+DEGHRL
Sbjct: 268 ARDVIWEHEFYFS-------EGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRL 320
Query: 898 KNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLA 957
KN SKL+S L+ F+ +H VLLTGTPLQNNL E++ L++FL F SL EKF D+
Sbjct: 321 KNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL----EKFQDIN 376
Query: 958 TAEKVDELKKLVAPHMLRRLKKDAMKN-IPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1016
E++ L +++APH+LRRLKKD +K+ +PPK E ++ V++SS Q E Y+A++T NYQ+L
Sbjct: 377 KEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVL 436
Query: 1017 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSML 1076
K A+ S N++M+LR+VC+HPYL+P EP ++AS KL LL M+
Sbjct: 437 TK--KRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMM 492
Query: 1077 KILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS 1136
L +GHRVLI++Q L +LEDY F YER+DG +S +RQ I RFN + S
Sbjct: 493 VKLKEQGHRVLIYTQFQHTLYLLEDYFT--FKNWNYERIDGKISGPERQVRIDRFNAENS 550
Query: 1137 -RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVR 1195
RF FLLSTR+ G+GINLATADTVIIYDSD+NPHAD+QAM R HR+GQ+N++++YRL+ +
Sbjct: 551 NRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHK 610
Query: 1196 ASVEERILQLAKKKLMLDQLFVNKSG-SQKEVEDILKWGTEELF---NDSPGLNGKDISE 1251
+VEER++++ K K++L+ L V K Q E++DI+K+G++ELF ND G +G
Sbjct: 611 GTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDEAGRSG----- 665
Query: 1252 NSISNKDEAVADIEHKHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGST 1311
KI +D+ AI +LLDR+++ D
Sbjct: 666 -------------------------------------KIHYDDAAIEQLLDRNHV-DAVE 687
Query: 1312 DIAEGDSENDMLGSVK--AIEWNDEPTEDHVVGESPPDGTDDMCPNSEKKEDNVVIGNEE 1369
+ + E D L + K + E+ D+ E + E+ + N+++
Sbjct: 688 VSLDDEEETDFLKNFKVASFEYVDDENEAAALEEAQAIENNSSVRNADRT---------- 737
Query: 1370 NEWDRLLRVRWEKYQSEEEAVLGRGKRQRKTVSYRE 1405
+ W LL+ ++E Q+EE + LG+ KR K V Y E
Sbjct: 738 SHWKDLLKDKYEVQQAEELSALGKRKRNGKQVMYAE 773
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 271/684 (39%), Positives = 388/684 (56%), Gaps = 71/684 (10%)
Query: 610 FEFLVKWVGKSHIHNSWISESHLKALAK-RKLENYKAK------YGMAI----------- 651
EFL+KW G+SH+H W + S L+ L+ +K+ NY K Y A+
Sbjct: 462 MEFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVS 521
Query: 652 ----INICEERWKHPQRLLALRPSQHGRS----EAFVKWTGLPYDECTWEK-IDEPVLQN 702
++I ++ +R++A R S+ G E VKW GL Y E TWEK +D Q
Sbjct: 522 KEMDLDIIKQN-SQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQV 580
Query: 703 SSHLITIFKKLEALTVEKDASKENSRKHNDRQNDICNLTEQPKELKGGALFPHQLEALNW 762
+ I +K E + E R + + L EQP+ L GG L +QLE LN+
Sbjct: 581 A---IDEYKAREVSIAVQGKMVEQQRTKG--KASLRKLDEQPEWLIGGTLRDYQLEGLNF 635
Query: 763 LRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSL 822
L W NVILADEMGLGKTV + + L L + T+ NW EF
Sbjct: 636 LVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRK 695
Query: 823 WAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLR 882
W P +N++ Y G+ +R + +QYE++ G KFN LLTTYE+VL D + L
Sbjct: 696 WLPGMNIIVYVGTRASREVCQQYEFYNEKKVG-----RPIKFNALLTTYEVVLKDKAVLS 750
Query: 883 GVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPAS 942
+ W L+VDE HRLKNS ++L++ L FS ++++L+TGTPLQN++ E++ LL+FL P
Sbjct: 751 KIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGK 810
Query: 943 FPSLTSFEEKFNDLATAEKVDELKKL---VAPHMLRRLKKDAMKNIPPKTERMVPVELSS 999
F + F E + +L++ + EL L + PH+LRR+ KD K++PPK ER++ VE+S
Sbjct: 811 FKNKDEFVENYKNLSSFNE-SELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSP 869
Query: 1000 IQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP----GTEPDSG 1053
+Q +YY+ +L +N+ ++ KGV Q S+LNIV++L+K CNHP+L G D
Sbjct: 870 LQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDIN 926
Query: 1054 SVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1113
L ++ I +S KL +L +L L HRVLIFSQM ++LDIL +YL++ ++
Sbjct: 927 DNSKLDKI-ILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLR--GFQFQ 983
Query: 1114 RVDGSVSVADRQTAIARFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1172
R+DGS RQ A+ FN S F FLLSTR+ GLGINLATADTV+I+DSD+NP D+
Sbjct: 984 RLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDL 1043
Query: 1173 QAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED---- 1228
QAM+RAHRIGQ + +YR V SVEE IL+ AK+K++LD L + K ++ +E
Sbjct: 1044 QAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETK 1103
Query: 1229 ------------ILKWGTEELFND 1240
IL++G EELF +
Sbjct: 1104 KGSNFDKNELSAILRFGAEELFKE 1127
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/609 (37%), Positives = 334/609 (54%), Gaps = 55/609 (9%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
L QP ++G + +QL LNWL + + N ILADEMGLGKT+ + L+ L+
Sbjct: 178 LLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG 236
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
T+ NW++E + P + V++ G+ + R IR+
Sbjct: 237 INGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLL 284
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
A KF++ +T++EM + + + LR W +I+DE HR+KN S L + FS +R+L+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-----NDLATAEKVDELKKLVAPHML 974
TGTPLQNNL E++ LLNFL P F S +F+E F ND E V +L K++ P +L
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLL 402
Query: 975 RRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1034
RRLK D K +PPK E ++ V +S +Q +YY+A+L K+ L + G ++ +LNI MQ
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGERKRLLNIAMQ 459
Query: 1035 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTK 1094
LRK CNHPYL G EP G + I + K+ LL +L L RVLIFSQMT+
Sbjct: 460 LRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 517
Query: 1095 LLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS-RFVFLLSTRSCGLGINL 1153
LLDILEDYL + Y R+DG+ +R +I +N+ S +FVFLLSTR+ GLGINL
Sbjct: 518 LLDILEDYLM--YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 575
Query: 1154 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 1213
ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R +++EE++++ A KKL LD
Sbjct: 576 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
Query: 1214 QLFV-------NKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEH 1266
L + K+ ++ E+ ++++G E +F+ + + I+ +EA A+++
Sbjct: 636 ALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDA 695
Query: 1267 KHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSV 1326
K +K T D Q K D +D D N + D + S+N
Sbjct: 696 KMKKFT---EDAIQFKMDDSKGADFYD-------FDDDNKDENKLDFKKIVSDN------ 739
Query: 1327 KAIEWNDEP 1335
WND P
Sbjct: 740 ----WNDPP 744
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 363 bits (931), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 316/546 (57%), Gaps = 35/546 (6%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
L QP ++G + +QL LNWL + + N ILADEMGLGKT+ + L+ L+
Sbjct: 178 LLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG 236
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
T+ NW++E + P + V++ G+ + R IR+
Sbjct: 237 INGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLL 284
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
A KF++ +T++EM + + + LR W +I+DE HR+KN S L + FS +R+L+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-----NDLATAEKVDELKKLVAPHML 974
TGTPLQNNL E++ LLNFL P F S +F+E F ND E V +L K++ P +L
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLL 402
Query: 975 RRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1034
RRLK D K +PPK E ++ V +S +Q +YY+A+L K+ L + G ++ +LNI MQ
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGERKRLLNIAMQ 459
Query: 1035 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTK 1094
LRK CNHPYL G EP G + I + K+ LL +L L RVLIFSQMT+
Sbjct: 460 LRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 517
Query: 1095 LLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS-RFVFLLSTRSCGLGINL 1153
LLDILEDYL + Y R+DG+ +R +I +N+ S +FVFLLSTR+ GLGINL
Sbjct: 518 LLDILEDYLM--YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 575
Query: 1154 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 1213
ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R +++EE++++ A KKL LD
Sbjct: 576 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
Query: 1214 QLFV-------NKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEH 1266
L + K+ ++ E+ ++++G E +F+ + + I+ +EA A+++
Sbjct: 636 ALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDA 695
Query: 1267 KHRKRT 1272
K +K T
Sbjct: 696 KMKKFT 701
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 363 bits (931), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 316/546 (57%), Gaps = 35/546 (6%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
L QP ++G + +QL LNWL + + N ILADEMGLGKT+ + L+ L+
Sbjct: 178 LLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG 236
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
T+ NW++E + P + V++ G+ + R IR+
Sbjct: 237 INGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------------DLL 284
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
A KF++ +T++EM + + + LR W +I+DE HR+KN S L + FS +R+L+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-----NDLATAEKVDELKKLVAPHML 974
TGTPLQNNL E++ LLNFL P F S +F+E F ND E V +L K++ P +L
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLL 402
Query: 975 RRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1034
RRLK D K +PPK E ++ V +S +Q +YY+A+L K+ L + G ++ +LNI MQ
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD---LEAVNAGGERKRLLNIAMQ 459
Query: 1035 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTK 1094
LRK CNHPYL G EP G + I + K+ LL +L L RVLIFSQMT+
Sbjct: 460 LRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 517
Query: 1095 LLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS-RFVFLLSTRSCGLGINL 1153
LLDILEDYL + Y R+DG+ +R +I +N+ S +FVFLLSTR+ GLGINL
Sbjct: 518 LLDILEDYLM--YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 575
Query: 1154 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 1213
ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R +++EE++++ A KKL LD
Sbjct: 576 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635
Query: 1214 QLFV-------NKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEH 1266
L + K+ ++ E+ ++++G E +F+ + + I+ +EA A+++
Sbjct: 636 ALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDA 695
Query: 1267 KHRKRT 1272
K +K T
Sbjct: 696 KMKKFT 701
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 362 bits (929), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 228/609 (37%), Positives = 335/609 (55%), Gaps = 57/609 (9%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
L QP ++G L +QL LNWL + + N ILADEMGLGKT+ + L+ L+
Sbjct: 183 LLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG 241
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
T+ NW++E + P + V++ G+ + R IR+ E G
Sbjct: 242 INGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-ELLVAG-------- 292
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
KF++ +T++EM + + + LR W +I+DE HR+KN S L + FS +R+L+
Sbjct: 293 ---KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 349
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-----NDLATAEKVDELKKLVAPHML 974
TGTPLQNNL E++ LLNFL P F S +F+E F ND E V +L K++ P +L
Sbjct: 350 TGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLL 407
Query: 975 RRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1034
RRLK D K +PPK E ++ V +S +Q +YY+A+L K+ ++ + G ++ +LNI MQ
Sbjct: 408 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV---VNGGGERKRLLNIAMQ 464
Query: 1035 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTK 1094
LRK CNHPYL G EP G + + + K+ LL +L L RVLIFSQMT+
Sbjct: 465 LRKCCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTR 522
Query: 1095 LLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS-RFVFLLSTRSCGLGINL 1153
LLDILEDYL + Y R+DG+ +R +I +N+ S +FVFLLSTR+ GLGINL
Sbjct: 523 LLDILEDYLM--YRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 580
Query: 1154 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 1213
ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R ++E ++++ A KKL LD
Sbjct: 581 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALD 640
Query: 1214 QLFV-------NKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEH 1266
L + K+ ++ E+ ++++G E +F+ + + I+ +EA A+++
Sbjct: 641 ALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDA 700
Query: 1267 KHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSV 1326
K +K T D Q K D++A D N + D + SEN
Sbjct: 701 KMKKFT---EDAIQFKM---------DDSADFYDFDDDNKDESKVDFKKIVSEN------ 742
Query: 1327 KAIEWNDEP 1335
WND P
Sbjct: 743 ----WNDPP 747
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 362 bits (929), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 228/609 (37%), Positives = 335/609 (55%), Gaps = 57/609 (9%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
L QP ++G L +QL LNWL + + N ILADEMGLGKT+ + L+ L+
Sbjct: 183 LLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG 241
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
T+ NW++E + P + V++ G+ + R IR+ E G
Sbjct: 242 INGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-ELLVAG-------- 292
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
KF++ +T++EM + + + LR W +I+DE HR+KN S L + FS +R+L+
Sbjct: 293 ---KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 349
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-----NDLATAEKVDELKKLVAPHML 974
TGTPLQNNL E++ LLNFL P F S +F+E F ND E V +L K++ P +L
Sbjct: 350 TGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLL 407
Query: 975 RRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1034
RRLK D K +PPK E ++ V +S +Q +YY+A+L K+ ++ + G ++ +LNI MQ
Sbjct: 408 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV---VNGGGERKRLLNIAMQ 464
Query: 1035 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTK 1094
LRK CNHPYL G EP G + + + K+ LL +L L RVLIFSQMT+
Sbjct: 465 LRKCCNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTR 522
Query: 1095 LLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKS-RFVFLLSTRSCGLGINL 1153
LLDILEDYL + Y R+DG+ +R +I +N+ S +FVFLLSTR+ GLGINL
Sbjct: 523 LLDILEDYLM--YRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 580
Query: 1154 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 1213
ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R ++E ++++ A KKL LD
Sbjct: 581 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALD 640
Query: 1214 QLFV-------NKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEH 1266
L + K+ ++ E+ ++++G E +F+ + + I+ +EA A+++
Sbjct: 641 ALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDA 700
Query: 1267 KHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSV 1326
K +K T D Q K D++A D N + D + SEN
Sbjct: 701 KMKKFT---EDAIQFKM---------DDSADFYDFDDDNKDESKVDFKKIVSEN------ 742
Query: 1327 KAIEWNDEP 1335
WND P
Sbjct: 743 ----WNDPP 747
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 352 bits (904), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 308/542 (56%), Gaps = 44/542 (8%)
Query: 725 ENSRKHNDRQNDIC-NLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGK 783
E R++N + I +TEQP L+GG L +QLE L W+ + + N ILADEMGLGK
Sbjct: 375 EGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGK 434
Query: 784 TVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIR 843
T+ + ++ L +PNW++EF+ W P + Y G + R IR
Sbjct: 435 TIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIR 494
Query: 844 QYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSK 903
+ K KFNVL+T Y++++ D + L+ + W +IVDEGHRLKN S
Sbjct: 495 E------------KIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESA 542
Query: 904 LF-SLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFN----DLAT 958
L +LL + + R+LLTGTP+QN+L E+++LLNFL P F S+ +FEE FN D
Sbjct: 543 LAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGN 602
Query: 959 AEKVDE--------LKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLT 1010
DE L ++ P +LRR K + K +P KT+ ++ ++S+ Q YY+ + T
Sbjct: 603 VSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQV-T 661
Query: 1011 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLT 1070
++ G G ++ S+ N+ MQLRK CNHPYL G + + + ++AS K
Sbjct: 662 DMGRVGLQTGSGKSK-SLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEI----VRASGKFE 716
Query: 1071 LLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIAR 1130
LL +L L + GHR+L+FSQMT+L+D+LE YL + Y R+DG+ R + +
Sbjct: 717 LLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTL--NDYKYLRLDGTTKTDQRGLLLKQ 774
Query: 1131 FNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 1189
FN+ D F+FLLSTR+ GLG+NL TADTVII+DSD+NP D QA +RAHRIGQ + V
Sbjct: 775 FNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRV 834
Query: 1190 YRLVVRASVEERILQLAKKKLMLDQ------LFVNKSGSQ---KEVEDILKWGTEELFND 1240
+ LV SVEE IL+ AK+K+ +D LF S +Q + +E+I++ GT L D
Sbjct: 835 FVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTD 894
Query: 1241 SP 1242
P
Sbjct: 895 VP 896
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 303/526 (57%), Gaps = 44/526 (8%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
+T+QP L+GG L +QLE L W+ + N ILADEMGLGKT+ A ++ L
Sbjct: 374 VTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKD 433
Query: 800 XXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKT 859
+PNW +EF+LWAP ++ Y GS + R IR +
Sbjct: 434 LHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR-------------ARI 480
Query: 860 EAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNT-FSFQHRVL 918
KFNVL+T Y++++ D + L+ + W +IVDEGHRLKN L L T + + R+L
Sbjct: 481 AGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLL 540
Query: 919 LTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFN----DLATAEKVDE--------LK 966
LTGTP+QN+L E+++LLNFL P F S+ +FEE FN + +A DE L
Sbjct: 541 LTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLH 600
Query: 967 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQ 1026
++ P +LRR K + K +P KT+ ++ ++S+ Q YY+ + T ++ + G G ++
Sbjct: 601 HVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQV-TDVGRVGLHSGNGKSK- 658
Query: 1027 SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRV 1086
S+ N+ MQLRK CNHPYL G + + + ++AS K LL +L L + GHR+
Sbjct: 659 SLQNLTMQLRKCCNHPYLFVGADYNMCKKPEI----VRASGKFELLDRLLPKLKKAGHRI 714
Query: 1087 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQ-DKSRFVFLLSTR 1145
L+FSQMT+L+D+LE YL++ Y R+DGS R + +FN+ D F+FLLSTR
Sbjct: 715 LLFSQMTRLIDLLEIYLSL--NDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTR 772
Query: 1146 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQL 1205
+ GLG+NL TADT+II+DSD+NP D QA +RAHRIGQ + V+ LV S+EE IL+
Sbjct: 773 AGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILER 832
Query: 1206 AKKKLMLDQ------LFVNKSGSQ---KEVEDILKWGTEELFNDSP 1242
AK+K+ +D LF S +Q + +E+I+ GT L D P
Sbjct: 833 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMSKGTSSLGEDVP 878
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 329 bits (843), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/491 (40%), Positives = 275/491 (56%), Gaps = 29/491 (5%)
Query: 750 GALFPHQLEALNWLRKCWYRSKNVIL-ADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXX 808
L PHQ+E ++WL + + NV+L D+MGLGKT+ A +FLS L F
Sbjct: 49 ATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLC 108
Query: 809 XXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLL 868
W+SE + + P++ V+ Y G R +R+ + F+VLL
Sbjct: 109 PLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRK---------SMYDHGHFLPFDVLL 159
Query: 869 TTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFS-LLNTFSFQHRVLLTGTPLQNN 927
TTY++ L D L +PW+ I+DE RLKN S L++ LL F R+L+TGTP+QNN
Sbjct: 160 TTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNN 219
Query: 928 LGEMYNLLNFLQPASFPSLTSFEEKFNDLATA-------EKVDELKKLVAPHMLRRLKKD 980
L E++ L++F P F +L F F + E LK ++ MLRR K
Sbjct: 220 LTELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTKSL 279
Query: 981 AMKN----IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSML-NIVMQL 1035
+++ +PP TE V V L S+Q + Y ++L K L + G + + L NIV+QL
Sbjct: 280 LIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQL 339
Query: 1036 RKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKL 1095
RK C+HPYL PG EP+ E ++AS KL +L +LK LH GHRVL+FSQMT
Sbjct: 340 RKACSHPYLFPGIEPEPFEE---GEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTST 396
Query: 1096 LDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSR-FVFLLSTRSCGLGINLA 1154
LDIL+D++ E +YER+DGSV +R AI F+ D S FVF++STR+ G+G+NL
Sbjct: 397 LDILQDFM--ELRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLV 454
Query: 1155 TADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQ 1214
ADTVI Y+ D+NP D QA+ RAHRIGQ + +L LV SVEE IL+ A++KL L
Sbjct: 455 AADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSH 514
Query: 1215 LFVNKSGSQKE 1225
V + +KE
Sbjct: 515 NVVGDNMEEKE 525
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 326 bits (835), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 277/505 (54%), Gaps = 38/505 (7%)
Query: 750 GALFPHQLEALNWLRKCWYRSKNVIL-ADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXX 808
L PHQ+E ++WL + + NV+L D+MGLGKT+ A +FLS L F
Sbjct: 49 ATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLC 108
Query: 809 XXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEW-HANGPSGLNKKTEAYKFNVL 867
W+SE + + P++ V+ Y G R +R+ + H S K F+VL
Sbjct: 109 PLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSS----KGHFLPFDVL 164
Query: 868 LTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFS-LLNTFSFQHRVLLTGTPLQN 926
LTTY++ L D L +PW+ I+DE RLKN S L++ LL F R+L+TGTP+QN
Sbjct: 165 LTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQN 224
Query: 927 NLGEMYNLLNFLQPASFPSLTSFEEKFNDLATA----------EKVDELKKLVAPHMLRR 976
NL E++ L++F P F +L F F + E LK ++ MLRR
Sbjct: 225 NLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFMLRR 284
Query: 977 LKKDAMKN----IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSML-NI 1031
K +++ +PP TE V V L S+Q + Y ++L K L + G + + L NI
Sbjct: 285 TKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNI 344
Query: 1032 VMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQ 1091
V+QLRK C+HPYL PG EP+ E ++AS KL +L +LK LH GHRVL+FSQ
Sbjct: 345 VIQLRKACSHPYLFPGIEPEPFEE---GEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQ 401
Query: 1092 MTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSR-----------FVF 1140
MT LDIL+D++ E +YER+DGSV +R AI F+ R FVF
Sbjct: 402 MTSTLDILQDFM--ELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVF 459
Query: 1141 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEE 1200
++STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ + +L LV SVEE
Sbjct: 460 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEE 519
Query: 1201 RILQLAKKKLMLDQLFVNKSGSQKE 1225
IL+ A++KL L V + +KE
Sbjct: 520 VILRRAERKLQLSHNVVGDNMEEKE 544
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 318 bits (815), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 267/496 (53%), Gaps = 45/496 (9%)
Query: 739 NLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEF 798
N+ EQP L GG L +Q+ L WL + N ILADEMGLGKTV + + L
Sbjct: 741 NINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETK 800
Query: 799 KXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSA-KARAIIRQYEWHANGPSGLNK 857
+P W SE + WAP ++ + Y G+ + R + ++ H
Sbjct: 801 NDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVH--------- 851
Query: 858 KTEAYKFNVLLTTYEMVL--ADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQH 915
KFNVLLTTYE ++ D L + W +I+DEGHR+KN+ KL + L + H
Sbjct: 852 ----QKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH 907
Query: 916 RVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEK-------------- 961
R+LLTGTPLQNNL E++ LLNFL P F S F + FN +
Sbjct: 908 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEEN 967
Query: 962 ---VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1018
++ L +++ P +LRRLK +P K ER++ E S+ Y + ++ + L +
Sbjct: 968 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRVEDNLGS 1023
Query: 1019 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAKLTLLHSM 1075
IG + +++ N VM+LR +CNHPYL + ++ FL + ++ KL +L M
Sbjct: 1024 IGNAKS-RAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPI-VRLCGKLEMLDRM 1081
Query: 1076 LKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDK 1135
L L HRVL FS MT+LLD++EDYL ++ G K Y R+DG S DR I FN+
Sbjct: 1082 LPKLKATDHRVLFFSTMTRLLDVMEDYLTLK-GYK-YLRLDGQTSGGDRGALIDGFNKSG 1139
Query: 1136 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 1194
S F+FLLS R+ G+G+NL ADTVI++D+D+NP D+QA RAHRIGQ +LV R
Sbjct: 1140 SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFET 1199
Query: 1195 RASVEERILQLAKKKL 1210
SVEE++ A+ KL
Sbjct: 1200 VNSVEEQVRASAEHKL 1215
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 318 bits (814), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 267/496 (53%), Gaps = 45/496 (9%)
Query: 739 NLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEF 798
N+ EQP L GG L +Q+ L WL + N ILADEMGLGKTV + + L
Sbjct: 741 NINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETK 800
Query: 799 KXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSA-KARAIIRQYEWHANGPSGLNK 857
+P W SE + WAP ++ + Y G+ + R + ++ H
Sbjct: 801 NDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVH--------- 851
Query: 858 KTEAYKFNVLLTTYEMVL--ADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQH 915
KFNVLLTTYE ++ D L + W +I+DEGHR+KN+ KL + L + H
Sbjct: 852 ----QKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH 907
Query: 916 RVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEK-------------- 961
R+LLTGTPLQNNL E++ LLNFL P F S F + FN +
Sbjct: 908 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEEN 967
Query: 962 ---VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1018
++ L +++ P +LRRLK +P K ER++ E S+ Y + ++ + L +
Sbjct: 968 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRVEDNLGS 1023
Query: 1019 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAKLTLLHSM 1075
IG + +++ N VM+LR +CNHPYL + ++ FL + ++ KL +L M
Sbjct: 1024 IGNAKS-RAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPI-VRLCGKLEMLDRM 1081
Query: 1076 LKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDK 1135
L L HRVL FS MT+LLD++EDYL ++ G K Y R+DG S DR I FN+
Sbjct: 1082 LPKLKATDHRVLFFSTMTRLLDVMEDYLTLK-GYK-YLRLDGQTSGGDRGALIDGFNKSG 1139
Query: 1136 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 1194
S F+FLLS R+ G+G+NL ADTVI++D+D+NP D+QA RAHRIGQ +LV R
Sbjct: 1140 SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFET 1199
Query: 1195 RASVEERILQLAKKKL 1210
SVEE++ A+ KL
Sbjct: 1200 VNSVEEQVRASAEHKL 1215
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 317 bits (813), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 267/496 (53%), Gaps = 45/496 (9%)
Query: 739 NLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEF 798
N+ EQP L GG L +Q+ L WL + N ILADEMGLGKTV + + L
Sbjct: 741 NINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETK 800
Query: 799 KXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSA-KARAIIRQYEWHANGPSGLNK 857
+P W SE + WAP ++ + Y G+ + R + ++ H
Sbjct: 801 NDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVH--------- 851
Query: 858 KTEAYKFNVLLTTYEMVL--ADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQH 915
KFNVLLTTYE ++ D L + W +I+DEGHR+KN+ KL + L + H
Sbjct: 852 ----QKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSH 907
Query: 916 RVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEK-------------- 961
R+LLTGTPLQNNL E++ LLNFL P F S F + FN +
Sbjct: 908 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEEN 967
Query: 962 ---VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1018
++ L +++ P +LRRLK +P K ER++ E S+ Y + ++ + L +
Sbjct: 968 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRVEDNLGS 1023
Query: 1019 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAKLTLLHSM 1075
IG + +++ N VM+LR +CNHPYL + ++ FL + ++ KL +L M
Sbjct: 1024 IGNAKS-RAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPI-VRLCGKLEMLDRM 1081
Query: 1076 LKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDK 1135
L L HRVL FS MT+LLD++EDYL ++ G K Y R+DG S DR I FN+
Sbjct: 1082 LPKLKATDHRVLFFSTMTRLLDVMEDYLTLK-GYK-YLRLDGQTSGGDRGALIDGFNKSG 1139
Query: 1136 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 1194
S F+FLLS R+ G+G+NL ADTVI++D+D+NP D+QA RAHRIGQ +LV R
Sbjct: 1140 SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFET 1199
Query: 1195 RASVEERILQLAKKKL 1210
SVEE++ A+ KL
Sbjct: 1200 VNSVEEQVRASAEHKL 1215
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 |
chromatin remodeling 1 | chr5:26649050-26652869 FORWARD
LENGTH=764
Length = 764
Score = 303 bits (776), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 288/527 (54%), Gaps = 51/527 (9%)
Query: 734 QNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSS 793
QN++C L L GG L +QL+ + WL W N ILAD+MGLGKT+ FLS
Sbjct: 190 QNELCPL------LTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSH 243
Query: 794 LYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPS 853
L T+ NW +E + + P +N + YHG R +R+ + P
Sbjct: 244 LKGN-GLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRR----KHMP- 297
Query: 854 GLNKKTEAYKFNVLLTTYEMVLADSSH-LRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFS 912
KT KF +++T+YE+ + D+ LR PW+ +++DEGHRLKN KL L
Sbjct: 298 ----KTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLK 353
Query: 913 FQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFE------EKFNDLATAEK----- 961
+++LLTGTPLQNNL E+++LLNF+ P F S FE EK + AT E+
Sbjct: 354 MDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRR 413
Query: 962 ---VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAML--TKNYQIL 1016
V +L ++ P +LRR+K D ++P K E ++ ++ Q ++ ++ T +
Sbjct: 414 AQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLG 473
Query: 1017 RNIGKGVAQQSMLN-IVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSM 1075
N +G + LN +V+QLRK CNHP L+ G S + E+ + K LL +
Sbjct: 474 ENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEI-VGQCGKFRLLERL 532
Query: 1076 LKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE--RVDGSVSVADRQTAIARFNQ 1133
L L H+VLIFSQ TKLLDI++ Y F K +E R+DGSV + +R+ I F+
Sbjct: 533 LVRLFANNHKVLIFSQWTKLLDIMDYY----FSEKGFEVCRIDGSVKLDERRRQIKDFSD 588
Query: 1134 DKSRF-VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL 1192
+KS +FLLSTR+ GLGINL ADT I+YDSD+NP D+QAM+R HRIGQ+ + VYRL
Sbjct: 589 EKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL 648
Query: 1193 VVRASVEERILQLAKKKLMLDQLFVN---------KSGSQKEVEDIL 1230
S+E R+L+ A KL L+ + + KS + E EDIL
Sbjct: 649 STAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDIL 695
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 290/553 (52%), Gaps = 62/553 (11%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
+ QP L+ G L +QL L W+ + N ILADEMGLGKTV A ++ L EFK
Sbjct: 969 VVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL-MEFK 1027
Query: 800 XXXXXXXXXX-XXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKK 858
+ NW SE W P V+ + Y G+ R+ + +++
Sbjct: 1028 GNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKL------------FSQE 1075
Query: 859 TEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVL 918
A KFNVL+TTYE ++ D S L V W+ +I+DE R+K+ S L L+ + Q R+L
Sbjct: 1076 VCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLL 1135
Query: 919 LTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF--------------NDLATAEK--- 961
LTGTPLQN+L E+++LLN L P F + +F + F +D EK
Sbjct: 1136 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1195
Query: 962 -VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYY---RAMLT------- 1010
+ L +++ P MLRR +D ++P K ++ +S+IQ+ Y +A T
Sbjct: 1196 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1255
Query: 1011 KNYQILRN-IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKL 1069
+ + +N I + +++ N M+LRK CNHP L D F + +++ KL
Sbjct: 1256 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFND-----FSKDFLVRSCGKL 1310
Query: 1070 TLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIA 1129
+L +L L R GHRVL+FS MTKLLDILE+YL ++ Y R+DG+ S+ DR++AI
Sbjct: 1311 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL--QWRRLVYRRIDGTTSLEDRESAIV 1368
Query: 1130 RFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLL 1188
FN D F+FLLS R+ G G+NL TADTV+IYD D NP + QA+ RAHRIGQ+ +
Sbjct: 1369 DFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREV- 1427
Query: 1189 VYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKD 1248
+++ +V E++ K+ D+L +SG ++ED + G + GL +
Sbjct: 1428 --KVIYMEAVVEKLSSHQKE----DEL---RSGGSVDLEDDMA-GKDRYIGSIEGLIRNN 1477
Query: 1249 ISENSISNKDEAV 1261
I + I DE +
Sbjct: 1478 IQQYKIDMADEVI 1490
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 281 bits (718), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 288/553 (52%), Gaps = 63/553 (11%)
Query: 740 LTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFK 799
+ QP L+ G L +QL L W+ + N ILADEMGLGKTV A ++ L EFK
Sbjct: 969 VVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL-MEFK 1027
Query: 800 XXXXXXXXXX-XXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKK 858
+ NW SE W P V+ + Y G+ R S L +
Sbjct: 1028 GNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQR-------------SKLFSQ 1074
Query: 859 TEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVL 918
+ KFNVL+TTYE ++ D S L V W+ +I+DE R+K+ S L L+ + Q R+L
Sbjct: 1075 VKFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLL 1134
Query: 919 LTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF--------------NDLATAEK--- 961
LTGTPLQN+L E+++LLN L P F + +F + F +D EK
Sbjct: 1135 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1194
Query: 962 -VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYY---RAMLT------- 1010
+ L +++ P MLRR +D ++P K ++ +S+IQ+ Y +A T
Sbjct: 1195 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1254
Query: 1011 KNYQILRN-IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKL 1069
+ + +N I + +++ N M+LRK CNHP L D F + +++ KL
Sbjct: 1255 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFND-----FSKDFLVRSCGKL 1309
Query: 1070 TLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIA 1129
+L +L L R GHRVL+FS MTKLLDILE+YL ++ Y R+DG+ S+ DR++AI
Sbjct: 1310 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL--QWRRLVYRRIDGTTSLEDRESAIV 1367
Query: 1130 RFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLL 1188
FN D F+FLLS R+ G G+NL TADTV+IYD D NP + QA+ RAHRIGQ+ +
Sbjct: 1368 DFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREV- 1426
Query: 1189 VYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKD 1248
+++ +V E++ K+ D+L +SG ++ED + G + GL +
Sbjct: 1427 --KVIYMEAVVEKLSSHQKE----DEL---RSGGSVDLEDDMA-GKDRYIGSIEGLIRNN 1476
Query: 1249 ISENSISNKDEAV 1261
I + I DE +
Sbjct: 1477 IQQYKIDMADEVI 1489
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 268 bits (684), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 274/548 (50%), Gaps = 78/548 (14%)
Query: 734 QNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRS-KNVILADEMGLGKTVSACAFLS 792
QNDI + + L P+QL +N+L + + + ILADEMGLGKT+ A +L+
Sbjct: 195 QNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLT 254
Query: 793 SLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGP 852
L + NW E W P V++YHG+A+A ++
Sbjct: 255 LLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAARAA--------YSREL 306
Query: 853 SGLNKKTEAYKFNVLLTTYEMVLADSSH-------LRGVPWEVLIVDEGHRLKNSGSKLF 905
+ L+K + FNVLL Y + S L+ W +++DE H LK+ S +
Sbjct: 307 NSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRW 366
Query: 906 SLLNTFS--FQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEKVD 963
L + + R++LTGTPLQN+L E+++LL F+ P F + +K + E +
Sbjct: 367 KNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDTELIT 426
Query: 964 ELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQ-------AEYYRA-----MLTK 1011
+K ++ P +LRRLK D M+ + PK +R+ V + Q E YRA ++
Sbjct: 427 RMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKL 486
Query: 1012 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS------------GSVEF-- 1057
+ + L ++ K + ++ + N Q RK+ NHP LI D G+ F
Sbjct: 487 SSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFEC 546
Query: 1058 ----------------LHEM----------------RIKASAKLTLLHSMLKILHREGHR 1085
+H++ + SAK L +L + + GHR
Sbjct: 547 SLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHR 606
Query: 1086 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTR 1145
VLIFSQ T +LDILE L++ G TY R+DGS V DRQT + FN DKS F LLSTR
Sbjct: 607 VLIFSQWTSMLDILEWTLDV-IGV-TYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTR 664
Query: 1146 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQL 1205
+ G G+NL ADTVII+D DFNP D QA +R HRIGQ+ + ++RLV +++V+E I ++
Sbjct: 665 AGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEI 724
Query: 1206 AKKKLMLD 1213
AK+KL+LD
Sbjct: 725 AKRKLVLD 732
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 247 bits (631), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 241/498 (48%), Gaps = 69/498 (13%)
Query: 752 LFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXX 811
LF +Q + WL + + I+ DEMGLGKT+ +FL SL+F K
Sbjct: 385 LFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFS-KMYKPSIIICPVT 443
Query: 812 TMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANG-------------------- 851
+ W E W PD +V H SA Q H G
Sbjct: 444 LLRQWRREAQKWYPDFHVEILHDSA-------QDSGHGKGQGKASESDYDSESSVDSDHE 496
Query: 852 PSGLNKKTEAYKFN--------VLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSK 903
P N K N +L+TTYE + L + W ++DEGHR++N S
Sbjct: 497 PKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSD 556
Query: 904 LFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFN--------- 954
+ + HR+++TG P+QN L E+++L +F+ P L FE +F+
Sbjct: 557 ITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYA 616
Query: 955 -----DLATAEKVDE-LKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAM 1008
++TA + L+ L+ P++LRR+K D ++ KTE ++ L+ Q YRA
Sbjct: 617 NASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAF 676
Query: 1009 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI----PGTEPDSGSVEFLHEMRIK 1064
L + + I G + S+ I + +RK+CNHP L+ PD G+ E
Sbjct: 677 LASSE--VEQIFDG-NRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNPE-------- 724
Query: 1065 ASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADR 1124
S K+ ++ +LK+ ++GHRVL+FSQ ++LDILE +L +Y R+DG V R
Sbjct: 725 RSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVA--NEYSYRRMDGLTPVKQR 782
Query: 1125 QTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1184
I FN + FVF+L+T+ GLG NL A+ VII+D D+NP D+QA RA RIGQ
Sbjct: 783 MALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQK 842
Query: 1185 NRLLVYRLVVRASVEERI 1202
+ VYRL+ R ++EE++
Sbjct: 843 KDVTVYRLITRGTIEEKV 860
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 291/617 (47%), Gaps = 101/617 (16%)
Query: 706 LITIFKKLEALTVEKDASKENSRKHNDRQNDI----------CNLTEQPKELKGGALFPH 755
LI KK + + K A N+++H + + NL+ L+PH
Sbjct: 321 LILSGKKAAEMKINKPARSYNAKRHGYDERSLEDEGSITLTGLNLSYTLPGKIATMLYPH 380
Query: 756 QLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPN 815
Q E LNWL + K IL D+MGLGKT+ C+FL+ L F K +P+
Sbjct: 381 QREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGL-FHSKLIKRALVVAPKTLLPH 439
Query: 816 WLSEFSLWAPDVNVVEYHG-SAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMV 874
W+ E + EY+G S KAR +Y+ H L K +LLTTY++V
Sbjct: 440 WMKELATVGLSQMTREYYGTSTKAR----EYDLH----HILQGK------GILLTTYDIV 485
Query: 875 LADSSHLRG------------VPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGT 922
++ L+G W+ +I+DEGH +KN ++ L HR++++GT
Sbjct: 486 RNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGT 545
Query: 923 PLQNNLGEMYNLLNFLQPASFPSLTSFEEKFND--LATAEK-------------VDELKK 967
P+QNNL E++ L NF P F++ + L +K L++
Sbjct: 546 PIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLRE 605
Query: 968 LVAPHMLRRLKKD------AMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGK 1021
+ P LRRLK + A + K E +V + L++ Q + Y A L N +I+ +
Sbjct: 606 HIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFL--NSEIVLSAFD 663
Query: 1022 GVAQQSMLNIVMQLRKVCNHPYLIPG--------------TEPDSGSVEFLHEMRI---- 1063
G S L + L+K+C+HP L+ T+ ++G E L M I
Sbjct: 664 G----SPLAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERL-AMHIADNV 718
Query: 1064 ----------KASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1113
S KL+ + S+L+ L EGHRVLIFSQ K+L++++D L ++
Sbjct: 719 DTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLT--SNGYSFL 776
Query: 1114 RVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1173
R+DG+ DR + F + +FLL+++ GLG+ L AD VI+ D +NP D Q
Sbjct: 777 RIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQ 836
Query: 1174 AMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWG 1233
+++RA+RIGQ+ ++VYRL+ A+VEE+I +K++ LF + ++++ +
Sbjct: 837 SVDRAYRIGQTKDVIVYRLMTSATVEEKIY---RKQVYKGGLFKTATEHKEQIRYFSQQD 893
Query: 1234 TEELFNDSPGLNGKDIS 1250
ELF+ G G D+S
Sbjct: 894 LRELFSLPKG--GFDVS 908
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 259/531 (48%), Gaps = 85/531 (16%)
Query: 755 HQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTM- 813
+Q E +NWL + IL D+MGLGKT+ A A ++S E + +
Sbjct: 1454 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVC 1513
Query: 814 PNWLSEFSLWAPDV---------NVVEYHGSAKARAIIR-QYEWHANGPSGLNKKTEAYK 863
P+ L WA ++ +V++Y GSA+ R +R Q+ H
Sbjct: 1514 PSTL--VGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH--------------- 1556
Query: 864 FNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTP 923
NV++T+Y++V D +L W I+DEGH +KN+ SK+ + + QHR++L+GTP
Sbjct: 1557 -NVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTP 1615
Query: 924 LQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEK---------------VDELKKL 968
+QNN+ E+++L +FL P + F+ + A + ++ L K
Sbjct: 1616 IQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQ 1675
Query: 969 VAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ-----ILR------ 1017
V P +LRR K++ + ++P K + +LS +Q + Y + + I++
Sbjct: 1676 VMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSAD 1735
Query: 1018 ----NIGKGVAQQSMLNIVMQLRKVCNHPYLIPG---TEPDS--------GSVEFLHEM- 1061
++ A + + L K+C+HP L+ G TEP + G + + E+
Sbjct: 1736 SGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELH 1795
Query: 1062 RIKASAKLTLLHSMLK-------------ILHREGHRVLIFSQMTKLLDILE-DYLNIEF 1107
+++ S KL L +L+ L HRVLIF+Q LLDI+E D
Sbjct: 1796 KVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHM 1855
Query: 1108 GPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1167
TY R+DGSV R + FN D + V LL+T GLG+NL +ADT++ + D+N
Sbjct: 1856 KSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWN 1915
Query: 1168 PHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1218
P D QAM+RAHR+GQ + V+RL++R ++EE+++ L K K+ + +N
Sbjct: 1916 PMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVIN 1966
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 258/531 (48%), Gaps = 85/531 (16%)
Query: 755 HQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXX-XXXTM 813
+Q E +NWL + IL D+MGLGKT+ A A ++S E +
Sbjct: 1485 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVC 1544
Query: 814 PNWLSEFSLWAPDV---------NVVEYHGSAKARAIIR-QYEWHANGPSGLNKKTEAYK 863
P+ L WA ++ +V++Y GSA+ R +R Q+ H
Sbjct: 1545 PSTL--VGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH--------------- 1587
Query: 864 FNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTP 923
NV++T+Y++V D +L W I+DEGH +KN+ SK+ + + QHR++L+GTP
Sbjct: 1588 -NVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTP 1646
Query: 924 LQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEK---------------VDELKKL 968
+QNN+ E+++L +FL P + F+ + A + ++ L K
Sbjct: 1647 IQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQ 1706
Query: 969 VAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ-----ILR------ 1017
V P +LRR K++ + ++P K + +LS +Q + Y + + I++
Sbjct: 1707 VMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSAD 1766
Query: 1018 ----NIGKGVAQQSMLNIVMQLRKVCNHPYLIPG---TEPDS--------GSVEFLHEM- 1061
++ A + + L K+C+HP L+ G TEP + G + + E+
Sbjct: 1767 SGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELH 1826
Query: 1062 RIKASAKLTLLHSMLK-------------ILHREGHRVLIFSQMTKLLDILE-DYLNIEF 1107
+++ S KL L +L+ L HRVLIF+Q LLDI+E D
Sbjct: 1827 KVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHM 1886
Query: 1108 GPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1167
TY R+DGSV R + FN D + V LL+T GLG+NL +ADT++ + D+N
Sbjct: 1887 KSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWN 1946
Query: 1168 PHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1218
P D QAM+RAHR+GQ + V+RL++R ++EE+++ L K K+ + +N
Sbjct: 1947 PMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVIN 1997
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 250/551 (45%), Gaps = 110/551 (19%)
Query: 752 LFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXX-- 809
L HQ E + ++ + + IL D+MGLGKT+ AFL+++Y +
Sbjct: 139 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 198
Query: 810 --------XXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEA 861
+ NW SEFS WA V YHGS + + +K +A
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMIL---------------EKLKA 243
Query: 862 YKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTG 921
VL+T+++ L G+ WE++I DE HRLKN SKL+ + R+ LTG
Sbjct: 244 RGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTG 303
Query: 922 TPLQNNLGEMYNLLNFLQPASFPSLTSFE----------------EKFNDLATAEKVDEL 965
T +QN + E++NL ++ P S + F E+F +A K L
Sbjct: 304 TVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRK-QHL 362
Query: 966 KKLVAPHMLRRLKKDAMKNIP-PKTERMVPVELSSIQAEYYRAML--------------- 1009
L+ +MLRR K++ + ++ K + +V ++S +Q Y+ M+
Sbjct: 363 GSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPC 422
Query: 1010 -----TKNYQILRNIGKGVAQQSMLN-----------------IVMQLRKVCNHPYLI-- 1045
K + R I S L+ +M+L+++ NH LI
Sbjct: 423 ACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKP 482
Query: 1046 -PGTEPD-----------------------SGSVEFLHEMRIKASAKLTLLHSMLKILHR 1081
P EP+ S S F+ +K K+ L ++
Sbjct: 483 NPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWIS 542
Query: 1082 EGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFL 1141
+G ++L+FS ++LDILE +L I G ++ R+DGS RQ+ + FN S+ VFL
Sbjct: 543 KGDKILLFSYSVRMLDILEKFL-IRKG-YSFARLDGSTPTNLRQSLVDDFNASPSKQVFL 600
Query: 1142 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 1201
+ST++ GLG+NL +A+ V+I+D ++NP D+QA +R+ R GQ ++V+RL+ S+EE
Sbjct: 601 ISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEEL 660
Query: 1202 IL--QLAKKKL 1210
+ Q+ K++L
Sbjct: 661 VYTRQVYKQQL 671
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 191 bits (486), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 194/373 (52%), Gaps = 41/373 (10%)
Query: 741 TEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKX 800
T Q EL G L +Q++ L WL C+ + N ILADEMGLGKT+ A AFL+ L E
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 801 XXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTE 860
+ NW E S + PD+ + Y G + R I+R+ P + ++
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRK----NINPKRMYRRDA 690
Query: 861 AYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLT 920
F++L+T+Y++++ D + R V W+ +++DE +K+S S + L +F+ ++R+LLT
Sbjct: 691 G--FHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLT 748
Query: 921 GTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFND----------LATAEKVDELKKLVA 970
GTP+QNN+ E++ LL+F+ P F + F E F+ +++ L ++
Sbjct: 749 GTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILK 808
Query: 971 PHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAM-----LTKNYQILRNIGKGVAQ 1025
P MLRR+KKD + + KTE V +LSS Q +Y+A+ L + + R
Sbjct: 809 PFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKV 868
Query: 1026 QSMLNIVMQLRKVCNHP----------YLIPGTEPDS------GSVEFLHEMRIKASAKL 1069
+++NIV+QLRKVCNHP YL G +S G +E +H + +
Sbjct: 869 LNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVH----YSGGQN 924
Query: 1070 TLLHSMLKILHRE 1082
+++ + K+LH+E
Sbjct: 925 PIIYKIPKLLHQE 937
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
Query: 1066 SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQ 1125
S KL L +LK L HRVL+F+QMTK+L+ILEDY+N + Y R+DGS ++ DR+
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMN--YRKYKYLRLDGSSTIMDRR 1262
Query: 1126 TAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 1185
+ F FVFLLSTR+ GLGINL ADTVI Y+SD+NP D+QAM+RAHR+GQ+
Sbjct: 1263 DMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1322
Query: 1186 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL 1230
+ VYRL+ + +VEE+IL A +K + QL + +G + +D L
Sbjct: 1323 DVTVYRLICKETVEEKILHRASQKNTVQQLVM--TGGHVQGDDFL 1365
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 233/507 (45%), Gaps = 71/507 (14%)
Query: 752 LFPHQLEALNWLRKC---WYRSKNV---ILADEMGLGKTVSACAFLSSLYFEFKXXXXXX 805
L PHQ E + ++ C + S N+ ILAD+MGLGKT+ + L +L +
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV 239
Query: 806 XXXXXXT----MPNWLSEFSLWAPD-VNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTE 860
T + NW +E W D + ++ S + + SG++ T
Sbjct: 240 KKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVL-----------SGIDSFTR 288
Query: 861 AYK-FNVLLTTYEMVLADSSHL-RGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVL 918
VL+ +YE SS + ++LI DE HRLKN + L + + + RVL
Sbjct: 289 PRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVL 348
Query: 919 LTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF----------------NDLATAEKV 962
L+GTP+QN+L E + ++NF P S F + +LA A++
Sbjct: 349 LSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLA-ADRS 407
Query: 963 DELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1022
EL V +LRR ++PPK +V +++++Q Y + Q+ R +
Sbjct: 408 AELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLC---MQLKRALADN 464
Query: 1023 VAQQSMLNIVMQLRKVCNHPYLI--------PGTEPDSGSVEFL-HEMR----------- 1062
Q +L + L+K+CNHP LI PGT +EF EM
Sbjct: 465 AKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGD 524
Query: 1063 ---IKASAKLTLLHSMLKILHREGH-RVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1118
++ S K+ +L +L L R+ R+++ S T+ LD+ P + R+DGS
Sbjct: 525 GAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYP--FLRLDGS 582
Query: 1119 VSVADRQTAIARFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1177
+++ RQ + R N K F FLLS+++ G G+NL A+ ++++D D+NP D QA R
Sbjct: 583 TTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAAR 642
Query: 1178 AHRIGQSNRLLVYRLVVRASVEERILQ 1204
R GQ R+ VYR + ++EE++ Q
Sbjct: 643 VWRDGQKKRVYVYRFLSTGTIEEKVYQ 669
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 236/508 (46%), Gaps = 71/508 (13%)
Query: 752 LFPHQLEALNWLRKC---WYRSKNV---ILADEMGLGKTVSACAFLSSLYFEFKXXXXXX 805
L PHQ E + ++ C + S N+ ILAD+MGLGKT+ + L +L +
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV 239
Query: 806 XXXXXXT----MPNWLSEFSLWAPD-VNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTE 860
T + NW +E W D + ++ S + + SG++ T
Sbjct: 240 KKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVL-----------SGIDSFTR 288
Query: 861 AYK-FNVLLTTYEMVLADSSHL-RGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVL 918
VL+ +YE SS + ++LI DE HRLKN + L + + + RVL
Sbjct: 289 PRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVL 348
Query: 919 LTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF----------------NDLATAEKV 962
L+GTP+QN+L E + ++NF P S F + +LA A++
Sbjct: 349 LSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLA-ADRS 407
Query: 963 DELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLT-KNYQILRNIGK 1021
EL V +LRR ++PPK +V +++++Q+ Y ++ KN + R +
Sbjct: 408 AELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLK--RALAD 465
Query: 1022 GVAQQSMLNIVMQLRKVCNHPYLI--------PGTEPDSGSVEFL-HEMR---------- 1062
Q +L + L+K+CNHP LI PGT +EF EM
Sbjct: 466 NAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGG 525
Query: 1063 ----IKASAKLTLLHSMLKILHREGH-RVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1117
++ S K+ +L +L L R+ R+++ S T+ LD+ P + R+DG
Sbjct: 526 DGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYP--FLRLDG 583
Query: 1118 SVSVADRQTAIARFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1176
S +++ RQ + R N K F FLLS+++ G G+NL A+ ++++D D+NP D QA
Sbjct: 584 STTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAA 643
Query: 1177 RAHRIGQSNRLLVYRLVVRASVEERILQ 1204
R R GQ R+ VYR + ++EE++ Q
Sbjct: 644 RVWRDGQKKRVYVYRFLSTGTIEEKVYQ 671
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 160/308 (51%), Gaps = 26/308 (8%)
Query: 751 ALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXX 810
+L +Q L+WL + + N ILADEMGLGKT+ A L+ L +
Sbjct: 535 SLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPT 594
Query: 811 XTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTT 870
M NW +EF W P ++ Y GSAK R + RQ G LN F+V +TT
Sbjct: 595 SVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ------GWMKLNS------FHVCITT 642
Query: 871 YEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGE 930
Y +V+ DS + W+ LI+DE H +KN S+ + L F+ + R+LLTGTPLQN+L E
Sbjct: 643 YRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 702
Query: 931 MYNLLNFLQPASFPSLTSFEEKF-NDLA---------TAEKVDELKKLVAPHMLRRLKKD 980
+++L++FL P F S F++ F N +A E +D L ++ P +LRRLK+D
Sbjct: 703 LWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRD 762
Query: 981 AMKNIPPKTERMVPVELSSIQAEYYRAML-TKNYQILRNIGKGVAQQSMLNIVMQLRKVC 1039
K +P K E ++ LS Q Y + + Q G M++I+MQLRKVC
Sbjct: 763 VEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFG---MISIIMQLRKVC 819
Query: 1040 NHPYLIPG 1047
NHP L G
Sbjct: 820 NHPDLFEG 827
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 131/227 (57%), Gaps = 12/227 (5%)
Query: 1067 AKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQT 1126
KL L +L+ L GHR LIF+QMTK+LD+LE ++N+ +G TY R+DGS +RQT
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINL-YG-YTYMRLDGSTPPEERQT 1132
Query: 1127 AIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 1186
+ RFN + F+F+LSTRS G+GINL ADTVI YDSD+NP D QA +R HRIGQ+
Sbjct: 1133 LMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1192
Query: 1187 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNG 1246
+ +YRL+ +++EE IL+ A +K +LD L + + E K ELF+ L
Sbjct: 1193 VHIYRLISESTIEENILKKANQKRVLDNLVIQ--NGEYNTEFFKKLDPMELFSGHKALTT 1250
Query: 1247 KDISENS--------ISNKDEAVADIEHKHRKRTGGLGDVYQDKCTD 1285
KD E S +SN D A + + L V Q++ D
Sbjct: 1251 KDEKETSKHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEEAVD 1297
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 62/400 (15%)
Query: 741 TEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKX 800
T Q EL G L +Q++ L WL C+ + N ILADEMGLGKT+ A AFL+ L E
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 801 XXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQY--------------- 845
+ NW E S + PD+ + Y G + R I+R+
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIIS 694
Query: 846 --EWHANGPSGLNKKTEAYKF----------NVLLTTYEMVLADSSHLRGVPWEVLIVDE 893
W + +F ++L+T+Y++++ D + R V W+ +++DE
Sbjct: 695 FDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDE 754
Query: 894 GHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF 953
+K+S S + L +F+ ++R+LLTGTP+QNN+ E++ LL+F+ P F + F E F
Sbjct: 755 AQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWF 814
Query: 954 ND----------LATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAE 1003
+ +++ L ++ P MLRR+KKD + + KTE V +LSS Q
Sbjct: 815 SKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQA 874
Query: 1004 YYRAM-----LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHP----------YLIPGT 1048
+Y+A+ L + + R +++NIV+QLRKVCNHP YL G
Sbjct: 875 FYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFGV 934
Query: 1049 EPDS------GSVEFLHEMRIKASAKLTLLHSMLKILHRE 1082
+S G +E +H + + +++ + K+LH+E
Sbjct: 935 TSNSLLPHPFGELEDVH----YSGGQNPIIYKIPKLLHQE 970
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
Query: 1066 SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQ 1125
S KL L +LK L HRVL+F+QMTK+L+ILEDY+N + Y R+DGS ++ DR+
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMN--YRKYKYLRLDGSSTIMDRR 1295
Query: 1126 TAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 1185
+ F FVFLLSTR+ GLGINL ADTVI Y+SD+NP D+QAM+RAHR+GQ+
Sbjct: 1296 DMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1355
Query: 1186 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL 1230
+ VYRL+ + +VEE+IL A +K + QL + +G + +D L
Sbjct: 1356 DVTVYRLICKETVEEKILHRASQKNTVQQLVM--TGGHVQGDDFL 1398
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 231/554 (41%), Gaps = 114/554 (20%)
Query: 774 ILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXT----MPNWLSEFSLWAPD--- 826
ILA MGLGKT AFL Y + T + NW SEF W P
Sbjct: 751 ILAHTMGLGKTFQVIAFL---YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVK 807
Query: 827 -VNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADS--SHLRG 883
+ + ++ R +W G L T ++ ++ A + LR
Sbjct: 808 PLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRD 867
Query: 884 VPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASF 943
P ++L+ DE H +KN+ + L Q R+ LTG+PLQNNL E Y +++F++
Sbjct: 868 GP-DILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 926
Query: 944 PSLTSFEEKFND--------LATAEKV-----------DELKKLVAPHMLRRLKKDAMKN 984
S F +F + +TAE V ++LK V + +KKD
Sbjct: 927 GSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD---- 982
Query: 985 IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM----LNIVMQLRKVCN 1040
+PPKT ++ V+LS +Q Y+ L L G + M L ++ N
Sbjct: 983 LPPKTVFVISVKLSPLQRILYQRFLE-----LYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 1041 HPYL------------------------------------------------IPGTEPDS 1052
HP + + G
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 1053 GSVEFLHEMRIKAS---AKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLN----- 1104
V+ L + K S K+ LL +L + G + L+FSQ LD++E YL+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 1105 -----IEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV--FLLSTRSCGLGINLATAD 1157
K + R+DG ++RQ + RFN+ ++ V L+STR+ LGINL A+
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 1158 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKKKL---ML 1212
VII D +NP D+QA+ RA R GQ + YRL+ R ++EE+I Q+ K+ L ++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 1213 DQLFVNKSGSQKEV 1226
D+ V+++ S++E+
Sbjct: 1278 DRQQVHRTISKEEM 1291
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 231/554 (41%), Gaps = 114/554 (20%)
Query: 774 ILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXT----MPNWLSEFSLWAPD--- 826
ILA MGLGKT AFL Y + T + NW SEF W P
Sbjct: 751 ILAHTMGLGKTFQVIAFL---YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVK 807
Query: 827 -VNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADS--SHLRG 883
+ + ++ R +W G L T ++ ++ A + LR
Sbjct: 808 PLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRD 867
Query: 884 VPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASF 943
P ++L+ DE H +KN+ + L Q R+ LTG+PLQNNL E Y +++F++
Sbjct: 868 GP-DILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 926
Query: 944 PSLTSFEEKFND--------LATAEKV-----------DELKKLVAPHMLRRLKKDAMKN 984
S F +F + +TAE V ++LK V + +KKD
Sbjct: 927 GSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD---- 982
Query: 985 IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM----LNIVMQLRKVCN 1040
+PPKT ++ V+LS +Q Y+ L L G + M L ++ N
Sbjct: 983 LPPKTVFVISVKLSPLQRILYQRFLE-----LYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 1041 HPYL------------------------------------------------IPGTEPDS 1052
HP + + G
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 1053 GSVEFLHEMRIKAS---AKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLN----- 1104
V+ L + K S K+ LL +L + G + L+FSQ LD++E YL+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 1105 -----IEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV--FLLSTRSCGLGINLATAD 1157
K + R+DG ++RQ + RFN+ ++ V L+STR+ LGINL A+
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 1158 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKKKL---ML 1212
VII D +NP D+QA+ RA R GQ + YRL+ R ++EE+I Q+ K+ L ++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 1213 DQLFVNKSGSQKEV 1226
D+ V+++ S++E+
Sbjct: 1278 DRQQVHRTISKEEM 1291
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 231/554 (41%), Gaps = 114/554 (20%)
Query: 774 ILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXT----MPNWLSEFSLWAPD--- 826
ILA MGLGKT AFL Y + T + NW SEF W P
Sbjct: 751 ILAHTMGLGKTFQVIAFL---YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVK 807
Query: 827 -VNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADS--SHLRG 883
+ + ++ R +W G L T ++ ++ A + LR
Sbjct: 808 PLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRD 867
Query: 884 VPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASF 943
P ++L+ DE H +KN+ + L Q R+ LTG+PLQNNL E Y +++F++
Sbjct: 868 GP-DILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 926
Query: 944 PSLTSFEEKFND--------LATAEKV-----------DELKKLVAPHMLRRLKKDAMKN 984
S F +F + +TAE V ++LK V + +KKD
Sbjct: 927 GSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD---- 982
Query: 985 IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM----LNIVMQLRKVCN 1040
+PPKT ++ V+LS +Q Y+ L L G + M L ++ N
Sbjct: 983 LPPKTVFVISVKLSPLQRILYQRFLE-----LYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 1041 HPYL------------------------------------------------IPGTEPDS 1052
HP + + G
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 1053 GSVEFLHEMRIKAS---AKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLN----- 1104
V+ L + K S K+ LL +L + G + L+FSQ LD++E YL+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 1105 -----IEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV--FLLSTRSCGLGINLATAD 1157
K + R+DG ++RQ + RFN+ ++ V L+STR+ LGINL A+
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 1158 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKKKL---ML 1212
VII D +NP D+QA+ RA R GQ + YRL+ R ++EE+I Q+ K+ L ++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 1213 DQLFVNKSGSQKEV 1226
D+ V+++ S++E+
Sbjct: 1278 DRQQVHRTISKEEM 1291
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 225/549 (40%), Gaps = 125/549 (22%)
Query: 774 ILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXT----MPNWLSEFSLWAP-DVN 828
ILA MGLGKT AFL Y + T + NW SEF W P +V
Sbjct: 751 ILAHTMGLGKTFQVIAFL---YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVK 807
Query: 829 VVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEV 888
+ YE + G LN + LR P ++
Sbjct: 808 PLRIFMLGDVSRYKFFYERNFWGVKDLNAAR----------------GICNALRDGP-DI 850
Query: 889 LIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTS 948
L+ DE H +KN+ + L Q R+ LTG+PLQNNL E Y +++F++ S
Sbjct: 851 LVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPE 910
Query: 949 FEEKFND--------LATAEKV-----------DELKKLVAPHMLRRLKKDAMKNIPPKT 989
F +F + +TAE V ++LK V + +KKD +PPKT
Sbjct: 911 FRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD----LPPKT 966
Query: 990 ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM----LNIVMQLRKVCNHPYL- 1044
++ V+LS +Q Y+ L L G + M L ++ NHP +
Sbjct: 967 VFVISVKLSPLQRILYQRFLE-----LYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIP 1021
Query: 1045 -----------------------------------------------IPGTEPDSGSVEF 1057
+ G V+
Sbjct: 1022 QLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDL 1081
Query: 1058 LHEMRIKAS---AKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLN---------- 1104
L + K S K+ LL +L + G + L+FSQ LD++E YL+
Sbjct: 1082 LQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGK 1141
Query: 1105 IEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV--FLLSTRSCGLGINLATADTVIIY 1162
K + R+DG ++RQ + RFN+ ++ V L+STR+ LGINL A+ VII
Sbjct: 1142 FWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIV 1201
Query: 1163 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKKKL---MLDQLFV 1217
D +NP D+QA+ RA R GQ + YRL+ R ++EE+I Q+ K+ L ++D+ V
Sbjct: 1202 DGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQV 1261
Query: 1218 NKSGSQKEV 1226
+++ S++E+
Sbjct: 1262 HRTISKEEM 1270
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 148/581 (25%), Positives = 244/581 (41%), Gaps = 119/581 (20%)
Query: 732 DRQND-ICNLTEQPKELKGGALFPHQLEALNWLR-KCWYRSKNVILADEMGLGKTVSACA 789
D QN I EQP +L L +Q E L W + + ILADEMG+GKT+ A +
Sbjct: 114 DEQNAVIAEAAEQPLDLII-PLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAIS 172
Query: 790 FLSSLYFEFKXXXXXXXXXXXXTMP-----NWLSEFS-LWAP-DVNVVEYHGSAKARAII 842
+ + + +P WL E S L +P V++YHG + + +
Sbjct: 173 LVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNV- 231
Query: 843 RQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADS----------SHLRGVPWEVLIVD 892
+K Y F +LTT +V + S L + W +IVD
Sbjct: 232 --------------QKLMNYDF--VLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVD 275
Query: 893 EGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNL-----LNFLQPASFPSLT 947
E H +KN S+ + +R L+GTPLQN++ E+Y+L LNF + +
Sbjct: 276 EAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFF----YSTYA 331
Query: 948 SFEEKFNDLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVE--------LSS 999
SF + + A V +K L+ ++L ++N+P + LS
Sbjct: 332 SFAFRHTHITFARNV-TVKFLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSV 390
Query: 1000 IQAEYYRAMLTKNYQILRNIGKGVAQQSML--------NIVMQLRKVCNHPYLIPGTEPD 1051
++A++Y ++ Y++ + G Q L ++++LR+ +HPYL+ + P
Sbjct: 391 VEADFYESL----YKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSYSSPS 446
Query: 1052 SGSVEFL-------------------------HEM---------------RI-----KAS 1066
+ L H+ RI K S
Sbjct: 447 GANANLLDANKNEKECGFGHDPSKDYFVTSSEHQASKTKLKGFRASSILNRINLDDFKTS 506
Query: 1067 AKLTLLHSMLKILHRE--GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADR 1124
K+ L ++ + + ++FSQ T LD++ L + G + V GS+S A +
Sbjct: 507 TKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALG-KSGVSCVQLV-GSMSKAAK 564
Query: 1125 QTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1184
A+ F ++ V L+S ++ G+ +NL A V + D +NP + QA +R HRIGQ
Sbjct: 565 DAALKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQC 624
Query: 1185 NRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE 1225
+ V R ++ +VEE+IL L KKK + LF + G +E
Sbjct: 625 KPVRVVRFIMEKTVEEKILTLQKKK---EDLFESTLGDSEE 662
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 22/263 (8%)
Query: 990 ERMVPVELSSIQAEYYRAML---TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1046
E VPV+LS +Q E Y L + + L I G ++++ ++ RK C+HPY++
Sbjct: 479 EYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKIDLGALEETLNSV----RKTCDHPYVMD 534
Query: 1047 GTEPDSGSVEF-LHEM---RIKASAKLTLLHSMLKILHREGHRVLIFSQMTK------LL 1096
+ + LHE+ IKAS KL LL ML + + G + ++F Q T+ L
Sbjct: 535 ASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLG 594
Query: 1097 DILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATA 1156
+ILED++ FGPK+YE + + + +AI FN++ V LL TR+C I L A
Sbjct: 595 NILEDFVGQRFGPKSYEH---GIYSSKKNSAINNFNKESQCCVLLLETRACSQTIKLLRA 651
Query: 1157 DTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1216
D I++ S NP D++ + + S R ++RL +VEE+ L LA++ ++
Sbjct: 652 DAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQNKAV 711
Query: 1217 VNKSGSQKEVEDILKWGTEELFN 1239
N + S +L WG LF+
Sbjct: 712 ENLNRSLTHA--LLMWGASYLFD 732
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 22/263 (8%)
Query: 990 ERMVPVELSSIQAEYYRAML---TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1046
E VPV+LS +Q E Y L + + L I G ++++ ++ RK C+HPY++
Sbjct: 479 EYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKIDLGALEETLNSV----RKTCDHPYVMD 534
Query: 1047 GTEPDSGSVEF-LHEM---RIKASAKLTLLHSMLKILHREGHRVLIFSQMTK------LL 1096
+ + LHE+ IKAS KL LL ML + + G + ++F Q T+ L
Sbjct: 535 ASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLG 594
Query: 1097 DILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATA 1156
+ILED++ FGPK+YE + + + +AI FN++ V LL TR+C I L A
Sbjct: 595 NILEDFVGQRFGPKSYEH---GIYSSKKNSAINNFNKESQCCVLLLETRACSQTIKLLRA 651
Query: 1157 DTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1216
D I++ S NP D++ + + S R ++RL +VEE+ L LA++ ++
Sbjct: 652 DAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQNKAV 711
Query: 1217 VNKSGSQKEVEDILKWGTEELFN 1239
N + S +L WG LF+
Sbjct: 712 ENLNRSLTHA--LLMWGASYLFD 732
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18 |
chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 213/487 (43%), Gaps = 66/487 (13%)
Query: 752 LFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXX 811
L P Q E + ++ + V+LADEMGLGKT+ A A + + +
Sbjct: 172 LLPFQREGIEFILQ---HGGRVLLADEMGLGKTLQAIAVTTCVQESWPVLIIAPSSLRL- 227
Query: 812 TMPNWLSEFSLWA----PDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVL 867
+W + W D+ VV + + G L+ FN++
Sbjct: 228 ---HWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGV-----FNIV 279
Query: 868 LTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFS--LLNTFSFQHRVLLTGTPLQ 925
+Y++V L + ++V+I DE H LKN +K S L Q+ +LL+GTP
Sbjct: 280 --SYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 337
Query: 926 NNLGEMYNLLNFLQPASFPSLTSFEEK------FNDLATAEKVDELKKLV-APHMLRRLK 978
+ E++ L L P + ++ + + F A DEL L+ A M+RRLK
Sbjct: 338 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDELHNLMKATVMIRRLK 397
Query: 979 KDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1038
KD + +P K + V ++L++ + A+ + L +V K
Sbjct: 398 KDVLTELPSKRRQQVFLDLAAKDMKQINALFHE-----------------LKVVKSKIKD 440
Query: 1039 CNHPYLIPGTEPDSGSVEFLHEMRI------KASAKLTLLHSMLKILHREGHRVLIFSQM 1092
C +E D S++F+ + I A AK+ + L+ + G + L+F+
Sbjct: 441 CI-------SEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLENVIEAGCKFLVFAHH 493
Query: 1093 TKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRF-VFLLSTRSCGLGI 1151
+L+ L +L + R+DGS + RQ ++ F QDK +LS R+ G+GI
Sbjct: 494 QSMLEELHQFLKKK--KVGCIRIDGSTPASSRQALVSDF-QDKDEIKAAVLSIRAAGVGI 550
Query: 1152 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL- 1210
L A TVI + + P IQA +RAHRIGQ + + ++ L+ +V++ I + + KL
Sbjct: 551 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLD 610
Query: 1211 ----MLD 1213
MLD
Sbjct: 611 NLGQMLD 617
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 182/402 (45%), Gaps = 38/402 (9%)
Query: 888 VLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLT 947
+L++DE H +N S ++ L+ Q R+LL+GTP QNN E+ N+L +P LT
Sbjct: 1007 LLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLT 1066
Query: 948 SFEEKFNDLATAEK------------VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPV 995
S +K T ++ELK ++ P + ++P E +V +
Sbjct: 1067 STLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVL 1126
Query: 996 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----- 1050
+Q ++ + + +N+ + + S++++ HP L+ +
Sbjct: 1127 NPPELQRRVLESIEVTHNRKTKNVFETEHKLSLVSV---------HPSLVSRCKISEKER 1177
Query: 1051 ---DSGSVEFLHEMRI--KASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNI 1105
D + L ++R+ S K L +++ +VL+FSQ L ++ +L
Sbjct: 1178 LSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVS 1237
Query: 1106 EFGPKTYERV---DGSVSVADRQTAIARFNQDKSRF-VFLLSTRSCGLGINLATADTVII 1161
F E V G + RQT I FN KS+ VFL ST++C GI+L A VI+
Sbjct: 1238 RFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVIL 1297
Query: 1162 YDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVE-ERILQLAKKKLMLDQLFVNKS 1220
D +NP + QA++RA+RIGQ + Y LV + + E + + A+K + + +F S
Sbjct: 1298 LDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSS 1357
Query: 1221 GSQKEVEDILKWGTEELFNDSPGLNGK--DISENSISNKDEA 1260
K E I + TE+ D+ + K D+ +N I EA
Sbjct: 1358 RHDKGKEKIAEAVTEDKVLDTMVEHSKLGDMFDNLIVQPKEA 1399
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 220/527 (41%), Gaps = 85/527 (16%)
Query: 754 PHQLEALNWLRKCWYRSKN----VILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXX 809
PHQ E +L C + + ILA G GKT +FL S +
Sbjct: 267 PHQTEGFRFL--CNNLAADEPGGCILAHAPGSGKTFLLISFLQS-FMAMDPQARPLVVLP 323
Query: 810 XXTMPNWLSEFSLWAPD-VNVVEYHGSAKARAIIRQY----EWHANGPSGLNKKTEAYKF 864
+ +W EF+LW + + +++++ S KA + +Q +W S L + +
Sbjct: 324 KGIIESWKREFTLWEVEKIPLLDFY-SVKAESRKQQLKVLGQW-IKERSILFLGYQQFTR 381
Query: 865 NVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPL 924
+ +E D + +LI+DEGH +N + + S L + +V+LTGT
Sbjct: 382 IICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLF 441
Query: 925 QNNLGEMYNLLNFLQP------------------ASFP-------SLTSFEEKF------ 953
QNN+ E++N+L+ ++P A P S +S E F
Sbjct: 442 QNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVEL 501
Query: 954 ------NDLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRA 1007
N A A + +L+++ ++L K D +P +E V + LSSIQ + +
Sbjct: 502 TLQRSTNFSAKASLIKDLREM-TRNILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKG 560
Query: 1008 MLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE--PDSGSVEF-------- 1057
+ + ++ + I G A + HP L E P +G F
Sbjct: 561 L--RKMELFKQISLGAA-------------LYIHPKLKSFLEENPSNGEKGFSDNNTTVM 605
Query: 1058 -----LHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFG---P 1109
L ++ ++ K+ ++L + G ++L+FSQ + LE ++ G
Sbjct: 606 KLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLG 665
Query: 1110 KTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1169
K + G S R+ ++ RFN VF S ++CG GI+L A V+I D NP
Sbjct: 666 KEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPS 725
Query: 1170 ADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1216
QA+ RA+R GQ ++ Y+LV S EE + +K M+ +++
Sbjct: 726 VTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKMW 772
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 206/500 (41%), Gaps = 63/500 (12%)
Query: 751 ALFPHQLEALNWLRKCWYRSKNV--------------ILADEMGLGKTVSACAFLSSLYF 796
L+PHQ E ++ K + + I++ + G GKT FL S Y
Sbjct: 576 TLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQS-YL 634
Query: 797 EFKXXXXXXXXXXXXTMPNWLSEFSLWAPDV-----NVVEYHGSAKARAIIR-QYEWHAN 850
+ M W E W ++ N ++ G A A+ R + H N
Sbjct: 635 KRFPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSRLEGNRHHN 694
Query: 851 GPSGLNKKTEAYKFNVLLTTYEMV--LADSSHLRGVPW---------EVLIVDEGHRLKN 899
+ + + ++L +Y + LA + + G+ +L++DEGH +N
Sbjct: 695 SIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQVFRRMLVELPGLLVLDEGHTPRN 754
Query: 900 SGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATA 959
S ++ +L + R+ L+GT QNN E+ N+L +PA +++S + ++L+
Sbjct: 755 QSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTISS---RIHELSKC 811
Query: 960 EKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAM------LTKNY 1013
+ E ++ + + LK AM V V +I E + L +
Sbjct: 812 SQEGEHGRVNEENRIVDLK--AM------IAHFVHVHEGTILQESLPGLRDCVVVLNPPF 863
Query: 1014 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS--------GSVEFLHEMRIKA 1065
Q + + + Q+ +L V HP L P ++ L +R+K
Sbjct: 864 QQKKILDRIDTSQNTFEFEHKLSAVSVHPSLYLCCNPTKKEDLVIGPATLGTLKRLRLKY 923
Query: 1066 --SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV---DGSVS 1120
K L ++I +VL++SQ L ++ + L E E++ G V
Sbjct: 924 EEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVE 983
Query: 1121 VADRQTAIARFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1179
DRQ I FN+ D V L ST++C GI+L A V+I D +NP + QA++RA
Sbjct: 984 QRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAF 1043
Query: 1180 RIGQSNRLLVYRLVVRASVE 1199
RIGQ + +Y L+V+ + E
Sbjct: 1044 RIGQKRAVFIYHLMVKDTSE 1063
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 227/546 (41%), Gaps = 74/546 (13%)
Query: 754 PHQLEALNWLRKCWYRSK--NVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXX 811
PHQ+E +L I+A G GKT +F+ S ++
Sbjct: 352 PHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKG- 410
Query: 812 TMPNWLSEFSLW-APDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTT 870
+P W EF W D+ +++++ SAKA E A S L + E K ++L
Sbjct: 411 ILPTWKKEFVRWQVEDIPLLDFY-SAKA-------ENRAQQLSILKQWME--KKSILFLG 460
Query: 871 YE----MVLADSSH-------LRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLL 919
Y+ +V D++ L VP +LI+DEGH +N + L L +V+L
Sbjct: 461 YQQFSTIVCDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSLAQVQTPRKVVL 519
Query: 920 TGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEKVDELKKLVAPHM-LRRLK 978
+GT QN++ E++N+LN ++P F L + + + D +L + + +
Sbjct: 520 SGTLYQNHVKEVFNILNLVRP-KFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMF 578
Query: 979 KDAMKNIPPKTERMVPVELSSIQ---------AEYYRAMLT------KNYQILRNIGKGV 1023
+ +++ K+E V++ IQ YY+ ++ ++ N+
Sbjct: 579 NETVEHTLQKSEDFT-VKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSP-- 635
Query: 1024 AQQSMLNIVMQLRK---------VCNHPYLIPGTE---------PDSGSVEFLHEMRIKA 1065
LN V +LR+ V + YL P + D+ E + ++ +
Sbjct: 636 ---KQLNEVKKLRREKRKFKVSAVGSAIYLHPKLKVFSDKSDDVSDTTMDEMVEKLDLNE 692
Query: 1066 SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV---DGSVSVA 1122
K +++ + G ++L+FSQ L LE + G K + V G+ S
Sbjct: 693 GVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSE 752
Query: 1123 DRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1182
R+ ++ FN +F S ++CG GI+L A ++I D NP QA+ RA R G
Sbjct: 753 QREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPG 812
Query: 1183 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---NKSGSQK-EVEDILKWGTEELF 1238
Q + YRL+ +S EE KK ++ +++ G Q EVE I + F
Sbjct: 813 QKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKMWFEWNEYCGYQNFEVETIDVDEAGDTF 872
Query: 1239 NDSPGL 1244
+SP L
Sbjct: 873 LESPAL 878
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
Query: 1083 GHRVLIFSQMTKLLDILEDYL---NIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV 1139
G + ++FSQ TK+L++LE L +I+ Y R+DG++SVA R A+ FN V
Sbjct: 1123 GEKAIVFSQWTKMLNLLEASLVSSHIQ-----YRRLDGTMSVAARDKAVQDFNTLPEVTV 1177
Query: 1140 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVE 1199
++S ++ LG+N+ A V++ D +NP + QA++RAHRIGQ+ + V R V+ +VE
Sbjct: 1178 MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1237
Query: 1200 ERILQLAKKKLML 1212
+RIL L +KK M+
Sbjct: 1238 DRILALQQKKRMM 1250
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 881 LRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQP 940
L V W +++DE +KN +++ + R L+GTP+QN++ ++Y+ FL+
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 841
Query: 941 ASFPSLTSFEEKFNDLATAEKVDELKKLVA---PHMLRRLKKDAMK-----NIPPKTERM 992
+ S F + T V +KL A MLRR K + ++PPK+ +
Sbjct: 842 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 901
Query: 993 VPVELSSIQAEYYRAMLTKNYQILRNIGK-GVAQQSMLNI---VMQLRKVCNHPYLIPG 1047
V+ + + ++Y + ++ R + G +Q+ +NI +++LR+ C+HP L+ G
Sbjct: 902 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 960
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
Query: 1083 GHRVLIFSQMTKLLDILEDYL---NIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV 1139
G + ++FSQ TK+L++LE L +I+ Y R+DG++SVA R A+ FN V
Sbjct: 965 GEKAIVFSQWTKMLNLLEASLVSSHIQ-----YRRLDGTMSVAARDKAVQDFNTLPEVTV 1019
Query: 1140 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVE 1199
++S ++ LG+N+ A V++ D +NP + QA++RAHRIGQ+ + V R V+ +VE
Sbjct: 1020 MIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1079
Query: 1200 ERILQLAKKKLML 1212
+RIL L +KK M+
Sbjct: 1080 DRILALQQKKRMM 1092
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 881 LRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQP 940
L V W +++DE +KN +++ + R L+GTP+QN++ ++Y+ FL+
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 683
Query: 941 ASFPSLTSFEEKFNDLATAEKVDELKKLVA---PHMLRRLKKDAMK-----NIPPKTERM 992
+ S F + T V +KL A MLRR K + ++PPK+ +
Sbjct: 684 DPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 743
Query: 993 VPVELSSIQAEYYRAMLTKNYQILRNIGK-GVAQQSMLNI---VMQLRKVCNHPYLIPG 1047
V+ + + ++Y + ++ R + G +Q+ +NI +++LR+ C+HP L+ G
Sbjct: 744 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG 802
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 1066 SAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQ 1125
S+K+T L L+ L G + ++FSQ T LD+L+ + + ++ R+DG++S R+
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQ--IPLSRNNFSFVRLDGTLSQQQRE 919
Query: 1126 TAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 1185
+ F++D S V L+S ++ G+GINL A + D +NP + QA+ R HRIGQ+
Sbjct: 920 KVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTK 979
Query: 1186 RLLVYRLVVRASVEERILQL-AKKKLMLDQLFVNKSGSQKEVEDI 1229
+ + R +V+ +VEER+ + A+K+ M+ ++ +E++
Sbjct: 980 EVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARIEEL 1024
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 865 NVLLTTYEMVL--------ADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHR 916
+V++TTY ++ AD + V W +++DE H +KNS S++ R
Sbjct: 538 DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRR 597
Query: 917 VLLTGTPLQNNLGEMYNLLNFLQP---ASFPSLTSFEEKFNDLATAEKVDELKKLVAPHM 973
LTGTP+QNNL ++Y+LL FL+ ++ +K + + ++ ++ P M
Sbjct: 598 WCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIM 657
Query: 974 LRRLKKDAMKN------IPPKTERMVPVELSSIQAEYYRAMLTKN---YQILRNIGKGVA 1024
LRR K + +PP R++ ELS + ++Y A+ ++ + GK +
Sbjct: 658 LRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLH 717
Query: 1025 Q-QSMLNIVMQLRKVCNHPYLI 1045
S+L ++++LR+ C+HP+L+
Sbjct: 718 NYASILELLLRLRQCCDHPFLV 739
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 1078 ILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSR 1137
+++ G + ++F+Q TK+LD+LE ++ Y R DG ++V R A+ FN
Sbjct: 1109 VVNVAGEKAIVFTQWTKMLDLLE--AGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDV 1166
Query: 1138 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 1197
V ++S ++ LG+N+ A VI+ D +NP + QA++RAHRIGQ+ + V R V+ +
Sbjct: 1167 SVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDT 1226
Query: 1198 VEERILQLAKKK 1209
VE+RIL L +KK
Sbjct: 1227 VEDRILALQQKK 1238
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 878 SSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNF 937
S L V W +++DE +KN ++ + + R L+GTP+QN++ ++Y+ F
Sbjct: 749 SGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRF 808
Query: 938 LQPASFPSLTSFEEKFNDLATA---EKVDELKKLVAPHMLRRLKKDAMK-----NIPPKT 989
L+ + S +F E + ++ E L+ ++ MLRR K + ++PPK+
Sbjct: 809 LKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKS 868
Query: 990 ERMVPVELSSIQAEYYRAMLTKNYQILRNIGK-GVAQQSMLNI---VMQLRKVCNHP 1042
+ V+ + + ++Y + + + + G +Q+ +NI +++LR+ C HP
Sbjct: 869 IELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 925
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 1078 ILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSR 1137
+++ G + ++F+Q TK+LD+LE ++ Y R DG ++V R A+ FN
Sbjct: 1066 VVNVAGEKAIVFTQWTKMLDLLE--AGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDV 1123
Query: 1138 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 1197
V ++S ++ LG+N+ A VI+ D +NP + QA++RAHRIGQ+ + V R V+ +
Sbjct: 1124 SVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDT 1183
Query: 1198 VEERILQLAKKK 1209
VE+RIL L +KK
Sbjct: 1184 VEDRILALQQKK 1195
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 860 EAYKFNVLLTTYEMVLAD-----------SSHLRGVPWEVLIVDEGHRLKNSGSKLFSLL 908
E K++V++TTY +V S L V W +++DE +KN ++
Sbjct: 677 ELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIAC 736
Query: 909 NTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATA---EKVDEL 965
+ + R L+GTP+QN++ ++Y+ FL+ + S +F E + ++ E L
Sbjct: 737 SGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTL 796
Query: 966 KKLVAPHMLRRLKKDAMK-----NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG 1020
+ ++ MLRR K + ++PPK+ + V+ + + ++Y + + +
Sbjct: 797 QAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYA 856
Query: 1021 K-GVAQQSMLNI---VMQLRKVCNHP 1042
+ G +Q+ +NI +++LR+ C HP
Sbjct: 857 EAGTVKQNYVNILLMLLRLRQACGHP 882
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 225/541 (41%), Gaps = 106/541 (19%)
Query: 780 GLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNVVEYHGS---- 835
G GKT AFL+S Y + T+ W EF W V V HG
Sbjct: 715 GAGKTFLIIAFLAS-YLKIFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTYC 773
Query: 836 -AKARAIIRQYE---------------------WHANGPSGLNKKTEAYKFNVLLTTYEM 873
+K + I Q+E WHA PS L Y + L +
Sbjct: 774 MSKEKTI--QFEGIPKPSQDVMHVLDCLDKIQKWHAQ-PSVL---VMGYTSFLTLMREDS 827
Query: 874 VLADSSHLRGVPWE---VLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGE 930
A ++ V E +L++DEGH +++ S+L L R+LL+GT QNN E
Sbjct: 828 KFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCE 887
Query: 931 MYNLLNFLQPASF-PSLTSFEEKFNDLATAEKVDELKKLVAPHMLR-RLKKDAMKNIPPK 988
+N L +P L ++KF +K APH+L R +K + I K
Sbjct: 888 YFNTLCLARPKFVHEVLVELDKKFQTNQAEQK--------APHLLENRARKFFLDIIAKK 939
Query: 989 TERMVPVE-------LSSIQAEY--------------------YRAMLT------KNYQI 1015
+ V E L ++ + + Y ++ K+
Sbjct: 940 IDTKVGDERLQGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTK 999
Query: 1016 LRNIGKGVAQQSM-LNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAK--- 1068
L+NI + L +++ L + HP+L+ T + E L ++K AK
Sbjct: 1000 LQNIMSTYHGYPLELELLITLAAI--HPWLVKTTTCCAKFFNPQELLEIEKLKHDAKKGS 1057
Query: 1069 --LTLLHSMLKILHREGHRVLIFSQ----MTKLLDILEDYLNIEFGPKTYERVDGSVSVA 1122
+ +L+ + +++ RE ++LIF + L++ E+ + G + + G + +
Sbjct: 1058 KVMFVLNLVFRVVKRE--KILIFCHNIAPIRLFLELFENVFRWKRG-RELLTLTGDLELF 1114
Query: 1123 DRQTAIARFNQ--DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1180
+R I +F + +SR V L S +C GI+L A VI+ DS++NP QA+ RA R
Sbjct: 1115 ERGRVIDKFEEPGGQSR-VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFR 1173
Query: 1181 IGQSNRLLVYRLVVRASVEE-RILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFN 1239
GQ + VY+L+ R ++EE + + K+ + +F S++ VED +W E++ +
Sbjct: 1174 PGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIF-----SEEFVEDPSQWQAEKIED 1228
Query: 1240 D 1240
D
Sbjct: 1229 D 1229
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1085 RVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLST 1144
+ +IFSQ T +LD++E L I + R+DG++S+A R A+ F++ V L+S
Sbjct: 894 KTIIFSQWTGMLDLVE--LRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSL 951
Query: 1145 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 1204
++ LG+N+ A VI+ D +NP + QA++RAHRIGQ+ + V R+ ++ +VE+RIL+
Sbjct: 952 KAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILK 1011
Query: 1205 LA-KKKLMLDQLFVNKSG 1221
L +K+ M+ F + G
Sbjct: 1012 LQEEKRTMVASAFGEEHG 1029
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 877 DSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLN 936
D L V W +++DE +KN +++ T + R L+GTP+QN + ++Y+
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 937 FLQPASFPSLTSFEEKFNDLATAEKVDELKKLVA---PHMLRRLKKDAMK-----NIPPK 988
FL+ + SF + KKL A MLRR K + N+PPK
Sbjct: 593 FLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPK 652
Query: 989 TERMVPVELSSIQAEYYRAMLTKNYQILRNIG-KGVAQQSMLNI---VMQLRKVCNHPYL 1044
+ V+ S + +Y+ + + + G Q+ NI +++LR+ C+HP L
Sbjct: 653 VVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQL 712
Query: 1045 I 1045
+
Sbjct: 713 V 713
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 6/179 (3%)
Query: 1063 IKASAKLTLLHSMLKIL-HREGH-RVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1120
+ S K+ L ++ + R+G + ++FSQ T LD++ +Y + G + V GS++
Sbjct: 658 FQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLI-NYTLGKCGVSCVQLV-GSMT 715
Query: 1121 VADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1180
+A R TAI +F +D VFL+S ++ G+ +NL A V + D +NP + QA +R HR
Sbjct: 716 MAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHR 775
Query: 1181 IGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFN 1239
IGQ + V R ++ +VEERIL+L KKK ++ + V GSQ+ + + + LF
Sbjct: 776 IGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVG--GSQEAIGKLTEEDMRFLFT 832
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 54/218 (24%)
Query: 877 DSSHLRGVPWEVLIVDEGHRLK----NSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMY 932
+ S L V W +I+DE H +K N+ +F+L T+ R L+GTPLQN +GE+Y
Sbjct: 345 EKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATY----RWALSGTPLQNRVGELY 400
Query: 933 NLLNFLQ--PASFPSLTSFEEKFNDLATAEKVDEL------------------------- 965
+L+ FLQ P S+ + + D +
Sbjct: 401 SLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSF 460
Query: 966 -----------KKLVAPHMLRRLK--KDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKN 1012
K++ +LRR K + A +PP+ + L + +YY + L KN
Sbjct: 461 GLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYES-LYKN 519
Query: 1013 YQILRN--IGKGVAQQS---MLNIVMQLRKVCNHPYLI 1045
Q N I G + + +++ +LR+ +HPYL+
Sbjct: 520 SQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLV 557
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 1064 KASAKLTLLHSMLKILHREG--HRVLIFSQMTKLLDILEDYLNIEFGPKTYE--RVDGSV 1119
K S+K++ L L+ + + G + ++FSQ T LD+LE I + +E R DG +
Sbjct: 1106 KESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLE----IPLRRRGFEFLRFDGKL 1161
Query: 1120 SVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1179
+ R+ + FN+ K + + L+S ++ G+G+NL A +V + D +NP + QA+ R H
Sbjct: 1162 AQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIH 1221
Query: 1180 RIGQSNRLLVYRLVVRASVEERILQL-AKKKLML 1212
RIGQ + V R +V+ +VEER+ Q+ A+K+ M+
Sbjct: 1222 RIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMI 1255
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 864 FNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTP 923
+ VL + Y+ +A+S R + W +++DE H +K+ ++ S R LTGTP
Sbjct: 795 YGVLTSAYKQDMANSIFHR-IDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTP 853
Query: 924 LQNNLGEMYNLLNFLQP---ASFPSLTSFEEKFNDLATAEKVDELKKLVAPHMLRRLKK- 979
LQN L ++Y+LL FL ++ + +K + + +K ++ P MLRR K+
Sbjct: 854 LQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKET 913
Query: 980 -----DAMKNIPPKTERMVPVELSSIQAEYYRAMLTKN-YQILRNIGKGVAQQSMLNI-- 1031
+ +PP +++ E S + ++Y A+ ++ Q + + +G + NI
Sbjct: 914 RDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILE 973
Query: 1032 -VMQLRKVCNHPYLI 1045
+++LR+ CNHP+L+
Sbjct: 974 LLLRLRQCCNHPFLV 988
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
Query: 1085 RVLIFSQMTKLLDILEDYL---NIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFL 1141
+ +IFSQ T +LD++E L +IEF R+DG++S+ R A+ F+ D V +
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEF-----RRLDGTMSLIARDRAVKEFSNDPDVKVMI 882
Query: 1142 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 1201
+S ++ LG+N+ A VI+ D +NP + QA++RAHRIGQ+ + V R+ ++ +VE+R
Sbjct: 883 MSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDR 942
Query: 1202 ILQLAKKK 1209
IL L ++K
Sbjct: 943 ILALQEEK 950
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 877 DSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLN 936
DS L V W +++DE +KN +++ + R L+GTP+QN + ++Y+
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 521
Query: 937 FLQPASFPSLTSFEEKFNDLATAEKVDELKKLVA---PHMLRRLKKDAMK-----NIPPK 988
FL+ + SF + + + KKL A MLRR K + N+PPK
Sbjct: 522 FLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPK 581
Query: 989 TERMVPVELSSIQAEYYRAMLTKNY-QILRNIGKGVAQQSMLNI---VMQLRKVCNHPYL 1044
T + V+ S + +Y + + + Q G Q+ NI +++LR+ C+HP L
Sbjct: 582 TINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQL 641
Query: 1045 IPGTEPDS 1052
+ DS
Sbjct: 642 VKRYNSDS 649
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 208/507 (41%), Gaps = 101/507 (19%)
Query: 774 ILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXXXXTMPNWLSEFSLWAPDVNV---- 829
+++ G GKT AFL+S Y + T+ W EF W V V
Sbjct: 714 VISHSPGAGKTFLIIAFLTS-YLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLIH 772
Query: 830 -------------VEYHGSAK-ARAIIRQYE-------WHANGPSGLNKKTEAYKFNVLL 868
V+++G K +R ++ + WHA+ PS L Y L
Sbjct: 773 GRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAH-PSVL---VMGYTSFTTL 828
Query: 869 TTYEMVLADSSHLRGVPWE---VLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQ 925
+ A ++ V E +L++DEGH +++ S+L L R+LL+GT Q
Sbjct: 829 MREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQ 888
Query: 926 NNLGEMYNLLNFLQPASF-PSLTSFEEKFNDLATAEKVDELKKLVAPHMLR-RLKKDAMK 983
NN E +N L +P L ++KF T V++ APH+L R +K +
Sbjct: 889 NNFCEYFNTLCLARPKFIHEVLMELDQKFK---TNHGVNK-----APHLLENRARKLFLD 940
Query: 984 NIPPKTERMVPVE-----------------------------LSSIQAEYYRAMLTKNYQ 1014
I K + V E L +Q Y M + + Q
Sbjct: 941 IIAKKIDASVGDERLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQI-YTLVMNSTDIQ 999
Query: 1015 --ILRNIGKGVAQQSM--LNIVMQLRKVCNHPYLI-----------PGTEPDSGSVEFLH 1059
IL + + L + +Q+ HP+L+ P + G ++ H
Sbjct: 1000 HKILTKLQDVIKTYFGYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSEIGKLK--H 1057
Query: 1060 EMRIKASAKLTLLHSMLKILHREGHRVLIFSQ----MTKLLDILEDYLNIEFGPKTYERV 1115
+ + K S + +L+ + +++ RE ++LIF + ++ E+ + G + +
Sbjct: 1058 DAK-KGSKVMFVLNLIFRVVKRE--KILIFCHNIAPIRMFTELFENIFRWQRGREILT-L 1113
Query: 1116 DGSVSVADRQTAIARFNQ--DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1173
G + + +R I +F + + SR V L S +C GI+L A VI+ DS++NP Q
Sbjct: 1114 TGDLELFERGRVIDKFEEPGNPSR-VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQ 1172
Query: 1174 AMNRAHRIGQSNRLLVYRLVVRASVEE 1200
A+ RA R GQ + VY+L+ R ++EE
Sbjct: 1173 AIARAFRPGQQKVVYVYQLLSRGTLEE 1199
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 1087 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFN--QDKSRFVFLLST 1144
++FSQ K+L +LE L + T R+DG+++V R I F + V L S
Sbjct: 710 VVFSQFRKMLLLLETPL--KAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASL 767
Query: 1145 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 1204
++ G GINL A V ++D +NP + QAM+R HRIGQ + + R++ R S+EER+L+
Sbjct: 768 KASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLE 827
Query: 1205 LAKKK 1209
L +KK
Sbjct: 828 LQQKK 832
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 27/225 (12%)
Query: 840 AIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSH----LRGVPWEVLIVDEGH 895
I++ Y +H G + E K++++LTTY + + S ++ + W +I+DE H
Sbjct: 364 GILKVYMYH--GGERTDDVNELMKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAH 421
Query: 896 RLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKF-- 953
+KN+ ++ ++ R +TGTP+QN ++Y+L+ FL+ F S+ S+ +
Sbjct: 422 TIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPF-SIKSYWQSLIQ 480
Query: 954 NDLATAEK--VDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAM--- 1008
L K + L+ L+A LRR K+ ++ +PPKT VELS + + Y M
Sbjct: 481 RPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGE 540
Query: 1009 -------LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1046
L N ++RN ++L+I+++LR++C+ L P
Sbjct: 541 AKGVVQNLINNGSLMRNYS------TVLSIILRLRQLCDDMSLCP 579
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 147/377 (38%), Gaps = 89/377 (23%)
Query: 752 LFPHQLEALNWLRKCWYRSKNV---ILADEMGLGKTVSACAF--LSSLYFEFKXXXXXXX 806
L HQ ALNW+RK RS++ ILAD+ GLGKT+S + L L + K
Sbjct: 53 LMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQ 112
Query: 807 XXXXXTMPNWLSEFSLWAPDV----------NVVEYHGSAKARAIIRQYEWHANGPSGLN 856
+ S WA +V +V+ +HGS + +
Sbjct: 113 NSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTK----------------- 155
Query: 857 KKTEAYKFNVLLTTYEMV---------LADSSHLRG-------------------VPWEV 888
TE ++V++TTY +V L +RG V W
Sbjct: 156 DPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLR 215
Query: 889 LIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTS 948
+++DE H +KN + + + + R LTGTP++N + ++Y+ FL+ + S
Sbjct: 216 VVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNS 275
Query: 949 FEEKFN---DLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYY 1005
F ++ D +L+ ++ MLRR K + +Y
Sbjct: 276 FHQRIKAPIDKKPLHGYKKLQAILRGIMLRRTK----------------------EWSFY 313
Query: 1006 RAM-LTKNYQILRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1061
R + L ++ G + M L ++++LR+ CNHP L+ G + + +
Sbjct: 314 RKLELNSRWKFEEYAADGTLHEHMAYLLVMLLRLRQACNHPQLVNGYSHSDTTRKMSDGV 373
Query: 1062 RIKASAKLTLLHSMLKI 1078
R+ L + +LK+
Sbjct: 374 RVAPRENLIMFLDLLKL 390
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 1116 DGSVSVADRQTAIARFNQDKS----RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1171
D SV+ RQ+ + N+D S L+S ++ LG+N+ A VI+ D +NP +
Sbjct: 483 DSSVACRARQSRHST-NKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 541
Query: 1172 IQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 1209
QA++RAHRIGQ+ + V R+ ++ +VEERIL L ++K
Sbjct: 542 DQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERK 579
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 878 SSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNF 937
S L V W +++DE +KN +++ + R L+GTP+QN++ ++Y+ F
Sbjct: 786 SGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRF 845
Query: 938 LQPASFPSLTSFEEKFNDLATAEKVDELKKLVA---PHMLRRLKKDAMK-----NIPPKT 989
L+ + S F + T V +KL A MLRR K + ++PPK+
Sbjct: 846 LKYDPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKS 905
Query: 990 ERMVPVELSSIQAEYYRAMLTKNYQILRNIGK-GVAQQSMLNI---VMQLRKVCNHPYLI 1045
+ V+ + + ++Y + ++ R + G +Q+ +NI +++LR+ C+HP L+
Sbjct: 906 IELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 965
Query: 1046 PG 1047
G
Sbjct: 966 NG 967
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 46/270 (17%)
Query: 751 ALFPHQLEALNW-LRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKXXXXXXXXXX 809
AL P QL+ L + LR R +ADEMGLGKT+ A A F
Sbjct: 203 ALLPFQLDGLRFGLR----RGGRCFIADEMGLGKTLQAIAIAGC----FISEGSILVVCP 254
Query: 810 XXTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLT 869
W E W P + H H + P+ L + + V++
Sbjct: 255 AVLRFTWAEELERWLPSCLPSDVHLVFG----------HQDNPAYLPRWPK-----VVVI 299
Query: 870 TYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSK-----LFSLLNTFS-FQHRVLLTGTP 923
+Y+M+ + + W +LIVDE H L+ S K + ++L+ +H +LL+GTP
Sbjct: 300 SYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTP 359
Query: 924 LQNNLGEMYNLLNFLQPA-----SFPSLTSFEEK----------FNDLATAEKVDELKKL 968
+ ++++ +N L P + ++ E F D + ++ EL L
Sbjct: 360 SVSRPFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNIL 419
Query: 969 V-APHMLRRLKKDAMKNIPPKTERMVPVEL 997
+ M+RRLK+ + +PPK ++V + L
Sbjct: 420 LNQTVMIRRLKQHLLTQLPPKRRQIVTILL 449
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 1081 REGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFV 1139
R ++++F+ K+LD +++++ + G + R+DG+ DRQ A+ F +
Sbjct: 552 RSSTKMVVFAHHHKVLDGIQEFICDKGIG---FVRIDGTTLPRDRQLAVQSFQFSSEVKI 608
Query: 1140 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVE 1199
++ + G+G++ + A V+ + P +QA +RAHR GQ++ + VY + +++
Sbjct: 609 AIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMD 668
Query: 1200 ERILQLAKKKL-MLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKD 1258
E Q KKL + K + E+E G +F + + +++ E S +
Sbjct: 669 ESNWQNLNKKLHRISSTTDGKYDGKTEIE----IGGASIFKPAEESSEREVLEGQPSESN 724
Query: 1259 EAVAD 1263
VAD
Sbjct: 725 TVVAD 729
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 19/139 (13%)
Query: 1085 RVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFN------------ 1132
+VL+FS +LD+LE T R+ G QTAI++F
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAA--NSITCIRMKGG---RKSQTAISKFKGSEKETQKTNSH 1505
Query: 1133 --QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 1190
++KS V LL + G+NL A VI+ + NP A+ QA+ R HRIGQ LV+
Sbjct: 1506 QKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVH 1565
Query: 1191 RLVVRASVEERILQLAKKK 1209
R +V +VEE I +L + K
Sbjct: 1566 RFLVSGTVEESIYKLNRNK 1584
>AT1G05380.2 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr1:1577231-1582190 FORWARD LENGTH=1138
Length = 1138
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCV 126
C +C +GGDL+CCD CP TYH CL ++ +P+G W CP+C
Sbjct: 628 CGICGDGGDLICCDGCPSTYHQNCLG--MQVLPSGDWHCPNCT 668
>AT1G05380.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr1:1577231-1582190 FORWARD LENGTH=1138
Length = 1138
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCV 126
C +C +GGDL+CCD CP TYH CL ++ +P+G W CP+C
Sbjct: 628 CGICGDGGDLICCDGCPSTYHQNCLG--MQVLPSGDWHCPNCT 668
>AT4G14920.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr4:8531157-8535842 REVERSE LENGTH=1138
Length = 1138
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCV 126
C +C +GGDL+CCD CP T+H +CL+ ++ P G W CP+C
Sbjct: 688 CGICGDGGDLVCCDGCPSTFHQRCLD--IRMFPLGDWHCPNCT 728
>AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr5:14460790-14465727 FORWARD LENGTH=1179
Length = 1179
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
C +C +GGDL+CCD CP T+H CL+ +K+ P+G W C +C
Sbjct: 653 CGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNC 692
>AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:14401491-14406427 FORWARD LENGTH=1193
Length = 1193
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
C +C +GGDL+CCD CP T+H CL+ +K+ P+G W C +C
Sbjct: 653 CGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNC 692
>AT3G01460.1 | Symbols: MBD9, ATMBD9 | methyl-CPG-binding domain 9 |
chr3:173316-182038 FORWARD LENGTH=2176
Length = 2176
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NASTKRMIKTDVATKHQFSSKKRGNDGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPL 112
+A K+ IK V + ++ K ++G C V + +L CD+C YH CLNPPL
Sbjct: 1263 SAEMKKEIKDIVVSVNKLP-KAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPL 1321
Query: 113 KRIPTGKWQCPSCV 126
RIP G W CPSCV
Sbjct: 1322 IRIPDGNWYCPSCV 1335
>AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15393447-15399189 FORWARD LENGTH=1007
Length = 1007
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
CV+C +GG+LL CDSCPR +H++C++ P IP G W C C
Sbjct: 618 CVICADGGNLLLCDSCPRAFHIECVSLP--SIPRGNWHCKYC 657
>AT3G14980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr3:5039931-5044811 REVERSE LENGTH=1189
Length = 1189
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCV 126
C VC +GG+L+CCD+CP T+H CL+ ++ +P G W C SC
Sbjct: 729 CGVCGDGGELICCDNCPSTFHQACLS--MQVLPEGSWYCSSCT 769
>AT5G12400.1 | Symbols: | DNA binding;zinc ion binding;DNA binding
| chr5:4013813-4021018 FORWARD LENGTH=1602
Length = 1602
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 83 ECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEGNDQLAP 134
+C C G LLCCD CP YH KC+ +P G W CP C D+ AP
Sbjct: 610 DCCFCKMDGSLLCCDGCPAAYHSKCVGLASHLLPEGDWYCPEC--AFDRRAP 659
>AT5G35210.1 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13474499-13482238 REVERSE
LENGTH=1706
Length = 1706
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 78 DGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
DG EC +C G LLCCD CP YH +C+ IP G W CP C
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPEC 455
>AT5G35210.2 | Symbols: | metalloendopeptidases;zinc ion
binding;DNA binding | chr5:13476213-13482238 REVERSE
LENGTH=1539
Length = 1539
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 78 DGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
DG EC +C G LLCCD CP YH +C+ IP G W CP C
Sbjct: 408 DGNSDECRICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPEC 455
>AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:11913950-11919741 REVERSE LENGTH=1072
Length = 1072
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEGNDQLAPKNHLDSFSK 143
C +C +GG+L+CCD+CPR+YH C + P +P+ +W C CV ++ + F
Sbjct: 698 CSICRDGGELVCCDTCPRSYHKVCASLP--SLPSERWSCKYCVNMVER-------EKFVD 748
Query: 144 RARTKIVTGKSKGGDNSLNLEKVSAIFGSKLISKKRSS---TKGKSLSSMGVNS 194
I G+ +G D + S +++ S +G S +G N+
Sbjct: 749 SNLNAIAAGRVQGVDAIAEITNRCIRIVSSFVTELPSVCVLCRGHSFCRLGFNA 802
>AT5G22760.1 | Symbols: | PHD finger family protein |
chr5:7571635-7577662 FORWARD LENGTH=1566
Length = 1566
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 83 ECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSC 125
EC +C G LLCCD CP YH +C+ IP G W CP C
Sbjct: 415 ECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPEC 457
>AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr3:19892863-19897412 REVERSE LENGTH=841
Length = 841
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEG 128
C +C NGGDLL C CP+ +H CL + +P G W C SC +G
Sbjct: 489 CSICGNGGDLLLCAGCPQAFHTACLK--FQSMPEGTWYCSSCNDG 531
>AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15745033-15749615 REVERSE LENGTH=829
Length = 829
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 84 CVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEG 128
C +C +GGDLL C CP+ +H CL + +P G W C SC +G
Sbjct: 471 CSICGDGGDLLLCAGCPQAFHTACLK--FQSMPEGTWYCSSCNDG 513
>AT5G58610.1 | Symbols: | PHD finger transcription factor, putative
| chr5:23686771-23691053 REVERSE LENGTH=1065
Length = 1065
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 74 KRGNDGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEG 128
++G + F C VC GG L+ CD CP +H CL L+ +P G W C SC G
Sbjct: 689 RQGENDVF--CSVCHYGGKLILCDGCPSAFHANCLG--LEDVPDGDWFCQSCCCG 739