Miyakogusa Predicted Gene
- Lj4g3v0231930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0231930.1 tr|B9HYB0|B9HYB0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_659351 PE=4 SV=1,83.53,0,Small
MutS-related domain,Smr protein/MutS2 C-terminal; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptid,CUFF.46726.1
(814 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 1265 0.0
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 8e-46
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 4e-35
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 145 1e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 2e-34
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 4e-34
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 6e-34
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 4e-32
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 5e-32
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 135 2e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 131 2e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 1e-29
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 128 1e-29
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 4e-29
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 4e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 6e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 122 1e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 3e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 3e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 4e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 119 6e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 119 7e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 119 7e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 1e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 2e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 5e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 5e-26
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 116 6e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 8e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 9e-26
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 2e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-25
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-25
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-25
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 5e-24
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 6e-24
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 9e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 9e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 105 2e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 3e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 104 3e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 103 3e-22
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 7e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 7e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 103 7e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 100 5e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 98 2e-20
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 98 2e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 98 2e-20
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 3e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 98 3e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 3e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-18
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 91 4e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 5e-18
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 6e-18
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 90 7e-18
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 8e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 86 9e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 84 5e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-16
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 82 2e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 79 2e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 79 2e-14
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 77 4e-14
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-14
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 76 1e-13
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-13
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 8e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 73 1e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 73 1e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 72 1e-12
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 72 1e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 70 4e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 70 7e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 8e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 9e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 9e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 68 2e-11
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 3e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 68 3e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 68 3e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 67 4e-11
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 67 7e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 66 1e-10
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 2e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 3e-10
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 9e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 63 1e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 62 1e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 62 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 61 3e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 5e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 6e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 59 1e-08
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 58 3e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 58 3e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 57 4e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 56 8e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 9e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 9e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 9e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 2e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 54 3e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 5e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 6e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 7e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 50 4e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/757 (78%), Positives = 681/757 (89%), Gaps = 3/757 (0%)
Query: 60 NFMRCYCNNGSGSKE---FTEEIEYLDESGSVIYKGKGVRSVEPGLDDHVMVGDVKKPFM 116
+ +R +C+ GS E +TEE+EYLDESGSV++ GKG+RSVEPGLDDHVMVG +KKP+M
Sbjct: 79 SIVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYM 138
Query: 117 NALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQ 176
NA +VAKIVEVV+RWKWGPEL+TQLDKLQFVPNM H+TQ+LK+V + DA LSLFRWAK+Q
Sbjct: 139 NASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQ 198
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
WY PSD+CYV+LFDGLN+ RDF G+Q LF+EMV DS++ G A N+VIQYLAKAEK
Sbjct: 199 PWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEK 258
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
LEV+FCCFKK Q++GCKIDT+TYN+L+ LFLNKGLPYKAFEIYESMEKT LLD STYEL
Sbjct: 259 LEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYEL 318
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+IP+LAKSGRLDAAFKLFQ+MK R RP ++F+SLVDSMGKAGRLD++MKV+MEM+GFG
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+RP T++VSLI+SY K+GKL+TALRLWDEMK +G+RPNF LYT++IESHAKSGKL++AM
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ F DMEKAGFLPTPSTY+CLLEMHA SGQ+D AMK+YNSMTNAGLRPGLS+Y LLTLL
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
ANK+LVDVA KILLEMKAMGYSVDV ASDVLM+YIK+ SVDLAL+WLRFMGSSGI+TNNF
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNF 558
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
IIRQLFESCMK+GLY+SA+PLLET V+SA KVDL+LYTSILAHLVRCQ+E ER LMSIL
Sbjct: 559 IIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSIL 618
Query: 597 GATKHKAHSFMCGLFTGPEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXXXXXXXXXMG 656
ATKHKAH+FMCGLFTGPE R QPVL+FVREF+QG+DYELEEGAA+YF MG
Sbjct: 619 SATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVLLNYLVLMG 678
Query: 657 QINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYY 716
QINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYY
Sbjct: 679 QINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYY 738
Query: 717 GIVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVLRASGDSVMEWFKKPIVQKFLLNE 776
G+VPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVLRA G+ VMEWFKKPIVQ+FLLNE
Sbjct: 739 GVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVLRAPGELVMEWFKKPIVQQFLLNE 798
Query: 777 TPTRADILMHKLNILFPSSAPEVRSLAPPKALIAGRA 813
P+R+DILMHK+N++FPSSAPE+RS++PPK L++ +A
Sbjct: 799 IPSRSDILMHKMNVMFPSSAPELRSMSPPKPLMSSKA 835
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 248/543 (45%), Gaps = 20/543 (3%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+Q+ G +ID N ++ + G F Y + D TY M+ NL ++ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
A KL EM G +P + L+ S G+A L+ AM V +M+ G +P Y +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ + K+G L+ A+ ++ M+ G P+ Y+++I K+G L A F +M G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY ++++HA + +A+KLY M NAG P TY++++ +L + ++ A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 487 KILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
+ EM+ + D +L+ ++ K G+V+ A +W + M +G+R N L +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
++ A LL+ + + L YT +L+ + + + ++ +T H AH
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Query: 606 FMCGL-FTGPEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXXXXXXXXXMGQINRARCV 664
F+ + GP+ G+ V + F + E E + + GQ A V
Sbjct: 680 FLLKMPAAGPD--GENVRNHANNFLDLMHSEDRE-SKRGLVDAVVDFLHKSGQKEEAGSV 736
Query: 665 WKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGIVPRRIK 724
W+VA + +FP A+ W +++ +S G A+ A+ TL FRK+ML G P RI
Sbjct: 737 WEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRID 796
Query: 725 LVTG----------PTLKIVIAQMLSSVESPF---EVSKVVLRASGDSVMEWFKKPIVQK 771
+VTG ++ + ++L+ SPF + SG+ + W + V++
Sbjct: 797 IVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHVER 856
Query: 772 FLL 774
L
Sbjct: 857 MHL 859
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 201/447 (44%), Gaps = 18/447 (4%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYS 180
V + V++R++WGP + L L + Q LK +ND L F W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
Y + L R++ F + L DEMV D V NR+I +A L +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT---VTYNRLIHSYGRANYLNEA 418
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++Q+AGCK D TY +LI + G A ++Y+ M+ D+ TY ++I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K+G L AA KLF EM +G P L + ++D KA +A+K++ +M+ G+ P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y ++E G LE A ++ EM+ + P+ +Y L+++ K+G ++ A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M AG P T LL +I A +L +M GLRP L TYT+LL+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-- 656
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYIK--------EGSVDLALRWLRFMGSSGIR 532
+ L+M G + T M +K E + A +L M S
Sbjct: 657 -----GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRE 711
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ + + KSG E A + E
Sbjct: 712 SKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 248/543 (45%), Gaps = 20/543 (3%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+Q+ G +ID N ++ + G F Y + D TY M+ NL ++ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
A KL EM G +P + L+ S G+A L+ AM V +M+ G +P Y +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ + K+G L+ A+ ++ M+ G P+ Y+++I K+G L A F +M G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY ++++HA + +A+KLY M NAG P TY++++ +L + ++ A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 487 KILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
+ EM+ + D +L+ ++ K G+V+ A +W + M +G+R N L +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
++ A LL+ + + L YT +L+ + + + ++ +T H AH
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Query: 606 FMCGL-FTGPEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXXXXXXXXXMGQINRARCV 664
F+ + GP+ G+ V + F + E E + + GQ A V
Sbjct: 680 FLLKMPAAGPD--GENVRNHANNFLDLMHSEDRE-SKRGLVDAVVDFLHKSGQKEEAGSV 736
Query: 665 WKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGIVPRRIK 724
W+VA + +FP A+ W +++ +S G A+ A+ TL FRK+ML G P RI
Sbjct: 737 WEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRID 796
Query: 725 LVTG----------PTLKIVIAQMLSSVESPF---EVSKVVLRASGDSVMEWFKKPIVQK 771
+VTG ++ + ++L+ SPF + SG+ + W + V++
Sbjct: 797 IVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQSHVER 856
Query: 772 FLL 774
L
Sbjct: 857 MHL 859
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 201/447 (44%), Gaps = 18/447 (4%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYS 180
V + V++R++WGP + L L + Q LK +ND L F W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
Y + L R++ F + L DEMV D V NR+I +A L +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT---VTYNRLIHSYGRANYLNEA 418
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++Q+AGCK D TY +LI + G A ++Y+ M+ D+ TY ++I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K+G L AA KLF EM +G P L + ++D KA +A+K++ +M+ G+ P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y ++E G LE A ++ EM+ + P+ +Y L+++ K+G ++ A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M AG P T LL +I A +L +M GLRP L TYT+LL+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-- 656
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYIK--------EGSVDLALRWLRFMGSSGIR 532
+ L+M G + T M +K E + A +L M S
Sbjct: 657 -----GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRE 711
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ + + KSG E A + E
Sbjct: 712 SKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 237/512 (46%), Gaps = 17/512 (3%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+Q+ G +ID N ++ + G F Y + D TY M+ NL ++ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
A KL EM G +P + L+ S G+A L+ AM V +M+ G +P Y +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ + K+G L+ A+ ++ M+ G P+ Y+++I K+G L A F +M G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY ++++HA + +A+KLY M NAG P TY++++ +L + ++ A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 487 KILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
+ EM+ + D +L+ ++ K G+V+ A +W + M +G+R N L +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
++ A LL+ + + L YT +L+ + + + ++ +T H AH
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Query: 606 FMCGL-FTGPEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXXXXXXXXXMGQINRARCV 664
F+ + GP+ G+ V + F + E E + + GQ A V
Sbjct: 680 FLLKMPAAGPD--GENVRNHANNFLDLMHSEDRE-SKRGLVDAVVDFLHKSGQKEEAGSV 736
Query: 665 WKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGIVPRRIK 724
W+VA + +FP A+ W +++ +S G A+ A+ TL FRK+ML G P RI
Sbjct: 737 WEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRID 796
Query: 725 LVTG----------PTLKIVIAQMLSSVESPF 746
+VTG ++ + ++L+ SPF
Sbjct: 797 IVTGWGRRSRVTGTSMVRQAVEELLNIFGSPF 828
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 201/447 (44%), Gaps = 18/447 (4%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYS 180
V + V++R++WGP + L L + Q LK +ND L F W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
Y + L R++ F + L DEMV D V NR+I +A L +
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT---VTYNRLIHSYGRANYLNEA 418
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++Q+AGCK D TY +LI + G A ++Y+ M+ D+ TY ++I
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K+G L AA KLF EM +G P L + ++D KA +A+K++ +M+ G+ P
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y ++E G LE A ++ EM+ + P+ +Y L+++ K+G ++ A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M AG P T LL +I A +L +M GLRP L TYT+LL+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD-- 656
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYIK--------EGSVDLALRWLRFMGSSGIR 532
+ L+M G + T M +K E + A +L M S
Sbjct: 657 -----GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRE 711
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ + + KSG E A + E
Sbjct: 712 SKRGLVDAVVDFLHKSGQKEEAGSVWE 738
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 228/500 (45%), Gaps = 18/500 (3%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY M+ NL ++ + KL EM G +P + L+ S G+A L AM V
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+M+ G P Y +LI+ + K+G L+ A+ ++ M+ AG P+ Y+++I K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G L A F +M G P T+ ++ +HA + + A+KLY M NAG +P TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGS 528
++++ +L + ++ A + EM+ + D +L+ ++ K G+VD A +W + M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
+G+R N L + ++ A LL++ + L YT +L+ + +
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
Query: 589 ERHLMSILGATKHKAHSFMCGLF-TGPEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXX 647
++ + H AH F+ + GP+ GQ V V F + E E + +
Sbjct: 658 MGFCGQLMAVSGHPAHMFLLKMPPAGPD--GQKVRDHVSNFLDFMHSEDRE-SKRGLMDA 714
Query: 648 XXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLH 707
G A VW+VA ++P A+ + W +++ +S G A+IA+ TL
Sbjct: 715 VVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLA 774
Query: 708 RFRKRMLYYGIVPRRIKLVTG----------PTLKIVIAQMLSSVESPF---EVSKVVLR 754
FRK+ML G P RI +VTG ++ + ++L+ PF +
Sbjct: 775 WFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFV 834
Query: 755 ASGDSVMEWFKKPIVQKFLL 774
SG+ + W + V++ L
Sbjct: 835 GSGEPLKNWLLESYVERMHL 854
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 205/447 (45%), Gaps = 18/447 (4%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYS 180
V + +++R+KWG + L F + Q LK +++ L F W KRQ +
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFK 356
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
Y + L R++ F + L DEMV D V NR+I +A L+ +
Sbjct: 357 HDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNT---VTYNRLIHSYGRANYLKEA 413
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++Q+AGC+ D TY +LI + G A ++Y+ M++ D+ TY ++I
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K+G L AA +LF EM G+G P L F ++ KA ++A+K++ +M+ G++P
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y ++E G LE A ++ EM+ + P+ +Y L+++ K+G +D A +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M +AG P T LL ++ A L SM GL P L TYT+LL+ +
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD-- 651
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYIK--------EGSVDLALRWLRFMGSSGIR 532
A+ +M G + V+ M +K + D +L FM S
Sbjct: 652 -----ARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRE 706
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ + + KSGL E A + E
Sbjct: 707 SKRGLMDAVVDFLHKSGLKEEAGSVWE 733
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/563 (24%), Positives = 242/563 (42%), Gaps = 50/563 (8%)
Query: 112 KKPFM---NALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLS 168
+KP+ N V I V++ WGP + L L F P V L+ + D + +
Sbjct: 24 EKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIE 83
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM----VGDSANSGVSLLVAC 224
FRW +R++ + Y L + R R+FD + + EM G S N+ + +++ C
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 225 NR---------VIQYLAK-------------------AEKLEVSFCCFKKIQDAGCKIDT 256
+ V+Q + K ++ F+++Q+ G +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 257 ETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
+ +LI F +G A + + M+ +S D Y + I + K G++D A+K F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
++ G +P + S++ + KA RLD A+++ + P Y ++I Y +GK
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+ A L + + G P+ Y ++ K GK+D A+ F +M+K P STY
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNI 382
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
L++M +G++D A +L +SM AGL P + T +++ L + +D A + EM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 497 YSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
+ D +T ++ K G VD A + M S RTN+ + L ++ G E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 556 PLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSFMCGLFTGPE 615
+ + +N DL L + + + + E + R + + KA F+ P+
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-----KARRFV------PD 551
Query: 616 HRGQPVL--SFVREFFQGVDYEL 636
R +L ++ F YEL
Sbjct: 552 ARSYSILIHGLIKAGFANETYEL 574
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 204/468 (43%), Gaps = 9/468 (1%)
Query: 120 AVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWY 179
+ K+ +V WK+ E++ K V T + L N D + +F ++
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEV-TYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
P Y + G + FD L + A + ++A N ++ L K K++
Sbjct: 306 -PCTYAYNTMIMGYGSAGKFDEAYSLLERQ---RAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 240 SFCCFKKIQ-DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ F++++ DA + TYN LI + G AFE+ +SM+K + T +M+
Sbjct: 362 ALKVFEEMKKDAAPNL--STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
L KS +LD A +F+EM + P F SL+D +GK GR+D A KV+ +M R
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
+Y SLI+++ G+ E +++ +M P+ L ++ K+G+ + +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
F +++ F+P +Y+ L+ +G + +L+ SM G Y +++
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 479 KKLVDVAAKILLEMKAMGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFI 537
V+ A ++L EMK G+ VT V+ K +D A S I N I
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 538 IRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
L + K G + A +LE + +L + S+L LV+ +E
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 156/323 (48%), Gaps = 4/323 (1%)
Query: 193 LNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGC 252
N R DG ++ + +M+ + + + LL N + + KA + E F++I+
Sbjct: 493 FNHGRKEDGHKI-YKDMINQNCSPDLQLL---NTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
D +Y+ LI + G + +E++ SM++ C+LD+ Y ++I K G+++ A++
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
L +EMK +GF P + + S++D + K RLD A + E + IY SLI+ +
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K G+++ A + +E+ G PN + ++++ K+ +++ A+ F M++ P
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY L+ + + A + M G++P +YT +++ LA + A +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 493 KAMGYSVDVTASDVLMVYIKEGS 515
KA G D + ++ + G+
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGN 811
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L KA ++ F +++ GC +DT YN +I F G KA+++ E M+
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
TY +I LAK RLD A+ LF+E K + + I++SL+D GK GR+D A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ E+ G P + SL+++ VK+ ++ AL + MK PN Y ++I
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K K + A + +M+K G P+ +Y ++ A +G I A L++ G P
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ Y ++ L+N A + E + G + VL+
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 171/394 (43%), Gaps = 4/394 (1%)
Query: 188 MLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKI 247
++ D L +S+ D +F+EM D + C+ +I L K +++ ++ ++K+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEM--DYKVCTPDEITFCS-LIDGLGKVGRVDDAYKVYEKM 473
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRL 307
D+ C+ ++ Y SLI F N G +IY+ M +C D + + K+G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 308 DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSL 367
+ +F+E+K R F P ++ L+ + KAG + ++ M+ G Y +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
I+ + K GK+ A +L +EMK G+ P Y VI+ AK +LD A F + +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
Y+ L++ G+ID A + + GL P L T+ LL L + ++ A
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 488 ILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
MK + + + VT ++ K + A + + M G++ + +
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 547 KSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
K+G A L + + + D Y +++ L
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y ++ DG + + L +EM V V VI LAK ++L+ ++ F+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV---VTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ + +++ Y+SLI F K G
Sbjct: 647 EAKSKRIELNVVIYSSLIDGF-----------------------------------GKVG 671
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
R+D A+ + +E+ +G P L + SL+D++ KA ++ A+ M+ P Y
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
LI K K A W EM+ G +P+ YT +I AK+G + A + F +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G +P + Y ++E + + A L+ GL T VLL L ++ A
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Query: 486 AKILLEMKAMG 496
A + ++ G
Sbjct: 852 AIVGAVLRETG 862
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 9/427 (2%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYV--MLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL 221
D L F W +Q Y D V ++ L + +F+ + D G SL
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQED----GFSLD 207
Query: 222 V-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPY-KAFEIY 279
V + +I A + + + FKK+++ GCK TYN ++ +F G P+ K +
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M+ D+ TY +I + A ++F+EMK GF + +L+D GK+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R AMKV EM G+ P Y SLI +Y + G L+ A+ L ++M G +P+ Y
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
T ++ ++GK++ AMS F +M AG P T+ ++M+ G+ MK+++ +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDL 518
GL P + T+ LL + + + + EMK G+ + + L+ Y + GS +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
A+ R M +G+ + + + + G++E ++ +L + K + + Y S+L
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 579 HLVRCQE 585
+E
Sbjct: 568 AYANGKE 574
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 184/428 (42%), Gaps = 44/428 (10%)
Query: 198 DFDGVQL------LFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG 251
+FD QL LF E D S S L+A + + + K + +F F K +D
Sbjct: 110 NFDSGQLDSVLSELF-EPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQ 168
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
+D +I++ +G A ++ +++ LD +Y +I A SGR A
Sbjct: 169 SMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAV 228
Query: 312 KLFQEMKGRGFRPG-------LNIFA----------SLVDSMG----------------- 337
+F++M+ G +P LN+F SLV+ M
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 338 -KAGRL-DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
K G L A +V EM+ G+ Y +L++ Y KS + + A+++ +EM + G+ P+
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 396 FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
Y +I ++A+ G LD AM + M + G P TY LL +G+++ AM ++
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS 515
M NAG +P + T+ + + N+ KI E+ G S D+ + L+ +
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 516 VDLALRWL-RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYT 574
+D + + + M +G L + + G +E A + +++ DL Y
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 575 SILAHLVR 582
++LA L R
Sbjct: 529 TVLAALAR 536
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 156/373 (41%), Gaps = 36/373 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TYNSLI+ + G+ +A E+ M + D TY ++ ++G++++A +F+EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ G +P + F + + G G+ MK+ E+ G P + +L+ + ++G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
++ EMK AG+ P + +I ++++ G + AM+ + M AG P STY +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK----------------- 480
L A G + + K+ M + +P TY LL AN K
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 481 ------------------LVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALR 521
L+ A + E+K G+S D+T + ++ +Y + V A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
L +M G + L +S + ++ +L + K D+I Y +++
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 582 RCQEEKNERHLMS 594
R ++ + S
Sbjct: 711 RNTRMRDASRIFS 723
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
FK+++ AG + ET+N+LI+ + G +A +Y M D STY ++ LA+
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
G + + K+ EM+ +P + SL+ + + + E+ P +
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+L+ K L A R + E+K G+ P+ ++ + + + A M+
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY-TVLLTLLANKKLV 482
+ GF P+ +TY L+ MH+ S + ++ + G++P + +Y TV+ N ++
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 483 DVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
D A++I EM+ G DV T + + Y + + A+ +R+M G R N +
Sbjct: 717 D-ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 542 FESCMKSGLYESAKPLLETYVN 563
+ K + AK +E N
Sbjct: 776 VDGYCKLNRKDEAKLFVEDLRN 797
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/381 (18%), Positives = 141/381 (37%), Gaps = 73/381 (19%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L G R+ + +F+EM + N I+ K F
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF---NAFIKMYGNRGKFTEMMKIFD 443
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+I G D T+N+L+ +F G+ + +++ M++ + + T+ +I ++ G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A +++ M G P L+ + +++ ++ + G + + KV EM +P Y
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 366 SLIESY---------------VKSGKLE--------------------TALRLWDEMKIA 390
SL+ +Y V SG +E A R + E+K
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASG----- 445
G+ P+ ++ + + + A M++ GF P+ +TY L+ MH+ S
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 446 ------------------------------QIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
++ A ++++ M N+G+ P + TY +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 476 LANKKLVDVAAKILLEMKAMG 496
A + + A ++ M G
Sbjct: 744 YAADSMFEEAIGVVRYMIKHG 764
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Query: 219 SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI 278
+L++ C++ L +AE+ F ++++ G D T NS+++++ + + KA +
Sbjct: 599 TLVLVCSKC-DLLPEAER------AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 279 YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
+ M++ +TY ++ ++S + ++ +E+ +G +P + + +++ + +
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
R+ A ++ EMR G P Y + I SY E A+ + M G RPN
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Query: 399 YTLVIESHAKSGKLDIA 415
Y +++ + K + D A
Sbjct: 772 YNSIVDGYCKLNRKDEA 788
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 175/415 (42%), Gaps = 40/415 (9%)
Query: 200 DGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
D V+ F +M+G A V N +I + K +E + F++++ G DT TY
Sbjct: 244 DDVKRFFKDMIGAGARPTV---FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
NS+I F G +E M+ C D TY +I K G+L + ++EMKG
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
G +P + +++LVD+ K G + A+K +++MR G P Y SLI++ K G L
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A RL +EM G N YT +I+ + ++ A F M+ AG +P ++Y L+
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
+ +D A++L N + G++P L Y + L + + ++ A ++ EMK G
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 500 DVTASDVLM-VYIKEGSVDLALRWL----------------------------------- 523
+ LM Y K G+ L L
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 524 -RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
R G++ N I + + K E+A L E V D YTS++
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 1/361 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+CN ++ AK K + FK + AG + TYN +I +G A ++E M
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ + D+ TY MI K GRLD F+EMK P + + +L++ K G+L
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
++ + EM+G G +P Y +L++++ K G ++ A++ + +M+ G PN YT +
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I+++ K G L A ++M + G TY L++ + ++ A +L+ M AG+
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDLALR 521
P L++Y L+ K +D A ++L E+K G D+ + + ++ A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
+ M GI+ N+ I L ++ KSG LL+ +V ++ + ++ L
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 582 R 582
+
Sbjct: 589 K 589
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 161/373 (43%), Gaps = 36/373 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
+++L ++ ++ G+ +A + + M++ + + ++ AK G+ D + F++M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 318 KGRGFRPGL---NI--------------------------------FASLVDSMGKAGRL 342
G G RP + NI + S++D GK GRL
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D + EM+ P Y +LI + K GKL L + EMK G +PN Y+ +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+++ K G + A+ + DM + G +P TY L++ + G + A +L N M G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALR 521
+ TYT L+ L + + + A ++ +M G ++ + + L+ ++K ++D AL
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
L + GI+ + + E+AK ++ K + ++YT+++
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 582 RCQEEKNERHLMS 594
+ HL+
Sbjct: 554 KSGNPTEGLHLLD 566
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 4/274 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y L G ++++ D L +E+ G + L I L EK+E +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY---GTFIWGLCSLEKIEAA 526
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
++++ G K ++ Y +L+ + G P + + + M++ + T+ ++I
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 301 LAKSGRLDAAFKLFQEMKGR-GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
L K+ + A F + G + IF +++D + K ++++A + +M G P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
T Y SL++ K G + AL L D+M G + + YT ++ + +L A S
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
+M G P +L+ H G ID A++L
Sbjct: 707 EEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 4/280 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L DGL + + LF +M D+A + L + N +I KA+ ++ +
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKM--DTAGV-IPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+++ G K D Y + I + A + M++ +S Y ++ KSG
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG-FGYRPPPTIY 364
L EMK + F L+D + K + A+ + FG + I+
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
++I+ K ++E A L+++M G P+ YT +++ + K G + A++ M +
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
G Y L+ + Q+ A M G+ P
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 179/440 (40%), Gaps = 39/440 (8%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ PS Y L GL + RD D V L EM V C RV L +A K+
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV---LGRAGKIN 275
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE------------------ 280
++ K++ D GC D TY LI A E++E
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 281 -----------------SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR 323
MEK + D T+ +++ L K+G AF M+ +G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
P L+ + +L+ + + RLD A+++ M G +P Y+ I+ Y KSG +AL
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
+++MK G PN + S AK+G+ A F ++ G +P TY +++ ++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
G+ID A+KL + M G P + L+ L VD A K+ + MK M V
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 504 SDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYV 562
+ L+ + K G + A+ M G N LF+ K+ A +L +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 563 NSAAKVDLILYTSILAHLVR 582
+ D+ Y +I+ LV+
Sbjct: 636 DMGCVPDVFTYNTIIFGLVK 655
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 177/393 (45%), Gaps = 5/393 (1%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
+ + P Y+ L D + +RD D V+ + EM D V +V ++ L KA
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH---VPDVVTFTILVDALCKA 376
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
+F ++D G + TYN+LI L A E++ +ME + TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
+ I KSG +A + F++MK +G P + + + S+ KAGR A ++ ++
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G P Y +++ Y K G+++ A++L EM G P+ + +I + K+ ++D
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
A F M++ PT TY LL +G+I A++L+ M G P T+ L
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
L V +A K+L +M MG DV T + ++ +K G V A+ + M +
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYP 675
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLETYVNSAA 566
+ + L +K+ L E A ++ ++ + A
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 7/354 (1%)
Query: 216 SGVSLLVACNRVIQYLAKAEKLEVSFCCFKKI-QDAGCKIDTETYNSLITLFLNKGLPYK 274
G S+LV +I+Y K + + F+K +D G + TYN LI L +
Sbjct: 747 DGDSILVP---IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A +++ ++ T C+ D +TY ++ KSG++D F+L++EM ++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 335 SMGKAGRLDSAMKVHME-MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+ KAG +D A+ ++ + M + P Y LI+ KSG+L A +L++ M G R
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
PN A+Y ++I K+G+ D A + F M K G P TY+ L++ G++D +
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK-AMGYSVDVTASDVLMVYIK 512
+ + +GL P + Y +++ L ++ A + EMK + G + D+ + L++ +
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 513 -EGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
G V+ A + + +G+ N F L SG E A + +T V
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 5/294 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P Y L D +S D + L+ EM S + + + N VI L KA ++ +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEM---STHECEANTITHNIVISGLVKAGNVDDA 874
Query: 241 FCCFKKI-QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ + D TY LI G Y+A +++E M C + + Y ++I
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
K+G DAA LF+ M G RP L ++ LVD + GR+D + E++ G P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIA-GYRPNFALYTLVIESHAKSGKLDIAMSA 418
Y +I KS +LE AL L++EMK + G P+ Y +I + +G ++ A
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
++++++AG P T+ L+ ++ SG+ +HA +Y +M G P TY L
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 6/409 (1%)
Query: 152 HVTQALKVVNDGDAGLSLFR-WAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV 210
VT+ LK D D+ S F+ A + ++ C ML + L + + +FD M
Sbjct: 87 EVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYML-EALRVDGKLEEMAYVFDLMQ 145
Query: 211 GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
+ + + + L+ L+ + +K+++ G ++ +YN LI L L
Sbjct: 146 KRIIKRDTNTYLT---IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSR 202
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+A E+Y M TY ++ L K +D+ L +EM+ G +P + F
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+ +G+AG+++ A ++ M G P Y LI++ + KL+ A ++++MK
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
++P+ Y +++ + + LD +S+MEK G +P T+ L++ +G A
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY 510
+ M + G+ P L TY L+ L +D A ++ M+++G V + Y
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 511 I-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
K G AL M + GI N S K+G AK +
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 8/279 (2%)
Query: 122 AKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSP 181
KI E+ + +K E+ T + + + ++ +K N DA L L+ +SP
Sbjct: 834 GKIDELFELYK---EMSTHECEANTITHNIVISGLVKAGNVDDA-LDLYYDLMSDRDFSP 889
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
+ Y L DGL++S + LF+ M+ ++ N +I KA + + +
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY---NILINGFGKAGEADAAC 946
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
FK++ G + D +TY+ L+ G + ++ ++++ D Y L+I L
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 302 AKSGRLDAAFKLFQEMK-GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
KS RL+ A LF EMK RG P L + SL+ ++G AG ++ A K++ E++ G P
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
+ +LI Y SGK E A ++ M G+ PN Y
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 170/407 (41%), Gaps = 13/407 (3%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKLE 238
P+ Y L GL ++ LF+ MV G N+ + N + L K +++
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT-----ITFNTLFDCLCKNDEVT 625
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
++ K+ D GC D TYN++I + G +A + M+K D T ++
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIF-ASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
P + K+ ++ A+K+ N+F L+ S+ +D+A+ + G
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 358 -RPPPTIYVSLIESYVKSGKLETALRLWDEM-KIAGYRPNFALYTLVIESHAKSGKLDIA 415
R +I V +I K + A L+++ K G +P Y L+I ++ ++IA
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
F ++ G +P +TY LL+ + SG+ID +LY M+ T+ ++++
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 476 LANKKLVDVAAKILLE-MKAMGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
L VD A + + M +S T ++ K G + A + M G R
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
N I L K+G ++A L + V + DL Y+ ++ L
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/576 (20%), Positives = 236/576 (40%), Gaps = 112/576 (19%)
Query: 123 KIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPS 182
+ + +VK +KWGP+ + L+ L+ + V L++ + + + F+WA ++ +
Sbjct: 66 RFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHD 125
Query: 183 DDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC-NRVIQYLAKAEKLEVSF 241
Y+ L L +R + + E+V N+ VS+ A + +++ L +A+ + +
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQEVV---RNTYVSVSPAVLSELVKALGRAKMVSKAL 182
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPN 300
F + + CK + TYNS+I + + +G K E+Y M + C D+ TY +I +
Sbjct: 183 SVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISS 242
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASL---------------------------- 332
K GR D+A +LF EMK +P I+ +L
Sbjct: 243 YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT 302
Query: 333 -------VDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE------T 379
+ +GKAGR+D A + +M G P +L+ K G++E +
Sbjct: 303 VYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 380 ALRLW------------------------------DEMKIAGYRPNFALYTLVIESHAKS 409
+ +W D+MK P+ Y+++I+ + K+
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 410 GKLDIAMSAFSDMEKAGFLPTPS-----------------------------------TY 434
+++ A+ +M++ GF P P+ Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
A +++ G++ A+ L+N M N G P + Y L++ + +++ A +L +M+
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 495 MGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
G D+ + ++++ + + G A+ + SGI+ + L +G++E
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 554 AKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
A ++ + + D I Y+SIL + EK++
Sbjct: 603 AARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDD 638
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/580 (22%), Positives = 248/580 (42%), Gaps = 72/580 (12%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F ++Q G + D T+NSL+ + GL A +++ M D +Y ++ + K
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
G++D AF++ +M + P + +++++D KAGR D A+ + EMR G
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y +L+ Y K G+ E AL + EM G + + Y ++ + K GK D F++M+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ LP TY+ L++ ++ G AM+++ +AGLR + Y+ L+ L LV
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 484 VAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLAL---------------------- 520
A ++ EM G S + VT + ++ + + ++D +
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 521 --RWLRFMGSSGIRTNNFIIRQLFESCMK-SGLYESAKPLLETYVNSAAKVDLILYTSIL 577
R ++ G +NN + E + S + E + + + + K +++ +++IL
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEI----KPNVVTFSAIL 682
Query: 578 AHLVRCQEEKNERHLMSILGATKHKAHSFMCGLFTGPEHRGQPVLSFVREFFQGVDYELE 637
RC ++ L+ L +K + + GL G + V + F V+ E++
Sbjct: 683 NACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQR---ENVWLQAQSLFDKVN-EMD 738
Query: 638 EGAAKYFXXXXXXXXXXMGQI---------NRARCVWKVAYENKLFPKAIVFDQHIAWSL 688
A F GQ R+R VW+ + + L
Sbjct: 739 GSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSC--------------L 784
Query: 689 DVRNLSVGAALIAVVHTLHRFRKRMLYYGI-VPRRIKLVTG----------PTLKIVIAQ 737
D+ +S GAA A+VH + ++Y G +P+ + ++TG L+ +
Sbjct: 785 DLHLMSSGAAR-AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEV 843
Query: 738 MLSSVESPFEVSKVVL---RASGDSVMEWFKKPIVQKFLL 774
+L +++PF +SK + +SG V W ++ K L+
Sbjct: 844 LLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLI 883
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 159/358 (44%), Gaps = 2/358 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L + K+ ++ F+ G +++LI+ + GL +A ++ SM++
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 287 CLLDSSTYELMIPNLAKSG-RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+ TY +I K G K F EM+ G +P F SL+ + G ++A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ EM Y +L+++ K G+++ A + +M + PN Y+ VI+
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
AK+G+ D A++ F +M G +Y LL ++ G+ + A+ + M + G++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLR 524
+ TY LL + D K+ EMK + +T S ++ Y K G A+ R
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 525 FMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
S+G+R + + L ++ K+GL SA L++ +++ Y SI+ R
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 6/302 (1%)
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN--IFASLVDSMGK 338
S E C D TY +I L D A ++ R R + ++++ ++G+
Sbjct: 188 SFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGR 245
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
G++ A ++ GY + +LI +Y +SG E A+ +++ MK G RPN
Sbjct: 246 YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT 305
Query: 399 YTLVIESHAKSG-KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y VI++ K G + F +M++ G P T+ LL + + G + A L++ M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSV 516
TN + + +Y LL + +D+A +IL +M +V + S V+ + K G
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
D AL M GI + L K G E A +L + K D++ Y ++
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 577 LA 578
L
Sbjct: 486 LG 487
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 168/352 (47%), Gaps = 17/352 (4%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
++V+ YL A K+E++F F++++ G D TY ++ F GL +A + + M +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
C + TY +I K+ ++ A +LF+ M G P + +++L+D KAG+++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 345 AMKVHMEMRGF----------------GYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
A ++ M G RP Y +L++ + KS ++E A +L D M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+ G PN +Y +I+ K GKLD A ++M + GF T TY+ L++ + + D
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVL 507
A K+ + M P + YT ++ L D A K++ M+ G + VT + ++
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 508 MVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ G ++ L L MGS G+ N R L + C K+G + A LLE
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 155/345 (44%), Gaps = 17/345 (4%)
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
AG ++ +S + G KAF + M + D+STY ++ L + +++
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
AF LF+EMK G + + +VDS KAG ++ A K EMR G P Y +LI
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM------- 422
+Y+K+ K+ A L++ M G PN Y+ +I+ H K+G+++ A F M
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 423 ---------EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
+ P TY LL+ S +++ A KL ++M+ G P Y L+
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIR 532
L +D A ++ EM G+ + T S ++ Y K DLA + L M +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
N I ++ + K G + A L++ + +++ YT+++
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 195/459 (42%), Gaps = 32/459 (6%)
Query: 146 FVPNMTHVTQALKVVNDG---DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGV 202
F+P+ + ++ L + + + LF KR + Y ++ D ++ +
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT-YTIMVDSFCKAGLIEQA 537
Query: 203 QLLFDEM--VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYN 260
+ F+EM VG + N +V +I KA+K+ + F+ + GC + TY+
Sbjct: 538 RKWFNEMREVGCTPN-----VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 261 SLITLFLNKGLPYKAFEIYESMEKTSCLLDSS----------------TYELMIPNLAKS 304
+LI G KA +I+E M + + D TY ++ KS
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
R++ A KL M G P ++ +L+D + K G+LD A +V EM G+ Y
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
SLI+ Y K + + A ++ +M PN +YT +I+ K GK D A ME+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
G P TY +++ G+I+ ++L M + G+ P TY VL+ +DV
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 485 AAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
A +L EMK + V+ + KE L L L +G + R L +
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEIGQDDTAPFLSVYRLLID 890
Query: 544 SCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ +K+ E A LLE +A L+ Y+S L+
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSAT--LVDYSSTYNSLIE 927
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 17/347 (4%)
Query: 267 LNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGL 326
LN L A + Y M +L+ L +G+ + AF + +EM G+GF P
Sbjct: 424 LNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 327 NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
+ ++ +++ + A +++ A + EM+ G Y +++S+ K+G +E A + ++E
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
M+ G PN YT +I ++ K+ K+ A F M G LP TY+ L++ H +GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 447 IDHAMKLYNSMTNA----------------GLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
++ A +++ M + RP + TY LL V+ A K+L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
M G + D L+ + K G +D A M G + L + K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
+ A +L + ++ ++++YT ++ L + + LM ++
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 39/332 (11%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L DG +S + + L D M + + + +I L K KL+ +
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ---IVYDALIDGLCKVGKLDEAQEVKT 698
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
++ + G TY+SLI + A ++ M + SC + Y MI L K G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ D A+KL Q M+ +G +P + + +++D G G++++ +++ M G P Y
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 366 SLIESYVKSGKLETALRLWDEMK-------IAGYR------------------------- 393
LI+ K+G L+ A L +EMK AGYR
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 394 -PNFALYTLVIESHAKSGKLDIAMSAFSDME--KAGFLPTPSTYACLLEMHAASGQIDHA 450
P ++Y L+I++ K+ +L++A+ ++ A + STY L+E + +++ A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLT-LLANKKL 481
+L++ MT G+ P + ++ L+ L N K+
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 28/410 (6%)
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++I L +A E + +++ C + TY++L+ LNK + + M
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG------KA 339
C + ++ SG A+KL ++M G PG ++ L+ S+
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
LD A K + EM G S +GK E A + EM G+ P+ + Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+ V+ + K+++A F +M++ G + TY +++ +G I+ A K +N M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G P + TYT L+ K V A ++ M + G + VT S ++ + K G V+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 519 ALR-WLRFMGSSGIRTNNFIIRQ---------------LFESCMKSGLYESAKPLLETYV 562
A + + R GS + + +Q L + KS E A+ LL+
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 563 NSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSFMCGLFT 612
+ + I+Y +++ L + + + + T+ H F L+T
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEV-----KTEMSEHGFPATLYT 711
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 42/320 (13%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y L DGL + D Q + EM S + + L + +I K ++ +++
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEM---SEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
K+ + C + Y +I G +A+++ + ME+ C + TY MI
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF----- 355
G+++ +L + M +G P + L+D K G LD A + EM+
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 356 --GYR--------------------------PPPTIYVSLIESYVKSGKLETALRLWDEM 387
GYR P ++Y LI++ +K+ +LE ALRL +E
Sbjct: 849 TAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE- 907
Query: 388 KIAGYRPNF----ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
+A + + Y +IES + K++ A FS+M K G +P ++ L++
Sbjct: 908 -VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 444 SGQIDHAMKLYNSMTNAGLR 463
+ +I A+ L + +++ ++
Sbjct: 967 NSKISEALLLLDFISHMEIQ 986
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 175/483 (36%), Gaps = 61/483 (12%)
Query: 105 HVMVGDVKKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGD 164
H +V + + ++A A+A V V +G + L + + + + V + L+++
Sbjct: 88 HQVVPIITQSSIDARAIADAVSGVDDV-FGRKSQKFLRQFREKLSESLVIEVLRLIARPS 146
Query: 165 AGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC 224
A +S F WA RQ Y + Y L D + R D
Sbjct: 147 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD-------------------------- 180
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
EK+ F ++I+D D E + + + + K +F I ++E+
Sbjct: 181 ----------EKVPEEF--LQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSI--ALEE 222
Query: 285 TSCLLD------SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
L D STY +I K+ RLD+A + +EM R S+ K
Sbjct: 223 LGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCK 282
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
G+ A+ + +E F P Y LI ++ E A+ + M+ PN
Sbjct: 283 VGKWREALTL-VETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y+ ++ +L + M G P+P + L+ + SG +A KL M
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 459 NAGLRPGLSTYTVLLTLLANKK------LVDVAAKILLEMKAMGYSVD-VTASDVLMVYI 511
G PG Y +L+ + K L+D+A K EM A G ++ + S
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
G + A +R M G + ++ + E A L E D+
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 572 LYT 574
YT
Sbjct: 520 TYT 522
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 200/485 (41%), Gaps = 60/485 (12%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L GL + R F LF++MV V + VI+ L + + L + ++
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG---VIRSLCELKDLSRAKEMIAHME 254
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
GC ++ YN LI K ++A I + + D TY ++ L K +
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
++ EM F P +SLV+ + K G+++ A+ + + FG P +Y +LI
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS----------- 417
+S K K A L+D M G RPN Y+++I+ + GKLD A+S
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 418 --------------AFSDMEKA-GFL---------PTPSTYACLLEMHAASGQIDHAMKL 453
F D+ A GF+ PT TY L+ + + G+I+ A++L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIK 512
Y+ MT G+ P + T+T LL+ L L+ A K+ EM + +V++ Y +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 513 EGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLIL 572
EG + A +L+ M GI + + R L +G AK ++ +++ I
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 573 YTSILAHLVRCQEEKNERHL-------------------MSILGATKHKAHSFMCGLFTG 613
YT +L C+E K E L + I G+ KHK GL
Sbjct: 615 YTGLLHGF--CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 614 PEHRG 618
RG
Sbjct: 673 MHDRG 677
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 164/381 (43%), Gaps = 8/381 (2%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
+PS + L GL R+ LF+EM + V N +I+ + +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN---RVTYNVMIEGYCEEGDMSK 560
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+F K++ + G DT +Y LI G +A + + K +C L+ Y ++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
+ G+L+ A + QEM RG L + L+D K + EM G +P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
IY S+I++ K+G + A +WD M G PN YT VI K+G ++ A
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQID--HAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
S M+ +P TY C L++ G++D A++L+N++ GL +TY +L+
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDI-LTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 478 NKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
+ ++ A++++ M G S D +T + ++ + V A+ M GIR +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 537 IIRQLFESCMKSGLYESAKPL 557
L C +G A L
Sbjct: 859 AYNTLIHGCCVAGEMGKATEL 879
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 172/407 (42%), Gaps = 8/407 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEK 236
+SPS+ L +GL + + L +V G S N L N +I L K K
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN-----LFVYNALIDSLCKGRK 382
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ F ++ G + + TY+ LI +F +G A M T L Y
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I K G + AA EM + P + + SL+ G+++ A++++ EM G G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + +L+ ++G + A++L++EM +PN Y ++IE + + G + A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+M + G +P +Y L+ +GQ A + + YT LL
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNN 535
+ ++ A + EM G +D+ VL+ +K L L+ M G++ ++
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
I + ++ K+G ++ A + + +N + + YT+++ L +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 12/350 (3%)
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTET-YNSLITLFLNKGLPYKAFEIYESM-EKTSCLLDS 291
++ V F C++K CK+ + + ++ LI ++ +++ M K S L +
Sbjct: 138 SDVFNVLFSCYEK-----CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEV 192
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA--MKVH 349
T ++ L K A +LF +M G RP + I+ ++ S+ + L A M H
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
ME G P Y LI+ K K+ A+ + ++ +P+ Y ++ K
Sbjct: 253 MEATGCDVNIVP--YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
+ +I + +M F P+ + + L+E G+I+ A+ L + + G+ P L Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSV-DVTASDVLMVYIKEGSVDLALRWLRFMGS 528
L+ L + A + M +G DVT S ++ ++ + G +D AL +L M
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+G++ + + L K G +A+ + +N + ++ YTS++
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 109/285 (38%), Gaps = 40/285 (14%)
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRV-IQYLAKAEKLEVSFCC 243
CY L G R + + EMV GV L + C V I K + ++ F
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMV----QRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
K++ D G K D Y S+I G +AF I++ M C+ + TY +I L K
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA------------------------ 339
+G ++ A L +M+ P + +D + K
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 340 -----------GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
GR++ A ++ M G G P Y ++I + ++ A+ LW+ M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
G RP+ Y +I +G++ A ++M + G +P T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P D Y + D +++ DF ++D M+ + V V VI L KA + +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC---VPNEVTYTAVINGLCKAGFVNEA 736
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLP--YKAFEIYESMEKTSCLLDSSTYELMI 298
K+Q + TY + + L KG KA E++ ++ K L +++TY ++I
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDI-LTKGEVDMQKAVELHNAILK-GLLANTATYNMLI 794
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
+ GR++ A +L M G G P + ++++ + + + A+++ M G R
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
P Y +LI +G++ A L +EM G PN
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 167/352 (47%), Gaps = 8/352 (2%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F ++ G + TY LI G+ + FE+YE M++ + TY ++ L K
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
GR AF++F EM+ RG + + +L+ + + +L+ A KV +M+ G P
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y +LI+ + GKL AL L ++K G P+ Y +++ + G A +ME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ G P+ TY L++ A S ++ A++L SM GL P + TY+VL+ K ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 484 VAAKILLEMKAMGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
A+++ M +V + +++ Y KEGS AL+ L+ M + N R +
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMS 594
E K + A+ L+E ++S TSIL+ + R KN+ H+ S
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPS----TSILSLISRA---KNDSHVSS 565
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 35/324 (10%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI------------------------- 328
YE++I + +S L+ + F EM GF PG N
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 329 ---------FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
F L+ +AG ++ + + +E+ FG+ P IY +LI+ K G++E
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A L+ EM G N YT++I K+G + M++ G P TY C++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
G+ A ++++ M G+ + TY L+ L + ++ A K++ +MK+ G +
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 500 D-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ +T + ++ + G + AL R + S G+ + L + G A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 559 ETYVNSAAKVDLILYTSILAHLVR 582
+ K + YT ++ R
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFAR 420
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 89/221 (40%), Gaps = 2/221 (0%)
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
+Y +I SYV+S L ++ ++EM G+ P + ++ S + S F++
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
K+ + ++ L++ +G+I+ + L +T G P + YT L+ K +
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 483 DVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
+ A + EM +G + VL+ + K G M G+ N + +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 542 FESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
K G + A + + +++ Y +++ L R
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 188/421 (44%), Gaps = 9/421 (2%)
Query: 161 NDGDAGLSLFRWAK-RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLL--FDEMVGDSANSG 217
ND + L+L AK RQ Y Y ++ L RS D V LL + E+ D
Sbjct: 211 NDIEKALNLI--AKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELD 268
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
V L+ N +I AK+ + Q G T T S+I+ + G +A
Sbjct: 269 VQLV---NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
++E + ++ + Y ++ K+G L A + EM+ RG P + ++ L+D+
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
AGR +SA V EM +P ++ L+ + G+ + ++ EMK G +P+
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y +VI++ K LD AM+ F M G P T+ L++ H G+ A +++ +M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSV 516
G P +TY +++ +++ D ++L +MK+ G +V L+ VY K G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
+ A+ L M S G++ ++ + L + + GL E A + K L+ S+
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 577 L 577
+
Sbjct: 626 I 626
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 177/380 (46%), Gaps = 2/380 (0%)
Query: 208 EMVGDSANSGVSLLVAC-NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLF 266
+++G + +G+S A +I LA + + + F++++ +G K T YN+L+ +
Sbjct: 290 QLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGY 349
Query: 267 LNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGL 326
+ G A + MEK D TY L+I +GR ++A + +EM+ +P
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 327 NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
+F+ L+ G +V EM+ G +P Y +I+++ K L+ A+ +D
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
M G P+ + +I+ H K G+ +A F ME+ G LP +TY ++ + +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDV 506
D +L M + G+ P + T+T L+ + + A + L EMK++G T +
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 507 LM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
L+ Y + G + A+ R M S G++ + + L + + A +L+ +
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 566 AKVDLILYTSILAHLVRCQE 585
K D++ YT+++ L+R +
Sbjct: 650 VKPDVVTYTTLMKALIRVDK 669
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N VI K L+ + F ++ G + D T+N+LI G A E++E+ME+
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
CL ++TY +MI + R D +L +MK +G P + +LVD GK+GR +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A++ EM+ G +P T+Y +LI +Y + G E A+ + M G +P+ +I
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ + + A + M++ G P TY L++ + +Y M +G +P
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Query: 465 GLSTYTVLLTLL 476
++L + L
Sbjct: 688 DRKARSMLRSAL 699
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 7/299 (2%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEM-VGD-SANSGVSLLVACNRVIQYLAKAEKL 237
SP + Y +L D + ++ +++ EM GD NS V +R++ +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV-----FSRLLAGFRDRGEW 425
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+ +F K+++ G K D + YN +I F A ++ M D T+ +
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I K GR A ++F+ M+ RG P + +++S G R D ++ +M+ G
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P + +L++ Y KSG+ A+ +EMK G +P+ +Y +I ++A+ G + A++
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
AF M G P+ L+ + A + M G++P + TYT L+ L
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 151/336 (44%), Gaps = 8/336 (2%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L ++EKL +F +K + TYN+LI KA + M +
Sbjct: 173 LIHALGRSEKLYEAFLLSQK-----QTLTPLTYNALIGACARNNDIEKALNLIAKMRQDG 227
Query: 287 CLLDSSTYELMIPNLAKSGRLDAA--FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
D Y L+I +L +S ++D+ +L++E++ + + ++ K+G
Sbjct: 228 YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A+++ + G VS+I + SG+ A L++E++ +G +P Y +++
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLK 347
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ K+G L A S S+MEK G P TY+ L++ + +G+ + A + M ++P
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWL 523
++ LL ++ ++L EMK++G D +V++ + K +D A+
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
M S GI + L + K G + A+ + E
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+++ L+ ++G++ +L A + + P Y +LI + ++ +E AL L +M
Sbjct: 169 LYSILIHALGRSEKLYEAFLLSQKQT-----LTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAM--SAFSDMEKAGFLPTPSTYACLLEMHAASG 445
+ GY+ +F Y+LVI+S +S K+D M + ++E+ ++ A SG
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 446 QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD 505
A++L GL +T +++ LA+ A + E++ G A +
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 506 VLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNS 564
L+ Y+K G + A + M G+ + L ++ + +G +ESA+ +L+
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 565 AAKVDLILYTSILA 578
+ + +++ +LA
Sbjct: 404 DVQPNSFVFSRLLA 417
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 176/399 (44%), Gaps = 4/399 (1%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
S + Y +L DGL + R+ D + L EMV N + C I ++K +E
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC---ICVMSKEGVMEK 365
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ F + +G + Y SLI + + + +E+ M+K + ++ TY ++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
+ SG LD A+ + +EM G RP + I+ +L+ + + R AM+V EM+ G P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y SLI K+ +++ A EM G +PN Y I + ++ + A
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
+M + G LP L+ + G++ A Y SM + G+ TYTVL+ L
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFII 538
VD A +I EM+ G + DV + VL+ + K G++ A M G+ N I
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 539 RQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L +SG E AK LL+ + + Y +I+
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 184/425 (43%), Gaps = 11/425 (2%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
GDA + + + K Q +P CY L GL++++ D + EMV +
Sbjct: 469 GDA-MRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A I +A + + K++++ G + LI + KG +A Y SM
Sbjct: 527 A---FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
L D+ TY +++ L K+ ++D A ++F+EM+G+G P + + L++ K G +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A + EM G P IY L+ + +SG++E A L DEM + G PN Y +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I+ + KSG L A F +M+ G +P Y L++ ++ A+ ++ + G
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGC 762
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEM-----KAMGYSVDVTASDVLMVYIKEGSVD 517
+ + L+ + ++ ++L + G DVT + ++ KEG+++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A M ++ + L K G P+ + + + + D I+Y+ I+
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 578 AHLVR 582
++
Sbjct: 883 NAFLK 887
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 175/404 (43%), Gaps = 29/404 (7%)
Query: 176 QSWYSPSDD--CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAK 233
Q + SDD + +LFDG + +F +G V L C ++ L +
Sbjct: 142 QEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLEL---VPRLSRCKVLLDALLR 198
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLI-------TLFLNKGLPYK------------ 274
+L++ + +K + + D +TY+ LI + L K + +K
Sbjct: 199 WNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV 258
Query: 275 --AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASL 332
A ++ ESM + TY+++I L K RL+ A L EM G + ++ L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 333 VDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY 392
+D + K D+A + EM G P +Y I K G +E A L+D M +G
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 393 RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
P Y +IE + + + +M+K + +P TY +++ +SG +D A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 453 LYNSMTNAGLRPGLSTYTVLL-TLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI 511
+ M +G RP + YT L+ T L N + D A ++L EMK G + D+ + L++ +
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 512 -KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
K +D A +L M +G++ N F +++ + SA
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 161/375 (42%), Gaps = 17/375 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y +L +GL ++ D + +F EM G V + +I +K ++ + F
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV---FSYGVLINGFSKLGNMQKASSIFD 651
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
++ + G + YN L+ F G KA E+ + M ++ TY +I KSG
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH-MEMRGFGYRPPPTIY 364
L AF+LF EMK +G P ++ +LVD + ++ A+ + +G P +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP--F 769
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGY----RPNFALYTLVIESHAKSGKLDIAMSAFS 420
+LI K GK E + + + + +PN Y ++I+ K G L+ A F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M+ A +PT TY LL + G+ +++ AG+ P Y+V++ +
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 481 LVDVAAKILLEMKAMGYSVD------VTASDVLMVYIKEGSVDLALRWLRFMGS-SGIRT 533
+ A ++ +M A D T +L + K G +++A + + M I
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 534 NNFIIRQLFESCMKS 548
+ +I + ESC+ S
Sbjct: 950 SATVIELINESCISS 964
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGV--SLLVACNRVIQYLAKAEK 236
P+ Y + DG +S D LFDEM G +S V +L+ C R L E+
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR----LNDVER 750
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS---- 292
F KK GC T +N+LI G E+ L+D S
Sbjct: 751 AITIFGTNKK----GCASSTAPFNALINWVFKFGKTELKTEVLNR------LMDGSFDRF 800
Query: 293 ------TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
TY +MI L K G L+AA +LF +M+ P + + SL++ K GR
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIA---GYRPNFALYTL 401
V E G P +Y +I +++K G AL L D+M K A G + + +
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
++ AK G++++A +M + ++P +T
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 185/432 (42%), Gaps = 6/432 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRS-RDFDGVQLLFDEMVGDSANSGVSLLV 222
D LS+ A+ + P Y + D RS R+ + +F EM+ + V
Sbjct: 151 DKALSIVHLAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV---F 206
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I+ A ++V+ F K++ GC + TYN+LI + F++ SM
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ +Y ++I L + GR+ + EM RG+ + +L+ K G
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A+ +H EM G P Y SLI S K+G + A+ D+M++ G PN YT +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
++ ++ G ++ A +M GF P+ TY L+ H +G+++ A+ + M GL
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALR 521
P + +Y+ +L+ VD A ++ EM G D +T S ++ + ++ A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
M G+ + F L + G E A L V D++ Y+ ++ L
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 582 RCQEEKNERHLM 593
+ + + L+
Sbjct: 567 KQSRTREAKRLL 578
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 6/330 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LV 222
D G L R + P+ Y ++ +GL R V + EM G SL V
Sbjct: 257 DDGFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEM----NRRGYSLDEV 311
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I+ K + ++ G TY SLI G +A E + M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ TY ++ ++ G ++ A+++ +EM GF P + + +L++ G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
+ A+ V +M+ G P Y +++ + +S ++ ALR+ EM G +P+ Y+ +
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I+ + + A + +M + G P TY L+ + G ++ A++L+N M G+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
P + TY+VL+ L + A ++LL++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 146/344 (42%), Gaps = 39/344 (11%)
Query: 278 IYESMEKTS--CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGL--------- 326
+++S+++T C SS ++L++ + ++ +D A + + GF PG+
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 327 ------------NIFASLVDSMGK---------------AGRLDSAMKVHMEMRGFGYRP 359
N+F +++S AG +D A+ + +M G P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y +LI+ Y K K++ +L M + G PN Y +VI + G++
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
++M + G+ TY L++ + G A+ ++ M GL P + TYT L+ +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 480 KLVDVAAKILLEMKAMGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFII 538
++ A + L +M+ G + T + ++ + ++G ++ A R LR M +G +
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 539 RQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L +G E A +LE D++ Y+++L+ R
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 147/370 (39%), Gaps = 19/370 (5%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P++ Y L DG ++ + + EM + + V V N +I K+E +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV---VTYNALINGHCVTGKMEDA 434
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
+ +++ G D +Y+++++ F +A + M + D+ TY +I
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+ R A L++EM G P + +L+++ G L+ A+++H EM G P
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK------------ 408
Y LI K + A RL ++ P+ Y +IE+ +
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 409 ---SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
G + A F M P + Y ++ H +G I A LY M +G
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 466 LSTYTVLLTLLANK-KLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLR 524
T L+ L + K+ ++ + I+ +++ S A ++ + +EG++D+ L L
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 525 FMGSSGIRTN 534
M G N
Sbjct: 735 EMAKDGFLPN 744
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 199/437 (45%), Gaps = 15/437 (3%)
Query: 98 VEPGLDDHVMVGDVKKPFMNALAVAKIVEVVKRWKWGPELDTQLDK------LQFVPN-M 150
+EP D V D+ K N L + +++ +++ LD ++ PN +
Sbjct: 64 IEPFND----VSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFV 119
Query: 151 THVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV 210
+ V ++ ++ D S F W+++Q Y+ + +CYV L D L ++D D ++ + E+
Sbjct: 120 SFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIK 179
Query: 211 GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
VS A N +I+ K +E ++K+++ G + TYN L+ ++
Sbjct: 180 KFEFPMTVS---AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
A ++E ME D TY MI K+G+ A + ++M+ RG +
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+++ + S + ++ EM G + PP + +I K GKL +++ M
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G +PN A+YT++I+ +AKSG ++ A+ M GF P TY+ ++ +G+++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-V 509
+ +++ GL Y+ L+ L VD A ++ EM G + D + L+
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 510 YIKEGSVDLALRWLRFM 526
+ K VD A+ + M
Sbjct: 477 FTKHRKVDEAIALFKRM 493
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
++++ + G ++ ++ +I +G + + ++E+M + + + Y ++I AK
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
SG ++ A +L M GF+P + ++ +V+ + K GR++ A+ R G
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y SLI+ K+G+++ A RL++EM G + Y +I++ K K+D A++ F ME
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 424 KA-GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
+ G T TY LL + + A+KL++ M + G+ P + + L T L V
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 483 DVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALR 521
A KIL E+ MG +D D++ K G + A +
Sbjct: 555 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACK 593
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 12/353 (3%)
Query: 150 MTHVTQALKVVNDGDAG--LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFD 207
+T++T D D G ++L++ + P + ++ GL + + +F+
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH-AFSLVIGGLCKEGKLNEGYTVFE 351
Query: 208 EMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFL 267
M+ + V++ +I AK+ +E + ++ D G K D TY+ ++
Sbjct: 352 NMIRKGSKPNVAIYTV---LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 268 NKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN 327
G +A + + + ++S Y +I L K+GR+D A +LF+EM +G
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGF-GYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
+ +L+D+ K ++D A+ + M G Y L+ K + E AL+LWD
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC--LLEMHAAS 444
M G P A + + SGK+ A ++ G + AC ++ +
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA---ACEDMINTLCKA 585
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
G+I A KL + +T G TV++ L D+A K++ +GY
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 2/277 (0%)
Query: 308 DAAFKLF-QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
D A+ F K + + L + SLVD + A +D V E++ F + + +
Sbjct: 133 DIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANA 192
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+S+ K G +E L +W +MK G P Y ++ + +D A F ME
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY +++ + +GQ AM+ M G TY ++
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 487 KILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
+ EM G V A S V+ KEG ++ M G + N I L +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
KSG E A LL ++ K D++ Y+ ++ L +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 197/459 (42%), Gaps = 24/459 (5%)
Query: 128 VKRWKWGPELDTQLDKLQFVPNMTHVTQALKV------VND-----------GD--AGLS 168
V++ K+ ++++ ++KL +P + + L + +ND GD L
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLR 126
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVI 228
LF++ +RQ W P++ Y ++ L R D +FDEM + V A +I
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA---LI 183
Query: 229 QYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF-EIYESMEKTSC 287
+ + E S ++++ TYN++I GL ++ ++ M
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
D TY ++ A G D A +F+ M G P L ++ LV++ GK RL+
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
+ EM G P T Y L+E+Y KSG ++ A+ ++ +M+ AG PN Y++++
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLS 467
+SG+ D F +M+ + P +TY L+E+ G + L++ M + P +
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 468 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFM 526
TY ++ L + A KIL M A A + V+ + + + AL M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 527 GSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
G + L S + GL + ++ +L V+S
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 3/292 (1%)
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF-RPGLNIFASLVDSMGKAGRLDSAMK 347
L + + L+ A G + +LF+ M+ + + +P +I+ ++ +G+ G LD ++
Sbjct: 103 LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
V EM G Y +LI +Y ++G+ ET+L L D MK P+ Y VI + A
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 408 KSG-KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+ G + + F++M G P TY LL A G D A ++ +M + G+ P L
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRF 525
+TY+ L+ + ++ +L EM + G D+T+ +VL+ Y K GS+ A+
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 526 MGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
M ++G N L +SG Y+ + L +S D Y ++
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL--LVACNRVIQYLAKAEKLE 238
P Y L + + R + V L EM SG SL + + N +++ AK+ ++
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMA-----SGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ F ++Q AGC + TY+ L+ LF G +++ M+ ++ D++TY ++I
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
+ G LF +M P + + ++ + GK G + A K+ M
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y +IE++ ++ E AL ++ M G P+ + ++ S A+ G + + +
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI 514
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
S + +G T+ +E + G+ + A+K Y M + P T +L++ +
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSF 574
Query: 479 KKLVDVAAKILLEMKA 494
+LVD + EMKA
Sbjct: 575 ARLVDECREQFEEMKA 590
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 203/523 (38%), Gaps = 41/523 (7%)
Query: 208 EMVGDSANSG--VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL 265
EMV + N G V L + +++ K +LE ++ G D +YN L+
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 266 FLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG 325
+ G +A ++ M+ C +++TY +++ +SGR D +LF EMK P
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 326 LNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD 385
+ L++ G+ G + + +M P Y +I + K G E A ++
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 386 EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASG 445
M P+ YT VIE+ ++ + A+ AF+ M + G P+ T+ LL A G
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Query: 446 QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TAS 504
+ + + + + ++G+ T+ + + A K ++M+ D T
Sbjct: 507 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Query: 505 DVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNS 564
VL VY VD M +S I + + K+ ++ LLE +++
Sbjct: 567 AVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Query: 565 AAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSFMCGLFTGPEHRGQPVLSF 624
+V I ++ +++ + + I+ K +S CGL
Sbjct: 627 --RVSNI--HQVIGQMIKGDYDDDSN--WQIVEYVLDKLNSEGCGL-------------- 666
Query: 625 VREFFQGVDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHI 684
G+ F +GQ RA V A + LFP+ + +
Sbjct: 667 ------GI----------RFYNALLDALWWLGQKERAARVLNEATKRGLFPE-LFRKNKL 709
Query: 685 AWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGIVPRRIKLVT 727
WS+DV +S G A+ L+ ML G +P+ +V+
Sbjct: 710 VWSVDVHRMSEGGMYTALSVWLNDIND-MLLKGDLPQLAVVVS 751
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 169/387 (43%), Gaps = 6/387 (1%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
V++ +++ + + + GC ++ Y +LI +A ++ E M
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
C+ D+ T+ +I L K R++ A K+ M RGF P + L++ + K GR+D+A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA-GYRPNFALYTLVIES 405
+ + +P I+ +LI +V G+L+ A + +M + G P+ Y +I
Sbjct: 343 DLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+ K G + +A+ DM G P +Y L++ G+ID A + N M+ GL+P
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDLALRWLR 524
+ L++ + + A +I EM G DV + L+ + E + AL LR
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 525 FMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQ 584
M S G+ N L + ++ G + A+ L+ V + +D I Y S++ L R
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 585 EEKNERHLMSILGATKHKAHSFMCGLF 611
E R L + H + C +
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNIL 605
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 171/399 (42%), Gaps = 51/399 (12%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L CNRV + L E++ + GC D ET+N +I +A ++
Sbjct: 262 LSKCNRVNEALQLLEEMFL----------MGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M D TY ++ L K GR+DAA LF + +P + IF +L+ G
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHG 367
Query: 341 RLDSAMKVHMEM-RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
RLD A V +M +G P Y SLI Y K G + AL + +M+ G +PN Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
T++++ K GK+D A + ++M G P + CL+ +I A++++ M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G +P + T+ L++ L + A +L +M + G + VT + ++ +++ G +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 519 ALRWLR---FMGS--SGIRTNNFI-----------IRQLFE------------SC----- 545
A + + F GS I N+ I R LFE SC
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 546 --MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+SG+ E A + V + D++ + S++ L R
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 175/427 (40%), Gaps = 20/427 (4%)
Query: 135 PELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLN 194
P+ +T D + + + +A K+VN R R ++P D Y L +GL
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVN---------RMLIRG--FAPDDITYGYLMNGLC 333
Query: 195 RSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK-IQDAGCK 253
+ D + LF + +V N +I +L+ + + G
Sbjct: 334 KIGRVDAAKDLFYRIPKPE-------IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
D TYNSLI + +GL A E+ M C + +Y +++ K G++D A+ +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
EM G +P F L+ + K R+ A+++ EM G +P + SLI +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
+++ AL L +M G N Y +I + + G++ A ++M G T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
Y L++ +G++D A L+ M G P + +L+ L +V+ A + EM
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 494 AMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
G + D VT + ++ + G ++ L R + + GI + L K G
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 553 SAKPLLE 559
A LL+
Sbjct: 687 DACLLLD 693
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 128/309 (41%), Gaps = 3/309 (0%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
R P+ Y +L DG + D + +EM D V N +I K
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT---VGFNCLISAFCKE 472
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
++ + F+++ GCK D T+NSLI+ A + M + ++ TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
+I + G + A KL EM +G + SL+ + +AG +D A + +M
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G+ P LI +SG +E A+ EM + G P+ + +I ++G+++
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
++ F ++ G P T+ L+ G + A L + G P T+++LL
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 475 LLANKKLVD 483
+ ++ +D
Sbjct: 713 SIIPQETLD 721
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 163/424 (38%), Gaps = 47/424 (11%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
+ LF W Q+ Y S D Y +L L + +F + L +M
Sbjct: 95 MELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM----------------- 137
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT- 285
+D G + S++ + G P + + M
Sbjct: 138 ---------------------KDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
SC +Y +++ L A +F +M R P L F ++ + +DSA
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ + +M G P IY +LI S K ++ AL+L +EM + G P+ + VI
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
K +++ A + M GF P TY L+ G++D A L+ + +P
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPE 352
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEM-KAMGYSVDV-TASDVLMVYIKEGSVDLALRWL 523
+ + L+ +D A +L +M + G DV T + ++ Y KEG V LAL L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRC 583
M + G + N + L + K G + A +L K + + + +++ C
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF--C 470
Query: 584 QEEK 587
+E +
Sbjct: 471 KEHR 474
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 3/233 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I L + ++++ + + + G +T TYN+LI FL +G +A ++ M
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS-LVDSMGKAGRLD 343
LD TY +I L ++G +D A LF++M G P NI + L++ + ++G ++
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS-NISCNILINGLCRSGMVE 616
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A++ EM G P + SLI ++G++E L ++ +++ G P+ + ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
K G + A + + GF+P T++ LL+ +D + YN+
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR-RFYNA 728
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 122/271 (45%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
++ K K++ ++ ++ G K +T +N LI+ F + +A EI+ M +
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
C D T+ +I L + + A L ++M G + +L+++ + G + A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
K+ EM G Y SLI+ ++G+++ A L+++M G+ P+ ++I
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+SG ++ A+ +M G P T+ L+ +G+I+ + ++ + G+ P
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
T+ L++ L V A +L E G+
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 7/339 (2%)
Query: 267 LNKGLPYKA-FEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG 325
LNK Y+A ++ +E D ++ +I + RL A +M GF P
Sbjct: 92 LNK---YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPS 148
Query: 326 LNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD 385
+ F SLV+ R AM + ++ G GY P IY ++I+S + G++ TAL +
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 386 EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASG 445
MK G RP+ Y +I SG ++ SDM + G P T++ L++++ G
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 446 QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTAS 504
Q+ A K YN M + P + TY L+ L L+D A K+L + + G+ + VT +
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 505 DVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNS 564
++ Y K VD ++ L M G+ + F L++ ++G + +A+ +L V+
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 565 AAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKA 603
D+ + +L L C K + L+ + K K
Sbjct: 389 GVHPDMYTFNILLDGL--CDHGKIGKALVRLEDLQKSKT 425
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 160/380 (42%), Gaps = 14/380 (3%)
Query: 208 EMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFL 267
EM+G S + L + +I + +L ++ C K+ G + T+ SL+ F
Sbjct: 106 EMLGISHD-----LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 268 NKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN 327
+ Y+A + + + + Y +I +L + G+++ A + + MK G RP +
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+ SL+ + +G + ++ +M G P + +LI+ Y K G+L A + ++EM
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
PN Y +I G LD A + + GF P TY L+ + + ++
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVL 507
D MK+ M+ G+ TY L A K+L M + G D+ ++L
Sbjct: 341 DDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 508 MVYI-KEGSVDLALRWLRFMGSS----GIRTNNFIIRQLFESCMKSGLYESAKPLLETYV 562
+ + G + AL L + S GI T N II+ L K+ E A L +
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL----CKADKVEDAWYLFCSLA 456
Query: 563 NSAAKVDLILYTSILAHLVR 582
D+I Y +++ L R
Sbjct: 457 LKGVSPDVITYITMMIGLRR 476
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 3/335 (0%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ PS + L +G F L D++VG V V N +I L + ++
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNV---VIYNTIIDSLCEKGQVN 201
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ K ++ G + D TYNSLIT + G + I M + D T+ +I
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
K G+L A K + EM R P + + SL++ + G LD A KV + G+
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y +LI Y K+ +++ +++ M G + Y + + + ++GK A
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
M G P T+ LL+ G+I A+ + + G+ TY +++ L
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE 513
V+ A + + G S DV +M+ ++
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 5/277 (1%)
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV--HMEMRGFGYRPPP 361
S + + A LF +M P + F+ L+ ++ K + ++ + + H+EM G +
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
+ +LI+ + + +L AL +M G+ P+ + ++ + AMS
Sbjct: 117 --FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
+ G+ P Y +++ GQ++ A+ + M G+RP + TY L+T L +
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 482 VDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
V+A+IL +M MG S DV T S ++ VY KEG + A + M + N
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L GL + AK +L V+ + + Y +++
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 6/339 (1%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
SPS Y +L DGL + D V L D M V V N +I L KL+
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF---LKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ +++ + C + TY +LI + + A + SME+ L+ Y ++I
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
L K G+ + A L+++M +G +P + +++ LVD + + G+ + A ++ M G P
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y SL++ + K+G E A+++W EM G N Y+++I+ G++ AM +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM---TNAGLRPGLSTYTVLLTLL 476
S M G P Y+ +++ G +D A+KLY+ M +P + TY +LL L
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS 515
+K + A +L M G DV + + + E S
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 196/475 (41%), Gaps = 61/475 (12%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM-VGDSANSGVSLLVACNRV 227
+F+ A + + D + + S DFD V+ L + + + S +V V
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIV----V 118
Query: 228 IQYLAKAEKLEVSFCCFKKIQDA-GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+ KA + + F ++ D CK +++NS++ + +N+GL ++ E Y+ + ++
Sbjct: 119 FRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 287 CLLDSS----TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
++ S ++ L+I L K +D A ++F+ M R P + +L+D + K R+
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D A+ + EM+ G P P IY LI+ K G L +L D M + G PN Y +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL------------------------- 437
I GKLD A+S M + +P TY L
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 438 -LEMHAAS---------GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
L H S G+ + AM L+ M G +P + Y+VL+ L + + A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 488 ILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
IL M A G + T S ++ + K G + A++ + M +G N F L +
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 547 KSGLYESAKPLLETYVNSAAKVDLILYTSI---------------LAHLVRCQEE 586
G + A + + K D + Y+SI L H + CQEE
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 12/358 (3%)
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
L K E+++ + ++Q GC YN LI KG + ++ ++M C+ +
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY +I L G+LD A L + M P + +L++ + K R A+++
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
M GY IY LI K GK E A+ LW +M G +PN +Y+++++ + G
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
K + A + M +G LP TY+ L++ +G + A++++ M G Y+
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFM--- 526
VL+ L V A + +M +G D A S ++ GS+D AL+ M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 527 ----GSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ T N ++ L CM+ + A LL + ++ D+I + L L
Sbjct: 532 EEPKSQPDVVTYNILLDGL---CMQKDI-SRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 44/358 (12%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSA---NSGVSLLVACNRVIQYLAKAEKL 237
P Y + + + RDF GV+ + M D +LL+ + ++ AEKL
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
F ++++ G + D Y SLI+ KG +AF +++ + + S TY +
Sbjct: 317 ------FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH--MEMRGF 355
I + K G + AA L EM+ +G +F +L+D + G +D A ++ ME +GF
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 356 ---------------------------------GYRPPPTIYVSLIESYVKSGKLETALR 382
G + Y +LI+ Y K G +E A R
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
L+ EM G +PN Y ++I ++ K GK+ A ++ME G P TY L+
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
+ +D AM+L++ M GL TYTV+++ L+ D A + EMK GY++D
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 199/461 (43%), Gaps = 46/461 (9%)
Query: 160 VNDG--DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSG 217
V++G + GL +F + ++ C V L R R D +F MV +SG
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRR-IDLCLEIFRRMV----DSG 219
Query: 218 VSLLV-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
V + V + V++ L + ++E S K+ G K + TYN++I ++ K +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV-KQRDFSGV 278
Query: 277 E-IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS 335
E + + M+K + + TY L++ K+G++ A KLF EM+ RG ++++ SL+
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 336 MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
+ G + A + E+ G P Y +LI+ K G++ A L +EM+ G
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 396 FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP-------------------------- 429
++ +I+ + + G +D A + ME+ GF
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 430 ---------TPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
+ +Y L++++ G ++ A +L+ M++ G++P TY V++ +
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 481 LVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+ A K+ M+A G D T + ++ +VD A+R MG G+ N+
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ K+G + A L + +D +YT+++ +
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 1/333 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
EI+ M + + + +++ L + G ++ + KL +E +G +P + ++++
Sbjct: 208 CLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIIN 267
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ K V M+ G Y L+E VK+GK+ A +L+DEM+ G
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ +YT +I + + G + A F ++ + G P+ TY L++ G++ A L
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKE 513
N M + G+ + L+ K +VD A+ I M+ G+ DV T + + + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
D A +WL M G++ + L + K G E AK L + + + I Y
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 574 TSILAHLVRCQEEKNERHLMSILGATKHKAHSF 606
++ + + K R L + + A S+
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 3/322 (0%)
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
++++ G+ + +++ M K +D + + + K R+D ++F+ M G +
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
+ +V+ + + G ++ + K+ E G +P Y ++I +YVK +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
MK G N YTL++E K+GK+ A F +M + G Y L+ +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS 504
G + A L++ +T GL P TY L+ + + A ++ EM++ G ++
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 505 DVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVN 563
+ L+ Y ++G VD A M G + + F + + Y+ AK L +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 564 SAAKVDLILYTSILAHLVRCQE 585
K+ + YT+++ V C+E
Sbjct: 463 GGVKLSTVSYTNLID--VYCKE 482
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 3/371 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I K + ++++ ++ +I ET+ LI ++ GL +A + ME
Sbjct: 155 NEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED 214
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
C+ D + ++I NL++ R A F +K R F P + ++ +LV +AG +
Sbjct: 215 YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISE 273
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A KV EM+ G P Y +I++ + G++ A ++ +M +G PN + ++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
H K+G+ + + ++ M+K G P TY L+E H +++A+K+ N+M
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWL 523
ST+ + + K+ V+ A ++ +M + ++LM +++ S D+ L+
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV-DLILYTSILAHLVR 582
+ M + N R L G + +A L + V L LY +LA L R
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 583 CQEEKNERHLM 593
+ K L+
Sbjct: 514 AGQLKKHEELV 524
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 159/359 (44%), Gaps = 9/359 (2%)
Query: 139 TQLDKLQFVPNMTH-VTQALKVVNDG---DAGLSLFRWA-KRQSWYSPSDDCYVMLFDGL 193
+Q++ Q P++ V + V G L+ F WA R + S Y + D
Sbjct: 102 SQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLS 161
Query: 194 NRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK 253
+ R FD L D M + + +I+ +A + CF +++D GC
Sbjct: 162 GKVRQFDLAWHLIDLMKSRNVEISIETFTI---LIRRYVRAGLASEAVHCFNRMEDYGCV 218
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
D ++ +I+ K +A ++S+ K D Y ++ ++G + A K+
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKV 277
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
F+EMK G P + ++ ++D++ + G++ A V +M G P + +L+ +VK
Sbjct: 278 FKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVK 337
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
+G+ E L+++++MK G P+ Y +IE+H + L+ A+ + M K ST
Sbjct: 338 AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAST 397
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+ + ++ A ++Y+ M A P TY +L+ + K D+ K+ EM
Sbjct: 398 FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 186/444 (41%), Gaps = 8/444 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEK 236
Y+P Y + +G R + D V L + M G NS + +I L + K
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY-----GSIIGLLCRICK 331
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
L + F ++ G DT Y +LI F +G A + + M D TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I + G + A KLF EM +G P F L++ KAG + A +VH M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P Y +LI+ K G L++A L EM G +PN Y ++ KSG ++ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ E AG TY L++ + SG++D A ++ M GL+P + T+ VL+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNN 535
+++ K+L M A G + + T + L+ Y ++ A + M S G+ +
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSI 595
L + K+ + A L + V + Y+ ++ ++ ++ R +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 596 LGATKHKAHSFMCGLFTGPEHRGQ 619
+ A + F+ +++G+
Sbjct: 692 MRREGLAADKEIFDFFSDTKYKGK 715
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 1/335 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N VI ++ + +++ + ++ G D +Y++++ + G K +++ E M++
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+S Y +I L + +L A + F EM +G P ++ +L+D K G + +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A K EM P Y ++I + + G + A +L+ EM G P+ +T +I
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ K+G + A + M +AG P TY L++ G +D A +L + M GL+P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWL 523
+ TY ++ L ++ A K++ E +A G + D VT + ++ Y K G +D A L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ M G++ L G+ E + LL
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 7/359 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYK---AFEIYESMEKTSCLLDSSTYELMIPN 300
F+K+ + G + ++ N +T L+K YK A ++ + + ++Y ++I
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTR-LSKDC-YKTATAIIVFREFPEVGVCWNVASYNIVIHF 255
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+ + GR+ A L M+ +G+ P + ++++V+ + G LD K+ M+ G +P
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
IY S+I + KL A + EM G P+ +YT +I+ K G + A F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
+M P TY ++ G + A KL++ M GL P T+T L+
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+ A ++ M G S +V L+ + KEG +D A L M G++ N F
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE-EKNERHLMSILG 597
+ KSG E A L+ + + D + YT+++ + E +K + L +LG
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 7/253 (2%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAK 233
Q+ SP+ Y L DGL + D D L EM +G N + N ++ L K
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-----IFTYNSIVNGLCK 503
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
+ +E + + + AG DT TY +L+ + G KA EI + M T
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ +++ G L+ KL M +G P F SLV L +A ++ +M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G P Y +L++ + K+ ++ A L+ EMK G+ + + Y+++I+ K K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 414 IAMSAFSDMEKAG 426
A F M + G
Sbjct: 684 EAREVFDQMRREG 696
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L D +S + D Q + EM+G + V N ++ LE
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI---VTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G + T+NSL+ + + A IY+ M D TYE ++ K+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A+ LFQEMKG+GF ++ ++ L+ K + A +V +MR G I+
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 366 SLIESYVKSGKLETALRLWDEM 387
++ K + +T + DE+
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEI 727
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 186/444 (41%), Gaps = 8/444 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEK 236
Y+P Y + +G R + D V L + M G NS + +I L + K
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY-----GSIIGLLCRICK 331
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
L + F ++ G DT Y +LI F +G A + + M D TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I + G + A KLF EM +G P F L++ KAG + A +VH M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P Y +LI+ K G L++A L EM G +PN Y ++ KSG ++ A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ E AG TY L++ + SG++D A ++ M GL+P + T+ VL+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNN 535
+++ K+L M A G + + T + L+ Y ++ A + M S G+ +
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSI 595
L + K+ + A L + V + Y+ ++ ++ ++ R +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 596 LGATKHKAHSFMCGLFTGPEHRGQ 619
+ A + F+ +++G+
Sbjct: 692 MRREGLAADKEIFDFFSDTKYKGK 715
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 1/335 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N VI ++ + +++ + ++ G D +Y++++ + G K +++ E M++
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+S Y +I L + +L A + F EM +G P ++ +L+D K G + +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A K EM P Y ++I + + G + A +L+ EM G P+ +T +I
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ K+G + A + M +AG P TY L++ G +D A +L + M GL+P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWL 523
+ TY ++ L ++ A K++ E +A G + D VT + ++ Y K G +D A L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ M G++ L G+ E + LL
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 7/359 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYK---AFEIYESMEKTSCLLDSSTYELMIPN 300
F+K+ + G + ++ N +T L+K YK A ++ + + ++Y ++I
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTR-LSKDC-YKTATAIIVFREFPEVGVCWNVASYNIVIHF 255
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+ + GR+ A L M+ +G+ P + ++++V+ + G LD K+ M+ G +P
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
IY S+I + KL A + EM G P+ +YT +I+ K G + A F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
+M P TY ++ G + A KL++ M GL P T+T L+
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+ A ++ M G S +V L+ + KEG +D A L M G++ N F
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE-EKNERHLMSILG 597
+ KSG E A L+ + + D + YT+++ + E +K + L +LG
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 7/253 (2%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAK 233
Q+ SP+ Y L DGL + D D L EM +G N + N ++ L K
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN-----IFTYNSIVNGLCK 503
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
+ +E + + + AG DT TY +L+ + G KA EI + M T
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ +++ G L+ KL M +G P F SLV L +A ++ +M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G P Y +L++ + K+ ++ A L+ EMK G+ + + Y+++I+ K K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 414 IAMSAFSDMEKAG 426
A F M + G
Sbjct: 684 EAREVFDQMRREG 696
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L D +S + D Q + EM+G + V N ++ LE
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI---VTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G + T+NSL+ + + A IY+ M D TYE ++ K+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A+ LFQEMKG+GF ++ ++ L+ K + A +V +MR G I+
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 366 SLIESYVKSGKLETALRLWDEM 387
++ K + +T + DE+
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEI 727
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 1/336 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
ACN +I L + +E+++ +++I +G I+ T N ++ G K +
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
++ D TY +I + G ++ AF+L M G+GF PG+ + ++++ + K G+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
+ A +V EM G P T Y SL+ K G + +++ +M+ P+ ++ +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ +SG LD A+ F+ +++AG +P Y L++ + G I AM L N M G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALR 521
+ TY +L L +K++ A K+ EM D +L+ + K G++ A+
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
+ M IR + L + K G ++AK +
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 204/467 (43%), Gaps = 25/467 (5%)
Query: 116 MNALAVAKIVEVVKRWKWGPELDTQ-LDKLQF-VPNMTHVTQALKVVNDGDAGLSLFRWA 173
+N LAV VEV+ R + L + +D+L F PN H + +L ++
Sbjct: 76 LNPLAV---VEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLS---------AMIHIL 123
Query: 174 KRQSWYSPSDDCYVMLF--DGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYL 231
R S + C + + G++R + + F S +S LL I+
Sbjct: 124 VRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC--GSNDSVFDLL------IRTY 175
Query: 232 AKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS 291
+A KL + F ++ G + + N+LI + G A+ +Y+ + ++ ++
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
T +M+ L K G+++ +++ +G P + + +L+ + G ++ A ++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
M G G+ P Y ++I K GK E A ++ EM +G P+ Y ++ K G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV 471
+ FSDM +P ++ ++ + SG +D A+ +NS+ AGL P YT+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
L+ K ++ VA + EM G ++D VT + +L K + A + M
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ +++ + L + K G ++A L + ++D++ Y ++L
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 168/412 (40%), Gaps = 49/412 (11%)
Query: 214 ANSGVSLLV-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLP 272
+ SGV + V N ++ L K K+E ++Q+ G D TYN+LI+ + +KGL
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 273 YKAFE-----------------------------------IYESMEKTSCLLDSSTYELM 297
+AFE ++ M ++ DS+TY +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ K G + K+F +M+ R P L F+S++ ++G LD A+ ++ G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P IY LI+ Y + G + A+ L +EM G + Y ++ K L A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
F++M + P T L++ H G + +AM+L+ M +R + TY LL
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 478 NKKLVDVAAKILLEMKA-------MGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
+D A +I +M + + YS+ V A +G + A R M S
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNA------LCSKGHLAEAFRVWDEMISKN 580
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
I+ I + + +SG + LE ++ D I Y +++ VR
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 2/276 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+IQ + + V+ ++ GC +D TYN+++ + + +A +++ M + +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
DS T ++I K G L A +LFQ+MK + R + + +L+D GK G +D+A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
++ +M P P Y L+ + G L A R+WDEM +P + +I+ +
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM--TNAGLRP 464
+SG S M GF+P +Y L+ + A L M GL P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
+ TY +L + + A +L +M G + D
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 142/310 (45%), Gaps = 3/310 (0%)
Query: 276 FEIYESMEKT--SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
EI S++ T +C + S ++L+I ++ +L A + F ++ +GF ++ +L+
Sbjct: 148 LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI 207
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
S+ + G ++ A V+ E+ G ++ + K GK+E +++ G
Sbjct: 208 GSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 267
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
P+ Y +I +++ G ++ A + M GF P TY ++ G+ + A ++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIK 512
+ M +GL P +TY LL K V K+ +M++ D V S ++ ++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 513 EGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLIL 572
G++D AL + + +G+ +N I L + + G+ A L + +D++
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 573 YTSILAHLVR 582
Y +IL L +
Sbjct: 448 YNTILHGLCK 457
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 164/382 (42%), Gaps = 10/382 (2%)
Query: 172 WAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL---LVACNRVI 228
W R+ SP + + +GL R R FD V + + M+ V + L C
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 229 QYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCL 288
+K EKL ++ G K + Y I +A +++E M+K L
Sbjct: 213 GLYSKKEKL------LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL 266
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
+ TY MI K+G + A+ L++E+ P + +F +LVD KA L +A +
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+ M FG P +Y LI + KSG + A+ L EM+ P+ YT++I
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
++ A F M+ P+ +TY L+ + ++ A+ L + MT +G+ P + T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMG 527
++ L+ N + + A + EM G DV L+ + KE ++ ALR M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 528 SSGIRTNNFIIRQLFESCMKSG 549
+GI N+ L + K G
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEG 528
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 147/342 (42%), Gaps = 8/342 (2%)
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
KA +L + F + G + YN LI G +A + ME + D
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY ++I L ++ A +LFQ+MK P + SL+ K ++ A+ +
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
EM G P + +LI+ Y ++ A+ L+ EM I G P+ YT +I++H K
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+ A+ +SDM +AG P T+ACL++ G++ A+ Y +T
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFT 553
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSS 529
L+ L + A++ +M++ G + D+ + +L +++E + + M +
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Query: 530 GIRTNNFIIRQLF------ESCMKSGLYESAKPLLETYVNSA 565
GI N ++ QL +KS + + L+T NS
Sbjct: 614 GILP-NLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSNSC 654
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 3/277 (1%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
SP Y +L +GL LF +M + + N +I K +E
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY---NSLIHGYCKEYNMEQ 427
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ ++ +G + + T+++LI + N A +Y M + D TY +I
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
K + A +L+ +M G P + FA LVD K GRL A+ + E
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
+ LIE ++G + A R + +M+ G P+ Y +++ H + ++ M
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
DM K G LP L + A+G + A L NS
Sbjct: 608 CDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNS 644
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 181/402 (45%), Gaps = 8/402 (1%)
Query: 158 KVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSG 217
K+ N G LS+F+WA+ Q + + Y L + L + + F + L D+M S
Sbjct: 103 KLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK 162
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
+ + R A+A K++ + F K+++ G K+++ +N ++ A +
Sbjct: 163 ETFALISRR----YARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQK 218
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
+++ M+K D +Y +++ + L ++ +EMK GF P + + ++++
Sbjct: 219 VFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHC 278
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
KA + + A++ EM +P P I+ SLI KL AL ++ K +G+
Sbjct: 279 KAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y ++ ++ S +++ A +M G P TY +L + A ++Y +M
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSV 516
+ P +STY +++ + NK+ +D+A KI EMK G + S ++ E +
Sbjct: 399 S---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKL 455
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
D A + M GIR + +L ++ + G + L+
Sbjct: 456 DEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 8/300 (2%)
Query: 158 KVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSG 217
K N GDA + K++ + P Y +L +G + + V + EM +
Sbjct: 209 KSRNVGDAQKVFDKMKKKR--FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPD 266
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
V VA +I KA+K E + F +++ CK + SLI ++ A E
Sbjct: 267 V---VAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
+E + + L++ TY ++ S R++ A+K EM+ +G P + ++ +
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
+ R A +V+ M P + Y ++ + +L+ A+++WDEMK G P
Sbjct: 384 RMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
+++ +I + KLD A F++M G P ++ L + G+ D L M
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ L +A KL+ +F K+I GC +D +YN+LI+ K +AF + M K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
D+ TY ++I L +++ A + + + K G P + ++ ++D KA R +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ EM +P +Y LI +Y +SG+L AL L ++MK G PN A YT +I+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ +++ A F +M G P Y L++ + GQ+ L M + + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSV 516
TYTV++ A V A+++L EM+ G D +T + + Y+K+G V
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 199 FDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTET 258
FD EM+ + + G LL +I L K K + + + + G +DT T
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N+L+ G +AF I + + C++D +Y +I +LD AF EM
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
RG +P ++ L+ + +++ A++ + + G P Y +I+ K+ + E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+DEM +PN +Y +I ++ +SG+L +A+ DM+ G P +TY L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN-KKLVDVAAKILLEMKAMG- 496
+ + +++ A L+ M GL P + YT L+ ++V V +L EM +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSKNV 746
Query: 497 YSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+ +T + ++ Y ++G+V A R L M GI ++ ++ +K G
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 8/362 (2%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK---IDTETYNSLITLFLNKGLPYKAFEIY 279
CN ++ L +A E CC + D CK D + + I F G +A +++
Sbjct: 228 TCNILLTSLVRAN--EFQKCC--EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 283
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
ME+ + T+ +I L GR D AF ++M RG P L ++ LV + +A
Sbjct: 284 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 343
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A V EM G+ P +Y +LI+S++++G L A+ + D M G + Y
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I+ + K+G+ D A +M GF ++ ++ + + D A++ M
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDL 518
+ PG T L++ L A ++ + G+ VD S+ L+ + E G +D
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
A R + + G + L C + A L+ V K D Y+ ++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 579 HL 580
L
Sbjct: 584 GL 585
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 4/403 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
++ +P+ + + DGL +D + ++MV L+ + +++ L +A+
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP---TLITYSILVKGLTRAK 344
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
++ ++ K++ G + YN+LI F+ G KA EI + M L SSTY
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I K+G+ D A +L +EM GF F S++ + DSA++ EM
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
P + +LI K GK AL LW + G+ + ++ ++GKLD A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
++ G + +Y L+ ++D A + M GL+P TY++L+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTN 534
L N V+ A + + K G DV V++ K + + M S ++ N
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ L + +SG A L E + + YTS++
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 35/200 (17%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I KAE+ E F ++ + +T YN LI + G A E+ E M+
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL---- 342
+S+TY +I ++ R++ A LF+EM+ G P + + +L+D GK G++
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 343 -------------------------------DSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
A ++ EMR G P Y I Y
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 372 VKSGKLETALRLWDEMKIAG 391
+K G + A + DE A
Sbjct: 796 LKQGGVLEAFKGSDEENYAA 815
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ L +A KL+ +F K+I GC +D +YN+LI+ K +AF + M K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
D+ TY ++I L +++ A + + + K G P + ++ ++D KA R +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ EM +P +Y LI +Y +SG+L AL L ++MK G PN A YT +I+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ +++ A F +M G P Y L++ + GQ+ L M + + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSV 516
TYTV++ A V A+++L EM+ G D +T + + Y+K+G V
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 199 FDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTET 258
FD EM+ + + G LL +I L K K + + + + G +DT T
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N+L+ G +AF I + + C++D +Y +I +LD AF EM
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
RG +P ++ L+ + +++ A++ + + G P Y +I+ K+ + E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+DEM +PN +Y +I ++ +SG+L +A+ DM+ G P +TY L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN-KKLVDVAAKILLEMKAMG- 496
+ + +++ A L+ M GL P + YT L+ ++V V +L EM +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSKNV 746
Query: 497 YSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+ +T + ++ Y ++G+V A R L M GI ++ ++ +K G
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 8/362 (2%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK---IDTETYNSLITLFLNKGLPYKAFEIY 279
CN ++ L +A E CC + D CK D + + I F G +A +++
Sbjct: 228 TCNILLTSLVRAN--EFQKCC--EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 283
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
ME+ + T+ +I L GR D AF ++M RG P L ++ LV + +A
Sbjct: 284 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 343
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A V EM G+ P +Y +LI+S++++G L A+ + D M G + Y
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I+ + K+G+ D A +M GF ++ ++ + + D A++ M
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDL 518
+ PG T L++ L A ++ + G+ VD S+ L+ + E G +D
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
A R + + G + L C + A L+ V K D Y+ ++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 579 HL 580
L
Sbjct: 584 GL 585
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 4/403 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
++ +P+ + + DGL +D + ++MV L+ + +++ L +A+
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP---TLITYSILVKGLTRAK 344
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
++ ++ K++ G + YN+LI F+ G KA EI + M L SSTY
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I K+G+ D A +L +EM GF F S++ + DSA++ EM
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
P + +LI K GK AL LW + G+ + ++ ++GKLD A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
++ G + +Y L+ ++D A + M GL+P TY++L+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTN 534
L N V+ A + + K G DV V++ K + + M S ++ N
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ L + +SG A L E + + YTS++
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 35/200 (17%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I KAE+ E F ++ + +T YN LI + G A E+ E M+
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL---- 342
+S+TY +I ++ R++ A LF+EM+ G P + + +L+D GK G++
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 343 -------------------------------DSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
A ++ EMR G P Y I Y
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 372 VKSGKLETALRLWDEMKIAG 391
+K G + A + DE A
Sbjct: 796 LKQGGVLEAFKGSDEENYAA 815
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 172/390 (44%), Gaps = 13/390 (3%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
++ P+ Y +L D L F+ + L +M+ V + N +I K
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV---ITYNALINGYCKR 406
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
+E + + ++ +T TYN LI + + +KA + M + L D TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTY 465
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
+I +SG D+A++L M RG P + S++DS+ K+ R++ A + +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G P +Y +LI+ Y K+GK++ A + ++M PN + +I GKL
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL- 473
A M K G PT ST L+ G DHA + M ++G +P TYT +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIR 532
T +L+D A ++ +M+ G S D+ T S ++ Y G + A L+ M +G
Sbjct: 646 TYCREGRLLD-AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 533 TNNF----IIRQLFESCMKSGLYESAKPLL 558
+ +I+ L E MK G + ++P L
Sbjct: 705 PSQHTFLSLIKHLLE--MKYGKQKGSEPEL 732
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 170/427 (39%), Gaps = 39/427 (9%)
Query: 151 THVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV 210
TH+ L V D + LF K + P+ Y +L L S L EM
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 211 GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
+ +I L K E + ++ + G + TYN+LI + +G
Sbjct: 351 ETGIKPNIHTYTV---LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+ A ++ E ME ++ TY +I KS + A + +M R P + +
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYN 466
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
SL+D ++G DSA ++ M G P Y S+I+S KS ++E A L+D ++
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G PN +YT +I+ + K+GK+D A M LP T+ L+ A G++ A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY 510
L M GL+P +ST T+L+ L
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRL---------------------------------- 612
Query: 511 IKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDL 570
+K+G D A + M SSG + + ++ + G A+ ++ + DL
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 571 ILYTSIL 577
Y+S++
Sbjct: 673 FTYSSLI 679
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 198/503 (39%), Gaps = 63/503 (12%)
Query: 131 WKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLF 190
W P L + + + + +HV+ + D L+ W + Y S Y L
Sbjct: 75 WHKSPSLKSMVSAI----SPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLL 130
Query: 191 DGLNRSRDFDGV----QLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L + + GV +LL + DS + +L C + + K E+ E+ +
Sbjct: 131 TLL-INNGYVGVVFKIRLLMIKSC-DSVGDALYVLDLCRK----MNKDERFELKY----- 179
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
K+ YN+L+ GL + ++Y M + + TY M+ K G
Sbjct: 180 ------KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGN 233
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A + ++ G P + SL+ + LDSA KV EM G R Y
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI + +++ A+ L+ +MK P YT++I+S S + A++ +ME+ G
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY L++ + + + A +L M GL P + TY L+ + +++ A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 487 KILLEM-------------------------KAMGYSVD----------VTASDVLMVYI 511
++ M KAMG VT + ++
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
+ G+ D A R L M G+ + + + +S KS E A L ++ +++
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 572 LYTSILAHLVRCQEEK-NERHLM 593
+YT+++ C+ K +E HLM
Sbjct: 534 MYTALIDGY--CKAGKVDEAHLM 554
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 162/407 (39%), Gaps = 23/407 (5%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P Y + D L +S+ + LFD + N V + A +I KA K++ +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA---LIDGYCKAGKVDEA 551
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
+K+ C ++ T+N+LI G +A + E M K ST ++I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K G D A+ FQ+M G +P + + + + + + GRL A + +MR G P
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES--HAKSGK------- 411
Y SLI+ Y G+ A + M+ G P+ + +I+ K GK
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 412 ---------LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT-NAG 461
D + M + P +Y L+ G + A K+++ M N G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLAL 520
+ P + LL+ K + AAK++ +M +G+ + + VL+ + K+G +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAK 567
+ + G + + + + K GL E+ L + K
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 124/313 (39%), Gaps = 24/313 (7%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ +L L + DFD F +M+ IQ + +L +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT---FIQTYCREGRLLDA 656
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
K+++ G D TY+SLI + + G AF++ + M T C T+ +I +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 301 L--AKSGR----------------LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
L K G+ D +L ++M P + L+ + + G L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 343 DSAMKV--HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
A KV HM+ R G P ++ +L+ K K A ++ D+M G+ P
Sbjct: 777 RVAEKVFDHMQ-RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++I K G+ + S F ++ + G+ + +++ G ++ +L+N M
Sbjct: 836 VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 461 GLRPGLSTYTVLL 473
G + TY++L+
Sbjct: 896 GCKFSSQTYSLLI 908
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 26/332 (7%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQAL-KVVNDGDAGLSLFRWAKR-QSWYSPSDDCYV 187
+ K L+ ++ K+ P ++ T + +++ DGD + R+ + S P Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 188 MLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEVSFCCFKK 246
R +G L ++M+ +GVS L + +I+ + +F K+
Sbjct: 642 TFIQTYCR----EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 247 IQDAGCKIDTETYNSLITLFL------NKGLPYK------------AFEIYESMEKTSCL 288
++D GC+ T+ SLI L KG + E+ E M + S
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
++ +YE +I + + G L A K+F M + G P +F +L+ K + + A K
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
V +M G+ P LI K G+ E ++ + GY + + ++I+
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
K G ++ F+ MEK G + TY+ L+E
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 170/395 (43%), Gaps = 36/395 (9%)
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
C+ V+ A+ L + F +++ G + T TYN+L+ +F G+ +A + + ME
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+ SC DS TY ++ ++G A + + M +G P + +++D+ GKAG+ D
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+K+ M+ G P Y +++ K + +++ +MK G PN A + ++
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
G F +M+ GF P T+ L+ + G A K+Y MT AG
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS-VDVTASDVLMVY------------ 510
++TY LL LA K ++ +MK+ G+ + + S +L Y
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 511 ---IKEGSVDLALRWLRFM-----------GSS---------GIRTNNFIIRQLFESCMK 547
IKEG + + LR + GS G + + I + +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 548 SGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ +Y+ A+ +LE+ DL+ Y S++ VR
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 2/291 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPY-KAFEIYESMEKT 285
++ ++ K E + F+++++ G TYN ++ +F G + K + + M
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
D T ++ A+ G L A + F E+K G+ PG + +L+ GKAG A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ V EM Y L+ +YV++G + A + + M G PN YT VI++
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+ K+GK D A+ F M++AG +P TY +L + + + +K+ M + G P
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGS 515
+T+ +L L NK + ++ EMK+ G+ D + L+ Y + GS
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 169/400 (42%), Gaps = 42/400 (10%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V N ++Q KA + K++++ C D+ TYN L+ ++ G +A + E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
M K + ++ TY +I K+G+ D A KLF MK G P + +++ +GK R
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 342 LDSAMK-----------------------------------VHMEMRGFGYRPPPTIYVS 366
+ +K V EM+ G+ P + +
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI +Y + G A +++ EM AG+ Y ++ + A+ G + SDM+ G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT-LLANKKLVDVA 485
F PT ++Y+ +L+ +A G ++ N + + P ++ +L T LLAN K +A
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP---SWMLLRTLLLANFKCRALA 613
Query: 486 A--KILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
+ K GY D V + +L ++ + D A L + G+ + L
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ ++ G A+ +L+T S K DL+ Y +++ R
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 36/392 (9%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
VI KA K + + F +++AGC +T TYN++++L K + ++ M+
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
C + +T+ M+ G ++F+EMK GF P + F +L+ + G+ G A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
K++ EM G+ T Y +L+ + + G + + +MK G++P Y+L+++ +
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY 571
Query: 407 AKSGK-----------------------------------LDIAMSAFSDMEKAGFLPTP 431
AK G L + AF+ +K G+ P
Sbjct: 572 AKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+ +L + + D A + S+ GL P L TY L+ + + A +IL
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 492 MKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
++ D V+ + V+ + + G + A+R L M GIR F G+
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 551 YESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + ++E + + + + + ++ R
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 141/344 (40%), Gaps = 37/344 (10%)
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR-LDSAM 346
LLD Y ++ +++G+ + A LF+ MK G P L + ++D GK GR +
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
V EMR G + +++ + + G L A + E+K GY P Y +++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 407 AKSGKLDIAMSAFSDME-----------------------------------KAGFLPTP 431
K+G A+S +ME K G +P
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
TY +++ + +G+ D A+KL+ SM AG P TY +L+LL K + K+L +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 492 MKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
MK+ G S + T + +L + +G R R M S G + L + + G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 551 YESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMS 594
A + + + Y ++L L R + ++ +++S
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+ I++ G D TYNSL+ +++ +G +KA EI +++EK+ D +Y +I +
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 304 SGRLDAAFKLFQEMKGRGFRPGL---NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
G + A ++ EM RG RP + N F S +MG ++ ++ M RP
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC---MAKNDCRPN 770
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
+ +++ Y ++GK A+ KI + P F
Sbjct: 771 ELTFKMVVDGYCRAGKYSEAMDFVS--KIKTFDPCF 804
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 367 LIESYVK----SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
+IE +V+ + A +L D++ + Y + YT ++ +++++GK + A+ F M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 423 EKAGFLPTPSTYACLLEMHAASGQI-DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
++ G PT TY +L++ G+ + + + M + GL+ T + +L+ A + L
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 482 VDVAAKILLEMKAMGYSV-DVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
+ A + E+K+ GY VT + +L V+ K G AL L+ M + ++ +
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L + +++G + A ++E + I YT+++
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L+ N + LA +E+ +F FKK G K D +NS++++F + +A I E
Sbjct: 602 LLLANFKCRALAGSER---AFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
S+ + D TY ++ + G A ++ + ++ +P L + +++ + G
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ A+++ EM G RP Y + + Y G + + M RPN +
Sbjct: 716 LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFK 775
Query: 401 LVIESHAKSGKLDIAMSAFSDME 423
+V++ + ++GK AM S ++
Sbjct: 776 MVVDGYCRAGKYSEAMDFVSKIK 798
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 14/231 (6%)
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH----AKSGKLDIAMS 417
T VSL++ SG E A+ L++ + ++ L VIE + + +A
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAK 196
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+ +L Y +L ++ +G+ + A+ L+ M G P L TY V+L +
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 478 N-----KKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
+K++ V L EM++ G D T S VL +EG + A + + S G
Sbjct: 257 KMGRSWRKILGV----LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L + K+G+Y A +L+ ++ D + Y ++A VR
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 163/359 (45%), Gaps = 8/359 (2%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
V+ L K+ ++ F+K+++ K Y+ +I G A ++ ME
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
D TY +I L G+ D K+ +EM GR P + F++L+D K G+L A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+++ EM G P Y SLI+ + K L A +++D M G P+ Y+++I S+
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K+ ++D M F ++ G +P TY L+ SG+++ A +L+ M + G+ P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS-VDLALRWLRF 525
TY +LL L + ++ A +I +M+ ++ + ++++ + S VD A
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 526 MGSSGIR----TNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ G++ T N +I L C K L E+ + + D I AHL
Sbjct: 516 LSDKGVKPDVVTYNVMIGGL---CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 9/367 (2%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
LV + +I L ++ + ++ + G + D TY ++ G A +++
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME+ + Y ++I +L K G D A LF EM+ +G + + ++SL+ + G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ D K+ EM G P + +LI+ +VK GKL A L++EM G P+ Y
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I+ K L A F M G P TY+ L+ + + ++D M+L+ +++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLA 519
GL P TY L+ ++ A ++ EM + G V +L+ + G ++ A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 520 LRWLRFMGSS----GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTS 575
L M S GI N II + C S + + A L + + K D++ Y
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGM---CNASKV-DDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 576 ILAHLVR 582
++ L +
Sbjct: 531 MIGGLCK 537
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 171/369 (46%), Gaps = 8/369 (2%)
Query: 140 QLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDF 199
Q D++ + P + + ++ + L LFR + ++ + Y ++ D L + F
Sbjct: 207 QPDEVTYGPVLNRLCKS----GNSALALDLFRKMEERNIKASVVQ-YSIVIDSLCKDGSF 261
Query: 200 DGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
D LF+EM + V V + +I L K + +++ D T+
Sbjct: 262 DDALSLFNEMEMKGIKADV---VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
++LI +F+ +G +A E+Y M D+ TY +I K L A ++F M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
+G P + ++ L++S KA R+D M++ E+ G P Y +L+ + +SGKL
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A L+ EM G P+ Y ++++ +G+L+ A+ F M+K+ Y ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
+ ++D A L+ S+++ G++P + TY V++ L K + A + +MK G +
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 500 DVTASDVLM 508
D ++L+
Sbjct: 559 DDFTYNILI 567
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L GL +D + EM+G + + +V + +I K KL + +
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNI---IPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
++ G DT TYNSLI F + ++A ++++ M C D TY ++I + K+
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
R+D +LF+E+ +G P + +LV ++G+L++A ++ EM G P Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
L++ +G+L AL ++++M+ + +Y ++I + K+D A S F +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P TY ++ G + A L+ M G P TY +L+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 486 AKILLEMKAMGYSVD 500
+++ EMK G+S D
Sbjct: 580 VELIEEMKVCGFSAD 594
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 1/355 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I + +KL +F + G + DT T+++L+ F +G +A + + M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
D T +I L GR+ A L M GF+P + +++ + K+G A+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ +M + Y +I+S K G + AL L++EM++ G + + Y+ +I
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
GK D +M +P T++ L+++ G++ A +LYN M G+ P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRF 525
TY L+ + + A ++ M + G D+ +L+ Y K VD +R R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 526 MGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ S G+ N L +SG +AK L + V+ ++ Y +L L
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 275 AFEIYESMEKTSCL-----------------------------------LDSSTYELMIP 299
A +++ESM ++ L D T +MI
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
+ +L AF + G+ P F++LV+ GR+ A+ + M RP
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
+LI G++ AL L D M G++P+ Y V+ KSG +A+ F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
ME+ + Y+ +++ G D A+ L+N M G++ + TY+ L+ L N
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 480 KLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFII 538
D AK+L EM D VT S ++ V++KEG + A M + GI +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 539 RQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L + K A + + V+ + D++ Y+ ++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 1/309 (0%)
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
L+ + +++ K G + A K+F E+ R +P + F +L++ K G LD ++
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+M RP Y +LI + K K++ A L+DEM G PN ++T +I H++
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
+G++D+ ++ M G P Y L+ +G + A + + M GLRP T
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMG 527
YT L+ V+ A +I EM G +D V S ++ KEG V A R LR M
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 528 SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
+GI+ ++ + ++ K G ++ LL+ + ++ Y +L L + + K
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 588 NERHLMSIL 596
N L+ +
Sbjct: 538 NADMLLDAM 546
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 4/348 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F +I + ++N+LI + G + F + MEK+ D TY +I L K
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
++D A LF EM RG P IF +L+ + G +D + + +M G +P +
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y +L+ + K+G L A + D M G RP+ YT +I+ + G ++ A+ +M+
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ G ++ L+ G++ A + M AG++P TYT+++ K
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 484 VAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
K+L EM++ G+ V +VL+ + K G + A L M + G+ ++ L
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNER 590
E + S + + + + A DL Y SI+ L R ++ R
Sbjct: 563 EGHHRHA-NSSKRYIQKPEIGIVA--DLASYKSIVNELDRASKDHRNR 607
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 159/356 (44%), Gaps = 1/356 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
C ++ + K + + +I DAG ++ +N L+ F +G A ++++ +
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
K S ++ +I K G LD F+L +M+ RP + +++L++++ K ++
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D A + EM G P I+ +LI + ++G+++ + +M G +P+ LY +
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ K+G L A + M + G P TY L++ G ++ A+++ M G+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV-DVTASDVLMVYIKEGSVDLALR 521
++ L+ + + V A + L EM G DVT + ++ + K+G +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L+ M S G + L K G ++A LL+ +N D I Y ++L
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 3/323 (0%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
+ +L + + + Q +FDE+ S V V+ N +I K L+ F
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTV---VSFNTLINGYCKVGNLDEGFRLKH 299
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+++ + + D TY++LI + A +++ M K + + + +I +++G
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+D + +Q+M +G +P + ++ +LV+ K G L +A + M G RP Y
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+LI+ + + G +ETAL + EM G + ++ ++ K G++ A A +M +A
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P TY +++ G KL M + G P + TY VLL L + A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 486 AKILLEMKAMGYSVDVTASDVLM 508
+L M +G D + L+
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLL 562
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 11/319 (3%)
Query: 160 VNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSG 217
V + D G L + +S P Y L + L + DG LFDEM G N
Sbjct: 288 VGNLDEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND- 345
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
V +I ++ ++++ ++K+ G + D YN+L+ F G A
Sbjct: 346 ----VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
I + M + D TY +I + G ++ A ++ +EM G F++LV M
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
K GR+ A + EM G +P Y +++++ K G +T +L EM+ G+ P+
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y +++ K G++ A M G +P TY LLE H ++ K Y
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA---NSSKRYIQK 578
Query: 458 TNAGLRPGLSTYTVLLTLL 476
G+ L++Y ++ L
Sbjct: 579 PEIGIVADLASYKSIVNEL 597
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 19/307 (6%)
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
IP+ + RL + ++G G +L+D M K + +ME+ G+
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCG---------NLLDRMMKLNPTGTIWGFYMEILDAGF 236
Query: 358 RPPPTIYV--SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
P +YV L+ + K G + A +++DE+ +P + +I + K G LD
Sbjct: 237 --PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
MEK+ P TY+ L+ ++D A L++ M GL P +T L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
+ +D+ + +M + G D+ + L+ + K G + A + M G+R +
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK---NERH 591
L + + G E+A + + + ++D + +++++ + C+E + ER
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM--CKEGRVIDAERA 472
Query: 592 LMSILGA 598
L +L A
Sbjct: 473 LREMLRA 479
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 26/394 (6%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ K++ LE S F ++ + G K D T+ ++I+ G+P +A E +E M
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
C D+ T MI ++G +D A L+ + +R F++L+ G +G D
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ ++ EM+ G +P IY LI+S ++ + A ++ ++ G+ PN++ Y ++
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLR 463
++ ++ D A++ + +M++ G T Y LL M A + +D A +++ M N
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRW 522
P T++ L+T+ A V A LL+M+ G+ + + V+ Y K VD +R
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKS---------GLYESAKPLLETYVNSAAKVDLILY 573
+ GI ++ L ++ G E AKP L V
Sbjct: 479 FDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVK---------- 528
Query: 574 TSILAHLVRCQE---EKNERHLMSILGATKHKAH 604
+L C+E +K L+ +G+ KA+
Sbjct: 529 --MLVEEQNCEEGVFKKEASELIDSIGSDVKKAY 560
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 155/361 (42%), Gaps = 1/361 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N +++ L + KL+ + ++ C D TY LI A ++ +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M C D TY +++ + K GRLD A K +M G +P + ++ SM G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
R A K+ +M G+ P + LI + G L A+ + ++M G +PN Y
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++ K K+D A+ M G P TY +L G+++ A+++ N +++
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLA 519
G P L TY ++ LA A K+L EM+A D +T S ++ +EG VD A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+++ GIR N + KS + A L +N K + YT ++
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 580 L 580
L
Sbjct: 564 L 564
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 1/323 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+++D GC D TYN L+ +G +A + M + C + T+ +++ ++
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+GR A KL +M +GF P + F L++ + + G L A+ + +M G +P
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y L+ + K K++ A+ + M G P+ Y ++ + K GK++ A+ + +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
G P TY +++ A +G+ A+KL + M L+P TY+ L+ L+ + VD
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 484 VAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
A K E + MG + VT + +++ K D A+ +L FM + G + N L
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 543 ESCMKSGLYESAKPLLETYVNSA 565
E G+ + A LL N
Sbjct: 562 EGLAYEGMAKEALELLNELCNKG 584
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 178/398 (44%), Gaps = 10/398 (2%)
Query: 192 GLN-RSRDFDGVQLLFDEMVGD----SANSGVSLL-VACNRVIQYLAKAEKLEVSFCCFK 245
GLN R++ F+ + + G+ S NS +L V N ++ + + +LE F +
Sbjct: 67 GLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLE 126
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G D +LI F G KA +I E +E + + D TY +MI K+G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
++ A + M P + + +++ S+ +G+L AM+V M P Y
Sbjct: 187 EINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
LIE+ + + A++L DEM+ G P+ Y +++ K G+LD A+ +DM +
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P T+ +L ++G+ A KL M G P + T+ +L+ L K L+ A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 486 AKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
IL +M G + ++ + +L + KE +D A+ +L M S G + + +
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
K G E A +L + LI Y +++ L +
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 206/490 (42%), Gaps = 64/490 (13%)
Query: 52 IPGLSNDTNFMRCYCNNGSGSKEFTEEIEYLDESGSVIYKGKGVRSVEPGLDDHVMVGDV 111
+P + T +R +C G +++ + +E L+ SG+V D + +
Sbjct: 134 VPDIIPCTTLIRGFCRLGK-TRKAAKILEILEGSGAV--------------PDVITYNVM 178
Query: 112 KKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFR 171
+ A + + V+ R P++ T L+ + + + QA++V++ R
Sbjct: 179 ISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD---------R 229
Query: 172 WAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYL 231
+R + P Y +L + R L DEM V V N ++ +
Sbjct: 230 MLQRDCY--PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV---VTYNVLVNGI 284
Query: 232 AKAEKLEVSFCCFKKIQDAGCK-------------------IDTE--------------- 257
K +L+ + + +GC+ +D E
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 258 -TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
T+N LI KGL +A +I E M + C +S +Y ++ K ++D A + +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
M RG P + + +++ ++ K G+++ A+++ ++ G P Y ++I+ K+GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
A++L DEM+ +P+ Y+ ++ ++ GK+D A+ F + E+ G P T+
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
++ S Q D A+ M N G +P ++YT+L+ LA + + A ++L E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 497 YSVDVTASDV 506
+A V
Sbjct: 585 LMKKSSAEQV 594
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 151/339 (44%), Gaps = 3/339 (0%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D TYN+++ + G +A E+ + M + C D TY ++I + + A KL
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
EM+ RG P + + LV+ + K GRLD A+K +M G +P + ++ S +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G+ A +L +M G+ P+ + ++I + G L A+ M + G P +Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
LL ++D A++ M + G P + TY +LT L V+ A +IL ++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 495 MGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
G S V +T + V+ K G A++ L M + ++ + L + G +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 554 AKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL 592
A + + + + + SI+ L C+ + +R +
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGL--CKSRQTDRAI 539
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 24/302 (7%)
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+ ++G L+ FK + M G P + +L+ + G+ A K+ + G G P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y +I Y K+G++ AL + D M ++ P+ Y ++ S SGKL AM
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M + P TY L+E + HAMKL + M + G P + TY VL+ + +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRW----------LRFMGSSG 530
+D A K L +M + G +V ++++ S+ RW LR S
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILR-----SMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNER 590
+ T N +I L C K GL A +LE + + + Y +L C+E+K +R
Sbjct: 344 VVTFNILINFL---CRK-GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF--CKEKKMDR 397
Query: 591 HL 592
+
Sbjct: 398 AI 399
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 191/422 (45%), Gaps = 14/422 (3%)
Query: 171 RWAKRQSWYS--------PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
+W K +S ++ P+ Y +L + ++F+ + D M + V
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV---F 185
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+ + VI LAKA KL+ + F ++ + G D YN LI FL + A E+++ +
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 283 -EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
E +S + T+ +MI L+K GR+D K+++ MK L ++SL+ + AG
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
+D A V E+ Y +++ + + GK++ +L LW M+ N Y +
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I+ ++GK+D A + M G+ +TY + +G ++ A+ + + ++G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLAL 520
+ Y ++ L KK ++ A+ ++ EM G ++ + L+ I++ + A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+LR MG +G R L K+G + A ++ + + K DL Y+ +L L
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 581 VR 582
R
Sbjct: 545 CR 546
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 204/467 (43%), Gaps = 11/467 (2%)
Query: 152 HVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVG 211
HV + LK + A +LF A R Y+ S Y + L+ +R + V + + +
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 212 DSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDA-GCKIDTETYNSLITLFLNKG 270
+ ++ VI+ K + + FK++++ GC+ +YN+L+ F+
Sbjct: 72 QECKCDEDVALS---VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
K ++ E + TY ++I K + A M GF+P + ++
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE-MKI 389
++++ + KAG+LD A+++ EM G P T Y LI+ ++K +TA+ LWD ++
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 390 AGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDH 449
+ PN + ++I +K G++D + + M++ TY+ L+ +G +D
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 450 AMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV 509
A ++N + + TY +L + + ++ M+ SV++ + ++L+
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIK 367
Query: 510 -YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
++ G +D A R M + G + +G A +++ +S +
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 569 DLILYTSILAHLVRCQEEKNERHLMSILGATKH--KAHSFMCGLFTG 613
D+ Y SI+ L C++++ E + +KH + +S +C G
Sbjct: 428 DVYAYASIIDCL--CKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++++ +G +D Y S+I K +A + + M K L+S +I L +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
RL A +EM G RP + + L+ + KAG+ A EM G++P Y
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
L+ + K++ AL LW + +G + ++ ++I GKLD AM+ ++ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
TY L+E G + A ++ M GL+P + +Y ++ L + V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 485 AAKILLEMKAMGYSVDVTASDVLM 508
A + + + G V ++L+
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 113/253 (44%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L K ++LE + K++ G ++++ N+LI + +A M K
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
C +Y ++I L K+G+ A +EM G++P L ++ L+ + + ++D A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
++ + G ++ LI GKL+ A+ + M+ N Y ++E
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K G + A + M K G P +Y +++ + +AM+ ++ N G+ P +
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674
Query: 467 STYTVLLTLLANK 479
T+ +L+ + N+
Sbjct: 675 YTWNILVRAVVNR 687
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 169/374 (45%), Gaps = 19/374 (5%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L +GL S LL D+MV G N+ V V+ + K+ + ++ +K
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNA-----VTYGPVLNVMCKSGQTALAMELLRK 253
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+++ K+D Y+ +I G AF ++ ME + TY ++I +GR
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
D KL ++M R P + F+ L+DS K G+L A ++H EM G P Y S
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ + K L+ A ++ D M G PN + ++I + K+ ++D + F M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
+ TY L++ G+++ A +L+ M + + P + TY +LL L + + A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 487 KILLEMKAMGYSVDVTASDVLMVYIKEGS-VDLALRWLRFMG------SSGIRTNNFIIR 539
+I +++ +D+ ++++ + S VD A W F G++T N +I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA--WDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 540 QLFESCMKSGLYES 553
L C K L E+
Sbjct: 552 GL---CKKGPLSEA 562
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 136/316 (43%), Gaps = 7/316 (2%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEK 236
Y P+ + L +GL L D MV G + L+ N ++ L + K
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD-----LITINTLVNGLCLSGK 208
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ K+ + GC+ + TY ++ + G A E+ ME+ + LD+ Y +
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I L K G LD AF LF EM+ +G + + L+ AGR D K+ +M
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + LI+S+VK GKL A L EM G P+ YT +I+ K LD A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
M G P T+ L+ + + +ID ++L+ M+ G+ TY L+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 477 ANKKLVDVAAKILLEM 492
++VA ++ EM
Sbjct: 449 CELGKLNVAKELFQEM 464
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 190/434 (43%), Gaps = 13/434 (2%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSAN-SGVS 219
D + LFR S P+ + LF + +++ +D V L +M G + N +S
Sbjct: 69 ADDAIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 220 LLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY 279
+++ C + KL ++F KI G + +T T+++LI +G +A E+
Sbjct: 128 IMINC------FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
+ M + D T ++ L SG+ A L +M G +P + +++ M K+
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G+ AM++ +M + Y +I+ K G L+ A L++EM++ G N Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
++I +G+ D DM K P T++ L++ G++ A +L+ M +
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDL 518
G+ P TYT L+ + +D A +++ M + G ++ ++L+ Y K +D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
L R M G+ + L + + G AK L + V+ +++ Y +L
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 579 HLVRCQEEKNERHL 592
L C ++E+ L
Sbjct: 482 GL--CDNGESEKAL 493
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 160/359 (44%), Gaps = 4/359 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y ++ DGL + D LF+EM + + + N +I A + + +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI---ITYNILIGGFCNAGRWDDGAKLLR 322
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ + T++ LI F+ +G +A E+++ M D+ TY +I K
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
LD A ++ M +G P + F L++ KA R+D +++ +M G Y
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+LI+ + + GKL A L+ EM PN Y ++++ +G+ + A+ F +EK+
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
Y ++ + ++D A L+ S+ G++PG+ TY +++ L K + A
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 486 AKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
+ +M+ G++ D ++L+ ++ +G +++ + + G + I+ + +
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 9/344 (2%)
Query: 238 EVSFCC---FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
E+SFCC F D + L+ + + A +++ M + L +
Sbjct: 37 ELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADD-----AIDLFRDMIHSRPLPTVIDF 91
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
+ +AK+ + D L ++M+ +G L + +++ + +L A ++
Sbjct: 92 SRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK 151
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
GY P + +LI G++ AL L D M G++P+ ++ SGK
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
AM M + G P TY +L + SGQ AM+L M ++ Y++++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRT 533
L +D A + EM+ G + ++ ++L+ + G D + LR M I
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
N L +S +K G A+ L + ++ D I YTS++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 4/357 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ PS + L +G R +FD+MVG V V N +I L K+++++
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV---VIYNTIIDGLCKSKQVD 203
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ +++ G D TYNSLI+ + G A + M K D T+ +I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
K GR+ A + ++EM R P + ++ L+ + RLD A ++ M G
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y LI Y KS K+E ++L+ EM G N YT++I+ + ++GKL++A
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
F M G P TY LL +G+I+ A+ + M G+ + TY +++ +
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 479 KKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
V A I + G D+ T + +++ K+G A R M GI N
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 3/325 (0%)
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
++E M+ + T +++ + +L A +M G P + F SL++
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
+ R+ A+ + +M G GY+P IY ++I+ KS +++ AL L + M+ G P+
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y +I SG+ A S M K P T+ L++ G++ A + Y M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSV 516
L P + TY++L+ L +D A ++ M + G DV +L+ Y K V
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
+ ++ M G+ N L + ++G A+ + V ++I Y +
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 577 LAHLVRCQEEKNERHLMSILGATKH 601
L L C K E+ L+ + K+
Sbjct: 403 LHGL--CDNGKIEKALVILADMQKN 425
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 10/354 (2%)
Query: 209 MVGDSANSGVS-LLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFL 267
MV D N G++ + N V++ + +E + F ++ G D+ +Y ++
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 268 NKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN 327
G +A M + + D++T L++ L ++G ++ A F++M GF+P L
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
F SL+D + K G + A ++ EM G++P + +LI+ K G E A RL+ ++
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 388 -KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
+ Y+PN YT +I + K KL+ A FS M++ G P +TY L+ H +G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASD 505
A +L N M + G P + TY + L K A ++L + + G D VT +
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 506 VLMVYIKEGSVDLALRWLRFMGSSG----IRTNNFIIRQLFESCMKSGLYESAK 555
++ K+ ++ AL + M +G +R NN +I C + + ES +
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF---CRQKKMKESER 519
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 146/370 (39%), Gaps = 49/370 (13%)
Query: 243 CFK--KIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
CF+ KIQ+A G D T ++T GL +A + M +
Sbjct: 227 CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPN 286
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
+ +I L K G + AF++ +EM G++P + +L+D + K G + A ++ +
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL 346
Query: 351 EM-RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
++ R Y+P Y S+I Y K KL A L+ MK G PN YT +I H K+
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA 406
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G A + M GF+P TY ++ + A +L N + GL TY
Sbjct: 407 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 466
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM--------------------- 508
T+L+ + ++ A M G+ D+ +++L+
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 509 ---------------VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
Y KEG +DLAL++ M G ++F L K + +
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 586
Query: 554 AKPLLETYVN 563
A L E ++
Sbjct: 587 ACKLYEAMID 596
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 6/366 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ P+ + L DGL + + +EMV + V A +I L K E
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA---LIDGLCKRGWTE 339
Query: 239 VSFCCFKK-IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+F F K ++ K + TY S+I + + +A ++ M++ + +TY +
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I K+G A++L M GF P + + + +DS+ K R A ++ + G
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
Y LI+ K + AL + M G+ + L ++I + + K+ +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
F + G +PT TY ++ + G ID A+K +++M G P TY L++ L
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 478 NKKLVDVAAKILLEMKAMGYS-VDVTASDVLMVYIKEGSVDLALRWLRFMGSS-GIRTNN 535
K +VD A K+ M G S +VT + Y K A+ L + IRT
Sbjct: 580 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVR 639
Query: 536 FIIRQL 541
++R+L
Sbjct: 640 TLVRKL 645
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 2/288 (0%)
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
M+ N ++ GRL+ A + +M+ +G P +++ + G ++ A V EM G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + Y ++ + GK++ A R M G+ P+ A TL++ + ++G ++ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F M GF P + L++ G I A ++ M G +P + T+T L+ L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 477 ANKKLVDVAAKILLEM-KAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
+ + A ++ L++ ++ Y +V T + ++ Y KE ++ A M G+ N
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L K+G + A L+ + ++ Y + + L +
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 2/209 (0%)
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+ ++ + + GRL+ A+ + M+M+ G P ++E V+ G +E A ++DEM
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
+ G P+ + Y L++ + GK+ A + M + GF+P +T +L +G +
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDV 506
+ A+ + M + G +P L +T L+ L K + A ++L EM G+ +V T + +
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 507 LMVYIKEGSVDLALR-WLRFMGSSGIRTN 534
+ K G + A R +L+ + S + N
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 141/381 (37%), Gaps = 29/381 (7%)
Query: 109 GDVKKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLS 168
G +K+ F +++E + R W P + T T + L +
Sbjct: 301 GSIKQAF-------EMLEEMVRNGWKPNVYTH----------TALIDGLCKRGWTEKAFR 343
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVI 228
LF R Y P+ Y + G + + ++LF M V+ +I
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT---LI 400
Query: 229 QYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT-SC 287
KA ++ + D G + TYN+ I K +A E YE + K SC
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS---RAPEAYELLNKAFSC 457
Query: 288 LL--DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
L D TY ++I K ++ A F M GF + + L+ + + ++ +
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
++ + G P Y S+I Y K G ++ AL+ + MK G P+ Y +I
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
K +D A + M G P T L + +AM L + +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KLW 634
Query: 466 LSTYTVLLTLLANKKLVDVAA 486
+ T L+ L ++K V VAA
Sbjct: 635 IRTVRTLVRKLCSEKKVGVAA 655
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 145/333 (43%), Gaps = 1/333 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ D TY ++I +G P A + MEK D Y +I +L K +D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF EM +G RP + ++SL+ + GR A ++ +M P + SLI++
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+ K GKL A +L+DEM PN Y +I +LD A F+ M LP
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L+ + ++ M+L+ M+ GL TYT L+ D A +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M + G ++ + L+ + K G ++ A+ ++ S + + + + E K+G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E L + K D+I Y ++++ +
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 3/293 (1%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L D + + LFDEM+ S + + V N +I ++L+ + F +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNI---VTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
C D TYN+LI F E++ M + + ++ TY +I ++ D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A +F++M G P + + +L+D + K G+L+ AM V ++ P Y +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
E K+GK+E L+ + + G +P+ Y +I K G + A + F M++ G L
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
P TY L+ H G + +L M + STY ++ +L + +L
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 3/308 (0%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E ME + TY +MI L + +L A + +M G+ P + SL++
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GY+P + +L+ + K A+ L + M + G +P+ Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
VI K G+ D+A++ + MEK Y+ +++ +D A+ L+ M N
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G+RP + TY+ L++ L N A+++L +M + + VT + ++ + KEG +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I N L CM L E A+ + V+ D++ Y +++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE-AQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 578 AHLVRCQE 585
+ ++
Sbjct: 388 NGFCKAKK 395
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 169/377 (44%), Gaps = 18/377 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGV---SLLVACNRVIQYLAKAEKLEVSFC 242
Y + D L + R D LF EM V S L++C + A +L +S
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL-LSDM 301
Query: 243 CFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLA 302
+KI + T+NSLI F +G +A ++++ M + S + TY +I
Sbjct: 302 LERKINP-----NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
RLD A ++F M + P + + +L++ KA ++ M++ +M G
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
Y +LI + ++ + A ++ +M G PN Y +++ K+GKL+ AM F +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
+K+ P TY + E +G+++ L+ S++ G++P + Y +++ K L
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 483 DVAAKILLEMKAMGYSVDV-TASDVLMVYIKEG----SVDL--ALRWLRFMGSSGIRTNN 535
+ A + ++MK G D T + ++ ++++G S +L +R RF G + T
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS--TYG 594
Query: 536 FIIRQLFESCMKSGLYE 552
+ L + + G E
Sbjct: 595 LVTDMLHDGRLDKGFLE 611
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 164/387 (42%), Gaps = 8/387 (2%)
Query: 208 EMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFL 267
E++G S N L N +I L + +L + K+ G T NSL+ F
Sbjct: 92 EILGVSHN-----LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 268 NKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN 327
+ +A + + M + D+ T+ ++ L + + A L + M +G +P L
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+ ++++ + K G D A+ + +M IY ++I+S K ++ AL L+ EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
G RP+ Y+ +I G+ A SDM + P T+ L++ A G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVL 507
A KL++ M + P + TY L+ +D A +I M + DV + L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 508 MV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAA 566
+ + K V + R M G+ N L ++ ++A+ + + V+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 567 KVDLILYTSILAHLVRCQEEKNERHLM 593
+++ Y ++L L C+ K E+ ++
Sbjct: 447 HPNIMTYNTLLDGL--CKNGKLEKAMV 471
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 132/319 (41%), Gaps = 6/319 (1%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N+L+ L L++ A +++ M K+ + ++ +AK + D ++M+
Sbjct: 39 NALLHLKLDE-----AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
G L + +++ + + +L A+ + +M GY P SL+ + ++
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A+ L D+M GY+P+ +T ++ + K A++ M G P TY ++
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
G+ D A+ L N M + + Y+ ++ L + VD A + EM G
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 500 DV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
DV T S ++ G A R L M I N L ++ K G A+ L
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 559 ETYVNSAAKVDLILYTSIL 577
+ + + +++ Y S++
Sbjct: 334 DEMIQRSIDPNIVTYNSLI 352
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 341 RLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
+LD A+ + EM RP P+I + L+ + K K + + ++M+I G N
Sbjct: 45 KLDEAVDLFGEM--VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y ++I + +L A++ M K G+ P+ T LL +I A+ L + M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVD 517
G +P T+T L+ L A ++ M G D VT V+ K G D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
LAL L M I + I + +S K + A L N + D+ Y+S++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 578 AHL 580
+ L
Sbjct: 283 SCL 285
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 182/395 (46%), Gaps = 22/395 (5%)
Query: 195 RSRDFDGVQLLFDEMVGDSANSG--------VSLLVACN---RVIQY--LAKAEKLEVSF 241
RS+DF + ++ M+G + G ++ L++ N VI Y L +A LE
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 242 CCFKKIQDA----GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
K+ D G K D TYN++I +G+ +AFE+ ++E C D +Y ++
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L G+ + KL +M P + ++ L+ ++ + G+++ AM + M+ G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P Y LI ++ + G+L+ A+ + M G P+ Y V+ + K+GK D A+
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
F + + G P S+Y + +SG A+ + M + G+ P TY +++ L
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 478 NKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
+ +VD A ++L++M++ + VT + VL+ + K ++ A+ L M +G R N
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
L E +G A L N ++D I
Sbjct: 545 TYTVLIEGIGFAGYRAEAMEL----ANDLVRIDAI 575
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 3/267 (1%)
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
F + +P KA + E +EK D Y +I K R+D A ++ M+ + F P
Sbjct: 134 FFTLRNIP-KAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP 191
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
+ ++ S+ G+LD A+KV ++ +P Y LIE+ + G ++ AL+L
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
DEM G +P+ Y +I K G +D A ++E G P +Y LL
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS 504
G+ + KL M + P + TY++L+T L ++ A +L MK G + D +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 505 DVLM-VYIKEGSVDLALRWLRFMGSSG 530
D L+ + +EG +D+A+ +L M S G
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 1/329 (0%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D YN+LI F A + + M D+ TY +MI +L G+LD A K+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
++ +P + + L+++ G +D A+K+ EM G +P Y ++I K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G ++ A + +++ G P+ Y +++ + GK + + M P TY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+ L+ G+I+ AM L M GL P +Y L+ + +DVA + L M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 495 MGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
G D V + VL K G D AL +G G N+ +F + SG
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 554 AKPLLETYVNSAAKVDLILYTSILAHLVR 582
A ++ +++ D I Y S+++ L R
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 152/338 (44%), Gaps = 3/338 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A N +I K +++ + +++ DT TYN +I ++G A ++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+C TY ++I G +D A KL EM RG +P + + +++ M K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D A ++ + G P Y L+ + + GK E +L +M PN Y+++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I + + GK++ AM+ M++ G P +Y L+ G++D A++ +M + G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 463 RPGLSTY-TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLAL 520
P + Y TVL TL N K D A +I ++ +G S + ++ + + + G AL
Sbjct: 400 LPDIVNYNTVLATLCKNGK-ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ M S+GI + + + G+ + A LL
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
+ G+R T + + +SG +L L + M GY P+ L T +I+ +
Sbjct: 83 QSLGFRD--TQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI 140
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
A+ +EK G P Y L+ +ID A ++ + M + P TY ++
Sbjct: 141 PKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
+ L ++ +D+A K+L ++ + V +L+ + EG VD AL+ + M S G+
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
+ + F + K G+ + A ++ + D+I Y +L L+
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ L K E + + GC+ D TYN+LI F KA E+++ ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 285 TS-CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
S C D TY MI K+G++ A L +M G P F LVD KAG +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+A ++ +M FG P + SLI+ Y + G++ RLW+EM G PN Y+++I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ +L A + +P P Y +++ +G+++ A + M +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEG 514
P T+T+L+ K + A I +M A+G S D +T S +L +K G
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 189/441 (42%), Gaps = 32/441 (7%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
S F+ R S+++ Y +L L ++ D +F+ M D + NR
Sbjct: 92 FSRFKLNIRHSFWT-----YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN-------NR 139
Query: 227 VIQYLAK--AEKLEVSFCC---FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
++ +L AEK ++ F + + GC + NSL+ + A ++++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM---VVNSLLNTLVKLDRVEDAMKLFDE 196
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+ D+ T+ ++I L G+ + A +L M G G P + + +L+ K+
Sbjct: 197 HLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 342 LDSAMKVHMEMR-GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L+ A ++ +++ G P Y S+I Y K+GK+ A L D+M G P +
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++++ +AK+G++ A M G P T+ L++ + GQ+ +L+ M
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-----SDVLMVYIKEGS 515
G+ P TY++L+ L N+ + A ++L ++ S D+ + V+ + K G
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLA----SKDIIPQPFMYNPVIDGFCKAGK 432
Query: 516 VDLALRWLRFMGSSGIRTNNFIIRQL-FESCMKSGLYESAKPLLETYVNSAAKVDLILYT 574
V+ A + M + + L CMK ++E A + V D I +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVS 491
Query: 575 SILAHLVRCQEEKNERHLMSI 595
S+L+ L++ K HL I
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQI 512
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 8/297 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L G +S + + +F ++ S S +V +I KA K+ +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCS--PDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G T+N L+ + G A EI M C D T+ +I + G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
++ F+L++EM RG P ++ L++++ RL A ++ ++ P P +Y
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+I+ + K+GK+ A + +EM+ +P+ +T++I H G++ A+S F M
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV-LLTLLANKKL 481
G P T + LL +G A L N R G S V L T AN L
Sbjct: 482 GCSPDKITVSSLLSCLLKAGMAKEAYHL-----NQIARKGQSNNVVPLETKTANATL 533
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ L K E + + GC+ D TYN+LI F KA E+++ ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 285 TS-CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
S C D TY MI K+G++ A L +M G P F LVD KAG +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+A ++ +M FG P + SLI+ Y + G++ RLW+EM G PN Y+++I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ +L A + +P P Y +++ +G+++ A + M +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEG 514
P T+T+L+ K + A I +M A+G S D +T S +L +K G
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 189/441 (42%), Gaps = 32/441 (7%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
S F+ R S+++ Y +L L ++ D +F+ M D + NR
Sbjct: 92 FSRFKLNIRHSFWT-----YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN-------NR 139
Query: 227 VIQYLAK--AEKLEVSFCC---FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
++ +L AEK ++ F + + GC + NSL+ + A ++++
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM---VVNSLLNTLVKLDRVEDAMKLFDE 196
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+ D+ T+ ++I L G+ + A +L M G G P + + +L+ K+
Sbjct: 197 HLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 342 LDSAMKVHMEMR-GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L+ A ++ +++ G P Y S+I Y K+GK+ A L D+M G P +
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++++ +AK+G++ A M G P T+ L++ + GQ+ +L+ M
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-----SDVLMVYIKEGS 515
G+ P TY++L+ L N+ + A ++L ++ S D+ + V+ + K G
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLA----SKDIIPQPFMYNPVIDGFCKAGK 432
Query: 516 VDLALRWLRFMGSSGIRTNNFIIRQL-FESCMKSGLYESAKPLLETYVNSAAKVDLILYT 574
V+ A + M + + L CMK ++E A + V D I +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKITVS 491
Query: 575 SILAHLVRCQEEKNERHLMSI 595
S+L+ L++ K HL I
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQI 512
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 8/297 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L G +S + + +F ++ S S +V +I KA K+ +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCS--PDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G T+N L+ + G A EI M C D T+ +I + G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
++ F+L++EM RG P ++ L++++ RL A ++ ++ P P +Y
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+I+ + K+GK+ A + +EM+ +P+ +T++I H G++ A+S F M
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV-LLTLLANKKL 481
G P T + LL +G A L N R G S V L T AN L
Sbjct: 482 GCSPDKITVSSLLSCLLKAGMAKEAYHL-----NQIARKGQSNNVVPLETKTANATL 533
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 180/391 (46%), Gaps = 24/391 (6%)
Query: 130 RWKWGPELDTQLDKLQFV-PNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVM 188
R WGP + ++L+KL+ V P++ V + LK+ ND F WA +Q Y Y
Sbjct: 106 RNHWGPSVVSELNKLRRVTPSI--VAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNA 163
Query: 189 LFDGLNRSRDF---DGVQLLFDEMVGDSANSGVSLLV---ACNRVIQYLAKAEKLEVSFC 242
LNR+ F D + L D + +L+ A NR L V +
Sbjct: 164 FAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNR--------RGLRVYYV 215
Query: 243 CFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLA 302
++K++ G K YN ++ + G A +YE ++ + +S+T+ +++ L
Sbjct: 216 -YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
K+GR++ ++ Q M+ +P + + +++ ++ G LD++++V EMR +P
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
Y +L+ K G++E L+ EMK + +Y ++IE GK+ A + + D+
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT-VLLTLLANKKL 481
+G++ Y +++ + Q+D A KL+ L P T + +++ + +L
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRL 454
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLMVYIK 512
D + +L + +GY V SD L + K
Sbjct: 455 SDF-SNVLERIGELGYPV----SDYLTQFFK 480
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 165/429 (38%), Gaps = 82/429 (19%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
R++ P Y + L + D ++DEM D V +A ++ L K
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV---MAYGTLVVGLCKD 346
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
++E + F +++ ID E Y LI F+ G A ++E + + + D Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG----------------LNIFASLVDSMGK 338
+I L ++D A+KLFQ P L+ F+++++ +G+
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 339 AG-----------------RLDSAMKVH----MEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G +AM + ++ +G G ++Y L+E+ K G +
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHG---SVSVYNILMEALYKMGDI 523
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ +L L+ EM+ G+ P+ + Y++ I + G + A S + + +P+ + Y L
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Query: 438 LEMHAASGQID------------------------------------HAMKLYNSMTNAG 461
+ G+ID MK+ + M G
Sbjct: 584 TKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEG 643
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEM---KAMGYSVDVTASDVLMVYIKEGSVDL 518
+ Y +++ ++ + VA ++ E+ K M + V ++L+ K+ + DL
Sbjct: 644 VFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADL 703
Query: 519 ALRWLRFMG 527
L ++F G
Sbjct: 704 VLSGIKFFG 712
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L+ N ++ L K+ + ++ + G + + TY ++ + G A E+
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME+ + LD+ Y ++I L K G LD AF LF EM+ +GF+ + + +L+ AG
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
R D K+ +M P + LI+S+VK GKL A +L EM G PN Y
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I+ K +L+ A+ M G P T+ L+ + + +ID ++L+ M+
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
G+ TY L+ ++VA K+ EM + D+ + +L+
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 4/324 (1%)
Query: 194 NRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK 253
N R DG +LL D M+ + V V + +I K KL + K++ G
Sbjct: 310 NAGRWDDGAKLLRD-MIKRKISPNV---VTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
+T TYNSLI F + +A ++ + M C D T+ ++I K+ R+D +L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
F+EM RG + +LV ++G+L+ A K+ EM RP Y L++
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
+G+LE AL ++ +++ + + +Y ++I + K+D A F + G
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
Y ++ + A L+ MT G P TY +L+ AA+++ EMK
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 494 AMGYSVDVTASDVLMVYIKEGSVD 517
+ G+ DV+ +++ + G +D
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELD 629
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 148/321 (46%), Gaps = 1/321 (0%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T N+L+ G A + + M +T + TY ++ + KSG+ A +L ++M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ R + ++ ++D + K G LD+A + EM G++ Y +LI + +G+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ +L +M PN ++++I+S K GKL A +M + G P TY L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
++ +++ A+++ + M + G P + T+ +L+ +D ++ EM G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 498 SVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKP 556
+ VT + ++ + + G +++A + + M S +R + + L + +G E A
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 557 LLETYVNSAAKVDLILYTSIL 577
+ S ++D+ +Y I+
Sbjct: 495 IFGKIEKSKMELDIGIYMIII 515
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 171/424 (40%), Gaps = 41/424 (9%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLN-KGLPYKAFEIYESME 283
NR+ +AK ++ E+ K+++ G T + +I F + L Y AF +
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSY-AFSTMGKIM 150
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
K D+ + ++ L R+ A +L M G +P L +LV+ + G++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+ + M G++P Y ++ KSG+ A+ L +M+ + + Y+++I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ K G LD A + F++ME GF TY L+ +G+ D KL M +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS------------------------- 498
P + T++VL+ + + A ++L EM G +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 499 VDVTAS-----DVLMV------YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMK 547
VD+ S D++ Y K +D L R M G+ N L + +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 548 SGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSFM 607
SG E AK L + V+ + D++ Y +L L C + E+ L I G +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL--CDNGELEKAL-EIFGKIEKSKMELD 507
Query: 608 CGLF 611
G++
Sbjct: 508 IGIY 511
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A +++ M ++ L + + +AK+ + + L ++M+ +G + + +++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ +L A ++ GY P I+ +L+ ++ AL L D M G++P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
++ +GK+ A+ M + GF P TY +L + SGQ AM+L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKE 513
M ++ Y++++ L +D A + EM+ G+ D+ + L+ +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G D + LR M I N L +S +K G A LL+ + + I Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 574 TSILAHLVRCQEEKNERHLMSI 595
S++ C+E + E + +
Sbjct: 372 NSLIDGF--CKENRLEEAIQMV 391
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 11/342 (3%)
Query: 219 SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI 278
+LL AC+R L+ + F+ ++ C+ D TYN++I+++ GL +A +
Sbjct: 302 TLLSACSR-------DSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 279 YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
+ +E D+ TY ++ A+ + +++Q+M+ GF + +++ GK
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTI-YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
G+LD A++++ +M+G R P I Y LI+S K+ + A L EM G +P
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y+ +I +AK+GK + A FS M ++G P Y+ +L++ + A LY M
Sbjct: 475 TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVD 517
+ G P + Y +++ L + D K + +M+ + + S VL +K D
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL---VKGECFD 591
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
LA R L+ ++G N + + S SG + A LLE
Sbjct: 592 LAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/582 (20%), Positives = 242/582 (41%), Gaps = 47/582 (8%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I+ K + + + ++ +G D +T+NSL++ + G +A I+ +M +
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+ +++ L GRL+ + + +E++ GF+ + ++D+ +AG +
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
K++ M+ GY P +Y +IE K ++ A + EM+ A ++ A++ +++ +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+ + +++ G P +TY L+ M+ + + L M N GL P L
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDLALRWLRF 525
TY L++ +K ++ A ++ E+ + G +D + +M ++ GS A + L+
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 526 MGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
M ++GI + L S SG + A+ +L ++ ++ + Y+S++ +R ++
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 586 --------------------------------EKNERHLMSILGATKHKAHSFMCGLFTG 613
K + +M +L A + L G
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAG 1177
Query: 614 PEHRGQPVLSFVREFFQGVDYELEEGAAKYFXXXXXXXXXXMGQINRARCVWKVAYENKL 673
R + ++S V +F+ + +E+ AA F A V+++ + +
Sbjct: 1178 ---RPELLVSEVDGWFEKLK-SIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKRGI 1233
Query: 674 FPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLY-YGIVPRRIKLVTGP--- 729
F + W D R LS GAAL+A+ L + L Y P+ + L+TG
Sbjct: 1234 FSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEY 1293
Query: 730 ---TLKIVIAQMLSSVESPFEVSKV---VLRASGDSVMEWFK 765
+L + L + SPF K +L A S+ W K
Sbjct: 1294 NGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWLK 1335
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 175/381 (45%), Gaps = 27/381 (7%)
Query: 111 VKKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPN--------MTHVTQALKVVND 162
VKK MN +A+ K + +R K+ + L QFV + MT V +
Sbjct: 109 VKK--MNKVALIKAKDWRERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVVKSV 166
Query: 163 GDA----GLSLFRWAKRQSWYSPSDDCYVMLFDGLNR-SRDFDGVQLLF--DEMVGDSAN 215
G L +F W + W+SP+ + L R +++ V++ + VGD
Sbjct: 167 GQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ 226
Query: 216 SGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG--LPY 273
+++ +R ++ +KA++L ++ GC D ++N+LI L G P
Sbjct: 227 VYNAMMGVYSRSGKF-SKAQEL------VDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 274 KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
A E+ + + + D+ TY ++ ++ LD A K+F++M+ +P L + +++
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
G+ G A ++ ME+ G+ P Y SL+ ++ + E ++ +M+ G+
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEK-AGFLPTPSTYACLLEMHAASGQIDHAMK 452
+ Y +I + K G+LD+A+ + DM+ +G P TY L++ + + A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 453 LYNSMTNAGLRPGLSTYTVLL 473
L + M + G++P L TY+ L+
Sbjct: 460 LMSEMLDVGIKPTLQTYSALI 480
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 153/361 (42%), Gaps = 12/361 (3%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L+ C ++ A+A ++ F ++ +GC+ S++ ++ G P A ++
Sbjct: 687 LLHCCVANEHYAEASQV------FSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVN 740
Query: 281 SME-KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E K S Y +I K A + ++ G P L + SL+ + +
Sbjct: 741 QAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVS--LIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
G + A + M G P PT+ L+ + G+LE + +E++ G++ + +
Sbjct: 801 GCYERARAIFNTMMRDG--PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS 858
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
L++++ A++G + +S M+ AG+LPT Y ++E+ ++ A + + M
Sbjct: 859 SILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSV 516
A + L+ + +L + + ++ +K G D T + L++ Y ++
Sbjct: 919 EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRP 978
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
+ ++ M + G+ + L + K E A+ L E ++ K+D Y ++
Sbjct: 979 EEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTM 1038
Query: 577 L 577
+
Sbjct: 1039 M 1039
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 169/386 (43%), Gaps = 3/386 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
AC+ + L + + + D D YN+ I+ A+E+YE+M
Sbjct: 240 ACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM 299
Query: 283 EKTSCLLDSSTYELMIPNLAKSGR-LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+K + D+ T ++I L K+GR +++F++M +G + ++F LV S G
Sbjct: 300 DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
+ A+ + EM G R +Y +L+++Y KS +E L+ EM+ G +P+ A Y +
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI-DHAMKLYNSMTNA 460
+++++A+ + DI + +ME G P +Y CL+ + + ++ D A + M
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLA 519
GL+P +YT L+ + + A EM G V T + VL + + G
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+ + M I+ L + K GLY A+ ++ + + ++ Y ++
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 580 LVRCQEEKNERHLMSILGATKHKAHS 605
R ++ L+ + A K S
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDS 625
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 7/256 (2%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
+ N ++ K+ +E F +++D G K TYN L+ + + P +
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRL-DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME + +Y +I ++ ++ D A F MK G +P + + +L+ + +G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM---KIAGYRPNFA 397
+ A EM G +P Y S+++++ +SG + +W M KI G R
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR---I 556
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y +++ AK G A S+ K G P+ TY L+ +A GQ +L M
Sbjct: 557 TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 458 TNAGLRPGLSTYTVLL 473
L+P TY+ ++
Sbjct: 617 AALNLKPDSITYSTMI 632
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 10/267 (3%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
R PS Y +L D R D V+ L EM V +I +
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC---LISAYGRT 462
Query: 235 EKL-EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
+K+ +++ F +++ G K + +Y +LI + G KA+ +E M K T
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 294 YELMIPNLAKSG---RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
Y ++ +SG +L +KL K +G R N +L+D K G A V
Sbjct: 523 YTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN---TLLDGFAKQGLYIEARDVVS 579
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
E G +P Y L+ +Y + G+ +L EM +P+ Y+ +I + +
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVR 639
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACL 437
A M K+G +P P +Y L
Sbjct: 640 DFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 164/359 (45%), Gaps = 1/359 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ L K+ + ++ + GC+ D TYNS++ G A ++ ME+
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ D TY +I +L + G +DAA LF+EM+ +G + + + SLV + KAG+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ +M P + L++ +VK GKL+ A L+ EM G PN Y +++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ +L A + M + P T+ L++ + ++D MK++ +++ GL
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWL 523
TY++L+ + +A ++ EM + G DV +L+ + G ++ AL
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ S + + + E K G E A L + K +++ YT +++ L +
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 181/420 (43%), Gaps = 5/420 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
D ++LF+ R S PS + F + R++ F+ L+ D N +
Sbjct: 70 DDAIALFQEMIR-SRPLPSLVDFSRFFSAIARTKQFN---LVLDFCKQLELNGIAHNIYT 125
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
N +I + K ++ K+ G + DT T+N+LI +G +A + + M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+ C D TY ++ + +SG A L ++M+ R + + +++++DS+ + G +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+A+ + EM G + Y SL+ K+GK L +M PN + +++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ K GKL A + +M G P TY L++ + ++ A + + M
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRW 522
P + T+T L+ K VD K+ + G + VT S ++ + + G + LA
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ M S G+ + L + +G E A + E S + +++YT+I+ + +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 171/404 (42%), Gaps = 5/404 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
Y P + L GL +L D MV + V V N ++ + ++
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV---VTYNSIVNGICRSGDTS 210
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
++ +K+++ K D TY+++I G A +++ ME TY ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
L K+G+ + L ++M R P + F L+D K G+L A +++ EM G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y +L++ Y +L A + D M P+ +T +I+ + ++D M
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
F ++ K G + TY+ L++ SG+I A +L+ M + G+ P + TY +LL L +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFI 537
++ A +I +++ + + + ++ K G V+ A + G++ N
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 538 IRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ C K L E+ L + + A D T I AHL
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 18/406 (4%)
Query: 151 THVTQALKVVNDG--DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDE 208
T+ T + DG DA +SLF+ + + S S Y L GL ++ ++ LL +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKS-SVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 209 MVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLN 268
MV + V ++ N ++ K KL+ + +K++ G + TYN+L+ +
Sbjct: 289 MV---SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
+ +A + + M + C D T+ +I R+D K+F+ + RG
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
++ LV ++G++ A ++ EM G P Y L++ +GKLE AL ++++++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+ +YT +IE K GK++ A + F + G P TY ++ G +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
A L M G P TY L+ + +AK++ EMK+ G+S D ++ +++
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 509 VYIKEGSVDLALRW------------LRFMGSSGIRTNNFIIRQLF 542
+ L LR+ L GS IR ++ ++F
Sbjct: 586 DMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMF 631
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 8/407 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAKAEK 236
Y P+ L +G S+ L D+M G N+ V N +I L K
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT-----VTFNTLIHGLFLHNK 201
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ ++ GC+ D TY ++ +G AF + ME+ Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I L K +D A LF+EM+ +G RP + ++SL+ + GR A ++ +M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + +LI+++VK GKL A +L+DEM P+ Y+ +I +LD A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F M P TY L++ +++ M+++ M+ GL TY +L+ L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNN 535
D+A +I EM + G ++ + L+ + K G ++ A+ ++ S +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + E K+G E L K D++ Y ++++ R
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 170/375 (45%), Gaps = 4/375 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y ++ +GL + D D L ++M GV + N +I L K + ++ + FK
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY---NTIIDGLCKYKHMDDALNLFK 280
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+++ G + + TY+SLI+ N G A + M + D T+ +I K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+L A KL+ EM R P + ++SL++ RLD A ++ M P Y
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+LI+ + K ++E + ++ EM G N Y ++I+ ++G D+A F +M
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P TY LL+ +G+++ AM ++ + + + P + TY +++ + V+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 486 AKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
+ + G DV A + ++ + ++GS + A + M G N+ L +
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 545 CMKSGLYESAKPLLE 559
++ G E++ L++
Sbjct: 581 RLRDGDREASAELIK 595
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TY+SLI F +A +++E M C D TY +I K R++ ++F+EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
RG + L+ + +AG D A ++ EM G P Y +L++ K+GKL
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
E A+ +++ ++ + P Y ++IE K+GK++ F ++ G P Y +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ G + A L+ M G P Y L+ + +A+++ EM++ G+
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 498 SVDVTASDVLMVYIKEGSVD 517
+ D + ++ + +G +D
Sbjct: 603 AGDASTIGLVTNMLHDGRLD 622
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 158/368 (42%), Gaps = 3/368 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I + +L ++ K+ G + + T +SL+ + + +A + + M T
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
++ T+ +I L + A L M +G +P L + +V+ + K G D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ +M P IY ++I+ K ++ AL L+ EM+ G RPN Y+ +I
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
G+ A SDM + P T++ L++ G++ A KLY+ M + P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRF 525
TY+ L+ +D A ++ M + DV + L+ + K V+ + R
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 526 MGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
M G+ N L + ++G + A+ + + V+ +++ Y ++L L C+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL--CKN 479
Query: 586 EKNERHLM 593
K E+ ++
Sbjct: 480 GKLEKAMV 487
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 1/282 (0%)
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
++ +AK + D L ++M+ G ++ L++ + +L A+ V +M G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
Y P SL+ Y S ++ A+ L D+M + GY+PN + +I K AM
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ M G P TY ++ G D A L N M L PG+ Y ++ L
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 477 ANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
K +D A + EM+ G + VT S ++ G A R L M I +
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
F L ++ +K G A+ L + V + ++ Y+S++
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 3/279 (1%)
Query: 306 RLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
+LD A LF EM K R F P + F+ L+ ++ K + D + + +M+ G Y
Sbjct: 61 KLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
LI + + +L AL + +M GY PN + ++ + S ++ A++ M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
G+ P T+ L+ + AM L + M G +P L TY V++ L + D+
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 485 AAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
A +L +M+ V + ++ + K +D AL + M + GIR N L
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 544 SCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
G + A LL + D+ +++++ V+
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 195/456 (42%), Gaps = 32/456 (7%)
Query: 160 VNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR------DFDGV----------Q 203
V+DG +S +R R +D V LF + RSR DF +
Sbjct: 31 VSDGKGKVS-YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD 89
Query: 204 LLFD-----EMVGDSAN-SGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
L+ D E+ G + N +S+++ C + KL ++F KI G + DT
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINC------CCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T+++LI +G +A E+ + M + T ++ L +G++ A L M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
GF+P + ++ M K+G+ AM++ +M + Y +I+ K G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A L++EM+I G++ + +YT +I +G+ D DM K P ++ L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
++ G++ A +L+ M G+ P TYT L+ + +D A +L M + G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 498 SVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKP 556
++ ++L+ Y K +D L R M G+ + L + + G E AK
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 557 LLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL 592
L + V+ + D++ Y +L L C + E+ L
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGL--CDNGEPEKAL 477
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 7/322 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L +GL + LL D MV G N V V++ + K+ + ++ +K
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNE-----VTYGPVLKVMCKSGQTALAMELLRK 237
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+++ K+D Y+ +I G AF ++ ME D Y +I +GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
D KL ++M R P + F++L+D K G+L A ++H EM G P Y S
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ + K +L+ A + D M G PN + ++I + K+ +D + F M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
+ TY L++ G+++ A +L+ M + +RP + +Y +LL L + + A
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 487 KILLEMKAMGYSVDVTASDVLM 508
+I +++ +D+ ++++
Sbjct: 478 EIFEKIEKSKMELDIGIYNIII 499
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 4/315 (1%)
Query: 200 DGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
DG +LL D M+ V VA + +I K KL + K++ G DT TY
Sbjct: 300 DGAKLLRD-MIKRKITPDV---VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
SLI F + KA + + M C + T+ ++I K+ +D +LF++M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
RG + +L+ + G+L+ A ++ EM RP Y L++ +G+ E
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
AL ++++++ + + +Y ++I + K+D A F + G P TY ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
G + A L+ M G P TY +L+ + +AK++ E+K G+SV
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 500 DVTASDVLMVYIKEG 514
D + +++ + +G
Sbjct: 596 DASTVKMVVDMLSDG 610
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC + T+N LI + L E++ M + D+ TY +I + G+L+ A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+LFQEM R RP + + L+D + G + A+++ ++ IY +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+ K++ A L+ + + G +P+ Y ++I K G L A F ME+ G P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
TY L+ H G + KL + G ST +++ +L++ +L
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 124/297 (41%), Gaps = 1/297 (0%)
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+A++ + D L ++M+ +G L + +++ + +L A ++ GY P
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ +LI G++ AL L D M G++P ++ +GK+ A+
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M + GF P TY +L++ SGQ AM+L M ++ Y++++ L
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+D A + EM+ G+ D+ L+ + G D + LR M I +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
L + +K G A+ L + + D + YTS++ + + H++ ++
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 193/455 (42%), Gaps = 19/455 (4%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV-GDSANSGVSLLV 222
D L +F ++ + P D Y ML + L S D + FD++ G SGVS
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS--- 218
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A V+ L ++ + + + + G ++ + N ++ KGL E+ +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-----KGLSVDQIEVASRL 273
Query: 283 EKTSCLLDSS------TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
S +LD T+ +I K G +D AF LF+ M+ RG P L +++L+D
Sbjct: 274 --LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
KAG L K+ + G + ++ S I+ YVKSG L TA ++ M G PN
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
YT++I+ + G++ A + + K G P+ TY+ L++ G + LY
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGS 515
M G P + Y VL+ L+ + L+ A + ++M ++V + L+ + +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 516 VDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTS 575
D AL+ R MG GI+ + + + G E A L + D + Y +
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 576 ILAHLVRCQEEKNERHLMSILGATKHKAHSFMCGL 610
++ + + L ++ K A +C +
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 189/468 (40%), Gaps = 45/468 (9%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LV 222
D LF+ Q P Y L DG ++ G+ + ++ + + GV L +V
Sbjct: 303 DRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKA----GMLGMGHKLFSQALHKGVKLDVV 357
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+ I K+ L + +K++ G + TY LI G Y+AF +Y +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
K TY +I K G L + F L+++M G+ P + I+ LVD + K G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
AM+ ++M G R ++ SLI+ + + + + AL+++ M I G +P+ A +T V
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE-----MHAASG------------ 445
+ G+L+ A+ F M K G P Y L++ M G
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 446 ------------------QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
+I+ A K +N++ + P + TY ++ + + +D A +
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 488 ILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
I +K + + VT + ++ V K +D A+R M G + N L +
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 547 KSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV---RCQEEKNERH 591
KS E + L E ++ Y+ I+ L R E N H
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 9/385 (2%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
Y P Y +L DGL++ +M+G S V V N +I + + +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV---VVFNSLIDGWCRLNRFD 513
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ F+ + G K D T+ +++ + + +G +A ++ M K D+ Y +I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
K + +LF M+ + + ++ + K R++ A K +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y ++I Y +L+ A R+++ +K+ + PN T++I K+ +D A+
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
FS M + G P TY CL++ + S I+ + KL+ M G+ P + +Y++++ L
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFI 537
+ VD A I + DV A +L+ Y K G + A M +G++ ++ +
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 538 IRQLFES-----CMKSGLYESAKPL 557
R L E M G++ KP+
Sbjct: 814 QRALSEYNPPKWLMSKGVWVHDKPM 838
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 185/481 (38%), Gaps = 71/481 (14%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANS 216
L + ++ ++ L FRWA+ S D + + L R+ FD +FDEM+ +
Sbjct: 77 LSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKD 132
Query: 217 GVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
F I+D +D + L+ G+ KA
Sbjct: 133 ------------------------FNVLGSIRDR--SLDADVCKFLMECCCRYGMVDKAL 166
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP-GLNIFASLVDS 335
EI+ + ++ + M+ +L S R+D F ++ G P G++ ++D+
Sbjct: 167 EIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDA 226
Query: 336 MGKAGRLDSAMKVHMEMRGFGYR--------------------------------PPPTI 363
+ G + A+ H + G+R P P +
Sbjct: 227 LFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 364 --YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
+ +LI + K G+++ A L+ M+ G P+ Y+ +I+ + K+G L + FS
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
G ++ ++++ SG + A +Y M G+ P + TYT+L+ L
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 482 VDVAAKILLEM--KAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+ A + ++ + M S+ VT S ++ + K G++ M G + I
Sbjct: 407 IYEAFGMYGQILKRGMEPSI-VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL---AHLVRCQEEKNERHLMSIL 596
L + K GL A + + +++++++ S++ L R E LM I
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 597 G 597
G
Sbjct: 526 G 526
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 1/333 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ D TY +++ +G A + + MEK D Y +I L ++ A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF EM +G RP + + SL+ + GR A ++ +M P + +LI++
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GKL A +L+DEM P+ Y+ +I +LD A F M P
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L++ + +++ M+L+ M+ GL TY L+ L D+A KI
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M + G D+ +L+ + K G ++ AL ++ S + + + + E K+G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E L + K ++I+YT++++ R
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDC-YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVS-L 220
GD L+L K + +D Y + D L ++ + LF EM N G+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM----DNKGIRPN 289
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N +I+ L + + + + + T+++LI F+ +G +A ++Y+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K S D TY +I RLD A +F+ M + P + + +L+ KA
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
R++ M++ EM G Y +LI+ ++G + A +++ +M G P+ Y+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++++ K GKL+ A+ F ++K+ P TY ++E +G+++ L+ S++
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
G++P + YT +++ K L + A + EMK G
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 13/354 (3%)
Query: 241 FCCFKKIQDAGCKID----------TETYNSLI-TLFLNKGLPYKAFEIYESMEKTSCLL 289
+C K+I +A +D T T+N+LI LFL+ +A + + M C
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS-EAVALIDRMVARGCQP 218
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY ++ L K G +D A L ++M+ + I+ +++D++ ++ A+ +
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
EM G RP Y SLI G+ A RL +M PN ++ +I++ K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GKL A + +M K P TY+ L+ ++D A ++ M + P + TY
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGS 528
L+ K V+ ++ EM G + VT + ++ + G D+A + + M S
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
G+ + L + K G E A + E S + D+ Y ++ + +
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 159/374 (42%), Gaps = 3/374 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L + N +I + +L ++ K+ G + D T +SL+ + + +A + +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M ++ T+ +I L + A L M RG +P L + ++V+ + K G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+D A+ + +M IY ++I++ + AL L+ EM G RPN Y
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I G+ A SDM + P T++ L++ G++ A KLY+ M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKIL-LEMKAMGYSVDVTASDVLMVYIKEGSVDLA 519
+ P + TY+ L+ +D A + L + + VT + ++ + K V+
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+ R M G+ N L + ++G + A+ + + V+ D+I Y+ +L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 580 LVRCQEEKNERHLM 593
L C+ K E+ L+
Sbjct: 475 L--CKYGKLEKALV 486
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 3/307 (0%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M+ D +Y ++I + +L A + +M G+ P + +SL++
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M Y+P + +LI K A+ L D M G +P+ Y
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
V+ K G +D+A+S MEK Y +++ ++ A+ L+ M N
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G+RP + TY L+ L N A+++L +M + + VT S ++ ++KEG +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I + F L CM L E AK + E ++ +++ Y +++
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-AKHMFELMISKDCFPNVVTYNTLI 402
Query: 578 AHLVRCQ 584
+ +
Sbjct: 403 KGFCKAK 409
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 1/323 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A +++ M ++ L + ++ +AK + D L + M+ L + L++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ +L A+ V +M GY P SL+ Y ++ A+ L D+M + Y+P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
N + +I K A++ M G P TY ++ G ID A+ L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
M + + YT ++ L N K V+ A + EM G + VT + ++
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G A R L M I N L ++ +K G A+ L + + + D+ Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 574 TSILAHLVRCQEEKNERHLMSIL 596
+S++ +H+ ++
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELM 386
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 1/333 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ D TY +++ +G A + + MEK D Y +I L K +D A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF EM +G RP + ++SL+ + GR A ++ +M P + +LI++
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GKL A +L+DEM P+ Y+ +I +LD A F M P
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY+ L++ + +++ M+L+ M+ GL TYT L+ + D A +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M ++G ++ ++L+ + K G + A+ ++ S + + + + E K+G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E L ++I Y ++++ R
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D TY+SLI F +A ++E M C + TY +I K+ R++ +LF
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+EM RG + +L+ +A D+A V +M G P Y L++ K+
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
GKL A+ +++ ++ + P+ Y ++IE K+GK++ F ++ G P Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
++ G + A L M G P TY L+ + +A+++ EM++
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 495 MGYSVDVTASDVLMVYIKEGSVD 517
G++ D + ++ + +G +D
Sbjct: 602 CGFAGDASTIGLVTNMLHDGRLD 624
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 36/318 (11%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M+ D TY + I + +L A + +M G+ P + +SL++ +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GY+P + +LI K A+ L D+M G +P+ Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
V+ K G +D+A+S MEK Y +++ +D A+ L+ M N
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDL 518
G+RP + TY+ L++ L N A+++L +M + +V T S ++ ++KEG
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---- 342
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+L E A+ L + + + D+ Y+S++
Sbjct: 343 ---------------------KLVE----------AEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 579 HLVRCQEEKNERHLMSIL 596
+H+ ++
Sbjct: 372 GFCMHDRLDEAKHMFELM 389
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 341 RLDSAMKVHMEMRGFG----YRPPPTI--YVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
RL +KV + FG RP P+I + L+ + K K E + L ++M+ G
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ Y++ I + +L +A++ + M K G+ P T + LL + S +I A+ L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
+ M G +P T+T L+ L A ++ +M G D VT V+ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G +DLAL L+ M I + I + + K + A L N + D+ Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 574 TSILAHL 580
+S+++ L
Sbjct: 297 SSLISCL 303
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 6/364 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V ++V+ +AK++ ++ F ++ G D +YN +I A +
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K D T +I + R+ A L +M+ GFRP + I+ +++D K G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
++ A+++ M G R Y SL+ SG+ A RL +M + PN +T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
VI+ K GK AM + +M + P TY L+ G++D A ++ + M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLA 519
G P + TY L+ K VD K+ EM G D +T + ++ Y + G D A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 520 LRWLRFMGSS-GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
M S IRT + + L+ CM + E A L E S ++D+ Y ++
Sbjct: 369 QEIFSRMDSRPNIRTYSIL---LYGLCMNWRV-EKALVLFENMQKSEIELDITTYNIVIH 424
Query: 579 HLVR 582
+ +
Sbjct: 425 GMCK 428
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 120/239 (50%), Gaps = 3/239 (1%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T+ ++I +F+ +G +A ++YE M + D TY +I L GR+D A ++ M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+G P + + +L++ K+ R+D K+ EM G Y ++I+ Y ++G+
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A ++ M RPN Y++++ + +++ A+ F +M+K+ +TY +
Sbjct: 366 DAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+ G ++ A L+ S++ GL+P + +YT +++ K+ D + + +M+ G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 32/290 (11%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
K+++ G + D YN++I GL A E+++ ME+ D+ TY ++ L SG
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
R A +L ++M R P + F +++D K G+ AMK++ EM P Y
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
SLI G+++ A ++ D M G P+ Y +I KS ++D F +M +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 426 GFL--------------------------------PTPSTYACLLEMHAASGQIDHAMKL 453
G + P TY+ LL + +++ A+ L
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
+ +M + + ++TY +++ + V+ A + + G DV +
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 5/277 (1%)
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV--HMEMRGFGYRPPP 361
S L+ LF +M P + F+ ++ + K+ D + + HME+ G G+
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y +I + + AL + +M GY P+ + +I + ++ A+ S
Sbjct: 107 --YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
ME+ GF P Y +++ G ++ A++L++ M G+R TY L+ L
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 482 VDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
AA+++ +M +V T + V+ V++KEG A++ M + + F
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
L G + AK +L+ V D++ Y +++
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC D TYN+LI F + +++ M + + D+ TY +I ++GR DAA
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
++F M R P + ++ L+ + R++ A+ + M+ T Y +I
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP 429
K G +E A L+ + G +P+ YT +I + + D + + M++ G LP
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 39/265 (14%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQALKV-VNDG--DAGLSLFRWAKRQSWYSPSDDCY 186
RW L + VPN+ T + V V +G + L+ R+ P Y
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTY 282
Query: 187 VMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L +GL D + + D MV V V N +I K+++++ F++
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV---VTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY--------------------------- 279
+ G DT TYN++I + G P A EI+
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 280 -----ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
E+M+K+ LD +TY ++I + K G ++ A+ LF+ + +G +P + + +++
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRP 359
+ + D + ++ +M+ G P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 11/338 (3%)
Query: 259 YNSLIT-LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
YN++I L N+ L A E++ MEK D+ TY +I L+ SGR A +L ++M
Sbjct: 187 YNTVINGLCKNRDLN-NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
R P + F +L+D+ K G L A ++ EM P Y SLI + G L
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
A ++D M G P+ Y +I KS +++ M F +M G + TY L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ + +G+++ A K++N M + G+ P + TY +LL L N ++ A ++ +++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 498 SVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKP 556
VD+ ++++ + + + A R + G++ + + + GL A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 557 LL-----ETYVNSAAKVDLIL---YTSILAHLVRCQEE 586
L + ++ S D L YTS+ A L++ E
Sbjct: 486 LCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAHE 523
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 164/390 (42%), Gaps = 4/390 (1%)
Query: 199 FDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTET 258
FD LF EM+ + + +V RV+ +AK K ++ + K+++ G D +
Sbjct: 60 FDDAFSLFCEML---QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
+ LI F A + M K T ++ + R A L M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
G GF P + I+ ++++ + K L++A++V M G R Y +LI SG+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A RL +M PN +T +I++ K G L A + + +M + +P TY L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
G + A +++ M + G P + TY L+T K V+ K+ EM G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 499 VDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
D T + ++ Y + G +++A + M G+ + L + +G E A +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 558 LETYVNSAAKVDLILYTSILAHLVRCQEEK 587
+E S VD+I Y I+ L R + K
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 121/285 (42%), Gaps = 3/285 (1%)
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ D AF LF EM P + F ++ + K + D + ++ +M G +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
LI + + +L AL L +M G+RP+ ++ + + A+S M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
GF+P Y ++ + +++A++++ M G+R TY L++ L+N A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 486 AKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
A++L +M +V L+ ++KEG++ A + M + N F L
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
G AK + + V+ D++ Y +++ C+ ++ E
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF--CKSKRVE 341
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEM-----VGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
Y L G +S+ + LF EM VGD+ N +I +A KL V+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY--------NTLIHGYCQAGKLNVA 378
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++ D G D TYN L+ N G KA + E ++K+ +D TY ++I
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L ++ +L A+ LF+ + +G +P + +++ + + G A K+ M+ G+ P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 361 PTIYVSLIESYVKS 374
IY + + S
Sbjct: 499 ERIYDETLRDHYTS 512
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 116/283 (40%), Gaps = 7/283 (2%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQALKV-VNDGD--AGLSLFRWAKRQSWYSPSDDCY 186
RW L + K + PN+ T + V +G+ +L++ R+S P+ Y
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS-VVPNVFTY 292
Query: 187 VMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L +G + +FD MV V V N +I K++++E F +
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV---VTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ G D TYN+LI + G A +++ M D TY +++ L +G+
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A + ++++ + + ++ + + +L A + + G +P Y++
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+I + G A +L MK G+ P+ +Y + H S
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 177/385 (45%), Gaps = 14/385 (3%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
++ACN ++ L K+ +L + + ++ D G +D + L+ N+G ++ E
Sbjct: 170 VIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE 229
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
C+ + Y +I K G ++ A+ +F+E+K +GF P L F ++++ K G
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEG 289
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG-KLETALRL-WDEMKIAGYRPNFAL 398
++ ++ E++ G R ++I++ + G K++ A + W + +P+ A
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW--IIANDCKPDVAT 347
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y ++I K GK ++A+ + K G +P +YA L++ + S + D A KL M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVD 517
G +P + TY +L+ L +D A + +++ G S D ++LM + K G
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A M I + ++ L + ++SG ++ A+ + V KVD++ + +++
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 578 AHLVR---------CQEEKNERHLM 593
R C NE HL+
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLV 552
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 179/450 (39%), Gaps = 11/450 (2%)
Query: 138 DTQLDKLQFVPNMTHVTQALKVVNDG--DAGLSLF--RWAKRQSWYSPSDDCYVMLFDGL 193
D D+ V N + + N+G + G L RW K P+ Y + G
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK---GCIPNIVFYNTIIGGY 250
Query: 194 NRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK 253
+ D + L+F E+ + L +I K S ++++ G +
Sbjct: 251 CKLGDIENAYLVFKEL---KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
+ N++I G E + C D +TY ++I L K G+ + A
Sbjct: 308 VSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGF 367
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
E +G P +A L+ + K+ D A K+ ++M G +P Y LI V
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
SG ++ A+ + ++ G P+ A+Y +++ K+G+ A FS+M LP
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
YA L++ SG D A K+++ G++ + + ++ ++D A + M
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 494 AMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
D T S ++ Y+K+ + A++ R+M + + N L G ++
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 553 SAKPLLETYVNSAAKVDLILYTSILAHLVR 582
A+ + +++ YT+++ L +
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 20/282 (7%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEV 239
P Y L DG RS DFD + +F S GV + +V N +I+ ++ L+
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSL----SVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ C ++ + D TY+++I ++ + A +I+ MEK C + TY +I
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK-AGRLDSAMKVHMEMRGFGYR 358
G A + F+EM+ R P + + +L+ S+ K + L+ A+ M
Sbjct: 599 GFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658
Query: 359 PPPTIYVSLIESYVK--SGKL----------ETAL--RLWDEMKIAGYRPNFALYTLVIE 404
P + L++ +VK SGK+ +++L + MK G+ + A Y +
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
G + A M K GF P P ++A +L G
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 166/386 (43%), Gaps = 10/386 (2%)
Query: 161 NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL 220
N G A LS R W + +L +GL+ S F+ LF MV + +
Sbjct: 17 NSGKA-LSFSRLLDLSFWVRAFCNYREILRNGLH-SLQFNEALDLFTHMV---ESRPLPS 71
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
++ +++ +AK +K +V +Q G D T N L+ F PY A
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K D T+ +I R++ A + +M G +P + ++ +++DS+ K G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
++ A+ + +M +G RP +Y SL+ SG+ A L M +P+ +
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I++ K GK A +++M + P TY L+ G +D A +++ M
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLA 519
G P + YT L+ K VD A KI EM G + + +T + ++ + + G ++A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 520 LRWLRFMGSSG----IRTNNFIIRQL 541
M S G IRT N ++ L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 166/377 (44%), Gaps = 5/377 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V +I ++E + ++ + G K D Y ++I G A +++
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME D Y ++ L SGR A L + M R +P + F +L+D+ K G
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ A +++ EM P Y SLI + G ++ A +++ M+ G P+ YT
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I K K+D AM F +M + G TY L++ G+ + A ++++ M +
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM---GYSVDVTASDVLMVYI-KEGSV 516
G+ P + TY VLL L V A I +M+ G + ++ +VL+ + G +
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
+ AL M + + + K+G ++A L + + K +++ YT++
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Query: 577 LAHLVRCQEEKNERHLM 593
++ L R + K+E H++
Sbjct: 502 ISGLFR-EGLKHEAHVL 517
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TY SLI F +G +A +++ ME C D Y +I K ++D A K+F EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+G + +L+ G+ G+ + A +V M G P Y L+ +GK+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 378 ETALRLWDEMK---IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
+ AL ++++M+ + G PN Y +++ +GKL+ A+ F DM K TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+++ +G++ +A+ L+ S+ + G++P + TYT +++ L + L A + +MK
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 495 MGYS 498
G S
Sbjct: 524 DGVS 527
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 3/222 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F ++ GC D Y SLI F A +I+ M + ++ TY +I +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF---GYRPP 360
G+ + A ++F M RG P + + L+ + G++ A+ + +M+ G P
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y L+ +GKLE AL ++++M+ YT++I+ K+GK+ A++ F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ G P TY ++ G A L+ M G+
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 20/282 (7%)
Query: 122 AKIVEVVKRWKW--GPELDTQLDKLQFVPNM---THVTQALKVVNDGDAGLSLFRWAKRQ 176
A I VK K+ EL ++ ++ PN+ T + + D +F + +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKA 234
+ P Y L +G + + D +F EM G + N+ + +IQ +
Sbjct: 312 GCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT-----ITYTTLIQGFGQV 365
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS-- 292
K V+ F + G + TYN L+ G KA I+E M+K +D
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE--MDGVAP 423
Query: 293 ---TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
TY +++ L +G+L+ A +F++M+ R G+ + ++ M KAG++ +A+ +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
+ G +P Y ++I + G A L+ +MK G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 3/336 (0%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
+ L+ + Q + P + L +GL ++ + D M+ + + V
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV---YT 332
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
N VI L K +++ + ++ C +T TYN+LI+ + +A E+ +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
L D T+ +I L + A +LF+EM+ +G P + L+DS+ G+LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+ + +M G Y +LI+ + K+ K A ++DEM++ G N Y +I
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ KS +++ A M G P TY LL G I A + +MT+ G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
P + TY L++ L V+VA+K+L ++ G ++
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 5/323 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ L KA ++ + + G D TYNS+I+ G +A E+ + M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
C ++ TY +I L K +++ A +L + + +G P + F SL+ +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
AM++ EMR G P Y LI+S GKL+ AL + +M+++G + Y +I+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
K+ K A F +ME G TY L++ S +++ A +L + M G +P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWL 523
TY LLT + AA I+ M + G D+ L+ + K G V++A + L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 524 RFMGSSGIRTN----NFIIRQLF 542
R + GI N +I+ LF
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLF 621
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 185/497 (37%), Gaps = 70/497 (14%)
Query: 156 ALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN 215
+L+ D A L LF A ++ +SP Y + L RS FD ++ + ++M
Sbjct: 56 SLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCE 115
Query: 216 SGVSLLVAC---------------------------------NRVIQYLAKAEKLEVSFC 242
G S + NR++ L L++
Sbjct: 116 MGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 243 CFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLA 302
K+ G K D T+N LI A + E M + D T+ ++
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 303 KSGRLDAAFKLFQEM---------------------KGR---------------GFRPGL 326
+ G LD A ++ ++M +GR GF P
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 327 NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
F +LV+ + KAG + A+++ M GY P Y S+I K G+++ A+ + D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
M PN Y +I + K +++ A + G LP T+ L++ +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDV 506
AM+L+ M + G P TY +L+ L +K +D A +L +M+ G + V +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 507 LMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
L+ + K A M G+ N+ L + KS E A L++ +
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 566 AKVDLILYTSILAHLVR 582
K D Y S+L H R
Sbjct: 536 QKPDKYTYNSLLTHFCR 552
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 175/405 (43%), Gaps = 7/405 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN-SGVSLLVACNRVIQYLAKAEKLEV 239
P + + + G D DG + ++MV + S VS+ N ++ K ++E
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV----NVIVHGFCKEGRVED 277
Query: 240 SFCCFKKIQDA-GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ +++ + G D T+N+L+ G A EI + M + D TY +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
L K G + A ++ +M R P + +L+ ++ K +++ A ++ + G
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P + SLI+ + A+ L++EM+ G P+ Y ++I+S GKLD A++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
ME +G + TY L++ + + A ++++ M G+ TY L+ L
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 479 KKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFI 537
+ V+ AA+++ +M G D T + +L + + G + A ++ M S+G +
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 538 IRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L K+G E A LL + + Y ++ L R
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCC 243
Y L DG ++ + +FDEM G S NS V N +I L K+ ++E +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS-----VTYNTLIDGLCKSRRVEDAAQL 527
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
++ G K D TYNSL+T F G KA +I ++M C D TY +I L K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+GR++ A KL + ++ +G + + ++ + + + A+ + EM PP +
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 364 YVSLIESYV--KSGKLETALRLWDEMKIAGYRPNF-ALYTL 401
++ + G + A+ E+ G+ P F +LY L
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 181/449 (40%), Gaps = 4/449 (0%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
Y P + L GL R L D MV LV V+ L K ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD---LVTYGIVVNGLCKRGDID 238
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
++ KK++ + YN++I N A ++ M+ + TY +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
L GR A +L +M R P + F++L+D+ K G+L A K++ EM
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y SLI + +L+ A +++ M PN Y +I+ K+ ++D M
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
F +M + G + TY L+ + + D+A ++ M + G+ P + TY++LL L N
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFI 537
V+ A + ++ D+ ++++ + K G V+ + G++ N
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 538 IRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILG 597
+ + GL E A L D Y +++ +R ++ L+ +
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 598 ATKHKAHSFMCGLFTGPEHRGQPVLSFVR 626
+ + + GL T H G+ SF++
Sbjct: 599 SCRFVGDASTIGLVTNMLHDGRLDKSFLK 627
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 11/353 (3%)
Query: 241 FCCFKKIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
FC +I DA G + D+ T+N+LI +A + + M C D
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY +++ L K G +D A L ++M+ PG+ I+ +++D++ ++ A+ +
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
EM G RP Y SLI G+ A RL +M PN ++ +I++ K G
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
KL A + +M K P TY+ L+ ++D A ++ M + P + TY
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSS 529
L+ K VD ++ EM G + VT + ++ + + D A + M S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
G+ + L + +G E+A + E S + D+ Y ++ + +
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 182/393 (46%), Gaps = 16/393 (4%)
Query: 153 VTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGD 212
V L D D LSL + + Q P Y + D L ++ + LF EM
Sbjct: 227 VVNGLCKRGDIDLALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM--- 282
Query: 213 SANSGVS-LLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGL 271
N G+ +V N +I+ L + + + + + T+++LI F+ +G
Sbjct: 283 -DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
+A ++Y+ M K S D TY +I RLD A +F+ M + P + + +
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
L+ KA R+D M++ EM G Y +LI + ++ + + A ++ +M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
P+ Y+++++ +GK++ A+ F ++++ P TY ++E +G+++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVY 510
L+ S++ G++P + TYT +++ K L + A + EMK G D T + ++ +
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 511 IKEG----SVDL--ALRWLRFMGSS---GIRTN 534
+++G S +L +R RF+G + G+ TN
Sbjct: 582 LRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 8/407 (1%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEVSFCCFKKI 247
L + + FD V L ++M N G+S L + +I + +L ++ K+
Sbjct: 87 LLSAIAKMNKFDLVISLGEQM----QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRL 307
G + D T NSL+ F + A + M + DS T+ +I L + R
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 308 DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSL 367
A L M +G +P L + +V+ + K G +D A+ + +M P IY ++
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
I++ + AL L+ EM G RPN Y +I G+ A SDM +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
P T++ L++ G++ A KLY+ M + P + TY+ L+ +D A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 488 IL-LEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
+ L + + VT + ++ + K VD + R M G+ N L
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 547 KSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLM 593
++ ++A+ + + V+ D++ Y+ +L L C K E L+
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL--CNNGKVETALV 487
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 151/347 (43%), Gaps = 9/347 (2%)
Query: 139 TQLDKLQFVPNMTHVTQALKVVND----GDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLN 194
T++D PN+ ++ + + DA L +R+ +P+ + L D
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFV 337
Query: 195 RSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKI 254
+ + L+DEM+ S + + + +I ++L+ + F+ + C
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDI---FTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
+ TYN+LI F + E++ M + + ++ TY +I ++ D A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
++M G P + ++ L+D + G++++A+ V ++ P Y +IE K+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
GK+E L+ + + G +PN YT ++ + G + A + F +M++ G LP TY
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
L+ H G + +L M + ST ++ +L + +L
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRL 621
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 129/323 (39%), Gaps = 1/323 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A ++ M K+ + ++ +AK + D L ++M+ G L ++ L++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ +L A+ V +M GY P SL+ + ++ A+ L +M GY+P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ + +I + + A++ M G P TY ++ G ID A+ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
M + PG+ Y ++ L N K V+ A + EM G + VT + ++
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G A R L M I N L ++ +K G A+ L + + + D+ Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 574 TSILAHLVRCQEEKNERHLMSIL 596
+S++ +H+ ++
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELM 387
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 1/331 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ + TY ++ +G AF + ME D + +I +L K +D A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF+EM+ +G RP + ++SL+ + GR A ++ +M P + +LI++
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GK A +L D+M P+ Y +I +LD A F M P
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L++ S +++ +L+ M++ GL TYT L+ L + D A K+
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M + G D+ +L+ + G ++ AL +M S I+ + +I + E K+G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ L + K +++ Y ++++ L
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 142/279 (50%), Gaps = 7/279 (2%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T+N+LI F+ +G +A ++++ M K S D TY +I RLD A ++F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ P L+ + +L+ K+ R++ ++ EM G Y +LI+ G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A +++ +M G P+ Y+++++ +GKL+ A+ F M+K+ Y +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+E +G++D L+ S++ G++P + TY +++ L +K+L+ A +L +MK G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 498 SVDV-TASDVLMVYIKEG----SVDL--ALRWLRFMGSS 529
D T + ++ ++++G S +L +R RF+G +
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 3/293 (1%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L D + F + L D+M+ S + + N +I ++L+ + F+ +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDI---FTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
C D +TYN+LI F E++ M + D+ TY +I L G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A K+F++M G P + ++ L+D + G+L+ A++V M+ + IY ++I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
E K+GK++ L+ + + G +PN Y +I L A + M++ G L
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
P TY L+ H G + +L M + ST ++ +L + +L
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 550
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 3/300 (1%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M++ + TY ++I + ++ A L +M G+ P + +SL++
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GYRP + +LI K A+ L D M G +PN Y
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+V+ K G +D+A + + ME A + +++ +D A+ L+ M
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G+RP + TY+ L++ L + A+++L +M + + VT + ++ ++KEG
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I + F L CM L + AK + E V+ DL Y +++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 167/407 (41%), Gaps = 10/407 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK 246
L + + + FD V L ++M +G S N L N +I + ++ ++ K
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHN-----LYTYNILINCFCRRSQISLALALLGK 70
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ G + T +SL+ + + A + + M + D+ T+ +I L +
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
A L M RG +P L + +V+ + K G +D A + +M I+ +
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
+I+S K ++ AL L+ EM+ G RPN Y+ +I G+ A SDM +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P T+ L++ G+ A KL++ M + P + TY L+ +D A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 487 KILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
++ M + D+ + L+ + K V+ R M G+ + L +
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL 592
G ++A+ + + V+ D++ Y+ +L L C K E+ L
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL--CNNGKLEKAL 415
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 1/285 (0%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ ++ +AK + D L ++M+ G L + L++ + ++ A+ + +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
GY P SL+ Y ++ A+ L D+M GYRP+ +T +I K
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
A++ M + G P TY ++ G ID A L N M A + + + ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIR 532
L + VD A + EM+ G + VT S ++ G A + L M I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 533 TNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
N L ++ +K G + A+ L + + + D+ Y S++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 10/347 (2%)
Query: 141 LDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFD 200
LD++ PN + L + + + F W K +S + Y + L R F
Sbjct: 144 LDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQ 203
Query: 201 GVQLLFDEMVGDSA---NSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
++ + EMV D N S ++ C + KA + F+++ G D
Sbjct: 204 LIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEW------FERMYKTGLMPDEV 257
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TY++++ ++ G + +YE T D+ + ++ ++G D + QEM
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
K +P + ++ +L+++MG+AG+ A + EM G P +L++ Y K+
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTPSTYAC 436
AL+LW+EMK + +F LY ++ A G + A F+DM E P +Y
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+L ++ + G+ + AM+L+ M AG++ + T L+ L K +D
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYR-------------PPPTIYVSLIESYVKSG 375
F SL+D + D+A+ V +R + P TI+ ++ +KS
Sbjct: 140 FLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVT---MKSL 196
Query: 376 KLETALRLWDEMKIAGYRPNFAL----YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
+ +L +EM + + L Y+ +I + + A+ F M K G +P
Sbjct: 197 RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDE 256
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
TY+ +L++++ SG+++ + LY G +P ++VL + D +L E
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 492 MKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
MK+M +V + L+ + + G LA M +G+ N + L + K+
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 551 YESAKPLLETYVNSAAKVDLILYTSIL 577
A L E +D ILY ++L
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLL 403
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 144/358 (40%), Gaps = 37/358 (10%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
LSL+ A W P + +L + D+DG++ + EM V V N
Sbjct: 276 LSLYERAVATGW-KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNV---VVYNT 331
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+++ + +A K ++ F ++ +AG + +T +L+ ++ A +++E M+
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR-GFRPGLNIFASLVDSMGKAGRLDSA 345
+D Y ++ A G + A +LF +MK RP + ++++ G G+ + A
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
M++ EM G + L++ K+ +++ + ++D G +P+ L ++
Sbjct: 452 MELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
Query: 406 HAKSGKLDIAMSAFSDMEKAG---------FLPTPSTYA--------------------- 435
A + A + +E+A + + Y
Sbjct: 512 MALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPF 571
Query: 436 --CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
CL+++ + + + A +L T GL PGL T+ L + L AA+ LE
Sbjct: 572 CNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALE 629
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L K E + K+++ K YN++I G A ++ M
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
D TY MI + +SGR A +L ++M R P + F++L++++ K G++ A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+++ +M G P Y S+I+ + K +L A R+ D M P+ ++ +I +
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K+ ++D M F +M + G + TY L+ G +D A L N M ++G+ P
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 467 STYTVLLTLLANKKLVDVAAKILLEM-KAMGYSVD 500
T+ +L L +KK + A IL ++ K+ G+ ++
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLE 321
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 5/305 (1%)
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
M +T C D T+ ++ L GR+ A L M G +P + ++++ + K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
+SA+ + +M + IY ++I+ K G A L+ EM G P+ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I+S +SG+ A DM + P T++ L+ G++ A ++Y M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLAL 520
+ P TY ++ + ++ A ++L M + S D VT S ++ Y K VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
M GI N L + G ++A+ LL ++S + I + S+LA L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 581 VRCQE 585
+E
Sbjct: 297 CSKKE 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y + D RS + + L +M+ N V A +I L K K+ + +
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA---LINALVKEGKVSEAEEIYG 170
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G T TYNS+I F + A + +SM SC D T+ +I K+
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
R+D ++F EM RG + +L+ + G LD+A + M G P +
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Query: 366 SLIESYVKSGKLETALRLWDEMK 388
S++ S +L A + ++++
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQ 313
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 149/340 (43%), Gaps = 1/340 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
FK++++ G TY LI L+ G KA E+ M++ + TY +MI K
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
AF +F++M G +P + ++ +++ + G +D A++ EM+ +RP
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
++ +I Y KSG + +L ++D M+ G P + +I + +++ A+ +M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
AG TY +++ +A+ G A + + + N GL + TY LL +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 484 VAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
A + EM A + ++L+ + + G V A ++ M G++ +
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+C K+G A +E K ++ YT+++ R
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWAR 811
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 160/382 (41%), Gaps = 6/382 (1%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAK 233
R +P+ Y L RD D +M G+ + LV + ++ +K
Sbjct: 336 RARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM----KEEGIEMSLVTYSVIVGGFSK 391
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
A E + F + + ++ Y +I +A + ME+ +
Sbjct: 392 AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
Y M+ +F+ +K GF P + + L++ K G++ A++V M+
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G + Y +I +VK A ++++M G +P+ LY +I + G +D
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
A+ +M+K PT T+ ++ +A SG + ++++++ M G P + T+ L+
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIR 532
L K+ ++ A +IL EM G S + T + ++ Y G A + + + G+
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 533 TNNFIIRQLFESCMKSGLYESA 554
+ F L ++C KSG +SA
Sbjct: 692 VDIFTYEALLKACCKSGRMQSA 713
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 6/281 (2%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I AK+ + S F ++ GC T+N LI + K KA EI + M
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+ TY ++ A G AF+ F ++ G + + +L+ + K+GR+ SA+
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
V EM +Y LI+ + + G + A L +MK G +P+ YT I +
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+K+G ++ A +ME G P TY L++ A + + A+ Y M G++P
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 467 STYTVLLTLLANKKLVDVA------AKILLEMKAMGYSVDV 501
+ Y LLT L ++ + A I EM G VD+
Sbjct: 835 AVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM 875
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 3/315 (0%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y M+ +G + +D+ +F++MV + V L N +I ++ + K
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY---NNIISAFCGMGNMDRAIQTVK 578
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
++Q + T T+ +I + G ++ E+++ M + C+ T+ +I L +
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR 638
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+++ A ++ EM G + + ++ G A + ++ G Y
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE 698
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+L+++ KSG++++AL + EM N +Y ++I+ A+ G + A M+K
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P TY + + +G ++ A + M G++P + TYT L+ A L + A
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Query: 486 AKILLEMKAMGYSVD 500
EMKAMG D
Sbjct: 819 LSCYEEMKAMGIKPD 833
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ P+ ++ + G +S D +FD M V + N +I L + ++E
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM---RRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ ++ AG + TY ++ + + G KAFE + ++ +D TYE ++
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
KSGR+ +A + +EM R ++ L+D + G + A + +M+ G +
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y S I + K+G + A + +EM+ G +PN YT +I+ A++ + A+S
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHA------MKLYNSMTNAGL 462
+ +M+ G P + Y CLL + I A M + M AGL
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG 321
++ + +G ++A E +E M S Y +I A +D A ++MK G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 322 FRPGLNIFASLVDSMGKAGR-------LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
L ++ +V KAG D A ++H + +IY +I ++ ++
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA-------SIYGKIIYAHCQT 427
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
+E A L EM+ G A+Y +++ + + F +++ GF PT TY
Sbjct: 428 CNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTY 487
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
CL+ ++ G+I A+++ M G++ L TY++++ K A + +M
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 495 MGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFM 526
G DV ++++ + G++D A++ ++ M
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 7/260 (2%)
Query: 323 RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR 382
+P F +V G+ G + A + MR G P IY SLI +Y ++ AL
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
+MK G + Y++++ +K+G + A F + ++ S Y ++ H
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL---TLLANKKLVDVAAKILLEMKAMGYSV 499
+ ++ A L M G+ ++ Y ++ T++A++K V K L K G++
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL---KECGFTP 482
Query: 500 DVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
V L+ +Y K G + AL R M G++ N + +K + +A +
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 559 ETYVNSAAKVDLILYTSILA 578
E V K D+ILY +I++
Sbjct: 543 EDMVKEGMKPDVILYNNIIS 562
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 184/407 (45%), Gaps = 13/407 (3%)
Query: 120 AVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVN-DGDAGLSLFRWAKRQSW 178
A+ +V +V+R + PE L+ L+ V + L+ + + L F WA+
Sbjct: 50 AINHVVNIVRR-EIHPE--RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPS 106
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN-SGVSLLVACNRVIQYLAKAEKL 237
Y+P+ Y L L + ++ + + +M S + SG +L +I+ K +
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF----IIEQYGKNGHV 162
Query: 238 EVSFCCFKKI-QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ + F + + GC+ + YNSL+ + + + A+ + M + D TY +
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
++ +G++ A + EM RGF P L++ + AG L+SA ++ +M G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+ P + LIE+ KSG++E + ++ G + Y +I + +K GK+D A
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAF 342
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
++ + G P PS YA +++ +G D A ++ M P YT+L+T+
Sbjct: 343 RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMC 402
Query: 477 A-NKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSV-DLALR 521
K VD AA L+EM MG D++ +K G DLA+R
Sbjct: 403 GRGGKFVD-AANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMR 448
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 107/305 (35%), Gaps = 55/305 (18%)
Query: 127 VVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVND----------GDAGLSLFRWAKRQ 176
+++++ +D ++ VP Q + V N +L R R+
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN---SGVSLLVACNRVIQYLAK 233
P Y +L +G + Q DEM N G LL I+ L
Sbjct: 212 GL-KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLL------IEGLLN 264
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
A LE + K+ G D +T+N LI G E+Y + K +D T
Sbjct: 265 AGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDT 324
Query: 294 YELMIPNLAKSGRLDAAFKL-----------------------------------FQEMK 318
Y+ +IP ++K G++D AF+L F +MK
Sbjct: 325 YKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
+ P ++ L+ G+ G+ A +EM G P + + + GK +
Sbjct: 385 VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHD 444
Query: 379 TALRL 383
A+R+
Sbjct: 445 LAMRI 449
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 1/331 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ + TY ++ +G A + ME D + +I +L K +D A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF+EM+ +G RP + ++SL+ + GR A ++ +M P + +LI++
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GK A +L+D+M P+ Y ++ +LD A F M P
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L++ S +++ +L+ M++ GL TYT L+ L + D A K+
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M + G D+ +L+ + G ++ AL +M S I+ + +I + E K+G
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ L + K +++ Y ++++ L
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 23/381 (6%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCYVMLF----DGLNRSRDFDGVQLLFDEMVGDSANSGV 218
GD L+L K ++ +D V++F D L + R D LF EM V
Sbjct: 239 GDTDLALNLLNKMEAAKIEAD---VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 219 ---SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKA 275
S L++C + A +L +S KKI + T+N+LI F+ +G +A
Sbjct: 296 VTYSSLISCLCSYGRWSDASQL-LSDMIEKKINP-----NLVTFNALIDAFVKEGKFVEA 349
Query: 276 FEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS 335
++Y+ M K S D TY ++ RLD A ++F+ M + P + + +L+
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 336 MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
K+ R++ ++ EM G Y +LI+ G + A +++ +M G P+
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 396 FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
Y+++++ +GKL+ A+ F M+K+ Y ++E +G++D L+
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG-YSVDVTASDVLMVYIKEG 514
S++ G++P + TY +++ L +K+L+ A +L +MK G T + ++ ++++G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 515 ----SVDL--ALRWLRFMGSS 529
S +L +R RF+G +
Sbjct: 590 DKAASAELIREMRSCRFVGDA 610
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 3/293 (1%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L D + F + L+D+M+ S + + N ++ ++L+ + F+ +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDI---FTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
C D TYN+LI F E++ M + D+ TY +I L G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A K+F++M G P + ++ L+D + G+L+ A++V M+ + IY ++I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
E K+GK++ L+ + + G +PN Y +I L A + M++ G L
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
P TY L+ H G + +L M + ST ++ +L + +L
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 625
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 5/312 (1%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M++ + TY ++I + ++ A L +M G+ P + +SL++
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GYRP + +LI K A+ L D M G +PN Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+V+ K G D+A++ + ME A + +++ +D A+ L+ M
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
G+RP + TY+ L++ L + A+++L +M + + VT + ++ ++KEG
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I + F L CM L + AK + E V+ D++ Y +++
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-DKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 578 AHLVRCQEEKNE 589
C+ ++ E
Sbjct: 408 KGF--CKSKRVE 417
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 180/457 (39%), Gaps = 44/457 (9%)
Query: 172 WAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYL 231
W + ++ S S D +L +GL+ + D + L F MV + + +V N+++ +
Sbjct: 42 WGR--AFSSGSGDYREILRNGLHDMKLDDAIGL-FGGMV---KSRPLPSIVEFNKLLSAI 95
Query: 232 AKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK------- 284
AK +K +V +K+Q TYN LI F + A + M K
Sbjct: 96 AKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 155
Query: 285 --TSCLL--------------------------DSSTYELMIPNLAKSGRLDAAFKLFQE 316
S LL D+ T+ +I L + A L
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
M RG +P L + +V+ + K G D A+ + +M I+ ++I+S K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
++ AL L+ EM+ G RPN Y+ +I G+ A SDM + P T+
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
L++ G+ A KLY+ M + P + TY L+ +D A ++ M +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 497 YSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
DV + L+ + K V+ R M G+ + L + G ++A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 556 PLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL 592
+ + V+ D++ Y+ +L L C K E+ L
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGL--CNNGKLEKAL 490
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 140/333 (42%), Gaps = 35/333 (10%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ D TY ++I +G P A + MEK D Y +I L K +D A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
F LF +M+ +G +P + + L+ + GR A ++ +M P + +LI++
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 371 YVKSGKLETALRLWDEM-KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP 429
+VK GKL A +L+DEM K P+ Y +I+ K +++ M F +M + G +
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 430 TPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
TY L+ + D+A ++ M + G+ P + TY +LL L N
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN---------- 439
Query: 490 LEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
G+V+ AL +M ++ + + E+ K+G
Sbjct: 440 ------------------------GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E L + K +++ YT++++ R
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 1/277 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N +I L K + ++ +F F K++ G K D TYN LI+ N G A +
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKA 339
M + + D + +I K G+L A KL+ EM K + P + + +L+ K
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R++ M+V EM G Y +LI + ++ + A ++ +M G P+ Y
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
++++ +G ++ A+ F M+K TY ++E +G+++ L+ S++
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
G++P + TYT +++ K L + A + +EMK G
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 2/357 (0%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I Y + +L ++ K+ G T NSL+ F + +A + + M +
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
D+ T+ ++ L + + A L + M +G +P L + ++++ + K G D A+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
+ +M IY ++I+ K ++ A L+++M+ G +P+ Y +I
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG-LRPGL 466
G+ A SDM + P + L++ G++ A KLY+ M + P +
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRF 525
Y L+ K V+ ++ EM G + VT + ++ + + D A +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 526 MGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
M S G+ + L + +G E+A + E K+D++ YT+++ L +
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
L +AEKL ++ C D YN+LI F + E++ M + + +
Sbjct: 336 LVEAEKLYDEM-----VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
+ TY +I ++ D A +F++M G P + + L+D + G +++A+ V
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
M+ + Y ++IE+ K+GK+E L+ + + G +PN YT ++ + G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+ A + F +M++ G LP TY L+ G + +L M + G ST+
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 471 VLLTLLANKKL 481
++ +L + +L
Sbjct: 571 LVTNMLHDGRL 581
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 1/238 (0%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M+ + TY + I + +L A + +M G+ P + SL++
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GY+P + +L+ + K A+ L + M + G +P+ Y
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
VI K G+ D+A++ + MEK Y +++ +D A L+N M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSV 516
G++P + TY L++ L N A+++L +M + D+ + L+ ++KEG +
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 164/404 (40%), Gaps = 7/404 (1%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
+ SDDC L + + D LF +MV + V ++++ +AK K ++
Sbjct: 37 ASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSI---VEFSKLLSAIAKMNKFDL 93
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+++Q+ G + TY+ I F + A I M K T ++
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN 153
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
R+ A L +M G++P F +LV + + + A+ + M G +P
Sbjct: 154 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 213
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y ++I K G+ + AL L ++M+ + +Y +I+ K +D A F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL-TLLAN 478
+ ME G P TY L+ G+ A +L + M + P L + L+ +
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 479 KKLVDVAAKILLEM-KAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNF 536
KLV+ A K+ EM K+ DV A + L+ + K V+ + R M G+ N
Sbjct: 334 GKLVE-AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
L ++ ++A+ + + V+ D++ Y +L L
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 164/349 (46%), Gaps = 10/349 (2%)
Query: 151 THVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFD-GVQLLFDEM 209
T V Q L+++ GL F W + +S + + ++ + L R+R+ + LF
Sbjct: 69 TTVLQTLRLIKVPADGLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFS-- 125
Query: 210 VGDSANSGVSLLVA-CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLN 268
+ +N V L N +I+ A + S F+ ++ G T+NSL+++ L
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 269 KGLPYKAFEIYESMEKTSCLL-DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN 327
+G A ++++ M +T + DS T+ +I K+ +D AF++F++M+ P +
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 328 IFASLVDSMGKAGRLDSAMKV--HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD 385
+ +++D + +AG++ A V M + P Y +L+ Y +++ A+ ++
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 386 EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA--GFLPTPSTYACLLEMHAA 443
+M G +PN Y +I+ +++ + D A F P T+ L++ H
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+G +D AMK++ M N L P ++Y+VL+ L + D A + E+
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 183/454 (40%), Gaps = 47/454 (10%)
Query: 170 FRWAKRQSWYSPSDDC--YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRV 227
FR K Y + D Y + DGL R+ + M+ + + +++ V
Sbjct: 229 FRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLV 288
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGL--PYKAFEIYESM--- 282
Y K E ++ + F + G K + TYN+LI KGL ++ EI + +
Sbjct: 289 RGYCMKQE-IDEAVLVFHDMLSRGLKPNAVTYNTLI-----KGLSEAHRYDEIKDILIGG 342
Query: 283 --EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
T+ D+ T+ ++I +G LDAA K+FQEM P ++ L+ ++
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 341 RLDSAMKVHMEMRG----FGY---RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
D A + E+ G +P Y + E +GK + A +++ ++ G +
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 394 --PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
P+ Y +I H + GK A M + F+P TY L++ G+ A
Sbjct: 463 DPPS---YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAH 519
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI 511
M + P +T+ +L LA +K + + ++ M L I
Sbjct: 520 DTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLM--------------LEKRI 565
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
++ ++DL+ + +R + SS + F+I +L +G + LL + +D
Sbjct: 566 RQ-NIDLSTQVVRLLFSSAQKEKAFLIVRLL---YDNGYLVKMEELLGYLCENRKLLD-- 619
Query: 572 LYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
+T +L L + Q + I G KHK HS
Sbjct: 620 AHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHS 653
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 183/416 (43%), Gaps = 37/416 (8%)
Query: 137 LDTQLDKLQFVPNMTHVTQAL-KVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNR 195
LD+ LD+ + V L + N G F+W+++Q Y S Y M+ + +
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146
Query: 196 SRDFDGVQLLFDEMVG----------------------DSANSGVSL---------LVAC 224
R + + L + M D A ++ LVA
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNK-GLPYKAFEIYESME 283
N ++ L K++ + + F+ ++D D++TY+ L+ + + LP KA E++ M
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSILLEGWGKEPNLP-KAREVFREMI 264
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
C D TY +M+ L K+GR+D A + + M +P I++ LV + G RL+
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+ +EM G + ++ SLI ++ K+ +++ R+ EMK G PN +++
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ G+ D A F M K P TY +++M +++ A K++ M G+
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDL 518
P + T++VL+ L ++ A +L EM MG VT + + IKE D+
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 7/228 (3%)
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRP--NFALYTLVIESHAKSGKLDIAMSAFSD 421
Y +IES + K+ +WD + + N + +V+ +A++ K+D A+ AF+
Sbjct: 137 YHMMIES---TAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNV 193
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
MEK P + LL S + A +++ +M + P TY++LL +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 252
Query: 482 VDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
+ A ++ EM G D VT S ++ + K G VD AL +R M S + FI
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
L + E A S K D+ ++ S++ + KN
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 177/410 (43%), Gaps = 46/410 (11%)
Query: 135 PELDTQLDK--LQFVPNMTHVTQALKVVND-GDAGLSLFRWAKRQSWYSPSDDCYVMLFD 191
P+L+ L++ ++ P + + + L D G+ G F WA +Q Y S + Y +
Sbjct: 98 PKLELALNESGVELRPGL--IERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVK 155
Query: 192 GLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG 251
L++ R F V L +EM ++
Sbjct: 156 ILSKMRQFGAVWGLIEEMRKENPQL----------------------------------- 180
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
I+ E + L+ F + + KA E+ + M K D + ++ L K G + A
Sbjct: 181 --IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
KLF++M+ R F L F SL+ + G++ A V ++M G+ P Y +L+ Y
Sbjct: 239 KLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
+GK+ A L +M+ G+ PN YT++I++ K +++ AM F +ME+
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
TY L+ G+ID + + M GL P TY ++ K+ + +++ +
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEK 417
Query: 492 MKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIR--TNNFII 538
M+ + Y D+ +V++ + K G V A+R M +G+ + F+I
Sbjct: 418 MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 467
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 12/308 (3%)
Query: 139 TQLDKLQFVPNMTHVTQALK-VVNDGDAG--LSLFRWAKRQSWYSPSDDCYVMLFDGLNR 195
Q+++ F P++ T L N G L R +R+ + P+ +CY +L L +
Sbjct: 276 VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG-FEPNANCYTVLIQALCK 334
Query: 196 SRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKID 255
+ +F EM + V A ++ K K++ + + G
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTA---LVSGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Query: 256 TETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQ 315
TY ++ K + E+ E M + D Y ++I K G + A +L+
Sbjct: 392 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 316 EMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM--RG-FGYRPPPTIYVSLIESYV 372
EM+ G PG++ F +++ + G L A EM RG F T+ + L+ + +
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKL-LLNTVL 510
Query: 373 KSGKLETALRLWDEMKIAGY-RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K KLE A +W + G N +T+ I + G A S +M + F+P P
Sbjct: 511 KDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQP 570
Query: 432 STYACLLE 439
T+A L++
Sbjct: 571 DTFAKLMK 578
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 164/355 (46%), Gaps = 14/355 (3%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL- 221
G+A ++ F WA R+ + Y ++ L R + F + + MV + N + L
Sbjct: 131 GEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLT 190
Query: 222 VACNRVIQ--YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY 279
+A + ++ Y+ +A +L F++ + G K TE++N+L+ + A ++
Sbjct: 191 IAMDSFVRVHYVRRAIEL------FEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
+ +K + DS +Y +MI +K G ++ K+ +EM GF P ++ L++ +G+
Sbjct: 245 NA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
GR++ ++++ ++ G P +Y ++I +++ + + ++R + M PN Y
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+ ++ K K+ A+ F +M G LPT L+ + G AM +Y
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEG 514
AG R S Y +LL L+ + + EM+ GY DV + YI +G
Sbjct: 424 AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE----YIVDG 474
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 181 PSDDC-YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
P D C Y ++ G ++ + + ++ + EMV + G L + + +I+ L + ++
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMV--ESGFGPDCL-SYSHLIEGLGRTGRIND 308
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
S F I+ G D YN++I F++ ++ Y M C + TY ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
L K ++ A ++F+EM RG P + S + + G +AM ++ + R G R
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
+ Y L++ + GK L +WDEM+ +GY + +Y +++ G L+ A+
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ + GF P Y+ L AS + + A KL+
Sbjct: 489 EEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 8/336 (2%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL--VACNRVIQYLAK 233
+S SP + L GL +R D L EMV + S L V N +I K
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVD----LAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
A ++E + + GC+ D TYN L+ + + + +A + M ++ LD+ +
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 294 YELMIPNLAKSGRLDAAFK-LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
Y ++ + D + + +EM+ RGF ++ +++L+++ +A A ++ EM
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEEM 351
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
R G Y SLI+++++ G A +L D+M G P+ YT +++ KSG +
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
D A F+DM + P +Y L+ SG++ A+KL+ M P T+ +
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ L K + A K+ +M G+++D SD L+
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 158/394 (40%), Gaps = 41/394 (10%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I L K+ ++ + F +++ + ++ + YN I + + + A IY M+
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
L TY I L K + D L +M+ GF P + F +D + + ++ A++
Sbjct: 76 SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP-NFALYTLVIE-S 405
M G P Y LI ++GK+ A+ +W+ M +G P N A LV+
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPS-TYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
HA+ K+D+A ++ K+ + + Y L+ +G+I+ A L + M+ G P
Sbjct: 196 HAR--KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD------------------------ 500
L TY VLL + ++ A ++ EM G +D
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 501 ------------VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKS 548
V+ S ++ + + + A R M G+ N L ++ ++
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 549 GLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
G AK LL+ D I YT+IL HL +
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 155/363 (42%), Gaps = 8/363 (2%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
+R I L K +K ++ ++ G D +N + L + A + + M +
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
D +Y ++I L ++G++ A +++ M G P A+LV + A ++D
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 345 AMK-VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A + V E++ + +Y +LI + K+G++E A L M G P+ Y +++
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ + L A ++M ++G +Y LL+ H ++ H K YN M
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC---RVSHPDKCYNFMVKEMEP 319
Query: 464 PGLS---TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLA 519
G +Y+ L+ A ++ EM+ G ++V T + ++ +++EG+ +A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+ L M G+ + + + KSG + A + + D I Y S+++
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 580 LVR 582
L R
Sbjct: 440 LCR 442
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 2/291 (0%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
Y I NL KSG +D A ++F EM+ +R + + + + R + A ++ +M+
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G+ P Y I K K + L +M+ G+ P+ + + ++ + K+
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
A+ F M + G P +Y L+ +G++ A++++N+M +G+ P L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 474 TLLANKKLVDVAAKILL-EMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGI 531
L + + VD+A +++ E+K+ + + L+ + K G ++ A +M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ L + + + A+ ++ V S ++D Y +L R
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 206 FDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL 265
++ MV + G +V+ + +I+ +A ++ F++++ G ++ TY SLI
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Query: 266 FLNKG---------------------LPY--------------KAFEIYESMEKTSCLLD 290
FL +G + Y KA+ ++ M + D
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD 429
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
+ +Y +I L +SGR+ A KLF++MKG+ P F ++ + + +L +A KV
Sbjct: 430 AISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWD 489
Query: 351 EMRGFGYRPPPTIYVSLIES 370
+M G+ + +LI++
Sbjct: 490 QMMDKGFTLDRDVSDTLIKA 509
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 182/419 (43%), Gaps = 15/419 (3%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ P Y L +GL + D+ G L EMV + V ++ + +I L + ++E
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV---ISYSTLINVLCNSGQIE 298
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELM 297
++F ++ GC + T +SL+ +G + A +++ M + L + Y +
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ G + A +F M+ G P + + SL++ K G LD A+ + +M G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P +Y +++E+ + K + A L + M P+ + I+ +G+LD A
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 418 AFSDMEKAGFL-PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F ME+ P TY LL+ A + +I+ A L + G+ STY LL
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 477 ANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRT-- 533
N L +A +++ +M G S D +T + +++ Y K+G + A + L + S G R
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV-SCGRRKWR 597
Query: 534 ------NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEE 586
N I +C + G+ + + V S A +++ IL +VR ++
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQ 656
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 165/403 (40%), Gaps = 50/403 (12%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
F + S F L F+ M+ A G +QYL + KL+ C
Sbjct: 62 FFKSIANSNLFKHTPLTFEVMIRKLAMDGQV------DSVQYLLQQMKLQGFHC------ 109
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
+ + S+I+++ GL +A E++ +++ C Y ++ L R+
Sbjct: 110 ------SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG------------ 356
+ ++++MK GF P + + L+ ++ K ++D A K+ +EM G
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 357 ------------------YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
+ P ++Y +LI K + A L EM G PN
Sbjct: 224 SSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y+ +I SG++++A S + M K G P T + L++ G A+ L+N M
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 459 NA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSV 516
GL+P + Y L+ + + A + M+ +G S ++ T ++ + K GS+
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
D A+ M +SG N + + E+ + ++ A+ L+E
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
++ P + +I G++++ L +MK+ G+ + L+ VI + + G + A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F +++ G P+ Y +L+ +I +Y M G P + TY VLL L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 477 ANKKLVDVAAKILLEMKAMGYSVD------VTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
VD A K+L+EM G D V +S + +KEG +LA R+
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR-ELAERF-----EPV 245
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ N +I L K Y+ A L+ V ++I Y++++
Sbjct: 246 VSVYNALINGL----CKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 181/401 (45%), Gaps = 9/401 (2%)
Query: 161 NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL 220
+D + L + +WA+ + S D Y M D L +++ +D ++ + M GD +
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK----LVT 154
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L ++++ A A + E + F ++ + G + +TE+ N L+ + +A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
+ K+ ++ T+ + I K+ R++ A QEMKG GFRP + + +++ +
Sbjct: 215 QL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
++ EM G P Y +++ S + E ALR+ MK +G +P+ Y
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 401 LVIESHAKSGKLDIAMSAFS-DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I + A++G+L+ A F +M + G STY ++ M+ + D A++L M +
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 460 AGL-RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY-SVDVTASDVLMVYI-KEGSV 516
+ L P + TY LL + V K+L EM + S+D + L+ + +
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
+ A M S I + L E K ++ESA+ +
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 3/280 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N I KA ++E + ++++ G + +Y ++I + + K +E+ ME
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+S TY ++ +L + A ++ MK G +P + L+ ++ +AGRL+
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 345 AMKV-HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY-RPNFALYTLV 402
A +V +EM G + Y S+I Y + + A+ L EM+ + P+ Y +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLP-TPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+ S K G + +M L STY L++ + + A L+ M +
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV 501
+ P T +LL + K + + A +I MK + + V
Sbjct: 468 ITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAPV 507
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 181/401 (45%), Gaps = 9/401 (2%)
Query: 161 NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL 220
+D + L + +WA+ + S D Y M D L +++ +D ++ + M GD +
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK----LVT 154
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L ++++ A A + E + F ++ + G + +TE+ N L+ + +A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
+ K+ ++ T+ + I K+ R++ A QEMKG GFRP + + +++ +
Sbjct: 215 QL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
++ EM G P Y +++ S + E ALR+ MK +G +P+ Y
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 401 LVIESHAKSGKLDIAMSAFS-DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I + A++G+L+ A F +M + G STY ++ M+ + D A++L M +
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 460 AGL-RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY-SVDVTASDVLMVYI-KEGSV 516
+ L P + TY LL + V K+L EM + S+D + L+ + +
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
+ A M S I + L E K ++ESA+ +
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 3/280 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N I KA ++E + ++++ G + +Y ++I + + K +E+ ME
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+S TY ++ +L + A ++ MK G +P + L+ ++ +AGRL+
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 345 AMKV-HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY-RPNFALYTLV 402
A +V +EM G + Y S+I Y + + A+ L EM+ + P+ Y +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLP-TPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+ S K G + +M L STY L++ + + A L+ M +
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV 501
+ P T +LL + K + + A +I MK + + V
Sbjct: 468 ITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAPV 507
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 170/387 (43%), Gaps = 2/387 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
+S Y P++D Y +L + + +++ EM + + N I+ L K +
Sbjct: 205 ESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRK 264
Query: 236 -KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
E + F++++ CK TETYN +I L+ Y ++++Y M C + TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
++ A+ G + A ++F++++ G P + ++ +L++S +AG A ++ M+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G P Y ++++Y ++G A +++EMK G P + L++ +++K+ +
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
+ +M + G P +L ++ GQ K+ M N +STY +L+
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
+ ++ ++ +E+K + D VT + + Y ++ L M SG
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 564
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLET 560
+ + L +C E +L T
Sbjct: 565 DGGTAKVLLSACSSEEQVEQVTSVLRT 591
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F+++Q+ G + D YN+L+ + G PY A EI+ M+ C D ++Y +M+ +
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+G A +F+EMK G P + L+ + KA + + EM G P +
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
S++ Y + G+ ++ EM+ + + Y ++I + K+G L+ F +++
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ F P T+ + ++ ++++ M ++G P T VLL+ ++++ V+
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVE 583
Query: 484 VAAKILLEM 492
+L M
Sbjct: 584 QVTSVLRTM 592
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 5/328 (1%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D +N LI + K +A +Y + ++ + TY L+I +G ++ A +
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 315 QEMKGRGFRP---GLNIFASLVDS-MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
EM+ P G+ ++ + ++ M + G + A+ V M+ +P Y +I
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y K+ K + +L+ EM+ +PN YT ++ + A+ G + A F +++ G P
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
Y L+E ++ +G A ++++ M + G P ++Y +++ L A +
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 491 EMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
EMK +G + + + +L+ Y K V ++ M +G+ + F++ + + G
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSIL 577
+ + +L N D+ Y ++
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILI 503
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
++ F+P + F L+D+ G+ + A +++++ Y P Y LI++Y +G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 377 LETALRLWDEMKIAGYRP---NFALYTLVIESHAK-SGKLDIAMSAFSDMEKAGFLPTPS 432
+E A + EM+ P +Y IE K G + A+ F M++ PT
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY ++ ++ + + + KLY M + +P + TYT L+ A + L + A +I ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 493 KAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLY 551
+ G DV + LM Y + G A M G + + ++ ++GL+
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 552 ESAKPLLE 559
A+ + E
Sbjct: 408 SDAEAVFE 415
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 16/390 (4%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V+CN+V++ L+ +++EV+ + D G + T+ +LI F +G +AF++++
Sbjct: 252 IVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME+ D Y +I K+G L KLF + +G + + +F+S +D K+G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L +A V+ M G P Y LI+ + G++ A ++ ++ G P+ Y+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I+ K G L + + DM K G+ P Y L++ + G + HAM+ M
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSV--- 516
+R + + L+ D A K+ M G DV T + V+ V I E +
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 517 ---DLALRWLRFMG----SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD 569
+ L+ M S+ I N +I LF K E A + + D
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF----KCHRIEDASKFFNNLIEGKMEPD 606
Query: 570 LILYTSILAHLVRCQEEKNERHLMSILGAT 599
++ Y +++ + + +L T
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 149/384 (38%), Gaps = 47/384 (12%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V + +I K L F ++ + G D Y L+ +GL A
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS--------- 331
M S L+ + +I + R D A K+F+ M G +P + F +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 332 -------------LVDSMG-------------------KAGRLDSAMKVHMEMRGFGYRP 359
L D M K R++ A K + P
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 605
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y ++I Y +L+ A R+++ +K+ + PN T++I K+ +D A+ F
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
S M + G P TY CL++ + S I+ + KL+ M G+ P + +Y++++ L +
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFII 538
VD A I + DV A +L+ Y K G + A M +G++ ++ +
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 785
Query: 539 RQLFES-----CMKSGLYESAKPL 557
R L E M G++ KP+
Sbjct: 786 RALSEYNPPKWLMSKGVWVHDKPM 809
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 3/279 (1%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVI---QYLAKAEKLEVSFCCFK 245
L DG R FD +F M V+ RV K K + F
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+Q D N +I L A + + ++ + D TY MI
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
RLD A ++F+ +K F P L+ + K +D A+++ M G +P Y
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
L++ + KS +E + +L++EM+ G P+ Y+++I+ K G++D A + F A
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
LP YA L+ + G++ A LY M G++P
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/512 (19%), Positives = 191/512 (37%), Gaps = 103/512 (20%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANS 216
L + ++ ++ L FRWA+ S D + + L R+ FD +FDEM+ +
Sbjct: 77 LSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKD 132
Query: 217 GVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
F I+D +D + L+ G+ KA
Sbjct: 133 ------------------------FNVLGSIRDR--SLDADVCKFLMECCCRYGMVDKAL 166
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP-GLNIFASLVDS 335
EI+ + ++ + M+ +L S R+D F ++ G P G++ ++D+
Sbjct: 167 EIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDA 226
Query: 336 MGKAGRLDSAMKVHMEMRGFGYR--------------------------------PPPTI 363
+ G + A+ H + G+R P P +
Sbjct: 227 LFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 364 --YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
+ +LI + K G+++ A L+ M+ G P+ Y+ +I+ + K+G L + FS
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL-------- 473
G ++ ++++ SG + A +Y M G+ P + TYT+L+
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 474 ------------------TLLANKKLVDVAAK---------ILLEMKAMGYSVDVTASDV 506
+++ L+D K + +M MGY DV V
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 507 LMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
L+ + K+G + A+R+ M IR N + L + + ++ A +
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 566 AKVDLILYTSILAHLVRCQEEKNERHLMSILG 597
K D+ +T+++ V E+ +H+ +G
Sbjct: 527 IKPDVATFTTVMR--VSIMEDAFCKHMKPTIG 556
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 170/387 (43%), Gaps = 2/387 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
+S Y P++D Y +L + + +++ EM + + N I+ L K +
Sbjct: 183 ESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRK 242
Query: 236 -KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
E + F++++ CK TETYN +I L+ Y ++++Y M C + TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
++ A+ G + A ++F++++ G P + ++ +L++S +AG A ++ M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G P Y ++++Y ++G A +++EMK G P + L++ +++K+ +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
+ +M + G P +L ++ GQ K+ M N +STY +L+
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
+ ++ ++ +E+K + D VT + + Y ++ L M SG
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 542
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLET 560
+ + L +C E +L T
Sbjct: 543 DGGTAKVLLSACSSEEQVEQVTSVLRT 569
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F+++Q+ G + D YN+L+ + G PY A EI+ M+ C D ++Y +M+ +
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+G A +F+EMK G P + L+ + KA + + EM G P +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
S++ Y + G+ ++ EM+ + + Y ++I + K+G L+ F +++
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ F P T+ + ++ ++++ M ++G P T VLL+ ++++ V+
Sbjct: 502 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVE 561
Query: 484 VAAKILLEM 492
+L M
Sbjct: 562 QVTSVLRTM 570
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 5/328 (1%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D +N LI + K +A +Y + ++ + TY L+I +G ++ A +
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 315 QEMKGRGFRP---GLNIFASLVDS-MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
EM+ P G+ ++ + ++ M + G + A+ V M+ +P Y +I
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y K+ K + +L+ EM+ +PN YT ++ + A+ G + A F +++ G P
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
Y L+E ++ +G A ++++ M + G P ++Y +++ L A +
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 491 EMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
EMK +G + + + +L+ Y K V ++ M +G+ + F++ + + G
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSIL 577
+ + +L N D+ Y ++
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILI 481
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
++ F+P + F L+D+ G+ + A +++++ Y P Y LI++Y +G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 377 LETALRLWDEMKIAGYRP---NFALYTLVIESHAK-SGKLDIAMSAFSDMEKAGFLPTPS 432
+E A + EM+ P +Y IE K G + A+ F M++ PT
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY ++ ++ + + + KLY M + +P + TYT L+ A + L + A +I ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 493 KAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLY 551
+ G DV + LM Y + G A M G + + ++ ++GL+
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 552 ESAKPLLE 559
A+ + E
Sbjct: 386 SDAEAVFE 393
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 1/363 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V NR++ + K +K +V KK++ G + D T+N +I F A I
Sbjct: 85 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 144
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K D T ++ + R+ A L +M G++P + + +++DS+ K
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
R++ A E+ G RP Y +L+ S + A RL +M PN Y+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++++ K+GK+ A F +M + P TY+ L+ +ID A ++++ M +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG-YSVDVTASDVLMVYIKEGSVDLA 519
G + +Y L+ K V+ K+ EM G S VT + ++ + + G VD A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+ M GI + + L +G E A + E +D++ YT+++
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 580 LVR 582
+ +
Sbjct: 445 MCK 447
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 9/274 (3%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TY++L+ F+ G +A E++E M + S D TY +I L R+D A ++F M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+G + + +L++ KA R++ MK+ EM G Y +LI+ + ++G +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A + +M G P+ Y +++ +G+L+ A+ F DM+K TY +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ +G+++ A L+ S++ GL+P + TYT +++ L K L+ + +MK G
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 498 -SVDVTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
D T SD G + L+ ++ M S G
Sbjct: 502 MKNDCTLSD--------GDITLSAELIKKMLSCG 527
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 10/349 (2%)
Query: 242 CCFK---------KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS 292
CCF+ K+ G + D T SL+ F + A + + M + D
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
Y +I +L K+ R++ AF F+E++ +G RP + + +LV+ + + R A ++ +M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
P Y +L++++VK+GK+ A L++EM P+ Y+ +I ++
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
D A F M G L +Y L+ + +++ MKL+ M+ GL TY L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGI 531
+ VD A + +M G S D+ ++L+ + G ++ AL M +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ + K+G E A L + K D++ YT++++ L
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 3/305 (0%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D T+ ++I ++ A + +M G+ P SLV+ + R+ A+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+M GY+P Y ++I+S K+ ++ A + E++ G RPN YT ++ S
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
+ A SDM K P TY+ LL+ +G++ A +L+ M + P + TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGS 528
+ L+ L +D A ++ M + G DV + + L+ + K V+ ++ R M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
G+ +N L + ++G + A+ D+ Y +L L C +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL--CDNGEL 416
Query: 589 ERHLM 593
E+ L+
Sbjct: 417 EKALV 421
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 169/396 (42%), Gaps = 21/396 (5%)
Query: 104 DHVMVGDVKKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDG 163
D V +G + F V+ V +V + E+ + D + + + + + K VND
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKM---VEIGYKPDIVAYNAIIDSLCKT-KRVNDA 209
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGL-NRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
F+ +R+ P+ Y L +GL N SR D +LL D M+ V +
Sbjct: 210 ---FDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSD-MIKKKITPNV---I 261
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+ ++ K K+ + F+++ D TY+SLI +A ++++ M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
CL D +Y +I K+ R++ KLF+EM RG + +L+ +AG +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D A + +M FG P Y L+ +G+LE AL ++++M+ + YT V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I K+GK++ A S F + G P TY ++ G + LY M GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
T + + ++A+++ +M + GY+
Sbjct: 502 MKNDCTLS--------DGDITLSAELIKKMLSCGYA 529
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 24/341 (7%)
Query: 306 RLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
+L+ A LF +M K R F P + F L+ ++ K + D + + +M G R +
Sbjct: 65 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
+I + ++ AL + +M GY P+ ++ + ++ A+S M +
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
G+ P Y +++ + +++ A + + G+RP + TYT L+ L N
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 485 AAKILLEMKAMGYSVDV-TASDVLMVYIKEGSV----DLALRWLRFMGSSGIRTNNFIIR 539
AA++L +M + +V T S +L ++K G V +L +R I T + +I
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL---MSIL 596
L C+ + E A + + V+ D++ Y +++ + + ++ L MS
Sbjct: 304 GL---CLHDRIDE-ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 597 GATKHKA--HSFMCGLF-TGPEHRGQPVLSFVREFFQGVDY 634
G + ++ + G F G + Q EFF +D+
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQ-------EFFSQMDF 393
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 154/335 (45%), Gaps = 1/335 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I L E S +K++ +G TYN+++ + KG A E+ + M+
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
D TY ++I +L +S R+ + L ++M+ R P + +L++ G++
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A ++ EM FG P + +LI+ ++ G + AL+++ M+ G P+ Y ++++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
K+ + D+A + M++ G TY +++ +G +D A+ L N M+ G+ P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWL 523
+ TY+ L+ A +I+ + +G S + + S ++ + G + A+R
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
M G ++F L S K+G A+ +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 1/329 (0%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D T+N LI + +G K+ + + MEK+ TY ++ K GR AA +L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
MK +G + + L+ + ++ R+ + +MR P Y +LI +
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
GK+ A +L +EM G PN + +I+ H G A+ F ME G P+ +Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
LL+ + + D A Y M G+ G TYT ++ L +D A +L EM
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 495 MGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
G D VT S ++ + K G A + + G+ N I L +C + G +
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 554 AKPLLETYVNSAAKVDLILYTSILAHLVR 582
A + E + D + ++ L +
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCK 560
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 279 YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
Y M++ + TY MI L K+G LD A L EM G P + +++L++ K
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
GR +A ++ + G P IY +LI + + G L+ A+R+++ M + G+ +
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+ +++ S K+GK+ A M G LP ++ CL+ + SG+ A +++ MT
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVD 517
G P TY LL L + A K L + A+ +VD + L+ + K G++
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
A+ M I +++ L + G
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 143/332 (43%), Gaps = 3/332 (0%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T N+++ + G + + M K D +T+ ++I L G + + L Q+M
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ G+ P + + +++ K GR +A+++ M+ G Y LI +S ++
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
L +M+ PN Y +I + GK+ IA ++M G P T+ L
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
++ H + G A+K++ M GL P +Y VLL L D+A + MK G
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Query: 498 SVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKP 556
V +T + ++ K G +D A+ L M GI + L K G +++AK
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 557 LLETYVNSAAKVDLILYTSILAHLVR--CQEE 586
++ + I+Y++++ + R C +E
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 160/408 (39%), Gaps = 4/408 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
+S Y+P+ Y + + F L D M ++ V N +I L ++
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY---NMLIHDLCRSN 317
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
++ + + ++ + TYN+LI F N+G A ++ M + T+
Sbjct: 318 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 377
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I G A K+F M+ +G P + L+D + K D A +M M+
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
G Y +I+ K+G L+ A+ L +EM G P+ Y+ +I K G+ A
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
+ + G P Y+ L+ G + A+++Y +M G T+ VL+T
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
L V A + + M + G + + D L+ Y G A M G
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
F L + K G A+ L++ A VD ++Y ++L + +
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 3/339 (0%)
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQ 229
FR ++P + DG +R + L EM + N G +L N ++
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM--GNQNGGPNLTTY-NILLH 802
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
+K + + SF ++ I G D T +SL+ + +I ++ +
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D T+ ++I +G ++ AF L + M G + ++V + + R + V
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
EM G P Y+ LI + G ++TA + +EM P + ++ + AK
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GK D A M K +PT +++ L+ + +G + A++L M+N GL+ L +Y
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
VL+T L K + +A ++ EMK G+ + T L+
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 160/387 (41%), Gaps = 24/387 (6%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQAL--------KVVNDGDAGLSLFRWAKRQSWYSP 181
+WK G Q+D L P++ T A+ K+ D L Q+ P
Sbjct: 739 QWKAGIYFREQMDNLGHTPDIV-TTNAMIDGYSRMGKIEKTND----LLPEMGNQNG-GP 792
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
+ Y +L G ++ +D LL+ ++ N + + C+ ++ + ++ LE+
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSII---LNGILPDKLTCHSLVLGICESNMLEIGL 849
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
K G ++D T+N LI+ G AF++ + M LD T + M+ L
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
++ R + + EM +G P + L++ + + G + +A V EM PP
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 362 TIYVSLIESYVKSGKLETA---LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
+++ + K GK + A LR +MK+ P A +T ++ K+G + A+
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLV---PTIASFTTLMHLCCKNGNVIEALEL 1026
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT-LLA 477
M G +Y L+ A G + A +LY M G +TY L+ LLA
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1086
Query: 478 NKKLVDVAAKILLEMKAMGYSVDVTAS 504
+ A IL ++ A G+ ++ S
Sbjct: 1087 RETAFSGADIILKDLLARGFITSMSLS 1113
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
+L +AEK K + +DT YN+L+T G KA ++ M + S L
Sbjct: 633 HLREAEKF------LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG-FRPGLNIFASLVDSMGKAGRLDSAMKV 348
DS TY +I L + G+ A +E + RG P ++ VD M KAG+ + +
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+M G+ P ++I+ Y + GK+E L EM PN Y +++ ++K
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
+ + + + G LP T L+ S ++ +K+ + G+ T
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ +L++ ++ A ++ M ++G S+D D ++
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 2/317 (0%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D T+N L+T G +A E M L ++ +++ +I SG AF +F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
EM G P + SL+ + K G L A K + +Y +L+ + KS
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG-FLPTPST 433
G L A+ L+ EM P+ YT +I + GK IA+ + E G LP
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
Y C ++ +GQ + M N G P + T ++ + ++ +L EM
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 494 AMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
++T ++L+ Y K V + R + +GI + L +S + E
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 553 SAKPLLETYVNSAAKVD 569
+L+ ++ +VD
Sbjct: 847 IGLKILKAFICRGVEVD 863
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 2/294 (0%)
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+F F ++ G TY SL+ G +A + +S+ +D+ Y ++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG-YR 358
+ KSG L A LF EM R P + SL+ + + G+ A+ E G
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P +Y ++ K+G+ + + ++M G+ P+ +I+ +++ GK++
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
+M P +TY LL ++ + + LY S+ G+ P T L+ +
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGI 531
++++ KIL G VD ++L+ G ++ A ++ M S GI
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 144/333 (43%), Gaps = 1/333 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ + TY ++ +G AF + ME + Y +I +L K D A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF EM+ +G RP + ++SL+ + R A ++ +M P + +LI++
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GKL A +L+DEM P+ Y+ +I +LD A F M P
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L+ + +ID ++L+ M+ GL TYT L+ + D A +
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M + G ++ + L+ + K G ++ A+ ++ S + + + E K+G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E L + K D+I+Y ++++ R
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 15/346 (4%)
Query: 241 FCCFKKIQDA----------GCKIDTETYNSLI-TLFLNKGLPYKAFEIYESMEKTSCLL 289
+C K+I DA G + DT T+ +LI LFL+ +A + + M + C
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS-EAVALVDRMVQRGCQP 223
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
+ TY +++ L K G +D AF L +M+ + I+++++DS+ K D A+ +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
EM G RP Y SLI + A RL +M PN + +I++ K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GKL A + +M K P TY+ L+ ++D A ++ M + P + TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGS 528
L+ K +D ++ EM G + VT + ++ + + D A + M S
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYT 574
G+ N L + K+G E A + E S K++ +YT
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS--KMEPTIYT 507
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 147/314 (46%), Gaps = 9/314 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGV---SLLVACNRVIQYLAKAEKLEVSFC 242
Y + D L + R D LF EM V S L++C + + A +L +S
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL-LSDM 321
Query: 243 CFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLA 302
+KI + T+N+LI F+ +G +A ++Y+ M K S D TY +I
Sbjct: 322 IERKINP-----NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
RLD A +F+ M + P + + +L++ KA R+D +++ EM G
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
Y +LI + ++ + A ++ +M G PN Y +++ K+GKL+ AM F +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
+++ PT TY ++E +G+++ L+ S++ G++P + Y +++ K L
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 483 DVAAKILLEMKAMG 496
+ A + +M+ G
Sbjct: 557 EEADALFRKMREDG 570
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 3/300 (1%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M++ + TY ++I + ++ A L +M G+ P + +SL++
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GYRP + +LI K A+ L D M G +PN Y
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+V+ K G +D+A + + ME A Y+ +++ D A+ L+ M N
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDL 518
G+RP + TY+ L++ L N + A+++L +M + +V + L+ ++KEG +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I + F L CM L E AK + E ++ +++ Y +++
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-AKHMFELMISKDCFPNVVTYNTLI 407
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 4/356 (1%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
Q P+ Y ++ +GL + D D L ++M + V V + VI L K
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV---VIYSTVIDSLCKYR 274
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+ + F ++++ G + + TY+SLI+ N A + M + + T+
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I K G+L A KL+ EM R P + ++SL++ RLD A + M
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
P Y +LI + K+ +++ + L+ EM G N YT +I ++ D A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
F M G P TY LL+ +G+++ AM ++ + + + P + TY +++
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSG 530
+ V+ + + G DV + ++ + ++G + A R M G
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 6/306 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGL-NRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
D L+LF + + P+ Y L L N R D +LL D M+ N V V
Sbjct: 277 DDALNLFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSD-MIERKINPNV---V 331
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I K KL + + ++ D TY+SLI F +A ++E M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
C + TY +I K+ R+D +LF+EM RG + +L+ +A
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D+A V +M G P Y +L++ K+GKLE A+ +++ ++ + P Y ++
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
IE K+GK++ F + G P Y ++ G + A L+ M G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 463 RPGLST 468
P T
Sbjct: 572 LPDSGT 577
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 5/279 (1%)
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV--SLIESYVKSGK 376
GR F G + ++ + + +LD A+ + M RP P+I+ L+ + K K
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGM--VKSRPLPSIFEFNKLLSAIAKMKK 100
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+ + L ++M+ G N Y ++I + ++ +A++ M K G+ P+ T +
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
LL + +I A+ L + M G RP T+T L+ L A ++ M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 497 YSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
+ VT V+ K G +DLA L M ++ I N I + +S K + A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 556 PLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMS 594
L N + ++I Y+S+++ L + + L+S
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 8/409 (1%)
Query: 153 VTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGD 212
+T +K + G F WA R+ + + ++ D L+ D L+ + + +
Sbjct: 63 ITSVIKDEVNRQLGFRFFIWASRRERLRSRES-FGLVIDMLSEDNGCD----LYWQTLEE 117
Query: 213 SANSGVSLLVACNRV-IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGL 271
+ GVS+ C V I AK E + F ++++ C+ D TYN ++ + + + +
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 272 PYK-AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+ AF +Y M K +C + T+ +++ L K GR A K+F +M GRG P +
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
L+ + + G D A K+ EM+ G P + +L++ + K G++ A L +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G+ Y+ +I+ ++ + A +++M K P Y L++ + +G+I+ A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY 510
+KL +SM + G+ P Y ++ L + L++ + LEM D +L+
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 511 I-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ + G V A + SG + L + KSG + A+ LL
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 176/386 (45%), Gaps = 20/386 (5%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRV-----IQYLAKA 234
SP+ + +L DGL + Q +FD+M G ++ NRV I L +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG--------ISPNRVTYTILISGLCQR 246
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
+ + F ++Q +G D+ +N+L+ F G +AFE+ EK +L Y
Sbjct: 247 GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
+I L ++ R AF+L+ M + +P + ++ L+ + KAG+++ A+K+ M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
G P Y ++I++ G LE L EM P+ +T++I S ++G +
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM-----TNAGLRPGLSTY 469
A F+++EK+G P+ +T+ L++ SG++ A L + M + LR S
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGS 528
T++ + ++ A + L G S D+ + +VL+ + + G +D AL+ L +
Sbjct: 487 RSFDTMVESGSILK-AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESA 554
G+ ++ L + G E A
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 17/346 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L DGL R+R + L+ M+ + + L +IQ L+KA K+E +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI---LIQGLSKAGKIEDALKLLS 362
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+ G DT YN++I +GL + + M +T D+ T+ ++I ++ ++G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A ++F E++ G P + F +L+D + K+G L A + +M P ++++
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME---VGRPASLFL 479
Query: 366 SL-------IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
L ++ V+SG + A R G P+ Y ++I ++G +D A+
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
+ ++ G P TY L+ G+ + A KL+ + + R + Y L+T
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD--FRHSPAVYRSLMTWSCR 597
Query: 479 KKLVDVAAKILLE-MKAMGYSVDVTASDVLMVYIKEGSVDLALRWL 523
K+ V VA + ++ +K + D TA+++ + KEG + ALR L
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGETERALRRL 642
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 9/329 (2%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM-VGDSANSGVSLLVACNRVIQYLAKA 234
+S SPS + L DGL +S + +LL +M VG A+ + L + NR + ++
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
+ ++ D G D +YN LI F G A ++ ++ DS TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME-MR 353
+I L + GR + AFKLF FR ++ SL+ + ++ A + M+ ++
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKD--DFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
T + IE K G+ E ALR E+ YT+ + +SG+
Sbjct: 614 KISCLDDET--ANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFH 671
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK--LYNSMTNAGLRPGLSTYTV 471
A+ FS + + L TP + L+ Q+D A++ LY N L P + Y +
Sbjct: 672 EALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY-L 730
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVD 500
L +LL + + +++ +++ M+ GY+VD
Sbjct: 731 LSSLLESTEKMEIVSQLTNRMERAGYNVD 759
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 2/268 (0%)
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
F ++D + + D + E++ G + LI +Y K G E A+ + MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 389 IAGYRPNFALYTLVIESHAKSGKL-DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
RP+ Y +++ + +A + +++M K P T+ L++ G+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVL 507
A K+++ MT G+ P TYT+L++ L + D A K+ EM+ G D A + L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 508 MV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAA 566
+ + K G + A LR G L + ++ Y A L +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 567 KVDLILYTSILAHLVRCQEEKNERHLMS 594
K D+ILYT ++ L + + ++ L+S
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLS 362
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 148/336 (44%), Gaps = 13/336 (3%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGD----SANSGVSLLVAC 224
F W+ Q + + + Y +L ++ + L DEMV D +A + L+ +C
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE-IYESME 283
LAK ++ F K + + +YN+++ L YK E +Y+ M
Sbjct: 195 GEA--GLAKQAVVQ-----FMKSKTFNYRPFKHSYNAILNSLLGVK-QYKLIEWVYKQML 246
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+ D TY +++ + G++D +LF EM GF P + L+ +GK +
Sbjct: 247 EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPL 306
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+A+ M+ G P Y +LI+ ++G LE DEM AG RP+ YT++I
Sbjct: 307 AALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI 366
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ SG+LD A F +M G LP TY ++ +G+ A L M + G
Sbjct: 367 TGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 426
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
P Y+ L++ L + A K++ EM G+ V
Sbjct: 427 PNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYV 462
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 1/314 (0%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
++Y L++ A+ G A ++L EM GF F L+ S G+AG A+ M+
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
+ F YRP Y +++ S + + + ++ +M G+ P+ Y +++ ++ + GK
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV 471
+D F +M + GF P TY LL + + A+ N M G+ P + YT
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSG 530
L+ L+ ++ L EM G DV V++ Y+ G +D A R M G
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNER 590
N F + +G + A LL+ + + ++Y++++++L + + R
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Query: 591 HLMSILGATKHKAH 604
++ + H H
Sbjct: 450 KVIREMVKKGHYVH 463
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 146/334 (43%), Gaps = 6/334 (1%)
Query: 146 FVPNMTHVTQALK-VVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQL 204
F P+M L + N+G A + R K + P Y +L G + + D +
Sbjct: 291 FQPDMQTYNPILSWMCNEGRAS-EVLREMK-EIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 205 LFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLIT 264
DEMV V N +I L K+E + ++I++ G +D+ TYN LI
Sbjct: 349 YRDEMVKQGM---VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
+ G KAF +++ M TY +I L + + A +LF+++ G+G +P
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
L + +L+D G +D A + EM P Y L+ GK E A L
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
EMK G +P+ Y +I ++K G A +M GF PT TY LL+ + +
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
+ + A +L M + G+ P S++ ++ ++N
Sbjct: 586 QEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 39/351 (11%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N ++Q + ++E + +++ G + D +TYN +++ N+G +A E+
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLR 316
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M++ + DS +Y ++I + +G L+ AF EM +G P + +L+ +
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 341 RLDSA-----------------------------------MKVHMEMRGFGYRPPPTIYV 365
++++A +H EM G +P Y
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
SLI + K A L++++ G +P+ + +++ H G +D A S +M+
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
P TY CL+ G+ + A +L M G++P +Y L++ + K A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 486 AKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNN 535
+ EM ++G++ + + L+ + K +LA LR M S GI N+
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 162/415 (39%), Gaps = 39/415 (9%)
Query: 200 DGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
+ ++ LFDE+V + + +++ + ++ + CF +++ G TET
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS--------------- 304
N ++TL A+ Y M + + T+ +MI L K
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 305 --------------------GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
GR++ A + EMK +GF+P + + ++ M GR
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR--- 310
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A +V EM+ G P Y LI +G LE A DEM G P F Y +I
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
K++ A ++ + G + TY L+ + G A L++ M G++P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWL 523
TYT L+ +L K A ++ ++ G D+ + LM + G++D A L
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+ M I ++ L G +E A+ L+ K D I Y ++++
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 154/399 (38%), Gaps = 39/399 (9%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
CN ++ L++ ++E ++ + + K + T+N +I + +G KA M
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
E TY ++ + GR++ A + EMK +GF+P + + ++ M GR
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR- 310
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A +V EM+ G P Y LI +G LE A DEM G P F Y +
Sbjct: 311 --ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I K++ A ++ + G + TY L+ + G A L++ M G+
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALR 521
+P TYT L+ +L K A ++ ++ G D+ + LM + G++D A
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD------------ 569
L+ M I ++ L G +E A+ L+ K D
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 570 -----------------------LILYTSILAHLVRCQE 585
L+ Y ++L L + QE
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 3/300 (1%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK---SGRLDAAFKLF 314
T+N +I G KA ++ E M+ C + +Y +I K +G++ A +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+EM P L F L+D K L +MKV EM +P Y SLI
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
GK+ A+ + D+M AG +PN Y +I K+ L A+ F ++ G +PT Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
L++ + G+ID L M G+ P + TY L+ L ++ A K+ ++ +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 495 MGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
G VT ++ Y ++G A L+ M G++ + + + K G ++A
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 8/321 (2%)
Query: 180 SPSDDCYVMLFDG---LNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
SP+ Y L DG L + + EMV + + L N +I K +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN---LTTFNILIDGFWKDDN 311
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
L S FK++ D K + +YNSLI N G +A + + M + TY
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I K+ L A +F +KG+G P ++ L+D+ K G++D + EM G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P Y LI ++G +E A +L+D++ G P+ + +++E + + G+ A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTL 475
+M K G P TY +++ + G + A + M LR +++Y VLL
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 476 LANKKLVDVAAKILLEMKAMG 496
+ K ++ A +L EM G
Sbjct: 551 YSQKGKLEDANMLLNEMLEKG 571
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 98/266 (36%), Gaps = 40/266 (15%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y L +GL + D+MV L+ N +I K + L+ +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN---LITYNALINGFCKNDMLKEA 385
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++ G T YN LI + G F + E ME+ + D TY +I
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L ++G ++AA KLF ++ +G P L F L++ + G A + EM G +P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 361 PTIYV------------------------------------SLIESYVKSGKLETALRLW 384
Y L++ Y + GKLE A L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSG 410
+EM G PN Y +V E G
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 152/412 (36%), Gaps = 44/412 (10%)
Query: 224 CNRVIQYLAKAEKLEVSF-CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE-- 280
C R +L K + VS FK + S + F+ G ++ I+
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
SM C+ +S ++++ A + R + F+ F+ G++ L+ ++ K
Sbjct: 144 SMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKEN 202
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
R V+ EM +P + +I + K+GK+ A + ++MK+ G PN Y
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 401 LVIESHAKSG--------------------------------------KLDIAMSAFSDM 422
+I+ + K G L +M F +M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
P +Y L+ G+I A+ + + M +AG++P L TY L+ ++
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 483 DVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
A + +K G ++L+ Y K G +D M GI + L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 542 FESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLM 593
++G E+AK L + + S DL+ + ++ R E + L+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQ-LTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 169/386 (43%), Gaps = 42/386 (10%)
Query: 134 GPELDTQLDKLQFVPNMTH--VTQALK-VVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLF 190
P+ D + + + P ++ V Q LK N G F WA+R ++ S + Y +L
Sbjct: 50 NPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILV 109
Query: 191 DGLNRSRDFDGVQLLFDEMVG---------------------DSANSGVSLLVACNRVIQ 229
+ L S+ F LL+D ++ AN A NR+++
Sbjct: 110 EILGSSKQF---ALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVE 166
Query: 230 YLAKA-----EKLEVSFCCFKKIQDA----------GCKIDTETYNSLITLFLNKGLPYK 274
+ K ++L S C K + A G +TY+ L+ +
Sbjct: 167 FGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASG 226
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A ++++ M + +C++D Y ++ L KSG +D +K+FQEM G +P FA +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ AG + SA KV M+ + P + +I++ K+ K++ A L DEM G P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ Y ++ H +++ A S M++ LP TY +L++ G+ D A +++
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKK 480
M+ P ++TYTV++ L KK
Sbjct: 407 EGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
PS Y +L G R RD G + +FDEM+ N V LL A N ++ L K+ ++
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEML--ERNCVVDLL-AYNALLDALCKSGDVDGG 262
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
+ F+++ + G K D ++ I + + G + A+++ + M++ + + T+ +I
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L K+ ++D A+ L EM +G P + S++ ++ A K+ M P
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA-KSGKLDIAMSAF 419
Y +++ ++ G+ + A +W+ M + P A YT++I K GKL+ A F
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQID 448
M G P +T L GQ+D
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
++ +V +++++ A AF+ M + G P LL ++HA + +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSV 516
G+ P TY++L+ A + A K+ EM VD+ A + L+ K G V
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
D + + MG+ G++ + + + +G SA +L+ + DL+
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLD----RMKRYDLVPNVYT 315
Query: 577 LAHLVR--CQEEK 587
H+++ C+ EK
Sbjct: 316 FNHIIKTLCKNEK 328
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 196/503 (38%), Gaps = 51/503 (10%)
Query: 124 IVEVVKRWKWGPELDTQLDKLQFVPNMTH--VTQALKVVNDGDAGLSLFRWAKRQSWYSP 181
I ++ W L + L VP H V L + L FRW +R
Sbjct: 91 ICRMMDNRAWTTRLQNSIRDL--VPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRH 148
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
D ++ + L + + + +M + V +I+ KA ++ S
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVV---LIESYGKAGIVQESV 205
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
F+K++D G + ++YNSL + L +G A + M TY LM+
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
S RL+ A + F++MK RG P F ++++ + ++D A K+ +EM+G P
Sbjct: 266 FLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSV 325
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y ++I+ Y+ +++ LR+++EM+ +G PN Y+ ++ +GK+ A + +
Sbjct: 326 VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKN 385
Query: 422 M--------------------EKAGFLPTPST----------------YACLLEMHAASG 445
M KAG + + Y L+E +
Sbjct: 386 MMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKAS 445
Query: 446 QIDHAMKLYNSMTNA--------GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ A+KL +++ L S Y ++ L N A + ++ G
Sbjct: 446 AYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV 505
Query: 498 SVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
++++ + KEG+ D + L+ M G+ + L +S M G AK
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 558 LETYVNSAAKVDLILYTSILAHL 580
L++ V D L+ S++ L
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESL 588
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A N +I+YL + + F+++ G + D + N+LI +G P ++EI + M
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ +S+ YEL+I + G A M G P ++F S+++S+ + GR+
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Query: 343 DSAMKVHMEM--RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+A +V M M + G + ++E+ + G +E AL D + G+ +
Sbjct: 595 QTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLL 654
Query: 401 LVIESHAKS 409
V+ K+
Sbjct: 655 SVLSEKGKT 663
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
++ S Y +I L +G+ A LF+++ RG + + +L+ K G DS+ ++
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ-DALNNLIRGHAKEGNPDSSYEI 530
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
M G Y LI+SY+ G+ A D M G+ P+ +L+ VIES +
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 409 SGKLDIAMSAFSDM--EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
G++ A M + G A +LE G ++ A+ + + G L
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL 650
Query: 467 STYTVLLTLLANKKLVDVAAKIL 489
+ LL++L+ K A K+L
Sbjct: 651 DS---LLSVLSEKGKTIAALKLL 670
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 178/423 (42%), Gaps = 29/423 (6%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
G+ G F WA +Q Y S + + L++ R F V L +EM + L
Sbjct: 111 GNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELF 170
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+++ A A ++ + ++ G + D + L+ G +A +++E M
Sbjct: 171 VV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 283 EKTSCLLDSSTYELMIPNL----------AKSGRLDAAFKLFQEMKGRGFRPGLNIFASL 332
E PNL + G+L A ++ +MK G P + +F +L
Sbjct: 229 R-----------EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 333 VDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK-LETALRLWDEMKIAG 391
+ AG++ A + +MR G+ P Y LI++ ++ K ++ A+R++ EM+ G
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
+ YT +I K G +D S DM K G +P+ TY ++ H Q + +
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-- 509
+L M G P L Y V++ L V A ++ EM+A G S V + V+M+
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD-TFVIMING 456
Query: 510 YIKEGSVDLALRWLRFMGSSGIRT--NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAK 567
+ +G + A + M S GI + ++ L + ++ E AK + N +
Sbjct: 457 FTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSS 516
Query: 568 VDL 570
+L
Sbjct: 517 CEL 519
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 293 TYEL---MIPNLAKSGRLDAAFKLFQEMKGRGFRPGL---NIFASLVDSMGKAGRLDSAM 346
+YE+ M+ L+K + A + L +EM R P L +F L+ A + A+
Sbjct: 130 SYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAV 187
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+V EM +G P ++ L+++ K+G ++ A +++++M+ + PN +T ++
Sbjct: 188 EVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGW 246
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+ GKL A M++AG P + LL +A +G++ A L N M G P +
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 467 STYTVLLTLLA-NKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLR 524
+ YTVL+ L +K +D A ++ +EM+ G D VT + ++ + K G +D L
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 525 FMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
M G+ + Q+ + K +E L+E DL++Y ++
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRS-RDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAK 233
R+ + P+ +CY +L L R+ + D +F EM + + A +I K
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA---LISGFCK 354
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
++ + ++ G TY ++ K + E+ E M++ C D
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM- 352
Y ++I K G + A +L+ EM+ G PG++ F +++ G L A EM
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 353 -RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTLVIESHAKS 409
RG P SL+ + V+ KLE A +W + K + N + +T+ I +
Sbjct: 475 SRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAK 534
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
G + A S DM + +P P+TYA L++
Sbjct: 535 GHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 274 KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
+A ++ ME+ C D TY +I K G +D + + +M+ +G P + ++
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+ K + + +++ +M+ G P IY +I K G+++ A+RLW+EM+ G
Sbjct: 385 VAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS--TYACLLEMHAASGQIDHAM 451
P + ++I G L A + F +M G P T LL +++ A
Sbjct: 445 PGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAK 504
Query: 452 KLYNSMTN--AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM 495
+++ ++N + +S +T+ + L K V A L+M M
Sbjct: 505 DVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEM 550
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 29/418 (6%)
Query: 167 LSLFRWA-KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
L FRW + Y S Y +F + R+ G+ +++G GV+L
Sbjct: 75 LDFFRWCYSLRPGYKHSATAYSQIFRTVCRT----GLLGEVPDLLGSMKEDGVNLDQTMA 130
Query: 226 RVI-QYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI-YESME 283
+++ L ++ K E + +++ G ++ Y+S++ + K A I ++ +E
Sbjct: 131 KILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLE 190
Query: 284 KTSCLLDSSTYELMI----PNLA---------KSGRLDAAFK-LFQEMKG-RGFRPGLNI 328
+ D T ++I P + + + FK +F+++KG + F+
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWS 250
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMR------GFGYRPPPTIYVSLIESYVKSGKLETALR 382
+ + G G LD+A+ + EM+ G + P Y SLI GK + AL
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
+WDE+K++G+ P+ + Y ++I+ KS ++D AM + +M+ GF+P Y CLL+
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-V 501
+ ++ A +L+ M G+R TY +L+ L + + ++K G VD +
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 502 TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
T S V + +EG ++ A++ + M + G + I L K G ++ + L++
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMK 488
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D TYNSLI + G A +++ ++ + D+STY ++I KS R+D A +++
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
EM+ GF P ++ L+D KA ++ A ++ +M G R Y LI+ ++
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G+ E L+ ++K G + +++V + GKL+ A+ +ME GF T
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
+ LL G+ D KL + L P +
Sbjct: 468 SSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TYNS+++ F+ KG A + + M + C D +TY ++I L K GR D A + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+G + ++ +L++++GKA RLD A ++ M+ G P Y ++IE K+GKL
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 378 ETALRLWDEMKIAGYRPNFALYTLV 402
+ A + M AG PN T++
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 164/422 (38%), Gaps = 53/422 (12%)
Query: 163 GDAGLSLFRWAK-RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL 221
G A +L W + + S + P + Y +L G +S D ++ EM N V
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM---QYNGFVPDT 359
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
+ N ++ KA K+ + F+K+ G + TYN LI G F ++
Sbjct: 360 IVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCD 419
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
++K +D+ T+ ++ L + G+L+ A KL +EM+ RGF L +SL+ K GR
Sbjct: 420 LKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
D K+ +R P + + +E+ +K + K Y P F
Sbjct: 480 WDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR----------PQSKDKDYTPMFPSKGS 529
Query: 402 VIESHAKSGKLDIAMSA--FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
++ + G D SA S ME + +P Q+ H
Sbjct: 530 FLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYM-----------DQLAHQRN------- 571
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLA 519
+P K L +A +E K + VD+ + L +Y+ +G + LA
Sbjct: 572 ---QP--------------KPLFGLARGQRVEAKPDSFDVDMMNT-FLSIYLSKGDLSLA 613
Query: 520 LRWLRFMGSSGIRT-NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+ G+ ++ + S +K G +++A+ +L+ + D+ Y I+
Sbjct: 614 CKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQ 673
Query: 579 HL 580
L
Sbjct: 674 GL 675
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 255 DTETYNSLITLFLNKG---LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
D + N+ ++++L+KG L K FEI+ M T L S TY M+ + K G A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTD--LTSYTYNSMMSSFVKKGYFQTAR 650
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
+ +M + + ++ +GK GR D A V ++
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV-------------------LDRL 691
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K G GY + +Y +I + K+ +LD A F M+ G P
Sbjct: 692 TKQG---------------GYL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDV 735
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+Y ++E+++ +G++ A K +M +AG P T T+L
Sbjct: 736 VSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 326 LNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT-IYVSLIESYVKSGKLETALRLW 384
+N F S+ S G L A K+ G G + Y S++ S+VK G +TA +
Sbjct: 597 MNTFLSIYLSKGD---LSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVL 653
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
D+M + A Y ++I+ K G+ D+A + + K G Y L+ +
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKA 713
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
++D A +L++ M + G+ P + +Y ++ + + + A K L M G
Sbjct: 714 TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 161/389 (41%), Gaps = 56/389 (14%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANS 216
LK+ D L F WAK ++ S S + + ++ L ++R F + + +++ N
Sbjct: 89 LKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVL---VNG 145
Query: 217 GVSLLVA-----------CN---RVIQYLAKA----EKLEVSFCCFKKIQDAGCKIDTET 258
GV L C+ RV L K +K + F +++D G E+
Sbjct: 146 GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N+ ++ L +G A Y M + + T +++ +SG+LD +L Q+M+
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
GFR + +L+ + G L SA+K+ M G +P + +LI + ++ KL+
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM---------------- 422
A +++ EMK PN Y +I +++ G ++A + DM
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 423 -------------------EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+K +P ST++ L+ D +LY SM +G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEM 492
P T+ +L++ + D A+++L EM
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+F SL + + +A M+M+ +G+ P + + S + G+++ ALR + EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
+ PN +V+ + +SGKLD + DME+ GF T +Y L+ H G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDV 506
A+KL N M +GL+P + T+ L+ + A+K+ EMKA+ + + VT + +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 507 LMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL-FESCMKSGLYESAKPLLETYVNSA 565
+ Y ++G ++A R+ M +GI+ + L F C ++ ++A+ +V
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ-----FVKEL 404
Query: 566 AKVDLILYTSILAHLVRCQ 584
K +L+ +S + L+ Q
Sbjct: 405 DKENLVPNSSTFSALIMGQ 423
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 161/389 (41%), Gaps = 56/389 (14%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANS 216
LK+ D L F WAK ++ S S + + ++ L ++R F + + +++ N
Sbjct: 89 LKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVL---VNG 145
Query: 217 GVSLLVA-----------CN---RVIQYLAKA----EKLEVSFCCFKKIQDAGCKIDTET 258
GV L C+ RV L K +K + F +++D G E+
Sbjct: 146 GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N+ ++ L +G A Y M + + T +++ +SG+LD +L Q+M+
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
GFR + +L+ + G L SA+K+ M G +P + +LI + ++ KL+
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM---------------- 422
A +++ EMK PN Y +I +++ G ++A + DM
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 423 -------------------EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+K +P ST++ L+ D +LY SM +G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEM 492
P T+ +L++ + D A+++L EM
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 328 IFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
+F SL + + +A M+M+ +G+ P + + S + G+++ ALR + EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
+ PN +V+ + +SGKLD + DME+ GF T +Y L+ H G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDV 506
A+KL N M +GL+P + T+ L+ + A+K+ EMKA+ + + VT + +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 507 LMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL-FESCMKSGLYESAKPLLETYVNSA 565
+ Y ++G ++A R+ M +GI+ + L F C ++ ++A+ +V
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ-----FVKEL 404
Query: 566 AKVDLILYTSILAHLVRCQ 584
K +L+ +S + L+ Q
Sbjct: 405 DKENLVPNSSTFSALIMGQ 423
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 142/326 (43%), Gaps = 1/326 (0%)
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
++E + F +I G K + TY +LI A E++ M + TY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
++ L + GR A L ++M R P + F +L+D+ K G+L A +++ M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
P Y SLI G L+ A +++ M+ G PN +YT +I KS +++
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
M F +M + G + TY L++ + G+ D A +++N M++ P + TY VLL
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
L V+ A I M+ ++ VT + ++ K G V+ A + S G++
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLE 559
N + + GL A L +
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFK 492
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 162/361 (44%), Gaps = 7/361 (1%)
Query: 140 QLDKLQFVPNMTHVTQALKVV---NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRS 196
++ KL F P++ T L N + ++LF + P+ Y L L ++
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKN 201
Query: 197 RDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDT 256
R + LF++M + + V V N ++ L + + + + + + +
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNV---VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 257 ETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
T+ +LI F+ G +A E+Y M + S D TY +I L G LD A ++F
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
M+ G P I+ +L+ K+ R++ MK+ EM G Y LI+ Y G+
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+ A ++++M P+ Y ++++ +GK++ A+ F M K TY
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+++ G+++ A L+ S+ + G++P + TYT +++ + L+ A + +MK G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 497 Y 497
+
Sbjct: 499 F 499
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 9/362 (2%)
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
R++ +AK + +V F+++Q G T N ++ P +A M K
Sbjct: 88 RLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
D T+ ++ R++ A LF ++ G GF+P + + +L+ + K L+ A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+++ +M G RP Y +L+ + G+ A L +M PN +T +I++
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
K GKL A ++ M + P TY L+ G +D A +++ M G P
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLR 524
YT L+ K V+ KI EM G + VL+ Y G D+A
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 525 FMGSS----GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
M S IRT N ++ L C +G E A + E ++++ YT I+ +
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGL--CC--NGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 581 VR 582
+
Sbjct: 444 CK 445
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D TY SLI GL +A +++ ME+ C + Y +I KS R++ K+F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYV 372
EM +G + L+ GR D A +V +M R PP I Y L++
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS--SRRAPPDIRTYNVLLDGLC 409
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
+GK+E AL +++ M+ N YT++I+ K GK++ A F + G P
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
TY ++ G I A L+ M G P S Y
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 142/355 (40%), Gaps = 38/355 (10%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK---------------- 318
A +++ M + L + ++ +AK R D LF++M+
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 319 ---------------GR----GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
G+ GF P L F SL++ R++ A+ + ++ G G++P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y +LI K+ L A+ L+++M G RPN Y ++ + G+ A
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
DM K P T+ L++ G++ A +LYN M + P + TY L+ L
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 480 KLVDVAAKILLEMKAMG-YSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFII 538
L+D A ++ M+ G Y +V + ++ + K V+ ++ M G+ N
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 539 RQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLM 593
L + G + A+ + + A D+ Y +L L C K E+ LM
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL--CCNGKVEKALM 419
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 140/350 (40%), Gaps = 32/350 (9%)
Query: 53 PGLSNDTNFMRCYCNNGSGSKEFTEEIEYLDESGSVIYKGKGVRSVEPGLDDHVMVGDVK 112
P + T +RC C N + +E ++ G+ G R P + +
Sbjct: 186 PNVVTYTTLIRCLCKN----RHLNHAVELFNQMGT-----NGSR---PNVVTY------- 226
Query: 113 KPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNM---THVTQALKVVNDGDAGLSL 169
NAL V + E+ RW L + K + PN+ T + A V L
Sbjct: 227 ----NAL-VTGLCEI-GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQ 229
+ + S Y P Y L +GL D + +F M N V +I
Sbjct: 281 YNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLM---ERNGCYPNEVIYTTLIH 336
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
K++++E F ++ G +T TY LI + G P A E++ M
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY +++ L +G+++ A +F+ M+ R + + ++ M K G+++ A +
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
+ G +P Y ++I + + G + A L+ +MK G+ PN ++Y
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 5/236 (2%)
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y ++ + + + + AL L+ M + P+ +T ++ AK + D+ +S F M+
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 424 KAGFLPTPSTYACLLEMHAA--SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
G P T C + MH S Q A M G P L T+T LL +
Sbjct: 111 ILGIPPLLCT--CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 482 VDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
++ A + ++ MG+ + VT + ++ K ++ A+ MG++G R N
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
L + G + A LL + + ++I +T+++ V+ + + L +++
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 172/373 (46%), Gaps = 22/373 (5%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNR 226
+ W + Q+W++ S+ ++ML + +F+G + + + +G + N +++
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPN-----VISYTA 179
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM--EK 284
+++ + K + F+++Q +G + TY ++ F+ +A E++E++ EK
Sbjct: 180 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 239
Query: 285 TSCLL-DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
S L D Y +MI K+G + A K+F M G+G + SL M
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYK 296
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
K++ +M+ +P Y LI++Y ++ + E AL +++EM AG RP Y +++
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
++ A SG ++ A + F M + P +Y +L + + ++ A K + + G
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS-----VDL 518
P + TY L+ A V+ ++ +M+ G + A+ ++ I + S
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG----IKANQTILTTIMDASGRCKNFGS 472
Query: 519 ALRWLRFMGSSGI 531
AL W + M S G+
Sbjct: 473 ALGWYKEMESCGV 485
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 9/352 (2%)
Query: 141 LDKLQFVPNMTHVTQALKVVNDG---DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR 197
L K+ PN+ T ++ G + ++FR + S PS Y ++
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR-RMQSSGPEPSAITYQIILKTFVEGD 223
Query: 198 DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
F + +F+ ++ + + + +I KA E + F + G T
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 258 TYNSLITLFLNKGLPYKAF-EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
TYNSL++ + YK +IY+ M+++ D +Y L+I ++ R + A +F+E
Sbjct: 284 TYNSLMSFETS----YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 339
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
M G RP + L+D+ +G ++ A V MR P Y +++ +YV +
Sbjct: 340 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 399
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+E A + + +K+ G+ PN Y +I+ +AK+ ++ M + M +G +
Sbjct: 400 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 459
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
+++ A+ Y M + G+ P VLL+L + + ++ A ++
Sbjct: 460 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
F L+ + GK G + A +V + G P Y +L+ESY + GK A ++ M+
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFS---DMEKAGFLPTPSTYACLLEMHAASG 445
+G P+ Y +++++ + K A F D +K+ P Y ++ M+ +G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 446 QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD 505
+ A K+++SM G+ TY L++ + K V +KI +M+ DV +
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYA 318
Query: 506 VLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNS 564
+L+ Y + + AL M +G+R + L ++ SG+ E AK + ++
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 565 AAKVDLILYTSILAHLVRCQE 585
DL YT++L+ V +
Sbjct: 379 RIFPDLWSYTTMLSAYVNASD 399
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 168/372 (45%), Gaps = 46/372 (12%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGL-NRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
+ LF W ++ S S + F G N S+ + Q + DE ++ +++ + CN
Sbjct: 118 IQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDE------STKINVYI-CN 170
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLIT--LFLNKGLPYKAFEIYESME 283
++ L K KL+ F +++ G K D TYN+L+ + + G P KA E+ +
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP-KAIELIGELP 229
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+DS Y ++ A +GR + A Q+MK G P + ++SL++S G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A ++ EM+ G P + +L++ Y+K G + + L E++ AGY N Y +++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLP---------------------------TPSTY-A 435
+ +K+GKL+ A S F DM+ G + +TY
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 436 CLLEM-------HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
C L M + +G+++ M++ M + P +T+ +L+ +KL +A +
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQT 469
Query: 489 LLEMKAMGYSVD 500
L+M + G+ ++
Sbjct: 470 TLDMHSKGHRLE 481
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 3/304 (0%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
STY I + + A +++Q + + + I S++ + K G+LDS +K+ +
Sbjct: 133 STYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQ 191
Query: 352 MRGFGYRPPPTIYVSLIESYVK-SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
M+ G +P Y +L+ +K A+ L E+ G + + +Y V+ A +G
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+ + A + M+ G P Y+ LL ++ G A +L M + GL P T
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSS 529
LL + L D + ++L E+++ GY+ + +LM + K G ++ A M
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
G+R++ + + + +S ++ AK L + K DL++ ++L R E ++
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 590 RHLM 593
+M
Sbjct: 432 MRMM 435
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 146/321 (45%), Gaps = 4/321 (1%)
Query: 274 KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
++ + S+++ + +L +++ + SGR +LF+ M+ G + ++ ++S +
Sbjct: 81 RSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCI 139
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+G A + A++++ + + I S++ VK+GKL++ ++L+D+MK G +
Sbjct: 140 KFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK 198
Query: 394 PNFALYTLVIESHAK-SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
P+ Y ++ K A+ ++ G Y +L + A++G+ + A
Sbjct: 199 PDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAEN 258
Query: 453 LYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYI 511
M G P + Y+ LL + K A +++ EMK++G + V + +L VYI
Sbjct: 259 FIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYI 318
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
K G D + L + S+G N L + K+G E A+ + + + D
Sbjct: 319 KGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGY 378
Query: 572 LYTSILAHLVRCQEEKNERHL 592
+ +++ L R + K + L
Sbjct: 379 ANSIMISALCRSKRFKEAKEL 399
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 131 WKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKR------QSWYSPSDD 184
+K EL T++ + VPN +T LKV G LF ++ + Y+ ++
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG----GLFDRSRELLSELESAGYAENEM 343
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCF 244
Y ML DGL+++ + + +FD+M G S A + +I L ++++ + +
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDG---YANSIMISALCRSKRFKEAKELS 400
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+ + K D N+++ + G + + M++ + D +T+ ++I K
Sbjct: 401 RDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
A++ +M +G R + +SL+ +GK A V+ +R
Sbjct: 461 KLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLR 509
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 151/364 (41%), Gaps = 9/364 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y + GL + + DG + ++ V + N +I L K K + +
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV---ITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
K+ + G + D+ TYN+LI + G+ A I + D TY +I L G
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A LF E G+G +P + ++ +L+ + G + A ++ EM G P +
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
L+ K G + A L M GY P+ + ++I ++ K++ A+ M
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G P TY LL + + + M+ Y +M G P L T+ +LL L + +D A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 486 AKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMG-----SSGIRTNNFIIR 539
+L EMK + D VT ++ + K G +D A R M SS T N II
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 540 QLFE 543
E
Sbjct: 611 AFTE 614
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 1/333 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+++ Y +++ F + + +E++ M + L ST+ ++ L K G +
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
KL ++ RG P L + + + + G LD A+++ + G +P Y +LI
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
K+ K + A +M G P+ Y +I + K G + +A D GF+P
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L++ G+ + A+ L+N G++P + Y L+ L+N+ ++ AA++
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
EM G +V ++L+ + K G V A ++ M S G + F L
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
E+A +L+ +++ D+ Y S+L L +
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 154/351 (43%), Gaps = 5/351 (1%)
Query: 233 KAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS 292
KAE E+ F K+ +G + T+N L+ + KG + ++ + + K L +
Sbjct: 197 KAEGYEL----FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
TY L I L + G LD A ++ + +G +P + + +L+ + K + A +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
G P Y +LI Y K G ++ A R+ + G+ P+ Y +I+ G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+ A++ F++ G P Y L++ + G I A +L N M+ GL P + T+ +L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
+ L V A ++ M + GY D+ ++L+ Y + ++ AL L M +G+
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + L K+ +E +T V +L + +L L R
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 4/328 (1%)
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
+ + P Y L DGL + + LF+E +G V L N +I+ L+
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY---NTLIKGLSNQGM 406
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ + ++ + G + +T+N L+ G A + + M D T+ +
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I + +++ A ++ M G P + + SL++ + K + + M+ + M G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + L+ES + KL+ AL L +EMK P+ + +I+ K+G LD A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 417 SAFSDMEKAGFLPTPS-TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
+ F ME+A + + + TY ++ + A KL+ M + L P TY +++
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTA 503
V++ K LLEM G+ +T
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I + K+E + + D G D TYNSL+ E Y++M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
C + T+ +++ +L + +LD A L +EMK + P F +L+D K G LD
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 345 AMKVHMEMR-GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A + +M + Y +I ++ + + A +L+ EM P+ Y L++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ K+G +++ +M + GF+P+ +T ++ ++ A + + M GL
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 464 P 464
P
Sbjct: 705 P 705
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 166/410 (40%), Gaps = 9/410 (2%)
Query: 152 HVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQ-LLFD--E 208
HVT +K D L +F +++ + + Y + + L F+ ++ +L D E
Sbjct: 9 HVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE 68
Query: 209 MVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLN 268
VG+ GV + ++ + K++ + F+++ C+ +YN+++++ ++
Sbjct: 69 NVGNHMLEGVYV-----GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
G +A ++Y M D ++ + + + K+ R AA +L M +G +
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
+ ++V + ++ +M G + + L+ K G ++ +L D++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
G PN Y L I+ + G+LD A+ + + G P TY L+ + +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVL 507
A M N GL P TY L+ +V +A +I+ + G+ D T ++
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 508 MVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
EG + AL GI+ N + L + G+ A L
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 124/313 (39%), Gaps = 1/313 (0%)
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
KG +A ++E M+ C +Y ++ L SG D A K++ M+ RG P +
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS 148
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
F + S K R +A+++ M G Y +++ + + L+ +M
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+G + + ++ K G + + K G LP TY ++ G++D
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
A+++ + G +P + TY L+ L A L +M G D + L+
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 509 V-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAK 567
Y K G V LA R + +G + F R L + G A L + K
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 568 VDLILYTSILAHL 580
++ILY +++ L
Sbjct: 389 PNVILYNTLIKGL 401
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 142/351 (40%), Gaps = 12/351 (3%)
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM-----EKTSCLLDSSTYELMIPNLA 302
++ G K TY S+I K Y FE E + E + Y + N
Sbjct: 32 KEVGFKHTLSTYRSVI----EKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG 87
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
+ G++ A +F+ M P + + +++ + +G D A KV+M MR G P
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
+ ++S+ K+ + ALRL + M G N Y V+ + F M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
+G ST+ LL + G + KL + + G+ P L TY + + L + +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 483 DVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
D A +++ + G DV T ++++ K A +L M + G+ +++ L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 542 FESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHL 592
K G+ + A+ ++ V + D Y S++ L C E + R L
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL--CHEGETNRAL 376
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D T+N LI + + A EI + M D TY ++ L K+ + + + +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+ M +G P L F L++S+ + +LD A+ + EM+ P + +LI+ + K+
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 375 GKLETALRLWDEM----KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
G L+ A L+ +M K++ P Y ++I + + + +A F +M P
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY +++ +G ++ K M G P L+T ++ L + V AA I+
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 491 EMKAMG 496
M G
Sbjct: 697 RMVQKG 702
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
+P+ + +L + L R R D L +EM S N V +I K L+
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA---VTFGTLIDGFCKNGDLDG 584
Query: 240 SFCCFKKIQDA-GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
++ F+K+++A T TYN +I F K A ++++ M D TY LM+
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
K+G ++ +K EM GF P L +++ + R+ A + M G
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 359 P 359
P
Sbjct: 705 P 705
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 204/465 (43%), Gaps = 11/465 (2%)
Query: 111 VKKPFMNALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDG-DAGLSL 169
VKKP + V + K+ ++ +L K V + V Q L+ ++G +
Sbjct: 95 VKKPVEDIDKVCDFLN--KKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGF 152
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQ 229
F WA Q+ Y S Y + D L + R+FD + L +EM + S + L ++V++
Sbjct: 153 FIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMR 211
Query: 230 YLAKAEKLEVSFCCFKKIQDA-GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCL 288
LAK+ K + F +++ + G K DT NSL+ + + A E++ + T
Sbjct: 212 RLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IK 270
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
D+ T+ ++I K+ + D A + MK F P + + S V++ K G ++
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
EMR G P Y ++ S KS ++ AL ++++MK G P+ Y+ +I +K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN---AGLRPG 465
+G+ A F DM G Y ++ + + A++L M + P
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLR 524
+ TY LL + +KK + + +L M S+DV+ +L+ + G V+ A +
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 525 FMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD 569
G+ + + L + K + E AK +++ V S +D
Sbjct: 511 EAVRKGMVPRDSTCKMLVDELEKKNMAE-AKLKIQSLVQSKTMID 554
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 172/373 (46%), Gaps = 22/373 (5%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNR 226
+ W + Q+W++ S+ ++ML + +F+G + + + +G + N +++
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPN-----VISYTA 186
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM--EK 284
+++ + K + F+++Q +G + TY ++ F+ +A E++E++ EK
Sbjct: 187 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 246
Query: 285 TSCLL-DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
S L D Y +MI K+G + A K+F M G+G + SL M
Sbjct: 247 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYK 303
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
K++ +M+ +P Y LI++Y ++ + E AL +++EM AG RP Y +++
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
++ A SG ++ A + F M + P +Y +L + + ++ A K + + G
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS-----VDL 518
P + TY L+ A V+ ++ +M+ G + A+ ++ I + S
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG----IKANQTILTTIMDASGRCKNFGS 479
Query: 519 ALRWLRFMGSSGI 531
AL W + M S G+
Sbjct: 480 ALGWYKEMESCGV 492
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 9/352 (2%)
Query: 141 LDKLQFVPNMTHVTQALKVVNDG---DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR 197
L K+ PN+ T ++ G + ++FR + S PS Y ++
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR-RMQSSGPEPSAITYQIILKTFVEGD 230
Query: 198 DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
F + +F+ ++ + + + +I KA E + F + G T
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 258 TYNSLITLFLNKGLPYKAF-EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
TYNSL++ + YK +IY+ M+++ D +Y L+I ++ R + A +F+E
Sbjct: 291 TYNSLMSFETS----YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 346
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
M G RP + L+D+ +G ++ A V MR P Y +++ +YV +
Sbjct: 347 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 406
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+E A + + +K+ G+ PN Y +I+ +AK+ ++ M + M +G +
Sbjct: 407 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 466
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
+++ A+ Y M + G+ P VLL+L + + ++ A ++
Sbjct: 467 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
F L+ + GK G + A +V + G P Y +L+ESY + GK A ++ M+
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFS---DMEKAGFLPTPSTYACLLEMHAASG 445
+G P+ Y +++++ + K A F D +K+ P Y ++ M+ +G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 446 QIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD 505
+ A K+++SM G+ TY L++ + K V +KI +M+ DV +
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYA 325
Query: 506 VLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNS 564
+L+ Y + + AL M +G+R + L ++ SG+ E AK + ++
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 565 AAKVDLILYTSILAHLVRCQE 585
DL YT++L+ V +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASD 406
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 25/437 (5%)
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQ 229
F R+S ++ + + L +G + FD + DEM+ N+G+ + +
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML----NAGIYPTTSTYNI-- 348
Query: 230 YLAKAEKLEVSFCCFKKIQDAG------CKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
Y+ + C F +I DA D +YN+L+ ++ G +A +++ +
Sbjct: 349 YIC-------ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
TY +I L +SG L+ A +L +EM + P + + +LV K G L
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR-PNFALYTLV 402
A +V+ EM G +P Y + ++ G + A RL +EM + P+ +Y +
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I+ K G L A+ + + G +P TY ++ + +GQ A LY+ M L
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALR 521
P + TY VL+ A ++ A + EMK G +V + L+ + K G++D A R
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
+L M GI N + L +E L + ++ + D + ++ HL
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Query: 582 RCQEEKN----ERHLMS 594
+ E + ER L+S
Sbjct: 702 KDHESREVEFLERLLLS 718
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
F++M +GF P + ++ + + ++ A V+ M G P + ++++S K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
+G LE ++W EMK + Y ++I +K+GK++ A DM ++GF TP +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
+ L+E + G D A + + M NAG+ P STY + + L + +D A ++L M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 494 AMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
A DV + + LM YIK G A + + I + L + +SG E
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 553 SAKPLLETYVNSAAKVDLILYTSILAHLVR 582
A+ L E D+I YT+++ V+
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 166/389 (42%), Gaps = 24/389 (6%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGL-------------NRSRDFDGVQLLFDEMV 210
+ F W +RQS S + + + L RS D G+ + D ++
Sbjct: 100 EIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDL-GMHEIDDLLI 158
Query: 211 GDSANSGVSLLVACNRVIQYLAK--AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLN 268
S + ++L + + Y K AEK +SF +K+ G N ++ + +
Sbjct: 159 DGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSF---EKMIRKGFLPSVRNCNIVLKVLRD 215
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
+ KA +YE+M + + T+ M+ + K+G L+ K++ EMK R
Sbjct: 216 SRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
+ L++ K G+++ A + H +MR G+ P + LIE Y K G + A + DEM
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
AG P + Y + I + G++D A S M P +Y L+ + G+
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFV 391
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVL 507
A L++ + + P + TY L+ L ++ A ++ EM DV T + ++
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 508 MVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
++K G++ +A M GI+ + +
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+F M + GFLP+ +L++ S ++ A +Y +M G+ P + T+ +L
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 478 NKKLVDVAAKILLEMKAMGYSV-DVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
++ KI LEMK +VT + ++ + K G ++ A R+ M SG +
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
L E K GL++ A + + +N+ Y + L + R L+S +
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 597 GA 598
A
Sbjct: 370 AA 371
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 153/354 (43%), Gaps = 13/354 (3%)
Query: 241 FCCFKKIQDA----------GCKIDTETYNSLI-TLFLNKGLPYKAFEIYESMEKTSCLL 289
+C K+I DA G K DT T+ +LI LFL+ +A + + M + C
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQP 221
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY ++ L K G +D A L +M+ + + IF +++DS+ K ++ A+ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
EM G RP Y SLI G+ A RL M PN + +I++ K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GKL A +M + P TY L+ ++D A +++ M + P + TY
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGS 528
L+ K V+ ++ EM G + VT + ++ + + G D A + M S
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + T+ L G ++A + + S ++++ +Y +++ + +
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 2/353 (0%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I + +L ++ K+ G + D T +SL+ + + A + + M +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
D+ T+ +I L + A L +M RG +P L + ++V+ + K G +D A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
+ +M + I+ ++I+S K +E A+ L+ EM+ G RPN Y +I
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLS 467
G+ A S+M + P T+ L++ G++ A KL+ M + P
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 468 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFM 526
TY +L+ +D A ++ M + ++ + L+ + K V+ + R M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 527 GSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
G+ N + + ++G +SA+ + + V++ D++ Y SIL H
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY-SILLH 476
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 153/356 (42%), Gaps = 41/356 (11%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
Q P Y + +GL + D D L ++M + V + N +I L K
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF---NTIIDSLCKYR 272
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITL------------------------------ 265
+EV+ F +++ G + + TYNSLI
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 266 -----FLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR 320
F +G +A +++E M + S D+ TY L+I RLD A ++F+ M +
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETA 380
P + + +L++ K R++ +++ EM G Y ++I+ + ++G ++A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
++ +M + Y++++ GKLD A+ F ++K+ Y ++E
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+G++ A L+ S++ ++P + TY +++ L +K+L+ A + +MK G
Sbjct: 513 MCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 3/307 (0%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
E M+ D TY + I + +L A + +M G+ P + +SL++ +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
R+ A+ + +M GY+P + +LI K A+ L D+M G +P+ Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
V+ K G +D+A++ + ME A + +++ ++ A+ L+ M
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDL 518
G+RP + TY L+ L N A+++L M + +V + L+ + KEG +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFES-CMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
A + M I + L CM + L E AK + + V+ ++ Y +++
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE-AKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 578 AHLVRCQ 584
+C+
Sbjct: 406 NGFCKCK 412
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 1/304 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A +++ M K+ + ++ +AK + + L ++M+ G L ++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ +L A+ V +M GY P SL+ Y S ++ A+ L D+M GY+P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ +T +I K A++ M + G P TY ++ G ID A+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
N M A ++ + + ++ L + V+VA + EM+ G + VT + ++
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G A R L M I N L ++ K G A+ L E + + D I Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 574 TSIL 577
++
Sbjct: 367 NLLI 370
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 36/261 (13%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
DT TYN LI F +A ++++ M CL + TY +I K R++ +LF
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYV 372
+EM RG + +++ +AG DSA V +M R P I Y L+
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM--VSNRVPTDIMTYSILLHGLC 479
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK--------------------- 411
GKL+TAL ++ ++ + N +Y +IE K+GK
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 412 -----------LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
L A F M++ G LP TY L+ + + +L M ++
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 461 GLRPGLSTYTVLLTLLANKKL 481
G ST +++ +L + +L
Sbjct: 600 GFVGDASTISLVTNMLHDGRL 620
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
K+D A+ F DM K+ P+ + LL A + + + L M G+ L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSS 529
+ + + + +A +L +M +GY D VT S +L Y + A+ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
G + + F L A L++ V + DL+ Y +++ L + +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 590 RHLMSILGATKHKAH 604
+L++ + A + KA+
Sbjct: 243 LNLLNKMEAARIKAN 257
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 3/312 (0%)
Query: 274 KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
KA + E M + + D+S Y ++ L K G + A +L ++M+ G+ + +LV
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV 183
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+ G L+ +++ + G P Y L+E+ K + A++L DE+ + G
Sbjct: 184 RGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
PN Y +++ K G+ D AM+ F ++ GF +Y LL G+ + A L
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD---VLMVY 510
M P + TY +L+ LA + A ++L EM + VTA+ V+
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARL 363
Query: 511 IKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDL 570
KEG VDL ++ L M + N + C + + A ++++ N
Sbjct: 364 CKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTH 423
Query: 571 ILYTSILAHLVR 582
Y S++ L R
Sbjct: 424 DFYKSVITSLCR 435
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
L KA +L+ + + + +G D Y L+ +G A ++ E ME +
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
+ TY ++ L G L+ + + + + +G P ++ L+++ K D A+K+
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
E+ G P Y L+ + K G+ + A+ L+ E+ G++ N Y +++ G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT--NAGLRPGLST 468
+ + A S ++M+ P+ TY L+ A G+ + A+++ M+ N R ++
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 469 YTVLLTLLANKKLVDVAAKILLEM 492
Y ++ L + VD+ K L EM
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEM 379
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
PNL+ S F + + G +P + L+ + KA RL A++V M G
Sbjct: 85 PNLSDS------FSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 138
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P + Y L+ K G + A++L ++M+ GY N Y ++ G L+ ++
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
+ + G P TY+ LLE D A+KL + + G P L +Y VLLT
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 479 KKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ D A + E+ A G+ +V + ++L+
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILL 288
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 5/318 (1%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K++D G +T TYN+L+ G ++ + E + + ++ TY ++ K
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 224
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
D A KL E+ +G P L + L+ K GR D AM + E+ G++ Y
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
L+ G+ E A L EM P+ Y ++I S A G+ + A+ +M K
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Query: 425 AG--FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
F T ++Y ++ G++D +K + M +P TY + +L + V
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKV 404
Query: 483 DVAAKIL--LEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
A I+ L K + D S V+ ++G+ A + L M G +
Sbjct: 405 QEAFYIIQSLSNKQKCCTHDFYKS-VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 541 LFESCMKSGLYESAKPLL 558
L G++ A +L
Sbjct: 464 LIRGLCLEGMFTGAMEVL 481
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 15/280 (5%)
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
++ +L K+ RL A ++ + M G P + + LV+ + K G + AM++ +M G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
Y Y +L+ G L +L+ + + G PN Y+ ++E+ K D A+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
++ G P +Y LL G+ D AM L+ + G + + +Y +LL L
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIK-EGSVDLALRWLRFM--GSSGIRT 533
+ A +L EM + V ++L+ + G + AL+ L+ M G+ R
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 534 -----NNFIIR-------QLFESCMKSGLYESAKPLLETY 561
N I R L C+ +Y KP TY
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 142/356 (39%), Gaps = 41/356 (11%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
Q +P+ Y L + + R D L DE++ G LV+ N ++ K
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII---VKGGEPNLVSYNVLLTGFCKEG 260
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+ + + F+++ G K + +YN L+ G +A + M+ TY
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 296 LMIPNLAKSGRLDAAFKLFQEM-KG-RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
++I +LA GR + A ++ +EM KG FR + ++ + K G++D +K EM
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 354 GFGYRPPP-----------------------------------TIYVSLIESYVKSGKLE 378
+P Y S+I S + G
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA-GFLPTPSTYACL 437
A +L EM G+ P+ Y+ +I G AM S ME++ PT + +
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAM 500
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
+ + D AM+++ M P +TY +L+ +A++ +++A ++L E++
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 26/274 (9%)
Query: 130 RWKWGPELDTQLDKLQFVPNMT-------------HVTQALKVVNDGDAGLSLFRWAKRQ 176
RW+ L ++D P++ QAL+V+ + G FR
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA-- 353
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
+ Y+P + L + D V DEM+ A + ++ +K ++
Sbjct: 354 TSYNP-------VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+F + + + + Y S+IT KG + AF++ M + D+ TY
Sbjct: 407 ---AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 297 MIPNLAKSGRLDAAFKLFQEMK-GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I L G A ++ M+ +P ++ F +++ + K R D AM+V M
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKI 389
P T Y L+E +LE A + DE+++
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 220 LLVAC---NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
L V+C N +I K +++ + ++++ G + TY SL+ +A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
E+ + M+ LD Y +I K +++A LF E+ G P I+ SL+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
G + +A+ ++ +M G R Y +LI+ +K G L A L+ EM+ G P+
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
+YT+++ +K G+ + F +M+K P Y ++ H G +D A +L++
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 457 MTNAGLRPGLSTYTVLLT 474
M + G+ P +T+ +L++
Sbjct: 820 MLDKGILPDGATFDILVS 837
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN-SGVSLLVACNRV--IQYLAKAEKL 237
P++ Y +L DG R+ D + + M + +GV N + + +KA +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+ I++ + +YNS+I F +G A YE M + TY +
Sbjct: 571 LANM-----IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L K+ R+D A ++ EMK +G + + + +L+D K ++SA + E+ G
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P IY SLI + G + AL L+ +M G R + YT +I+ K G L +A
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+++M+ G +P Y ++ + GQ +K++ M + P + Y ++
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 478 NKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ +D A ++ EM G D D+L+
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 145/333 (43%), Gaps = 42/333 (12%)
Query: 205 LFDEMVGDSANSGVSLLVACNRVIQYLAKAEK---------------------------- 236
LFDE S +G++ + CN ++ +L K K
Sbjct: 431 LFDE----SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 237 -------LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
++++ F I + G K + TY+ LI A E+ M ++ +
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
+ Y+ +I L K G+ A +L M + + + S++D K G +DSA+
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+ EM G G P Y SL+ K+ +++ AL + DEMK G + + Y +I+ K
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
++ A + FS++ + G P+ Y L+ G + A+ LY M GLR L T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 469 YTVLLT-LLANKKLVDVAAKILLEMKAMGYSVD 500
YT L+ LL + L+ +A+++ EM+A+G D
Sbjct: 727 YTTLIDGLLKDGNLI-LASELYTEMQAVGLVPD 758
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 174/372 (46%), Gaps = 3/372 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
NR + L + L + + ++ G D T L+ L + P +A E+ +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF-RPGLNIFASLVDSMGKAGRLD 343
DS Y L + K+ L A L +EMK + P + S++ + K G +D
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+++ EM G SLI + K+ L +AL L+D+M+ G PN ++++I
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
E K+G+++ A+ + ME G P+ +++ + + A+KL++ GL
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRW 522
T+L + L + D A ++L +M++ G +V + ++V++ + ++ ++DLA
Sbjct: 442 NVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ G++ NN+ L + C ++ ++A ++ +S +V+ ++Y +I+ L +
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 583 CQEEKNERHLMS 594
+ R L++
Sbjct: 561 VGQTSKARELLA 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 183/452 (40%), Gaps = 41/452 (9%)
Query: 168 SLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNR 226
SL R K + PS + Y + + + D L DEM+ D G+S+ +VA
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSD----GISMNVVAATS 344
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME--- 283
+I K L + F K++ G ++ T++ LI F G KA E Y+ ME
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 284 ---------------------KTSCLLDSSTYELMIPN----------LAKSGRLDAAFK 312
+ + L ++E + N L K G+ D A +
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
L +M+ RG P + + +++ + +D A V + G +P Y LI+
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTP 431
++ + AL + + M + N +Y +I K G+ A ++M E+ +
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+Y +++ G++D A+ Y M G+ P + TYT L+ L +D A ++ E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 492 MKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
MK G +D+ A L+ + K +++ A + G+ + I L G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 551 YESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+A L + + + DL YT+++ L++
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L DG + + + LF E++ + N + N +I + + +K
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY---NSLISGFRNLGNMVAALDLYK 713
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
K+ G + D TY +LI L G A E+Y M+ + D Y +++ L+K G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ K+F+EMK P + I+ +++ + G LD A ++H EM G P +
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 366 SLIESYV 372
L+ V
Sbjct: 834 ILVSGQV 840
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 175/408 (42%), Gaps = 37/408 (9%)
Query: 200 DGVQLLFDEMVGDSANSGVSLLV-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTET 258
D V L++ +M+ GVS V A N +I K +L + + + IDT T
Sbjct: 111 DQVSLIYSKMIA----CGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVT 163
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG------------- 305
YN++I+ GL +A++ M K L D+ +Y +I K G
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 306 ---------------RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
L A + +++M GF P + F+S+++ + K G++ +
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
EM P Y +L++S K+ AL L+ +M + G + +YT++++ K+G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
L A F + + +P TY L++ +G + A + M + P + TY+
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSS 529
++ K +++ A +L +M+ + T V+ K G ++A+ + M
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
G+ NN+I+ L + G + K L++ V+ +D I YTS++
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+ K++ G K + N ++ + G +A I M + +TY + + +K
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
R DA FK + + G + ++ +L+ ++ K G A V +M G+ P
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ SL+ Y + AL + M AG PN A Y +I + +G + S+M+
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
G P TY L+ A G + +M +Y M GL P STY VL++ AN +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 484 VAAKILLEMKAMGYS 498
A ++L EM G S
Sbjct: 836 QARELLKEMGKRGVS 850
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 16/314 (5%)
Query: 172 WA---KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVS-LLVACNRV 227
WA R+ P + ++ + + D +G+ L+D+M + G+ L++CN V
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM----KSCGIKPSLMSCNIV 614
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYK----AFEIYESME 283
+ L + K+E + ++ + TY +FL+ +K F+ +E++
Sbjct: 615 VGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR----IFLDTSSKHKRADAIFKTHETLL 670
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
L Y +I L K G A + +M+ RGF P F SL+ +
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A+ + M G P Y ++I +G ++ + EMK G RP+ Y +I
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
AK G + +M+ + +M G +P STY L+ A G++ A +L M G+
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Query: 464 PGLSTYTVLLTLLA 477
P STY +++ L
Sbjct: 851 PNTSTYCTMISGLC 864
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 50/564 (8%)
Query: 9 STTTNLCKLTHYLS-RAYSFVSPTPFCPKLTFLASTTRFTSSWRIPGLSNDTNFMRCYCN 67
+ + LC+ H L+ AY F+S K+ L T + + I G NF+R
Sbjct: 166 TVISGLCE--HGLADEAYQFLSEMV---KMGILPDTVSYNT--LIDGFCKVGNFVR---- 214
Query: 68 NGSGSKEFTEEIEYLDESGSVIYKGK--GVRSVEPGLDDHVMVG---DVK--KPFMNALA 120
+K +EI L+ I + ++E D VM G DV +N L
Sbjct: 215 ----AKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLC 270
Query: 121 VA-KIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWY 179
K++E G L +++++ PN HVT V D +++R A + Y
Sbjct: 271 KGGKVLE-------GGLLLREMEEMSVYPN--HVTYTTLV--DSLFKANIYRHA--LALY 317
Query: 180 S-------PSD-DCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYL 231
S P D Y +L DGL ++ D + F ++ D+ V +V ++ L
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ---VPNVVTYTALVDGL 374
Query: 232 AKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS 291
KA L + ++ + + TY+S+I ++ KG+ +A + ME + + +
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
TY +I L K+G+ + A +L +EM+ G I +LV+ + + GR+ + +
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
M G Y SLI+ + K G E AL +EM+ G + Y ++I K GK
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV 471
+ A A+ M + G P +T+ ++ G + +KL++ M + G++P L + +
Sbjct: 555 VG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSG 530
++ +L ++ A IL +M M ++T + + K D + + S G
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 531 IRTNNFIIRQLFESCMKSGLYESA 554
I+ + + L + K G+ + A
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKA 697
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 171/402 (42%), Gaps = 47/402 (11%)
Query: 139 TQLDKLQFVPNM-THVTQALKVVNDG--DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNR 195
TQ+ + +PN+ T+ + V G + +SL R + Q+ P+ Y + DGL +
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN-VVPNGFTYGTVIDGLFK 446
Query: 196 SRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCK 253
+ + L EM +G N+ + + ++ +L + +++ K + G
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYI-----LDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
+D Y SLI +F G A E M++ D +Y ++I + K G++ A +
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA- 560
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
++ M+ +G P + F +++S K G + +K+ +M+ G +P ++ +
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI------------------- 414
+GK+E A+ + ++M + PN Y + +++ +K + D
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 415 ----------------AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
A DME GF+P T+ L+ + + A+ Y+ M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
AG+ P ++TY ++ L++ L+ K L EMK+ G D
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 146/317 (46%), Gaps = 6/317 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V+ N +I + K K+ + +K +++ G + D T+N ++ +G ++++
Sbjct: 539 VVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 281 SMEKTSCLLDSS--TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
M+ SC + S + +++ L ++G+++ A + +M P L + +D+ K
Sbjct: 598 KMK--SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
R D+ K H + +G + +Y +LI + K G + A + +M+ G+ P+
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+ ++ + + A+S +S M +AG P +TY ++ + +G I K + M
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVD 517
+ G+RP TY L++ A + + I EM A G + +VL+ + G +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 518 LALRWLRFMGSSGIRTN 534
A L+ MG G+ N
Sbjct: 836 QARELLKEMGKRGVSPN 852
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
DT T+NSL+ + KA Y M + + +TY +I L+ +G + K
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
EMK RG RP + +L+ K G + +M ++ EM G P + Y LI +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
GK+ A L EM G PN + Y +I K
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 12/279 (4%)
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL-DSAMKVHMEMRGFGYRPPPTIY 364
RL A + M G P ++ SL+ G + D ++ +M G P
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
LI S+ K G+L A+ L I+ + Y VI + G D A S+M K
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
G LP +Y L++ G A L + ++ L T+T+LL+ N ++
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEE 245
Query: 485 AAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
A + +M G+ DV T S ++ K G V LR M + N+ L +
Sbjct: 246 AYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 544 SCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
S K+ +Y A L V VDL++YT ++ L +
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 5/303 (1%)
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRL 307
++ C ++ +Y+ LI G +AF + + M + C + TY ++I L G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 308 DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSL 367
D AF LF EM RG +P ++ + L+D + + G+++ A V +M P Y +L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
I Y K G++ A L M+ +PN + ++E + GK A+ M G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
P +Y L++ G ++ A KL +SM + P T+T ++ + DVA+
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 488 ILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN----NFIIRQLF 542
L M G S+D VT + ++ K G AL L + I T N I+ L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 543 ESC 545
+ C
Sbjct: 558 KGC 560
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 175/409 (42%), Gaps = 10/409 (2%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE-V 239
PS Y +L L D LFDEM+ V +I L + K+E
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV---LIDGLCRDGKIEEA 355
Query: 240 SFCCFKKIQDAGCKI--DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+ C K ++D +I TYN+LI + G AFE+ MEK +C + T+ +
Sbjct: 356 NGVCRKMVKD---RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L + G+ A L + M G P + + L+D + + G +++A K+ M F
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P + ++I ++ K GK + A M G + T +I+ K GK A+
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+ K L TP + +L+M + ++ + + + GL P + TYT L+ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 478 NKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE-GSVDLALRWLRFMGSSGIRTNNF 536
+ + +IL MK G +V +++ + + G V+ A + L M SG+ N+
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
+ + + +G + A + V +++ +Y+S+L V Q+
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/521 (20%), Positives = 214/521 (41%), Gaps = 62/521 (11%)
Query: 117 NALAVAKIVEVVKRWKWGPELDTQLDKL--QFVPNMTHVTQALKVVNDGDAGLSLFRWAK 174
+ +A + ++K W E ++ L L PN+ +L+ +D D + F W
Sbjct: 38 DEVAAHDVASLLKTPNW--EKNSSLKSLVSHMNPNVASQVISLQR-SDNDICVRFFMWVC 94
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSG-VSLLVACNRVIQYLAK 233
+ S Y FD +++ ++L+ + A++ V+L+ C+R +
Sbjct: 95 KHSSYC---------FDPTQKNQ---LLKLIVSSGLYRVAHAVIVALIKECSR-----CE 137
Query: 234 AEKLEVSFCCFKKIQDA-GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS 292
E L++ +C F ++++ G +++ Y+SL+ L + A+ Y ME ++
Sbjct: 138 KEMLKLMYC-FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEM--------------------KGRGFRPGLNIF--- 329
Y ++ L K+G +AA ++ +G R L +F
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM 256
Query: 330 -------------ASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
+ L+ + + GRL+ A + +M G +P Y LI++ G
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
++ A L+DEM G +PN YT++I+ + GK++ A M K P+ TY
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
L+ + G++ A +L M +P + T+ L+ L A +L M G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 497 YSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
S D+ + +VL+ + +EG ++ A + L M I + + + K G + A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 556 PLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSIL 596
L + +D + T+++ + + + ++ ++ L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 138/314 (43%), Gaps = 12/314 (3%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLI-TLFLNKGLPYKAFEIYESMEKT 285
V+ L + +L ++F +K +++ G + N LI L N G +I+ M K
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
C DS TY +I L + GR+D A KLF EM + P + + SL++ + + +D A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
M+ EM+ G P Y SL++ K G+ A+ L++ M G RPN YT +I
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
K K+ A+ M G P Y ++ A + A + M G+ P
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 466 LSTYT--------VLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSV 516
T+ V+ L AN A + L M++ G SV+V T ++ K+G
Sbjct: 367 RLTWNIHVKTSNEVVRGLCANYP--SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 517 DLALRWLRFMGSSG 530
A++ + + + G
Sbjct: 425 QKAVQLVDEIVTDG 438
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D S++ M+ L + + AA L MK +I S+ G+ R +++V
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+M+ F P YV+++ V+ +L A + + M+ G P A ++I++ ++
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 410 -GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
G +D + F +M K G P TY L+ G+ID A KL+ M P + T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGS 528
YT L+ L K +VD A+R+L M S
Sbjct: 230 YTSLINGLCGSK----------------------------------NVDEAMRYLEEMKS 255
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
GI N F L + K G A L E + + +++ YT+++ L C+E+K
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL--CKEQK 312
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 3/253 (1%)
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
+ ++F +MK P + +++ + + +L+ A K + MR G P LI+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 370 SYVKS-GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
+ ++ G ++ L+++ EM G P+ Y +I + G++D A F++M +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
PT TY L+ S +D AM+ M + G+ P + TY+ L+ L A ++
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 489 LLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES-CM 546
M A G + VT + ++ KE + A+ L M G++ + + ++ C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 547 KSGLYESAKPLLE 559
S E+A L E
Sbjct: 345 ISKFREAANFLDE 357
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 159/374 (42%), Gaps = 38/374 (10%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TYN+L+ + G +AF+I E M++T+ L D TY ++I L +G + +L M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG----------------------- 354
K +P + + +L+D + G A K+ +M
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 355 -------------FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
G+ P Y +LI++Y+K G L AL + EM G + N
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
++++ K KLD A + + K GF+ TY L+ +++ A+++++ M
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY-SVDVTASDVLMVYIKEGSVDLAL 520
+ P +ST+ L+ L + ++A + E+ G D T + +++ Y KEG V+ A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ + +N+ L K G+ E A T + +VD + Y ++++
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAF 635
Query: 581 VRCQEEKNERHLMS 594
+ ++ K L+S
Sbjct: 636 CKDKKLKEAYDLLS 649
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 5/321 (1%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR-GFRPGLNIFASLV 333
A E+++ M K L+ T+ +++ G+L+ A + + M P + +++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+M K GRL ++ ++M+ G P Y +L+ Y K G L+ A ++ + MK
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
P+ Y ++I +G + + M+ P TY L++ G A KL
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM-GYSVD-VTASDVLMVYI 511
M N G++ T+ + L L ++ + + + E+ M G+S D VT ++ Y+
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
K G + AL +R MG GI+ N + + ++ K + A LL + VD +
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 572 LYTSILAHLVRCQEEKNERHL 592
Y +++ R EEK E+ L
Sbjct: 488 TYGTLIMGFFR--EEKVEKAL 506
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 116/272 (42%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY +I K G L A ++ +EM +G + +++D++ K +LD A +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
G+ Y +LI + + K+E AL +WDEMK P + + +I
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GK ++AM F ++ ++G LP ST+ ++ + G+++ A + YN +P T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSS 529
+LL L + + + A + VT + ++ + K+ + A L M
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETY 561
G+ + F M+ G LL+ +
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 117/256 (45%), Gaps = 1/256 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V + +I+ K L + +++ G K++T T N+++ + +A +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
S K ++D TY +I + +++ A +++ EMK P ++ F SL+ + G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ + AM+ E+ G P + + S+I Y K G++E A ++E ++P+
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+++ K G + A++ F+ + + + T TY ++ ++ A L + M
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 461 GLRPGLSTYTVLLTLL 476
GL P TY ++LL
Sbjct: 655 GLEPDRFTYNSFISLL 670
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 44/273 (16%)
Query: 359 PPPT--IYVSLIESYVKSGKLETALRLWDEMKIAGYRPN-FALYTLVIE--SHAKSGKLD 413
PPP+ ++ + +Y+ GK AL+++ +M +PN TL+I + S +
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVL 472
A F DM K G T+ L+ + G+++ A+ + M + + P TY +
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
L ++ K + ++LL+MK G + VT ++++ Y K GS+ A + + M + +
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 532 R----TNNFII-------------------------------RQLFESCMKSGLYESAKP 556
T N +I L + C + GL A+
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 557 LLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
L+E N K + + + L L C+EEK E
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWL--CKEEKRE 397
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 133/300 (44%), Gaps = 1/300 (0%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC+ D TY +++ +G A + ME + Y +I +L K D A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF EM+ +G RP + ++SL+ + GR A ++ +M P + +LI++
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+VK GKL A +L++EM PN Y+ +I +L A M + LP
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
TY L+ + ++D M+L+ M+ GL TYT L+ + D A +
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 491 EMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+M ++G ++ ++L+ + K G + A+ ++ S + + + + E K+G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 1/338 (0%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
K+ G + D T NSL+ F + A + + M + D+ T+ +I L
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A L M RG +P L + ++V+ + K G D A+ + +M IY
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
++I+S K + AL L+ EM+ G RPN Y+ +I G+ A SDM +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
P T++ L++ G++ A KLY M + P + TY+ L+ + A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 486 AKIL-LEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
++L L ++ VT + ++ + K VD + R M G+ N L
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
++ ++A+ + + V+ +++ Y +L L +
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
++ ++++ +AK K ++ +K++ G + TYN LI F A +
Sbjct: 78 IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLG 137
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K D T ++ R+ A L +M G++P F +L+ +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ A+ + M G +P Y +++ K G + AL L ++M+ A N +Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
VI+S K D A++ F++ME G P TY+ L+ G+ A +L + M
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+ P L T++ L+ K + A K+ EM
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 4/301 (1%)
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
++ +AK + D ++M+ G L + L++ + RL A+ + +M G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
Y P SL+ + ++ A+ L D+M GY+P+ +T +I K A+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ M + G P TY ++ G D A+ L N M A + + Y+ ++ L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
+ D A + EM+ G +V T S ++ G A R L M I N
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL---AHLVRCQEEKNERHL 592
L ++ +K G A+ L E + + ++ Y+S++ L R E K L
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 593 M 593
M
Sbjct: 384 M 384
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 358 RPPPTI--YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
RP P+I + L+ + K K + + ++M+I G N Y ++I + +L +A
Sbjct: 73 RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLA 132
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
++ M K G+ P T LL +I A+ L + M G +P T+T L+
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 476 LANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
L A ++ M G D VT V+ K G DLAL L M ++ I N
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
I + +S K + A L N + ++I Y+S+++ L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 164/369 (44%), Gaps = 6/369 (1%)
Query: 166 GLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
F WA + ++ Y + L ++R F+ + + +EM G+ +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFT 233
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++ A A++ + + F+ ++ KI ET N L+ L +A +++ + K
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KE 292
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+ TY +++ + L A +++ +M +G +P + +++ + ++ + A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+K+ M+ G P Y +I + K +ETA+ +D+M +G +P+ A+YT +I
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
KLD +M++ G P TY L+++ A +HA ++YN M + P
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLR 524
+ T+ +++ + ++ + EM G D + VL+ I EG A R+L
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Query: 525 FMGSSGIRT 533
M G++T
Sbjct: 533 EMLDKGMKT 541
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR--VIQYLAKAEKLEVSFCCFKK 246
L D L R++ Q+LFD++ + ++ V N ++ L +A ++ +
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI------WND 323
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ D G K D +N ++ L A +++ M+ + +Y +MI + K
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A + F +M G +P ++ L+ G +LD+ ++ EM+ G+ P Y +
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ E A R++++M P+ + ++++S+ + ++ + + +M K G
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
P ++Y L+ G+ A + M + G++ L Y
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 114/307 (37%), Gaps = 31/307 (10%)
Query: 124 IVEVVKRWKWGPELDTQLDKLQ--FVPNMTHVT-------------QALKVVNDG-DAGL 167
+++ + R K G E DKL+ F PNM T +A ++ ND D GL
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL 329
Query: 168 SLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRV 227
P + ++ +GL RSR LF M V +
Sbjct: 330 K------------PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI---M 374
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I+ K +E + F + D+G + D Y LIT F + +E+ + M++
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
D TY +I +A + A +++ +M P ++ F ++ S A +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
V EM G P Y LI + GK A R +EM G + Y
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 554
Query: 408 KSGKLDI 414
+ G+ +I
Sbjct: 555 RGGQPEI 561
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 3/255 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLF-LNKGLPYKAFEIY 279
L + N ++ L K++++E ++ F+ ++ +DT TYN ++ + L K P KA E+
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTP-KALEVL 218
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
+ M + + +TY M+ ++G++ A++ F EMK R + + ++V G A
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G + A V EM G P Y ++I+ K +E A+ +++EM GY PN Y
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
++I +G+ ME G P TY ++ ++ +++ A+ L+ M +
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 460 AGLRPGLSTYTVLLT 474
P L TY +L++
Sbjct: 399 GDCLPNLDTYNILIS 413
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 155/322 (48%), Gaps = 11/322 (3%)
Query: 257 ETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
+T+ + + + G P KA +++ +M + C D +++ ++ L KS R++ A++LF+
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 186
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK 376
++GR F + +++ R A++V EM G P T Y ++++ + ++G+
Sbjct: 187 LRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+ A + EMK + YT V+ +G++ A + F +M + G LP+ +TY
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
++++ +++A+ ++ M G P ++TY VL+ L + +++ M+ G
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Query: 497 YSVDVTASDVLMVYIKEGS-VDLALRWLRFMGSS----GIRTNNFIIRQLF-----ESCM 546
+ ++++ Y E S V+ AL MGS + T N +I +F E +
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Query: 547 KSGLYESAKPLLETYVNSAAKV 568
+G AK +L S +++
Sbjct: 426 VAGNQAFAKEILRLQSKSGSRL 447
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 146/316 (46%), Gaps = 11/316 (3%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
V + A A K + + F + + GC D ++N+++ + KA+E++ ++ +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGR 190
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+D+ TY +++ R A ++ +EM RG P L + +++ +AG++ A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ +EM+ Y +++ + +G+++ A ++DEM G P+ A Y +I+
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K ++ A+ F +M + G+ P +TY L+ +G+ +L M N G P
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM--VYIKEGSVDL------ 518
TY +++ + V+ A + +M + ++ ++L+ +++++ S D+
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQ 430
Query: 519 --ALRWLRFMGSSGIR 532
A LR SG R
Sbjct: 431 AFAKEILRLQSKSGSR 446
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 23/221 (10%)
Query: 127 VVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAK-RQSWY----SP 181
++KR E+ ++ + PN+T LK FR + R +W
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLK---------GFFRAGQIRHAWEFFLEMK 257
Query: 182 SDDC------YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
DC Y + G + + + +FDEM+ + V+ N +IQ L K +
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY---NAMIQVLCKKD 314
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+E + F+++ G + + TYN LI + G + E+ + ME C + TY
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYN 374
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
+MI ++ ++ A LF++M P L+ + L+ M
Sbjct: 375 MMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 11/263 (4%)
Query: 342 LDSAMKVHME---------MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY 392
+D A ++H+ MR P P + + E Y +GK + A++L+ M G
Sbjct: 98 IDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGC 157
Query: 393 RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
+ A + +++ KS +++ A F + + F TY +L + A++
Sbjct: 158 FQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALE 216
Query: 453 LYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYI 511
+ M G+ P L+TY +L + A + LEMK +D VT + V+ +
Sbjct: 217 VLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG 276
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
G + A M G+ + + + K E+A + E V + ++
Sbjct: 277 VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 572 LYTSILAHLVRCQEEKNERHLMS 594
Y ++ L E LM
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQ 359
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 10/343 (2%)
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
R I L K + ++ + ++ +N+L++ + ++ M++
Sbjct: 264 RFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI------FASLVDSMGKA 339
D T ++I L KS R+D A ++F++M+G+ G I F +L+D + K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 340 GRLDSAMKVHMEMRGFGYR--PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
GRL A ++ + M+ R P Y LI+ Y ++GKLETA + MK +PN
Sbjct: 384 GRLKEAEELLVRMK-LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
++ + L++A+ F DMEK G TY L+ + ++ AM Y M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSV 516
AG P Y L++ L + A +++ ++K G+S+D+ A ++L+ ++ + +
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ L M G + ++ L K +ES + ++E
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 4/313 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y L DG R+ + + + M D V V N ++ + + L ++
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV---VTVNTIVGGMCRHHGLNMA 460
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++ G K + TY +LI + KA YE M + C D+ Y +I
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L + R A ++ +++K GF L + L+ + ++ +M G +P
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y +LI + K E+ R+ ++M+ G P Y VI+++ G+LD A+ F
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 421 DME-KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
DM + P Y L+ + G A+ L M +RP + TY L L K
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 480 KLVDVAAKILLEM 492
+ K++ EM
Sbjct: 701 TQGETLLKLMDEM 713
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 161/372 (43%), Gaps = 13/372 (3%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQ----DAG--CKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+I L K+ +++ + F++++ D G K D+ +N+LI G +A E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 281 SME-KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
M+ + C+ ++ TY +I ++G+L+ A ++ MK +P + ++V M +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
L+ A+ M+M G + Y++LI + +E A+ +++M AG P+ +Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I + + A+ +++ GF Y L+ + + ++ M
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDL 518
G +P TY L++ K + +++ +M+ G VT V+ Y G +D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 519 ALRWLRFMG-SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
AL+ + MG S + N I L + K G + A L E + ++ Y +
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA-- 692
Query: 578 AHLVRCQEEKNE 589
L +C EK +
Sbjct: 693 --LFKCLNEKTQ 702
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
K D +++ G A ++ M + + TY MI + SGR A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
L + M + P + F++L+++ K ++ A +++ EM + P Y S+I+ +
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K +++ A R+ D M G P+ ++ +I + K+ ++D M F +M + G +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY L+ G +D A L N M + G+ P T+ +L L +KK + A IL ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 493 K 493
+
Sbjct: 247 Q 247
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D T+++LI F+ + +A EIY+ M + S + TY MI K R+D A ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
M +G P + F++L++ KA R+D+ M++ EM G Y +LI + +
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
G L+ A L +EM G P++ + ++ +L A + D++K+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%)
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
++ L K G A LF EM +G P + + ++DS +GR A ++ M
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + +LI ++VK K+ A ++ EM P Y +I+ K ++D A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
M G P T++ L+ + + ++D+ M+++ M G+ TYT L+
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 477 ANKKLVDVAAKILLEMKAMGYSVD 500
+D A +L EM + G + D
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPD 219
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F ++ + G + TYN +I F + G A ++ M + D T+ +I K
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
++ A ++++EM P + S++D K R+D A ++ M G P
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ +LI Y K+ +++ + ++ EM G N YT +I + G LD A ++M
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 424 KAGFLPTPSTYACLL 438
G P T+ C+L
Sbjct: 213 SCGVAPDYITFHCML 227
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 1/229 (0%)
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
+ I ++++ K G A L+ EM G PN Y +I+S SG+ A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
M + P T++ L+ ++ A ++Y M + P TY ++
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 478 NKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
+ VD A ++L M + G S D VT S ++ Y K VD + M GI N
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 537 IIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
L + G ++A+ LL ++ D I + +LA L +E
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 235
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 170/422 (40%), Gaps = 12/422 (2%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
+++F+W K Q Y +D Y M+ R D + LF EM S A
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDA--- 183
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I +A + + + A TYN+LI + G +A E+ + M
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
D T+ +++ + A F+ MKG RP F ++ + K G+ A+
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 347 KVHMEMRG--FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ MR RP + S++ Y G++E +++ M G +PN Y ++
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
++A G A+S D+++ G +P +Y CLL + S Q A +++ M +P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI----KEGSVDLAL 520
+ TY L+ + + A +I +M+ G +V + L+ K+ +VD L
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ S GI N S + + E A L ++ K D + +T +++
Sbjct: 484 SAAQ---SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 581 VR 582
R
Sbjct: 541 CR 542
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 181/417 (43%), Gaps = 18/417 (4%)
Query: 192 GLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK--KIQD 249
LNR + DGV + VG A +L I+ L++ +E+ FK KIQ
Sbjct: 87 ALNRWEEVDGV---LNSWVGRFARKNFPVL------IRELSRRGCIELCVNVFKWMKIQK 137
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
C + + YN +I L +A ++ M+K SC D+ TY+ +I ++G+
Sbjct: 138 NYCARN-DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRW 196
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
A L +M P + + +L+++ G +G A++V +M G P + ++
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM--EKAGF 427
+Y + AL ++ MK A RP+ + ++I +K G+ A+ F+ M ++A
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
P T+ ++ +++ G+I++ ++ +M GL+P + +Y L+ A + A
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 488 ILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
+L ++K G DV + L+ Y + A M + N L ++
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 547 KSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKA 603
+G A + K +++ ++LA C K + ++ ++L A + +
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA---CSRSKKKVNVDTVLSAAQSRG 490
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 4/349 (1%)
Query: 198 DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
+ + + +F+ MV + + V+ N ++ A + I+ G D
Sbjct: 335 EIENCRAVFEAMVAEGLKPNI---VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
+Y L+ + P KA E++ M K + TY +I +G L A ++F++M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ G +P + +L+ + ++ + + V + G Y S I SY+ + +L
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
E A+ L+ M+ + + +T++I + K A+S +ME T Y+ +
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
L ++ GQ+ A ++N M AG P + YT +L + A ++ LEM+A G
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Query: 498 SVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
D A LM + K G + M I + ++F +C
Sbjct: 632 EPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 136/300 (45%), Gaps = 7/300 (2%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQD--AGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I L+K + + F +++ A C+ D T+ S++ L+ KG ++E+M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ +Y ++ A G A + ++K G P + + L++S G++ +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A +V + MR +P Y +LI++Y +G L A+ ++ +M+ G +PN +
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ + ++S K + S + G + Y + + + +++ A+ LY SM +
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA---SDVLMVYIKEGSVDLA 519
+ T+T+L++ A L EM+ + S+ +T S VL Y K+G V A
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEA 584
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 126/345 (36%), Gaps = 81/345 (23%)
Query: 205 LFDEMVGDSANSGV----SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYN 260
+F +M D V +LL AC+R +K+ V Q G ++T YN
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSR------SKKKVNVD-TVLSAAQSRGINLNTAAYN 499
Query: 261 SLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN-------------------- 300
S I ++N KA +Y+SM K DS T+ ++I
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 301 ---------------LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+K G++ A +F +MK G P + + S++ + + + A
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK----------------- 388
++ +EM G P +L+ ++ K G+ L D M+
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSA 679
Query: 389 ----------------IAGYRPNFA--LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
+ Y P+ + L ++ KSGK++ M F + +G
Sbjct: 680 CNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGIN 739
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
TYA LLE A G +++ M+ AG++P Y +++
Sbjct: 740 LKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISF 784
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 158/324 (48%), Gaps = 8/324 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEVSFCCF 244
Y ++ + R D LF+EM+ + G++L +V N ++Q LAK + ++ + F
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITE----GLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++ + GC+ + TY+ L+ L + +G + + E ++ + Y ++ L+K
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR---YMTQGIYSYLVRTLSKL 385
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
G + A +LF +M + + + S+++S+ AG+ A+++ ++ G +Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
++ + K ++ L+++MK G P+ Y ++I S + G++D A++ F ++E+
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
+ P +Y L+ +G +D A + M GL P + TY+ L+ + V++
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 485 AAKILLEMKAMGYSVDVTASDVLM 508
A + EM G ++ ++L+
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILL 589
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
KI + G DT YN++ + +++E M+K D TY ++I + + G
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+D A +F+E++ +P + + SL++ +GK G +D A EM+ G P Y
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
+L+E + K+ ++E A L++EM + G +PN Y ++++ K+G+ A+ +S M++
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 426 GFLPTPSTYACLLEMHAAS 444
G P TY L + + S
Sbjct: 612 GLTPDSITYTVLERLQSVS 630
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
K + ++Y S++ G +A E+ + + + D+ Y + L K ++
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
LF++MK G P + + L+ S G+ G +D A+ + E+ +P Y SLI
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K+G ++ A + EM+ G P+ Y+ ++E K+ ++++A S F +M G P
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
TY LL+ +G+ A+ LY+ M GL P TYTVL
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 192/509 (37%), Gaps = 86/509 (16%)
Query: 154 TQALKVVNDGDAGLSLFRWAKRQSWYSPSD----DCYVMLFDGLNRSRDFDGVQLLFDEM 209
++ LK +N + F+ YS +D + +++ N FD V+ + D M
Sbjct: 103 SEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSM 162
Query: 210 VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNK 269
V + + +S + N +I + E L++ C + ++ K+++ TY L+ +L
Sbjct: 163 VKSNVHGNISTV---NILIGFFGNTEDLQM---CLRLVKKWDLKMNSFTYKCLLQAYLRS 216
Query: 270 GLPYKAFEIY--------------------------------ESMEKTSCLLDSSTYELM 297
KAF++Y E M+K C D TY +M
Sbjct: 217 RDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIM 276
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I + + G+ D A LF EM G + + +L+ + K +D A++V M G
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC 336
Query: 358 RP--------------------------------PPTIYVSLIESYVKSGKLETALRLWD 385
RP IY L+ + K G + A RL+
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFC 396
Query: 386 EM---KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
+M + G R + Y ++ES +GK A+ S + + G + Y +
Sbjct: 397 DMWSFPVKGERDS---YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALG 453
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVT 502
QI H L+ M G P + TY +L+ VD A I E++ D+
Sbjct: 454 KLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDII 513
Query: 503 ASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETY 561
+ + L+ + K G VD A + M G+ + L E K+ E A L E
Sbjct: 514 SYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 562 VNSAAKVDLILYTSILAHLVRCQEEKNER 590
+ + +++ Y +L L EKN R
Sbjct: 574 LVKGCQPNIVTYNILLDCL-----EKNGR 597
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N V L K +++ F+K++ G D TYN LI F G +A I+E +E+
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ C D +Y +I L K+G +D A F+EM+ +G P + +++L++ GK R++
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A + EM G +P Y L++ K+G+ A+ L+ +MK G P+ YT++
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Query: 405 ----SHAKS 409
SH KS
Sbjct: 626 LQSVSHGKS 634
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
SP Y +L R + D +F+E+ + ++ N +I L K ++
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDI---ISYNSLINCLGKNGDVDE 530
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ FK++Q+ G D TY++L+ F A+ ++E M C + TY +++
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRP 324
L K+GR A L+ +MK +G P
Sbjct: 591 CLEKNGRTAEAVDLYSKMKQQGLTP 615
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 160 VNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVS 219
V + D +++F +R P Y L + L ++ D D + F EM N V
Sbjct: 490 VGEVDEAINIFEELERSDC-KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV- 547
Query: 220 LLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY 279
V + +++ K E++E+++ F+++ GC+ + TYN L+ G +A ++Y
Sbjct: 548 --VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 280 ESMEKTSCLLDSSTYELM 297
M++ DS TY ++
Sbjct: 606 SKMKQQGLTPDSITYTVL 623
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 2/285 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCL-LDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
YN++I G KA E+ +++ K + ++Y +I K G D+A + ++EM
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G P + F SL++ K+ R+D A+++ EM+ + Y +LI+ + K +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+TA L+ E+ G PN ++Y +I GK+D A+ + M G TY +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
++ G I+ A LY+ + + G+ P + VL+ L+ K A+K+L EMK
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 498 SVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
+ +V S V+ + +EG+++ A R M GI ++ + L
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 153/359 (42%), Gaps = 35/359 (9%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N ++ + + ++++ F ++ + G + + TY+ LI F A+++
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKA 339
M ++ + Y +I L K G+ A ++ Q + K + + + S++D K
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G DSA++ + EM G P + SLI + KS +++ AL + EMK + + Y
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I+ K + A + FS++ + G +P S Y L+ G++D A+ LY M N
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLA 519
G+ L TYT ++ L +K+G+++LA
Sbjct: 724 DGISCDLFTYTTMIDGL----------------------------------LKDGNINLA 749
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+ GI + + L K G + A +LE +++LY++++A
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 4/329 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P++ Y +L DG +++D + ++M +A++ + V N +I L K + +
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQM---NASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 241 FCCFKK-IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ I++ + +YNS+I F+ G A E Y M + + T+ +I
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
KS R+D A ++ EMK + L + +L+D K + +A + E+ G P
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
++Y SLI + GK++ A+ L+ +M G + YT +I+ K G +++A +
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
S++ G +P + L+ + GQ A K+ M + P + Y+ ++ +
Sbjct: 754 SELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHRE 813
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLM 508
++ A ++ EM G D T ++L+
Sbjct: 814 GNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 178/404 (44%), Gaps = 2/404 (0%)
Query: 203 QLLFDEMVGDSANSGVSLLV-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNS 261
++ + +V S G L A N ++ + ++++ + CF + D N+
Sbjct: 150 NVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNN 209
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG 321
+++ + L +A EIY M D+ T +L++ + + + A K+F+ + RG
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 322 FRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG-FGYRPPPTIYVSLIESYVKSGKLETA 380
P +F+ V + K L A+ + EMRG G Y S+I ++VK G +E A
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
+R+ DEM G + T ++ + K +L A+ F+ ME+ G P ++ ++E
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
+ +++ A++ Y M + + P ++ + + A +I + +
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG 449
Query: 501 VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLET 560
+ + +++ K+G VD A +L+ M GI N + + + + A+ +
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 561 YVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAH 604
+ + + Y+ ++ + ++E+N +++ + A+ +A+
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 112/250 (44%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I K + + ++++ + G + T+ SLI F A E+ M+
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
LD Y +I K + A+ LF E+ G P ++++ SL+ G++D+
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A+ ++ +M G Y ++I+ +K G + A L+ E+ G P+ L+ +++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+K G+ A +M+K P Y+ ++ H G ++ A +L++ M G+
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 465 GLSTYTVLLT 474
+ + +L++
Sbjct: 834 DDTVFNLLVS 843
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 147/382 (38%), Gaps = 36/382 (9%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G ETY S+I F+ +G +A + + M + ++ K L A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
LF M+ G P +F+ +V+ K ++ A++ +M M+ P + ++I+
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 371 YVKSGKLETALRLWDE----------------------------------MKIAGYRPNF 396
+K+ E AL ++++ M+ G PN
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
Y ++ +H + +D+A S FS+M + G P TY+ L++ + +A + N
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM-KAMGYSVDVTA-SDVLMVYIKEG 514
M + Y ++ L A ++L + K YS+ T+ + ++ ++K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 515 SVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYT 574
D A+ R M +G N L KS + A + + K+DL Y
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 575 SILAHLVRCQEEKNERHLMSIL 596
+++ + + K L S L
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSEL 686
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 160 VNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVS 219
V D D+ + +R ++ SP+ + L +G +S D L EM + + +
Sbjct: 603 VGDTDSAVETYREMS-ENGKSPNVVTFTSLINGFCKSNRMD----LALEMTHEMKSMELK 657
Query: 220 L-LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI 278
L L A +I K ++ ++ F ++ + G + YNSLI+ F N G A ++
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 279 YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
Y+ M D TY MI L K G ++ A L+ E+ G P + LV+ + K
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
G+ A K+ EM+ P +Y ++I + + G L A RL DEM G + +
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 399 YTLVI 403
+ L++
Sbjct: 838 FNLLV 842
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 172/405 (42%), Gaps = 17/405 (4%)
Query: 164 DAGLSLFRWA-KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV 222
D L +F +A K ++ + D Y + L+R+R FD V+ ++ D NS +
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVE----SLMADLRNSYPPIKC 118
Query: 223 ACNRVIQYLAK---AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY 279
N I L A + E S F +I D G K + N+L+ + + + F++
Sbjct: 119 GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN----QRFDLV 174
Query: 280 ESMEKTS-----CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
+M K S + T L++ L K +++A+K+ E+ G P L + +++
Sbjct: 175 HAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
G ++SA +V EM G+ P T Y L++ Y K G+ A + D+M+ P
Sbjct: 235 GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
N Y ++I + K K A + F +M + F+P S +++ ++D A L+
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEG 514
M P + + L+ L + V A K+ E + +T + ++ ++G
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKG 414
Query: 515 SVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ A R M + N F L E K+G + +LE
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 146/350 (41%), Gaps = 36/350 (10%)
Query: 213 SANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLI--------- 263
+ +SG SL A N ++ L ++ E++F ++K+ + I+ + + L+
Sbjct: 64 AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKT 123
Query: 264 -------TLFLNKGLPY-------------------KAFEIYESMEKTSCLLDSSTYELM 297
L L +G + KA + M + S + D +Y +
Sbjct: 124 GFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I + L+ A +L EMKG G L + L+D+ KAG++D AM EM+ G
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
+Y SLI + G+L+ L+DE+ G P Y +I K G+L A
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
F M + G P TY L++ G+ A++L N M P TY +++ L
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 478 NKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFM 526
LV A +I+ MK D +T + +L +G +D A + L M
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D +YN+LI + ++A +IY+ + + D T +++ + K+G ++ A +L+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+++ + + +++D K G L+ A + +MR +P Y L+ S K
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G L+ A RL++EM+ P+ + ++I+ K+G + A S M +AG P TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+ L+ G +D A+ ++ M ++G P +L ++ D +++ ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 495 MGYSVDVTASDVLMVYIKEGS--VDLALRWLR 524
+D + +M Y+ S +DLA R LR
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 249 DAGCKIDTE-----------TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+A CK+ E TYNSLI KA + E M K ++ T+ L+
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L G + A KL +M+ RG +PGL + L+ +GK GR+D A + EM+
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
+P IY L+ ++ A R+ EM++ G +PN A Y ++I+ + D ++
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+ M + PTP+T+ C++ G +DHA + M L G + LL+ L
Sbjct: 383 VLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Query: 478 NK 479
K
Sbjct: 443 IK 444
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 166/398 (41%), Gaps = 12/398 (3%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSWYS--PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSA 214
LK + D + LSLF + + PS Y L L +SR+FD V + + +
Sbjct: 56 LKEIEDPEEALSLFHQYQEMGFRHDYPS---YSSLIYKLAKSRNFDAVDQILRLVRYRNV 112
Query: 215 NSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYK 274
SL + +IQ+ KA ++ + F KI C ++ N+LI + ++ G K
Sbjct: 113 RCRESLFMG---LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEK 169
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A ++ + +S ++ ++I +AA K+F EM +P + + SL+
Sbjct: 170 AKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ + + A + +M RP + L++ G+ A +L +M+ G +P
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
Y +++ K G++D A +M+K P Y L+ ++ A ++
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV--YIK 512
M G +P +TY +++ + D +L M A + A+ V MV IK
Sbjct: 350 TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH-CPTPATFVCMVAGLIK 408
Query: 513 EGSVDLALRWLRFMGSSGIRTNNFIIRQLFES-CMKSG 549
G++D A L MG + + + L C+K G
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 124/314 (39%), Gaps = 36/314 (11%)
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
P +A ++ ++ D +Y +I LAKS DA ++ + ++ R R ++F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
L+ GKAG +D A+ V ++ F +LI V +G+LE A +D K
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
RPN + ++I+ + A F +M + P+ TY L+ + + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI 511
L M +RP T+ +L+ L K + A K++ +M+ G + +LM
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS-- 299
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
DL K G + AK LL K D++
Sbjct: 300 -----DLG---------------------------KRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 572 LYTSILAHLVRCQE 585
+Y ++ HL C E
Sbjct: 328 IYNILVNHL--CTE 339
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 168/415 (40%), Gaps = 48/415 (11%)
Query: 136 ELDTQLDKLQFVPNMTHVTQAL-KVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLN 194
EL +L++ P+ V + L +V ND + + F WA +Q Y S Y + L
Sbjct: 113 ELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILG 172
Query: 195 RSRDFDGVQLLFDEM--VGDSANSGVSLLVACNR--VIQYLAKA---------------- 234
+ R FD L DEM S + +LL+ + + + KA
Sbjct: 173 KMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGI 232
Query: 235 ---EKLEVSFCCFKKIQDAGCKI---------DTETYNSLITLFLNK-GLPYKAFEIYES 281
+ L + C +K + DAG I D +++N ++ + N G P +A ++
Sbjct: 233 DDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME 292
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
M D +Y MI +K G L+ KLF MK P ++ ++V ++ KA
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 342 LDSA---MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
+ A MK E +G P Y SLI+ K+ K E A +++DEM G P
Sbjct: 353 VSEARNLMKTMEEEKGI--EPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 399 YTLVIESHAKSGKLDIAMSAF---SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
Y HA L F + M K G PT TY L+ D+ + L++
Sbjct: 411 Y------HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWD 464
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY 510
M + P LS+Y V++ L ++ A EMK G + D++ +
Sbjct: 465 EMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSW 519
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 163/369 (44%), Gaps = 6/369 (1%)
Query: 166 GLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
F WA + ++ + Y + L ++R F+ + + +EM G+ +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFT 233
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++ A A++ + + F+ ++ KI ET N L+ L +A +++ + K
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KE 292
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+ TY +++ + L A +++ +M G +P + +++ + ++ + A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+K+ M+ G P Y +I + K +ETA+ +D+M +G +P+ A+YT +I
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
KLD +M++ G P TY L+++ A +H ++YN M + P
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLR 524
+ T+ +++ + ++ + EM G D + VL+ I EG A R+L
Sbjct: 473 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 532
Query: 525 FMGSSGIRT 533
M G++T
Sbjct: 533 EMLDKGMKT 541
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR--VIQYLAKAEKLEVSFCCFKK 246
L D L R++ Q+LFD++ + ++ V N ++ L +A ++ +
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI------WND 323
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ D G K D +N ++ L A +++ M+ + +Y +MI + K
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A + F +M G +P ++ L+ G +LD+ ++ EM+ G+ P Y +
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ E R++++M P+ + ++++S+ + ++ + + +M K G
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
P ++Y L+ + G+ A + M + G++ L Y
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 42/307 (13%)
Query: 124 IVEVVKRWKWGPELDTQLDKLQ--FVPNMTHVT-------------QALKVVNDG-DAGL 167
+++ + R K G E DKL+ F PNM T +A ++ ND D GL
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 329
Query: 168 ------------SLFRWAKRQSWYS-----------PSDDCYVMLFDGLNRSRDFDGVQL 204
L R K+ P+ Y ++ + +
Sbjct: 330 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 205 LFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLIT 264
FD+MV DS + + C +I +KL+ + K++Q+ G D +TYN+LI
Sbjct: 390 YFDDMV-DSGLQPDAAVYTC--LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
L N+ +P IY M + T+ +++ + + + ++ EM +G P
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
N + L+ + G+ A + EM G + P Y + + G+ E L
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELA 566
Query: 385 DEMKIAG 391
K +G
Sbjct: 567 QRAKFSG 573
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 162/369 (43%), Gaps = 6/369 (1%)
Query: 166 GLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
F WA + ++ Y + L ++R F+ + + +EM G+ +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM----GTKGLLTMETFT 232
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++ A A++ + + F+ ++ KI ET N L+ L +A +++ + K
Sbjct: 233 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KE 291
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+ TY +++ + L A +++ +M G +P + +++ + ++ + A
Sbjct: 292 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+K+ M+ G P Y +I + K +ETA+ +D+M +G +P+ A+YT +I
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
KLD +M++ G P TY L+++ A +H ++YN M + P
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLR 524
+ T+ +++ + ++ + EM G D + VL+ I EG A R+L
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 531
Query: 525 FMGSSGIRT 533
M G++T
Sbjct: 532 EMLDKGMKT 540
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR--VIQYLAKAEKLEVSFCCFKK 246
L D L R++ Q+LFD++ + ++ V N ++ L +A ++ +
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARI------WND 322
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ D G K D +N ++ L A +++ M+ + +Y +MI + K
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A + F +M G +P ++ L+ G +LD+ ++ EM+ G+ P Y +
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ E R++++M P+ + ++++S+ + ++ + + +M K G
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
P ++Y L+ + G+ A + M + G++ L Y
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 42/307 (13%)
Query: 124 IVEVVKRWKWGPELDTQLDKLQ--FVPNMTHVT-------------QALKVVNDG-DAGL 167
+++ + R K G E DKL+ F PNM T +A ++ ND D GL
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 328
Query: 168 ------------SLFRWAKRQSWYS-----------PSDDCYVMLFDGLNRSRDFDGVQL 204
L R K+ P+ Y ++ + +
Sbjct: 329 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 388
Query: 205 LFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLIT 264
FD+MV DS + + C +I +KL+ + K++Q+ G D +TYN+LI
Sbjct: 389 YFDDMV-DSGLQPDAAVYTC--LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
L N+ +P IY M + T+ +++ + + + ++ EM +G P
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
N + L+ + G+ A + EM G + P Y + + G+ E L
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELA 565
Query: 385 DEMKIAG 391
K +G
Sbjct: 566 QRAKFSG 572
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 192/463 (41%), Gaps = 12/463 (2%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVML 189
R W P+ + Q+ L + V L+ +D L F WA RQ Y Y +
Sbjct: 154 RSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSM 213
Query: 190 FDGLNRSRDFDGVQLLFDEMVGDSANSGV-SLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
+ L++++ G + + M G+ A +RV+ ++A +L + +Q
Sbjct: 214 LEVLSKTKLCQGSRRVLVLM----KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQ 269
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
AG + + N+ I +F+ KA E M+ + + TY MI R++
Sbjct: 270 RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE 329
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTIYVSL 367
A +L ++M +G P + +++ + K R+ + +M + G P Y +L
Sbjct: 330 EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTL 389
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
I K + AL + + G+R + Y+ ++ + K G++ A ++M G
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 428 LPTP-STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY ++ G++D A KL M G +P +YT LL + + + A
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC-RTGKSLEA 508
Query: 487 KILLEMKAMGY--SVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
+ ++ M + +T S ++ +EG + A +R M G I L +S
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 568
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
+ G A+ +E +N ++++ +T+++ CQ ++
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF--CQNDE 609
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 3/309 (0%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D Y M+ L+K+ + ++ MK RG F+ ++ S +AG+L A+KV
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
M+ G P I + I+ +V++ +LE ALR + M++ G PN Y +I +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLST 468
+++ A+ DM G LP +Y ++ +I L M GL P T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMG 527
Y L+ +L D A L + + G+ +D + S ++ KEG + A + M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 528 SSGIRTNNFII-RQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEE 586
S G + + + + G + AK LL+ K + + YT++L + R +
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 587 KNERHLMSI 595
R +M++
Sbjct: 506 LEAREMMNM 514
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 3/340 (0%)
Query: 227 VIQYLAKAEKL-EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++ YL K +++ EV K ++ G D TYN+LI + +A + ++
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF-RPGLNIFASLVDSMGKAGRLDS 344
+D Y ++ L K GR+ A L EM +G P + + ++V+ + G +D
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A K+ M G++P Y +L+ ++GK A + + + + PN Y++++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+ GKL A +M GF P P LL+ G+ A K N G
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWL 523
+ +T ++ +D A +L +M + DV T + ++ K+G + A +
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVN 563
+ M GI R + + G + +LE ++
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 322 FRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETAL 381
+R ++ S+++ + K + +V + M+ G P + ++ SY ++G+L AL
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 382 RLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMH 441
++ M+ AG PN + I+ ++ +L+ A+ M+ G +P TY C++ +
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 442 AASGQIDHAMKLYNSMTNAGLRPG-LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
+++ A++L M + G P +S YT++ L K++V+V + K G D
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 501 -VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL- 558
VT + ++ + K D AL +L+ G R + + + K G AK L+
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442
Query: 559 ETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
E D++ YT+++ R E + L+ ++ HK ++
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N L+ G ++A + E C ++ + +I ++ LDAA + +M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
+ + +LVD++GK GR+ A ++ +M G P P Y ++I Y + GK++
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
+ + ++M + +Y VIE GKL+ A + + + T L+E
Sbjct: 683 LVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ G A K+ M N L P + L L K VD A K++L + G+
Sbjct: 741 GYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGH 798
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 11/289 (3%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
+ W+SP+ Y ++ GL R + EMV G V N ++Q L +
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP---VEINLLLQSLCRDG 573
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+ + ++ + GC I+ + ++I F A + + M + D TY
Sbjct: 574 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 633
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
++ L K GR+ A +L ++M +G P + +++ + G++D + + +M
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--I 691
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
+ TIY +IE GKLE A L ++ R + ++E + K G +
Sbjct: 692 SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG---VP 748
Query: 416 MSAFS---DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+SA+ M +P L + G++D A KL + G
Sbjct: 749 LSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
++ G K D YN LI F G A + M+ TY ++I +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
D F + +EM+ G P + + +L++ + K +L A V +M G P IY
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ GK+E A R EM G N Y +I+ + +GKL A ++ + G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P TY L+ + +G + + LY M +G++P L TY +L++ L K+ +++
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTE 653
Query: 487 KILLEM 492
++ EM
Sbjct: 654 RLFGEM 659
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 196/492 (39%), Gaps = 75/492 (15%)
Query: 155 QALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVG--- 211
QA ++D GL LF K Y PS Y +L DGL + + + + LFDEM+
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 212 ---------------DSANSGVSL--------------LVACNRVIQYLAKAEKLEVSFC 242
+ N S L+ N +++ L KA +E +
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 243 CFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLA 302
K+++D G D T++ L + + A +YE+ + +++ T +++ L
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA-MKVHMEMRGFGYRPPP 361
K G+++ A ++ +G P I+ +++D + G L A MK+ M G +P
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA-MEKQGMKPDH 424
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y LI + + G++E A + ++MK+ G P+ Y ++I + + + D +
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 422 MEKAGFLPTPSTYACLL-----------------EMH------------------AASGQ 446
ME G +P +Y L+ +M + G+
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASD 505
I+ A + M G+ L TY L+ L+ + A +LLE+ G DV T +
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 506 VLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
++ Y G+V + M SGI+ L C K G+ + + E +
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM----S 660
Query: 566 AKVDLILYTSIL 577
K DL++Y +L
Sbjct: 661 LKPDLLVYNGVL 672
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 173/446 (38%), Gaps = 41/446 (9%)
Query: 172 WAKRQSWYSPSDDCYVMLFDGLNRSRDFD-GVQLLFDEMVGDSANSGVSLLVACNRVIQY 230
+A R PS D +L D L +++ F + + + + D S + IQ
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY----GKAIQA 188
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
K + F +++ YN LI A ++++ M L
Sbjct: 189 AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY +I K+G + +FK+ + MK P L F +L+ + KAG ++ A V
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD-----------------------EM 387
EM+ G+ P + L + Y + K E AL +++ E
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 388 KIA------------GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
KI G PN +Y +I+ + + G L A MEK G P Y
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM 495
CL+ G++++A K N M G+ P + TY +L+ K D IL EM+
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 496 GYSVDVTASDVLMVYIKEGSVDLALRWL-RFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
G +V + L+ + +GS L + + R M G+ I L + C G E A
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 555 KPLLETYVNSAAKVDLILYTSILAHL 580
+ + +++L+ Y +++ L
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGL 574
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 7/334 (2%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
SPS + Y +L G R +FD + EM N + +V+ +I L K KL
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEM---EDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ + ++D G YN LI +KG AF + M K L+ TY +I
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
L+ +G+L A L E+ +G +P + + SL+ G AG + + ++ EM+ G +P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y LI K G +E RL+ EM + +P+ +Y V+ +A G ++ A +
Sbjct: 633 TLKTYHLLISLCTKEG-IELTERLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
M + +TY L+ G++ L + M + P TY +++
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE 513
K A EM+ G+ +DV + L+ +KE
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 1/291 (0%)
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
+Y L+ L +S + A LF ++ G P + L+D + K + + V + +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
+RP +Y I++ VK + L L++ MK P+ +Y ++I+ K ++
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+ A F +M LP+ TY L++ + +G + + K+ M + P L T+ L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
L L +V+ A +L EMK +G+ D T S + Y + AL SG+
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ N + L + K G E A+ +L + + ++Y +++ R
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 136/329 (41%), Gaps = 2/329 (0%)
Query: 262 LITLFLNKG-LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR 320
L+++ LN+ + +A +++ ++ S + L++ +L K+ + +F +
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETA 380
FRP ++ + + K + +++ M+ P IY LI+ K ++ A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
+L+DEM P+ Y +I+ + K+G + + M+ P+ T+ LL+
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
+G ++ A + M + G P T+++L ++ + + A + G ++
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 501 V-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
T S +L KEG ++ A L + G+ N I + + + G A+ +E
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 560 TYVNSAAKVDLILYTSILAHLVRCQEEKN 588
K D + Y ++ E +N
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 168/381 (44%), Gaps = 8/381 (2%)
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQ 229
FR+ K +P+ + ML S+D +G + + +V +S + L +I
Sbjct: 456 FRFTKL--ILNPTMSTFNMLMSVCASSQDIEGARGVL-RLVQESGMTADCKLYTT--LIS 510
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
AK+ K++ F F ++ ++G + + T+ +LI G KAF Y + +
Sbjct: 511 SCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKP 570
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG--FRPGLNIFASLVDSMGKAGRLDSAMK 347
D + +I +SG +D AF + EMK P +L+ + AG+++ A +
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE 630
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
V+ + +G R P +Y + S KSG + A ++ +MK P+ ++ +I+
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAG 690
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLS 467
+ LD A D + G +Y+ L+ + A++LY + + LRP +S
Sbjct: 691 HAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIS 750
Query: 468 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFM 526
T L+T L + A + L E+K +G + +T S +++ ++ +++ + L
Sbjct: 751 TMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQA 810
Query: 527 GSSGIRTNNFIIRQLFESCMK 547
G+ N + R + C +
Sbjct: 811 KGDGVSPNLIMCRCITSLCKR 831
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 12/310 (3%)
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
P + FE++ S ++ D+ L + GR+ L +++ R I+
Sbjct: 386 FPARNFELHNSNGRSPETSDAYN------RLLRDGRIKDCISLLEDLDQRDLLDMDKIYH 439
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+ S KA + A+K P + + L+ S +E A + ++ +
Sbjct: 440 A---SFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQES 496
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G + LYT +I S AKSGK+D F M +G T+ L++ A +GQ+ A
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD---VTASDVL 507
Y + + ++P + L++ VD A +L EMKA + +D ++ ++
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
Query: 508 MVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAK 567
G V+ A + + GIR + SC KSG ++ A + +
Sbjct: 617 KACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVT 676
Query: 568 VDLILYTSIL 577
D + +++++
Sbjct: 677 PDEVFFSALI 686
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 152/381 (39%), Gaps = 39/381 (10%)
Query: 147 VPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLF 206
VP+ H+ + + L FRWA + S Y LF L R FD V L
Sbjct: 40 VPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 207 DEM---VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLI 263
DEM +G + + + +I+ +A ++ + G K + +NS++
Sbjct: 100 DEMPDSIGLPPDDAIFV-----TIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSIL 154
Query: 264 TLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR 323
+ + + + M + D TY +++ L+ + R+ FKL Q MK G
Sbjct: 155 DVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVA 214
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMR------------------------------ 353
P ++ +L+ ++ K G++ A + EM+
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKC 274
Query: 354 -GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
G+ P ++E G++ AL + + ++ G + + +++ + GK+
Sbjct: 275 FSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+A F +ME+ G+LP TY L+ + G +D A+ +N M +R +T+ L
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 473 LTLLANKKLVDVAAKILLEMK 493
+ L+ D KIL M+
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQ 415
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 35/303 (11%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+VACN +++ K+ V+ F +++ G + ETYN LI + + G+ A + +
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI------------ 328
M+ + + +T+ +I L+ GR D K+ + M+ G I
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 329 -----------------FASLVD------SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
F VD S+ + G +D + +M G G P +
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSH 497
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
LI Y + GK+E +L L ++M GY P + + VI K K+ + DM +
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G +P +Y LLE G I A L++ M + P S ++ L+ L+ K + V
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVN 617
Query: 486 AKI 488
+ +
Sbjct: 618 SSL 620
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 13/311 (4%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V +V++ L ++ + ++++ G K+D N+L+ + G A +
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME+ L + TY L+I G LD+A F +MK R F +L+ + G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 341 RLDSAMKVHMEMRG----FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
R D +K+ M+ G R P Y +I + K + E AL +K+ P
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWEDALEFL--LKMEKLFPRA 458
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
+ + S + G +D +A+ M G +P+ CL+ ++ G+I+ +++L N
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIND 518
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSV 516
M G P ST+ ++ + V K + +M G D + + L+ +E V
Sbjct: 519 MVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLL---EELCV 575
Query: 517 --DLALRWLRF 525
D+ WL F
Sbjct: 576 KGDIQKAWLLF 586
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 193/422 (45%), Gaps = 23/422 (5%)
Query: 143 KLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGV 202
K +F+ + + V+ +K D L +F A +Q ++ ++ Y +L D L R + F V
Sbjct: 50 KTKFISHESAVS-LMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAV 108
Query: 203 QLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ-DAGCKIDTETYNS 261
+ +M ++ SL + ++++ ++++ + F IQ A K ++
Sbjct: 109 DAILHQMKYETCRFQESLFL---NLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIST 165
Query: 262 LITLFLNKG--------LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
+ L ++ G L Y + ++ +C+ + +++ + K+G ++ AF +
Sbjct: 166 CLNLLIDSGEVNLSRKLLLYAKHNL--GLQPNTCI-----FNILVKHHCKNGDINFAFLV 218
Query: 314 FQEMKGRGFR-PGLNIFASLVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTIYVSLIESY 371
+EMK G P +++L+D + R A+++ +M G P P + +I +
Sbjct: 219 VEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGF 278
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
++G++E A ++ D MK G PN Y+ ++ K GK+ A F +++K G
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
Y L+ +G+ D AMKL M + R TY V+L L+++ + A ++L +
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 492 MKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
+ G ++ + +++ G ++ A+++L M GI ++ +L +SG
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGY 458
Query: 551 YE 552
E
Sbjct: 459 TE 460
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 153/344 (44%), Gaps = 11/344 (3%)
Query: 148 PNMTHVTQALKV-VNDGDAGLS--LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQL 204
P++ ++ L + ++ G+ LS L +AK P+ + +L ++ D + L
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFL 217
Query: 205 LFDEM--VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKK-IQDAGCKIDTETYNS 261
+ +EM G S + ++ + + + E +E+ F+ I G D T+N
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL----FEDMISKEGISPDPVTFNV 273
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG 321
+I F G +A +I + M+K C + Y ++ K G++ A + F E+K G
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 322 FRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETAL 381
+ + +L++ + G D AMK+ EM+ R Y ++ G+ E AL
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 382 RLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMH 441
++ D+ G N Y +++ + +G+L+ A+ S M + G P +T+ L+
Sbjct: 394 QMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Query: 442 AASGQIDHAMKLYNSMTNAGLRPGLSTY-TVLLTLLANKKLVDV 484
SG + +++ GL PG ++ V+ ++ +KLV V
Sbjct: 454 CESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHV 497
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 174 KRQSWYSPSDDCYVMLFDGL-NRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYL 231
KR P+ Y L D L SR + V+L F++M+ + G+S V N +I
Sbjct: 223 KRSGISYPNSITYSTLMDCLFAHSRSKEAVEL-FEDMI---SKEGISPDPVTFNVMINGF 278
Query: 232 AKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS 291
+A ++E + ++ GC + Y++L+ F G +A + ++ ++KT LD+
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
Y ++ ++G D A KL EMK R + ++ + GR + A+++ +
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
G Y ++ + +G+LE A++ M G P+ A + ++ +SG
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGY 458
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
+I + + G +P P ++ ++E ++ H +L +S+
Sbjct: 459 TEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 149/354 (42%), Gaps = 39/354 (11%)
Query: 258 TYNSLITLFLNKGLPYKAFEIY-ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQE 316
++ S ++L + P +I+ ++ ++ +++TY +++ NL + + A + +
Sbjct: 55 SHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQ 114
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS-LIESYVKSG 375
MK R ++F +L+ ++ D M++ ++ P +S + + SG
Sbjct: 115 MKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSG 174
Query: 376 KLETALRLWDEMKIA-GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF-LPTPST 433
++ + +L K G +PN ++ ++++ H K+G ++ A +M+++G P T
Sbjct: 175 EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSIT 234
Query: 434 YACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
Y+ L++ A + A++L+ M + G+ P T+ V++
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMIN------------------ 276
Query: 493 KAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
+ + G V+ A + L FM +G N + L K G +
Sbjct: 277 ----------------GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 553 SAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSF 606
AK + + K+D + YT+++ R E L+ + A++ +A +
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 7/332 (2%)
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
CK D ++NSL F + + F +Y + C + TY I KSG L A
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
K F MK P + F L+D KAG L+ A+ ++ EMR Y +LI+ +
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K G+++ A ++ M PN +YT +I+ + G D AM + M G
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+ Y ++ +G++ A ++ M + L P + +T ++ + A + +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 492 MKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
+ G+ DV A ++ I K G + A+ + + N+ + L ++ K G
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEGD 418
Query: 551 YESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + L + D +YTS +A L +
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 157/344 (45%), Gaps = 9/344 (2%)
Query: 162 DGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL 221
D + +SL++ +R S + Y L DG + + + ++ MV D L
Sbjct: 213 DLEVAVSLYKEMRRVRM-SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS--L 269
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V + + + + + + K+ + G ++D Y +I+ G +A EI E
Sbjct: 270 VYTTIIDGFFQRGDS-DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
MEK+ + D + M+ KSGR+ AA ++ ++ RGF P + ++++D + K G+
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
L A+ V+ + + +Y LI++ K G RL+ ++ AG P+ +YT
Sbjct: 389 LHEAI-VYFCIE----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
I K G L A + M + G L Y L+ A+ G + A ++++ M N+G
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD 505
+ P + + +L+ + + A+ +LL+M+ G V+ +D
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDAD 547
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 5/334 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N V+ ++ K +++ + + GC+ D +YNSLI G A + ES+
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 285 TS---CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+ C D ++ + +K LD F ++ + + P + +++ +D+ K+G
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGE 178
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
L A+K M+ P + LI+ Y K+G LE A+ L+ EM+ N YT
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I+ K G++ A +S M + P Y +++ G D+AMK M N G
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLAL 520
+R ++ Y V+++ L + A +I+ +M+ D+ +M Y K G + A+
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
+ G + + + + K+G A
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 33/363 (9%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I K+ +L+++ F ++ + T+ LI + G A +Y+ M +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
L+ TY +I K G + A +++ M P ++ +++D + G D+AMK
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
+M G R T Y +I +GKL+ A + ++M+ + P+ ++T ++ ++
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM---------------- 451
KSG++ A++ + + + GF P + +++ A +GQ+ A+
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 452 --------------KLYNSMTNAGLRPGLSTYTVLLTLLANK-KLVDVAAKILLEMKAMG 496
+L++ ++ AGL P YT + L + LVD A K+ M G
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD-AFKLKTRMVQEG 468
Query: 497 YSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
+D+ A L+ + +G + A + M +SGI ++ + L + K G +A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 556 PLL 558
LL
Sbjct: 529 DLL 531
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 233 KAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS 292
K+ +++ + + K+ + G + D +++I G ++A +Y +EK + ++
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDVM--- 405
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
Y ++I L K G +LF ++ G P ++ S + + K G L A K+ M
Sbjct: 406 -YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
G Y +LI G + A +++DEM +G P+ A++ L+I ++ K G +
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
Query: 413 DIAMSAFSDMEKAGFLPTPSTYAC 436
A DM++ G + S C
Sbjct: 525 AAASDLLLDMQRRGLVTAVSDADC 548
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 168/364 (46%), Gaps = 9/364 (2%)
Query: 157 LKVVNDGDAGLSLFRWAKRQSW-----YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVG 211
L+ ND A + LFR +S + S CY ++ L S+ FD + + +
Sbjct: 16 LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75
Query: 212 DSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGL 271
D+ ++ CN VI + + + + F ++ C+ ++ NSL++ L G
Sbjct: 76 DTRIVPTEIIF-CN-VINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE 133
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
K E S+++ D+ TY ++I ++SG D A KLF EM + +P F +
Sbjct: 134 LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 332 LVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
L+ + K R+ A+K+ +M + +G RP IY SLI++ + G+L A +L DE
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
+ + A+Y+ +I S K+G+ + +M + G P TY L+ + A
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY 510
++ + M GL+P + +Y ++L + K + A + +M G S D + ++
Sbjct: 313 NRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Query: 511 IKEG 514
+ EG
Sbjct: 373 LCEG 376
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
K D TYN LI G A ++++ M K T+ +I L K R+ A K
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 313 LFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
+ +M K G RP ++I+ASL+ ++ + G L A K+ E + IY +LI S
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
+K+G+ + +EM G +P+ Y ++I + A +M + G P
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+Y +L + + + A L+ M G P +Y ++ L + AA IL E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 492 MKAMGY 497
M GY
Sbjct: 389 MLFKGY 394
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 13/325 (4%)
Query: 171 RWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSAN-SGVSLLVACNRVIQ 229
R + + P Y +L G ++S FD LFDEMV +GV+ +I
Sbjct: 140 RLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF----GTLIH 195
Query: 230 YLAKAEKLEVSFCCFKKIQDA----GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
L K +++ + K D G + Y SLI G AF++ + +
Sbjct: 196 GLCKDSRVKEAL---KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+D++ Y +I +L K+GR + + +EM +G +P + L++ +SA
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+V EM G +P Y ++ + + K E A L+++M G P+ Y +V +
Sbjct: 313 NRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+ + + A +M G+ P L+ SG+++ K+ +S+ + G+
Sbjct: 373 LCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGD 431
Query: 466 LSTYTVLLTLLANKKLVDVAAKILL 490
++V++ + + ++ + +LL
Sbjct: 432 ADVWSVMIPTMCKEPVISDSIDLLL 456
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 116/292 (39%), Gaps = 4/292 (1%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMK-GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
Y+++I L S D ++ +K P IF ++++ G+ A+ + EM
Sbjct: 50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM 109
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
+ + SL+ + +K G+LE + G +P+ Y ++I ++SG
Sbjct: 110 PQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCF 168
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTV 471
D A+ F +M K PT T+ L+ ++ A+K+ + M G+RP + Y
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSG 530
L+ L + A K+ E VD S ++ IK G + L M G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + L ESA +L+ V K D+I Y IL R
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFR 340
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 9/338 (2%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC--NR 226
F W Q + + +CY +L ++ + L DEM+ D + AC N
Sbjct: 138 FFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPT-----TACTFNL 192
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE-IYESMEKT 285
+I +A F K + + +YN+++ L YK + +YE M +
Sbjct: 193 LICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK-QYKLIDWVYEQMLED 251
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
D TY +++ + G+ D ++L EM GF P L + L+ + + +A
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ + MR G P + +LI+ ++GKLE DE G P+ YT++I
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+ G+L+ A F +M + G LP TY ++ +G+ A L M + G P
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
Y+ L+ L N V A +++ +M G+ V + +
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
++ Y L++ A+ G A +L EM G+ F L+ + G+AG ++ +
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
+ + F YRP Y +++ S + + + ++++M G+ P+ Y +V+ ++ + G
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
K D +M K GF P TY LL A + A+ L N M G+ PG+ +T
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSS 529
L+ L+ ++ + E +G + DV V++ YI G ++ A + M
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
G N F + +G ++ A LL+ + + ++Y++++ +L
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 10/293 (3%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGV---SLLVACNRVIQYLAKAE 235
Y + CY L L R + ++ L+ EM+ D + + + LV + Y+ +A+
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+ V++ + AGC D TY S IT + AF++++ M + C + +Y
Sbjct: 176 QY-VTW-----LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I L ++ ++D A L +MK P + + L+D++ +G+ AM + +M
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
G +P +Y LI+S+ L+ A L + M G PN Y +I+ K + A
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKA 348
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
M S M + +P TY L+ +SG +D A +L + M +GL P T
Sbjct: 349 MGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 2/283 (0%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
K+ + YN+L++ GL + +Y M + D T+ ++ K G + A +
Sbjct: 117 KLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ 176
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
+ G P + S + + +D+A KV EM G Y LI
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
++ K++ AL L +MK PN YT++I++ SG+ AM+ F M ++G P
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
Y L++ + +D A L M GL P + TY L+ KK V A +L +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKM 355
Query: 493 KAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
D+ + L+ G++D A R L M SG+ N
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 27/332 (8%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC------------------------- 287
K + +Y SL+TL ++ +PY+ +I M K SC
Sbjct: 57 KHNVTSYASLVTLLCSQEIPYEVPKITILMIK-SCNSVRDALFVVDFCRTMRKGDSFEIK 115
Query: 288 -LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
L Y ++ +LA+ G ++ +L+ EM P + F +LV+ K G + A
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ + G P Y S I + + +++ A +++ EM G N YT +I
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
++ K+D A+S M+ P TY L++ SGQ AM L+ M+ +G++P
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFM 526
YTVL+ + +D A+ +L M G +V + L+ + +V A+ L M
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKM 355
Query: 527 GSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+ + L SG +SA LL
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 5/242 (2%)
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
Y+ P Y +L+ S + G +E RL+ EM P+ + ++ + K G + A
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ + +AG P TY + H ++D A K++ MT G +YT L+ L
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNN 535
K +D A +L++MK +V VL+ G A+ + M SGI+ ++
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSI 595
+ L +S + A LLE + + ++I Y +++ + KN M +
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK----KNVHKAMGL 351
Query: 596 LG 597
L
Sbjct: 352 LS 353
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 2/292 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELMIPNLA 302
F++ Q C + + T ++I ++ KGL +A ++ S D Y +MI
Sbjct: 468 FERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
K+ + A LF+ MK +G P + SL + +D A ++ EM G +P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
Y ++I SYV+ G L A+ L++ M+ G +PN +Y +I A+SG ++ A+ F M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
E+ G L++ ++ G ++ A ++Y+ M ++ P ++ +L+L A+ +V
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 483 DVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
A I ++ G ++ + ++ +Y G +D A+ M SG+ ++
Sbjct: 707 SEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 2/288 (0%)
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
Y K +E + K +G + D YN +I + L KA +++ M+
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY + LA +D A ++ EM G +PG +A+++ S + G L A+ ++
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
M G +P +Y SLI + +SG +E A++ + M+ G + N + T +I++++K
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G L+ A + M+ + P + +L + A G + A ++N++ G +S +
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS-F 727
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSV 516
++ L ++D A ++ EM+ G D T+ + V+ Y +G +
Sbjct: 728 ATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQL 775
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ KA+ E + FK +++ G D TYNSL + L +A I M
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ C TY MI + + G L A L++ M+ G +P ++ SL++ ++G ++
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A++ M G + + SLI++Y K G LE A R++D+MK + P+ A ++
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
A G + A S F+ + + G S +A ++ ++ G +D A+++ M +GL
Sbjct: 699 LCADLGIVSEAESIFNALREKGTCDVIS-FATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEM 492
+++ ++ A + ++ EM
Sbjct: 758 DCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 31/330 (9%)
Query: 213 SANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLP 272
S S V ++ N V++ L +A K + C+ ++ G TY L+ ++ GL
Sbjct: 137 SHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLV 196
Query: 273 YKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG-LNIFAS 331
+A + M + D T ++ SG D A + F +G+ G +++
Sbjct: 197 KEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-----KGWCAGKVDLDLD 251
Query: 332 LVDSMGKAGRLDSAMKVH----MEMRGFGYRPP--------------------PTIYVSL 367
+D K G S + + ME+ G R P + + +L
Sbjct: 252 SIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTL 311
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
I+ Y K+G+L A L+ EM +G + + +I + G L A S ME+ G
Sbjct: 312 IDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGI 371
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
P TY LL +HA +G I+ A++ Y + GL P T+ +L +L +K+V
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEA 431
Query: 488 ILLEMKAMGYSVDVTASDVLM-VYIKEGSV 516
++ EM +D + V+M +Y+ EG V
Sbjct: 432 VIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 5/379 (1%)
Query: 212 DSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGL 271
DS+ L N +I KA +L + F ++ +G IDT T+N++I G
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGH 355
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
+A + + ME+ D+ TY +++ A +G ++AA + +++++ G P +
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRA 415
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
++ + + + V EM R +++ YV G + A L++ ++
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC 475
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAF-SDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
+ L VI+ +A+ G A + F +G Y +++ + + + A
Sbjct: 476 VLSSTTL-AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA 534
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMV 509
+ L+ M N G P TY L +LA LVD A +IL EM G T + ++
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 510 YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD 569
Y++ G + A+ M +G++ N + L +SG+ E A + +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 570 LILYTSILAHL--VRCQEE 586
I+ TS++ V C EE
Sbjct: 655 HIVLTSLIKAYSKVGCLEE 673
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 173/443 (39%), Gaps = 40/443 (9%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDS---ANSGVSLLVA 223
L +FR+ + Y P+ Y ++ L R+ +D ++L + EM + N+ +LV
Sbjct: 129 LRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLV- 187
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
KA ++ + K + D T +++ +F N G +A ++
Sbjct: 188 -----DVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC 242
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG------------------ 325
LD + I + K+G + L Q + F+ G
Sbjct: 243 AGKVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSS 298
Query: 326 ------LNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
+ F +L+D GKAGRL+ A + EM G + ++I + G L
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A L +M+ G P+ Y +++ HA +G ++ A+ + + K G P T+ +L
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
+ + + M +R + V++ + N+ LV V AK L E + +
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV-VQAKALFERFQLDCVL 477
Query: 500 -DVTASDVLMVYIKEGS-VDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
T + V+ VY ++G V+ + SG R + + ++ K+ L+E A L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 558 LETYVNSAAKVDLILYTSILAHL 580
+ N D Y S+ L
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQML 560
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F +++ G D ++ +++ L+ G+ +A E+ E M ++ L D +++ ++ A
Sbjct: 713 FNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 304 SGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP-- 360
G+L +LF EM R F +L + K G A V + P
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA--VSQLQTAYNEAKPLA 829
Query: 361 -PTIYVSLIESYVKSGKLETALRLWDEMKIAGY-RPNFALYTLVIESHAKSGKLDIAMSA 418
P I +L + G AL E+ R +FA Y VI +++ SG +D+A+ A
Sbjct: 830 TPAITATLFSAM---GLYAYALESCQELTSGEIPREHFA-YNAVIYTYSASGDIDMALKA 885
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
+ M++ G P T A L+ ++ +G ++ ++++ +T L P S + + +
Sbjct: 886 YMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVS 945
Query: 479 KKLVDVAAKILLEM 492
D+A + EM
Sbjct: 946 ANRQDLADVVKKEM 959
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 158/393 (40%), Gaps = 48/393 (12%)
Query: 164 DAGLSLFRWAKRQ-SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSG----- 217
+ LSLF+ K Q +W P + Y LF L D Q + EM+ G
Sbjct: 532 EKALSLFKGMKNQGTW--PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYA 589
Query: 218 ---------------VSLLVACNR------------VIQYLAKAEKLEVSFCCFKKIQDA 250
V L A + +I A++ +E + F+ +++
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G + + SLI + G +A +Y+ M+ + D + M+ A G + A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+F ++ +G ++ FA+++ G LD A++V EMR G T + ++
Sbjct: 710 ESIFNALREKGTCDVIS-FATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 371 YVKSGKLETALRLWDEMKIA-----GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
Y G+L L+ EM + + L+TL+ + S + +A+++ A
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE---A 825
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
L TP+ A L +A G +A++ +T+ + Y ++ + +D+A
Sbjct: 826 KPLATPAITATLF---SAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMA 882
Query: 486 AKILLEMKAMGYSVD-VTASDVLMVYIKEGSVD 517
K + M+ G D VT + ++ +Y K G V+
Sbjct: 883 LKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 264 TLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR 323
TLF GL A E + + + Y +I + SG +D A K + M+ +G
Sbjct: 836 TLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
P + A LV GKAG ++ +VH + P +++ ++ ++YV + + + A +
Sbjct: 896 PDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVV 955
Query: 384 WDEMKIA 390
EM IA
Sbjct: 956 KKEMSIA 962
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 170/394 (43%), Gaps = 9/394 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV-ACNRVIQYLAKAEKLEVSFCCFKKI 247
+FD L R+ +G E++ + G + V A N + L +++ + +K++
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRL 307
G + T+N +I F + ++A ++ M K + ++ +MI K+G +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 308 DAAFKLFQEM---KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
A +L +M G P + S+++ KAGRLD A ++ +M G Y
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
+L+++Y ++G + ALRL DEM G N +Y ++ G ++ AMS DM
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
T A ++ +G + A++ ++ L + + L+ K +
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC 449
Query: 485 AAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
A +IL M G S+D + L+ Y+KEG ++ AL M +N I +
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 544 SCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
K G+ +A E VN+ D++ Y ++L
Sbjct: 510 GLSKRGMAGAA----EAVVNAMEIKDIVTYNTLL 539
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 128/301 (42%), Gaps = 4/301 (1%)
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+C ++ ++ ++G A+++ ++ + GF ++ + + + +D
Sbjct: 143 ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
KV+ EM GY + +I S+ K KL AL ++ M G PN + ++I+
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 406 HAKSGKLDIAMSAFSDME--KAGFL-PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
K+G + A+ M F+ P TY ++ +G++D A ++ M +G+
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALR 521
TY L+ D A ++ EM + G V+ + ++ ++ EG ++ A+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
LR M S ++ + F + ++G + A D++ + +++ H V
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 582 R 582
R
Sbjct: 443 R 443
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 10/295 (3%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D T ++ S + A + +M+ G + + + L+D++ K + A++V
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
M+ G P Y SLI KSG+L A R EM PN ++ +I+++AK
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GKL S + M + P TY+ L+ ++D A+K+ + M + G P + TY
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGS 528
+ L VD K+L +M G + + + + L+ Y + G +DLAL +M S
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251
Query: 529 SG----IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+G IR+ N ++ LF +G E A E + +D+I YT I+ H
Sbjct: 252 NGLIPNIRSYNIVLAGLFA----NGEVEKALSRFEHMQKTRNDLDIITYT-IMIH 301
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 11/259 (4%)
Query: 231 LAKAEKLEVSFCCFKKIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+ A L FC I+DA G K D LI L A E+ +
Sbjct: 13 IVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLK 72
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M+ + TY +I L KSGRL A + EM + P + F++L+D+ K G
Sbjct: 73 RMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRG 132
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+L V+ M P Y SLI +++ A+++ D M G PN Y+
Sbjct: 133 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYS 192
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+ KS ++D + DM + G + L++ + +G+ID A+ ++ MT+
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 461 GLRPGLSTYTVLLT-LLAN 478
GL P + +Y ++L L AN
Sbjct: 253 GLIPNIRSYNIVLAGLFAN 271
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 180 SPSDDCYVMLFDGL-NRSRDFDGVQLLFD-EMVGDSANSGVSLLVACNRVIQYLAKAEKL 237
+P+ Y L +G SR DG++LL D G +AN+ V+CN +I+ +A K+
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT-----VSCNTLIKGYFQAGKI 239
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+++ F + G + +YN ++ G KA +E M+KT LD TY +M
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
I + K+ + A+ LF ++K + P + ++ + +AG
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
++M G P SL+ + S ++ A+ + +M+ G + + + T++I++ K+
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
+ A+ M+ G P TY+ L+ SG++ A + + M + + P + T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 470 TVLLTLLANK-KL--VDVAAKILLEMKAMGYSVD---VTASDVLMVYIKEGSVDLALRWL 523
+ L+ A + KL VD K++++M S+D T S ++ VD A++ L
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQM-----SIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 524 RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
M S G N L KS + LL+
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 212
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
Y+ LI + + I + M + D T ++ +KSG + A + F+ +K
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
G RP I+ +++ AG+ ++ EM+ + +Y++L+ +Y + G
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 379 TALRLWDEMKIAGYRP-NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
A + M+ A P +F Y+L +E++ K+G++D A S F +M K G P A L
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANL 566
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+ + +D A++L + G+ G+ TYTVL+ +AN L++ A ++L+++ +G
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 625
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 12/316 (3%)
Query: 153 VTQALKVVNDGD--AGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV 210
V + L+ + +GD +GL L WA+ P+ ++ L + L +++ +
Sbjct: 321 VMEKLESLQEGDDPSGL-LAEWAE---LLEPNRVDWIALINQLREGNTHAYLKVAEGVLD 376
Query: 211 GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
S N+ +S +++I AK +E KK+ G D T +L+ ++ G
Sbjct: 377 EKSFNASIS---DYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSG 433
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+A E +E+++ D YE MI +G+ +L +EM+ + + ++
Sbjct: 434 NFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYM 493
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYVKSGKLETALRLWDEMK 388
+L+ + + G + A + M+ + P + Y +E+Y K+G+++ A +DEM+
Sbjct: 494 ALLRAYAQMGDANGAAGISSSMQ-YASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMR 552
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
G++P+ ++ ++ LD A+ +EK G TY L++ A G I+
Sbjct: 553 KLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIE 612
Query: 449 HAMKLYNSMTNAGLRP 464
A +L ++ G P
Sbjct: 613 EAEQLLVKISQLGEAP 628
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 18/363 (4%)
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
AE LE++ + G + D+ TYN L F G+ A+E+ M D T
Sbjct: 274 AEALELA----SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS-LVDSMGKAGRLDSAMKVHMEM 352
Y +++ + G +D L ++M RGF I S ++ + K GR+D A+ + +M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
+ G P Y +I K GK + AL L+DEM PN + ++ + G L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
A S + +G Y +++ +A SG I+ A++L+ + G+ P ++T+ L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
+ + + A KIL +K G + V + LM Y G+ R M + GI
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 532 RTNNFIIRQLF---------ESC---MKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
N +F E+C ++ ++E K L + D I Y +I+ +
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 580 LVR 582
L R
Sbjct: 630 LCR 632
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 11/350 (3%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
KK++D + T++YNS++ F K +++Y+ ++ + TY ++ L +
Sbjct: 147 LKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEIKDK----NEHTYSTVVDGLCR 199
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+L+ A + + + P + F S++ K G +D A + G P
Sbjct: 200 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 259
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ LI G + AL L +M G P+ Y ++ + G + A DM
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR-PGLSTYTVLLTLLANKKLV 482
G P TY LL G ID + L M + G + +V+L+ L +
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 483 DVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
D A + +MKA G S D+ A S V+ K G D+AL M I N+ L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 542 FESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR--CQEEKNE 589
+ G+ A+ LL++ ++S +D++LY ++ + C EE E
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 16/305 (5%)
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCF 244
C VML GL ++ D LF++M D + LVA + VI L K K +++ +
Sbjct: 366 CSVML-SGLCKTGRIDEALSLFNQMKADGLSPD---LVAYSIVIHGLCKLGKFDMALWLY 421
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++ D ++ T+ +L+ KG+ +A + +S+ + LD Y ++I AKS
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
G ++ A +LF+ + G P + F SL+ K + A K+ ++ +G P Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK------------L 412
+L+++Y G ++ L EMK G P Y+++ + + K
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+ DME G P TY +++ + A M + L +TY +L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 473 LTLLA 477
+ L
Sbjct: 662 IDSLC 666
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 179/435 (41%), Gaps = 36/435 (8%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKL 237
SP Y +L G + + D +L +M+ G NS ++ C+ ++ L K ++
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS----IIPCSVMLSGLCKTGRI 379
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+ + F +++ G D Y+ +I G A +Y+ M L +S T+ +
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L + G L A L + G + ++ ++D K+G ++ A+++ + G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P + SLI Y K+ + A ++ D +K+ G P+ YT +++++A G
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 418 AFSDMEKAGFLPTPSTYACLLE------MHAASGQI------DHAMKLYNSMTNAGLRPG 465
+M+ G PT TY+ + + H + + + M + G+ P
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS------DVLMVYIKEGSVDLA 519
TY ++ L K + A L MK+ ++D +++ D L VY G + A
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSR--NLDASSATYNILIDSLCVY---GYIRKA 674
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
++ + + + F L ++ G E A L ++ V + Y++++
Sbjct: 675 DSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINR 734
Query: 580 LVRCQEEKNERHLMS 594
L R RHLM+
Sbjct: 735 LCR-------RHLMN 742
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 18/363 (4%)
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
AE LE++ + G + D+ TYN L F G+ A+E+ M D T
Sbjct: 274 AEALELA----SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS-LVDSMGKAGRLDSAMKVHMEM 352
Y +++ + G +D L ++M RGF I S ++ + K GR+D A+ + +M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
+ G P Y +I K GK + AL L+DEM PN + ++ + G L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
A S + +G Y +++ +A SG I+ A++L+ + G+ P ++T+ L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
+ + + A KIL +K G + V + LM Y G+ R M + GI
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 532 RTNNFIIRQLF---------ESC---MKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
N +F E+C ++ ++E K L + D I Y +I+ +
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQY 629
Query: 580 LVR 582
L R
Sbjct: 630 LCR 632
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 11/350 (3%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
KK++D + T++YNS++ F K +++Y+ ++ + TY ++ L +
Sbjct: 147 LKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEIKDK----NEHTYSTVVDGLCR 199
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+L+ A + + + P + F S++ K G +D A + G P
Sbjct: 200 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYS 259
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ LI G + AL L +M G P+ Y ++ + G + A DM
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR-PGLSTYTVLLTLLANKKLV 482
G P TY LL G ID + L M + G + +V+L+ L +
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 483 DVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
D A + +MKA G S D+ A S V+ K G D+AL M I N+ L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 542 FESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR--CQEEKNE 589
+ G+ A+ LL++ ++S +D++LY ++ + C EE E
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 16/305 (5%)
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCF 244
C VML GL ++ D LF++M D + LVA + VI L K K +++ +
Sbjct: 366 CSVML-SGLCKTGRIDEALSLFNQMKADGLSPD---LVAYSIVIHGLCKLGKFDMALWLY 421
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++ D ++ T+ +L+ KG+ +A + +S+ + LD Y ++I AKS
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
G ++ A +LF+ + G P + F SL+ K + A K+ ++ +G P Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK------------L 412
+L+++Y G ++ L EMK G P Y+++ + + K
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+ DME G P TY +++ + A M + L +TY +L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 473 LTLLA 477
+ L
Sbjct: 662 IDSLC 666
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 179/435 (41%), Gaps = 36/435 (8%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKAEKL 237
SP Y +L G + + D +L +M+ G NS ++ C+ ++ L K ++
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS----IIPCSVMLSGLCKTGRI 379
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
+ + F +++ G D Y+ +I G A +Y+ M L +S T+ +
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ L + G L A L + G + ++ ++D K+G ++ A+++ + G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P + SLI Y K+ + A ++ D +K+ G P+ YT +++++A G
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 418 AFSDMEKAGFLPTPSTYACLLE------MHAASGQI------DHAMKLYNSMTNAGLRPG 465
+M+ G PT TY+ + + H + + + M + G+ P
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS------DVLMVYIKEGSVDLA 519
TY ++ L K + A L MK+ ++D +++ D L VY G + A
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSR--NLDASSATYNILIDSLCVY---GYIRKA 674
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
++ + + + F L ++ G E A L ++ V + Y++++
Sbjct: 675 DSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINR 734
Query: 580 LVRCQEEKNERHLMS 594
L R RHLM+
Sbjct: 735 LCR-------RHLMN 742
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 171/397 (43%), Gaps = 46/397 (11%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
R++ P Y L G ++ + V LFDEM+ +SG+S
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML----HSGLS--------------- 115
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI-YESMEKTSCLLDSST 293
D +YN+L++ + G +AF+I +E + + T
Sbjct: 116 -------------------PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDT 156
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
Y +++ L KSG D A +LF+ +K R +P L + L++ + K+ R+ S + E++
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
GY P Y ++++ Y K+ ++E L+L+ +MK GY + V+ + K+G+ +
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 414 IAMSAFSDMEKAGFLPTP-STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
A ++ ++G +Y LL ++ G +D L + GL+P T+T++
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGI 531
+ L N A K L + MG V + L+ + K G VD R +R S +
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVD---RAMRLFASMEV 392
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
R + F + + K G A LL + N K+
Sbjct: 393 R-DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 4/283 (1%)
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
+ +L K L+ A L + G P + + +L+ + +D A V MR G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
P T Y SLI K+ L L+L+DEM +G P+ Y ++ + K G+ A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 418 AF-SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
D+ AG +P TY LL+ SG D+A++L+ + + ++P L TY +L+ L
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGL 198
Query: 477 ANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
+ V ++ E+K GY+ + VT + +L +Y K ++ L+ M G +
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKV-DLILYTSIL 577
F + + +K+G E A + V S + D++ Y ++L
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 5/312 (1%)
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
L D TY +I + +D A+ + + M+ G P + + SL+ K L+ ++
Sbjct: 45 LPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQ 104
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR-LWDEMKIAGYRPNFALYTLVIESH 406
+ EM G P Y +L+ Y K G+ A + L +++ +AG P Y +++++
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
KSG D A+ F + K+ P TY L+ S ++ + + +G P
Sbjct: 165 CKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS-DVLMVYIKEGSVDLALRWLRF 525
TYT +L + K ++ ++ L+MK GY+ D A+ V+ IK G + A +
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Query: 526 MGSSGIRTNNFI-IRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQ 584
+ SG R+ + + L K G ++ LLE K D +T I+ L+
Sbjct: 284 LVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Query: 585 EEKN-ERHLMSI 595
E+HL I
Sbjct: 344 NTGGAEKHLACI 355
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 10/278 (3%)
Query: 241 FCCFKKIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
FC +I DA G + + YN+LI G A E+ MEK D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY ++ L SGR A ++ ++M R P + F +L+D K G LD A +++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
EM P Y S+I G+L A + +D M G PN Y +I K
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+D M F M GF TY L+ + G++ A+ ++ M + + P + T+
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+LL L ++ A +M+ + + A ++++
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 1/312 (0%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N +I L K +L ++ +++ G D TYN+L+T G A +
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K S D T+ +I K G LD A +L++EM P + S+++ + G
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
RL A K M G P Y +LI + K ++ ++L+ M G+ + Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I + + GKL +A+ F M P T+ LL +G+I+ A+ ++ M +
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLA 519
G+ Y +++ L V+ A ++ + G D ++++ + K G A
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 520 LRWLRFMGSSGI 531
+R M GI
Sbjct: 476 DELIRRMKEEGI 487
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 3/330 (0%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
+S Y P+ Y L DGL ++ + + L +EM + V V N ++ L +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV---VTYNTLLTGLCYSG 225
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
+ + + + D T+ +LI +F+ +G +A E+Y+ M ++S ++ TY
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I L GRL A K F M +G P + + +L+ K +D MK+ M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
G+ Y +LI Y + GKL AL ++ M P+ + +++ +G+++ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
+ F DM ++ Y ++ + +++ A +L+ + G++P TYT+++
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASD 505
L A +++ MK G + A D
Sbjct: 466 LCKNGPRREADELIRRMKEEGIICQMNAED 495
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 165/400 (41%), Gaps = 6/400 (1%)
Query: 192 GLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG 251
G S F+ LF EMV + +V R++ A + E +K++ G
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQP---LPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
D ++ LI F A + M K T+ ++ R+ AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
L M G+ P + ++ +L+D + K G L+ A+++ EM G Y +L+
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
SG+ A R+ +M P+ +T +I+ K G LD A + +M ++ P
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
TY ++ G++ A K ++ M + G P + TY L++ ++VD K+
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 492 MKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
M G++ D+ T + ++ Y + G + +AL +M S + + L +G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 551 YESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNER 590
ESA + S + ++ Y ++ L C+ +K E+
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGL--CKADKVEK 439
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 130/319 (40%), Gaps = 5/319 (1%)
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRG 321
L T FL+ AF ++ M + L + ++ A R + Q+M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 322 FRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETAL 381
L F L+ + RL A+ V +M GY P + SL+ + ++ A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 382 RLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMH 441
L M +GY PN +Y +I+ K+G+L+IA+ ++MEK G TY LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 442 AASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD- 500
SG+ A ++ M + P + T+T L+ + + +D A ++ EM + SVD
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--IQSSVDP 279
Query: 501 --VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
VT + ++ G + A + M S G N L K + + L
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 559 ETYVNSAAKVDLILYTSIL 577
+ D+ Y +++
Sbjct: 340 QRMSCEGFNADIFTYNTLI 358
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 5/283 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
DA L KR +P + L D + + D Q L+ EM+ S + V
Sbjct: 229 DAARMLRDMMKRS--INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN---VT 283
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
N +I L +L + F + GC + TYN+LI+ F + + ++++ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
D TY +I + G+L A +F M R P + L+ + G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
SA+ +MR Y +I K+ K+E A L+ + + G +P+ YT++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
K+G A M++ G + + LE H++S +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK 506
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 45/357 (12%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
L +FRW ++Q WY P + Y ++
Sbjct: 117 LEVFRWMQKQRWYIPDNGVY--------------------------------------SK 138
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE-IYESMEKT 285
+I + K + ++ F +++++GC+ D YN+LIT L+ KA E + ++K
Sbjct: 139 LISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM 198
Query: 286 S----CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
C + TY +++ A+SG++D LF+++ P + F ++D+ GK G
Sbjct: 199 KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
+ V MR +P + LI+SY K + E + + + + +P +
Sbjct: 259 IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNS 318
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I ++ K+ +D A F M ++P+ TY C++ M+ G + A +++ + +
Sbjct: 319 MIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESD 378
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDL 518
ST +L + L A K+ A + V AS +Y D+
Sbjct: 379 RVLKASTLNAMLEVYCRNGLYIEADKLF--HNASAFRVHPDASTYKFLYKAYTKADM 433
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 42/305 (13%)
Query: 296 LMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
L+ L KS + ++F+ M K R + P +++ L+ MGK G+ AM + EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 355 FGYRPPPTIYVSLIESYV----KSGKLETALRLWDEMK-IAGYRPNFALYTLVIESHAKS 409
G RP ++Y +LI +++ K+ LE D+MK I +PN Y +++ + A+S
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GK+D + F D++ + P T+ +++ + +G I + M + +P + T+
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 470 TVLLTLLANK-----------------------------------KLVDVAAKILLEMKA 494
VL+ K +++D A + +M
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 495 MGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
M Y +T ++M+Y GSV A +G S + + E ++GLY
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401
Query: 554 AKPLL 558
A L
Sbjct: 402 ADKLF 406
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAG-FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
L+ E KS K + F M+K ++P Y+ L+ + GQ AM L++ M N
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 460 AGLRPGLSTYTVLLTL-LANKKLVDVAAKI---LLEMKAMGYSVD--VTASDVLMVYIKE 513
+G RP S Y L+T L + K+ L +MK + VT + +L + +
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G VD + + S + + + + ++ K+G+ + + +L ++ K D+I +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 574 TSILAHLVRCQE-EKNERHLMSIL 596
++ + QE EK E+ S++
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLM 305
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 169/396 (42%), Gaps = 15/396 (3%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNR 226
F W K Q Y PS Y ++ + + F EM VG ++ VAC
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDA-----VACGT 228
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
++ A+ + +K +Q+ + T YN +++ K K +++ M +
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+ TY L++ + AK G + A K F EMK GF P ++S++ KAG + A+
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
++ +MR G P +++ Y K+ AL L+ +M+ + + L+I +
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
K G A S F + E+ L TY + ++H SG + A+ + M +
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFM 526
Y V+L A + VD A + + G + +D+L +Y + ++L + F+
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTR---LNLGEKAKGFI 525
Query: 527 GSSGIRTNNFIIRQLFESCM----KSGLYESAKPLL 558
+ +F I +L+++ M K G+ A+ L+
Sbjct: 526 KQIMVDQVHFDI-ELYKTAMRVYCKEGMVAEAQDLI 560
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 4/328 (1%)
Query: 211 GDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
G+S G S++ + +I + LE ++ F + + GC T + L+ N+G
Sbjct: 697 GESKTPGKSVIRS---MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+A I + + + LD+ Y +I + ++G+L A ++++ M G + +
Sbjct: 754 KHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+++ G+ +LD A+++ R G IY ++I Y K GK+ AL L+ EM+
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK 873
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G +P Y ++++ A S ME+ G STY L++++A S Q A
Sbjct: 874 GIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEA 933
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMV 509
K + G+ S ++ LL+ L +++ A + +M G S D +L
Sbjct: 934 EKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Query: 510 YIKEGSVDLALRWLRFMGSSGIRTNNFI 537
Y+ G + + + M S + + F+
Sbjct: 994 YMTCGDAEKGILFYEKMIRSSVEDDRFV 1021
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 5/261 (1%)
Query: 205 LFDEMVGDSANSG-VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLI 263
LF E + G V++ + N + E +S C +K ++DT YN+LI
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK----NIELDTVGYNTLI 781
Query: 264 TLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR 323
L G A EIYE M + TY MI + +LD A ++F + G
Sbjct: 782 KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
I+ +++ GK G++ A+ + EM+ G +P Y +++ S L
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
M+ G + + Y +I+ +A+S + A + +++ G + S ++ LL
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 961
Query: 444 SGQIDHAMKLYNSMTNAGLRP 464
+G ++ A + Y M+ AG+ P
Sbjct: 962 AGMMEEAERTYCKMSEAGISP 982
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
W +++++ YRP+ +YT+V+ + + GK+ +A F +M + G P +L +A
Sbjct: 177 WMKLQLS-YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYAR 235
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV-DVT 502
G+ + Y ++ + S Y +L+ L K + LEM G + T
Sbjct: 236 WGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFT 295
Query: 503 ASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ V+ Y K+G + AL+ M S G + +K+G +E A L E
Sbjct: 296 YTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 150/374 (40%), Gaps = 44/374 (11%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
L +FRW ++Q WY P + Y ++
Sbjct: 117 LEVFRWMQKQRWYIPDNGVY--------------------------------------SK 138
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE-IYESMEKT 285
+I + K + ++ F +++++GC+ D YN+LIT L+ KA E + ++K
Sbjct: 139 LISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM 198
Query: 286 S----CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
C + TY +++ A+SG++D LF+++ P + F ++D+ GK G
Sbjct: 199 KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
+ V MR +P + LI+SY K + E + + + + +P +
Sbjct: 259 IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNS 318
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I ++ K+ +D A F M ++P+ TY C++ M+ G + A +++ + +
Sbjct: 319 MIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESD 378
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLAL 520
ST +L + L A K+ A D + L Y K +
Sbjct: 379 RVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQ 438
Query: 521 RWLRFMGSSGIRTN 534
++ M GI N
Sbjct: 439 ILMKKMEKDGIVPN 452
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 42/307 (13%)
Query: 296 LMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
L+ L KS + ++F+ M K R + P +++ L+ MGK G+ AM + EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 355 FGYRPPPTIYVSLIESYV----KSGKLETALRLWDEMK-IAGYRPNFALYTLVIESHAKS 409
G RP ++Y +LI +++ K+ LE D+MK I +PN Y +++ + A+S
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GK+D + F D++ + P T+ +++ + +G I + M + +P + T+
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 470 TVLLTLLANK-----------------------------------KLVDVAAKILLEMKA 494
VL+ K +++D A + +M
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 495 MGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
M Y +T ++M+Y GSV A +G S + + E ++GLY
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401
Query: 554 AKPLLET 560
A L
Sbjct: 402 ADKLFHN 408
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAG-FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
L+ E KS K + F M+K ++P Y+ L+ + GQ AM L++ M N
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 460 AGLRPGLSTYTVLLTL-LANKKLVDVAAKI---LLEMKAMGYSVD--VTASDVLMVYIKE 513
+G RP S Y L+T L + K+ L +MK + VT + +L + +
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
G VD + + S + + + + ++ K+G+ + + +L ++ K D+I +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 574 TSILAHLVRCQE-EKNERHLMSIL 596
++ + QE EK E+ S++
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLM 305
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 45/402 (11%)
Query: 161 NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL 220
ND L+L W ++ Y+PS Y ++ + R++ FD LFDEM
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM----------- 181
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+ D TY++LIT F +G+ A +
Sbjct: 182 ---------------------------RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
ME+ D Y +I + A +F +K G P L + S+++ GKA
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
A + EM G P Y +L+ YV++ K AL ++ EMK +
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 401 LVIESHAKSGKLDIAMSA---FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
++I+ + G+LD+ A F + K P +Y +L ++ + A+ L+ M
Sbjct: 335 IMIDVY---GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSV 516
+ + TY ++ + + A ++ EM++ G + +T S ++ ++ K G +
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
D A + + SSG+ + + + + + + GL AK LL
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 131/276 (47%), Gaps = 4/276 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L CN +I + + ++ + F ++ + + +YN+++ ++ L +A ++
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M++ + TY MI K+ + A L QEM+ RG P +++++ GKAG
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+LD A + ++R G +Y ++I +Y + G + A RL E+K+ P T
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++ AK+G+ + A F ++G + S + C++ +++ + + + ++++ M A
Sbjct: 510 IL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
G P + ++L ++ + A + EM+ G
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 145/326 (44%), Gaps = 7/326 (2%)
Query: 264 TLFLNKGLPYKAFEI----YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
+ L L K F+I ++ M + + D TY +I + K G D+A Q+M+
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
L ++++L++ + A+ + ++ G P Y S+I Y K+
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFRE 278
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A L EM AG PN Y+ ++ + ++ K A+S F++M++ +T +++
Sbjct: 279 ARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID 338
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI--LLEMKAMGY 497
++ + A +L+ S+ + P + +Y +L + +L A + L++ K +
Sbjct: 339 VYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQ 398
Query: 498 SVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
+V VT + ++ +Y K + A ++ M S GI N + K+G + A L
Sbjct: 399 NV-VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 558 LETYVNSAAKVDLILYTSILAHLVRC 583
+ +S ++D +LY +++ R
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERV 483
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
LVA N +I KA+ + K++ +AG +T +Y++L+++++ +A ++
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M++ +C LD +T +MI + + A +LF ++ P + + +++ G+A
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
A+ + M+ Y ++I+ Y K+ + E A L EM+ G PN Y+
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I K+GKLD A + F + +G Y ++ + G + HA +L + +
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 499
Query: 461 GLRPGLSTYTVL 472
P + T+L
Sbjct: 500 DNIPRETAITIL 511
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 175/418 (41%), Gaps = 34/418 (8%)
Query: 110 DVKKPFMNALAVAKIVEVV--KRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGL 167
D +K ++ +AK V + +R +W L + F + + LK N+ L
Sbjct: 39 DEQKSAVSYTEMAKTVSTIMRERQRWQQTLVSDFPSFDFADPL-FFGELLKSQNNVLFSL 97
Query: 168 SLFRWAKRQSWYSPSDDCYVMLFDGLNRSR---------DFDG-----------VQLLFD 207
FRW Y+P +LF L + D G V+ L +
Sbjct: 98 WFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSE 157
Query: 208 EMVGDSA--------NSGVSL-LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTET 258
E + + A + G+S +V CN V+ KA KL+ + K++ ++ + D+E
Sbjct: 158 EGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES--EFDSER 215
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
LI + G + +E+ + K Y +I + G ++ M
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
P + I+ ++ + + A + ++ GY P +Y ++I + + G L
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+A +LW EM G RPN Y ++I H K G++ + + +++M + G+ T + ++
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+ + G+ D A +++ +M+ G+ P TY L+ + V+ K+ E+KA+G
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 146/356 (41%), Gaps = 13/356 (3%)
Query: 141 LDKLQFVPNMTHVTQALKVVNDG---DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR 197
LD F P T + Q +K +++ + + ++ K S C +L G ++R
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLL-GCLKAR 194
Query: 198 DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
D L EMV +S + C +I+ L + + K+ G
Sbjct: 195 KLDRFWELHKEMVESEFDSE---RIRC--LIRALCDGGDVSEGYELLKQGLKQGLDPGQY 249
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
Y LI+ F G E+ +M + Y+ +I L + + A+ +F+ +
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
K +G+ P ++ +++ + G L SA K+ EM G RP Y +I + K G++
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
++EM GY +I+ GK D A F +M + G P TY L
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD-VAAKILLEM 492
++ +++ +KLY + GL+P Y L+ N K+ D VA + LE+
Sbjct: 430 IKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR---NLKMSDSVATSLNLEI 482
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 142/333 (42%), Gaps = 5/333 (1%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
D + +F K +S P+ + L G + + L D M+ D
Sbjct: 406 DQAMKIFEKMK-ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR--T 462
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE-IYESM 282
CN ++Q K+E ++ K+Q G K D T+N+L + G A + I M
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRM 522
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ T ++ + G+++ A + F MK G P L +F SL+ +
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D +V M FG +P + +L+ ++ G ++ ++ +M G P+ ++++
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN-AG 461
+ +A++G+ + A + M K G P Y ++ ++G++ AM++Y M G
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
L P L+TY L+ K A ++L +M+
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEG 735
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 158/360 (43%), Gaps = 7/360 (1%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ PS Y L L R + F + L ++ + L N +I +++ L+
Sbjct: 350 HKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF---NAIINASSESGNLD 406
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELM 297
+ F+K++++GCK T+N+LI + G ++ + + M + L + T ++
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM-EMRGFG 356
+ +++ A+ + +M+ G +P + F +L + + G +A + + M
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+P +++ Y + GK+E ALR + MK G PN ++ +I+ +D
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
ME+ G P T++ L+ ++ G + ++Y M G+ P + +++L
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALR-WLRFMGSSGIRTN 534
A + A +IL +M+ G +V + ++ + G + A++ + + G G+ N
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 148/347 (42%), Gaps = 3/347 (0%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F + + G K TY +L+T + + + +EK D+ + +I ++
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK-VHMEMRGFGYRPPPT 362
SG LD A K+F++MK G +P + F +L+ GK G+L+ + + + M +R +P
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA-FSD 421
L++++ K+E A + +M+ G +P+ + + +++A+ G A
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
M P T ++ + G+++ A++ + M G+ P L + L+ N
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
+D +++ M+ G DV LM + G + M GI +
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
L + ++G E A+ +L + ++++YT I++ E K
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
C ++ + K+E + F ++++ G + +NSLI FLN E+ + M
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
E+ D T+ ++ + G + +++ +M G P ++ F+ L +AG
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM-KIAGYRPNFALYTL 401
+ A ++ +MR FG RP IY +I + +G+++ A++++ +M I G PN Y
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
+I ++ + A DME +PT T
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 163/385 (42%), Gaps = 5/385 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ A+ ++ + F ++Q CK D ETY++LI G A + + M +
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ STY +I SG A ++ ++M G P L + ++V S K+GR S
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL-VTHNIVLSAYKSGRQYS 133
Query: 345 AMKVHME-MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTL 401
+ E M+G RP T + +I K G+ AL L++ M K A RP+ +T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
++ ++ G+++ + F M G P +Y L+ +A G A+ + + G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLAL 520
+ P + +YT LL + A ++ L M+ +V + L+ Y G + A+
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
R M GI+ N + L +C +S + +L + ++ Y S +
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 581 VRCQEEKNERHLMSILGATKHKAHS 605
+ E + L + K KA S
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADS 398
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
KIQ C + YN +I L +A ++ M+K SC D+ TY+ +I ++G
Sbjct: 2 KIQKNYCA-RNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
+ A L +M P + + +L+++ G +G A++V +M G P +
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM--E 423
++ +Y + AL ++ MK A RP+ + ++I +K G+ A+ F+ M +
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+A P T+ ++ +++ G+I++ ++ +M GL+P + +Y L+ A +
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 484 VAAKILLEMKAMGYSVDVTASDVLM 508
A +L ++K G DV + L+
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLL 265
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 1/300 (0%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
I+ G D +Y L+ + P KA E++ M K + TY +I +G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
L A ++F++M+ G +P + +L+ + ++ + + V + G Y S
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
I SY+ + +LE A+ L+ M+ + + +T++I + K A+S +ME
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
T Y+ +L ++ GQ+ A ++N M AG P + YT +L + A
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 488
Query: 487 KILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
++ LEM+A G D A LM + K G + M I + ++F +C
Sbjct: 489 ELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 548
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 4/253 (1%)
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
++K C + Y +MI A+ +D A LF EM+ +P + +L+++ G+AG+
Sbjct: 3 IQKNYCARND-IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 61
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
AM + +M P + Y +LI + SG AL + +M G P+ + +
Sbjct: 62 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 121
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM--TN 459
V+ ++ + A+S F M+ A P +T+ ++ + GQ A+ L+NSM
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDL 518
A RP + T+T ++ L + K ++ + M A G ++ + + LM Y G
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 519 ALRWLRFMGSSGI 531
AL L + +GI
Sbjct: 242 ALSVLGDIKQNGI 254
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 136/300 (45%), Gaps = 7/300 (2%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQD--AGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I L+K + + F +++ A C+ D T+ S++ L+ KG ++E+M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ +Y ++ A G A + ++K G P + + L++S G++ +
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A +V + MR +P Y +LI++Y +G L A+ ++ +M+ G +PN +
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ + ++S K + S + G + Y + + + +++ A+ LY SM +
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA---SDVLMVYIKEGSVDLA 519
+ T+T+L++ A L EM+ + S+ +T S VL Y K+G V A
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEA 452
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 134/375 (35%), Gaps = 81/375 (21%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGV----SLLVACNRVIQY 230
R+ P+ Y L D + +F +M D V +LL AC+R
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR---- 340
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
+K+ V Q G ++T YNS I ++N KA +Y+SM K D
Sbjct: 341 --SKKKVNVD-TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 291 SSTYELMIPN-----------------------------------LAKSGRLDAAFKLFQ 315
S T+ ++I +K G++ A +F
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 316 EMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG 375
+MK G P + + S++ + + + A ++ +EM G P +L+ ++ K G
Sbjct: 458 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Query: 376 KLETALRLWDEMK---------------------------------IAGYRPNFA--LYT 400
+ L D M+ + Y P+ + L
Sbjct: 518 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTN 577
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++ KSGK++ M F + +G TYA LLE A G +++ M+ A
Sbjct: 578 QMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 637
Query: 461 GLRPGLSTYTVLLTL 475
G++P Y +++
Sbjct: 638 GIQPSNQMYRDIISF 652
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 4/305 (1%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A E E M L+++ L I G D ++L MK G RP + F +D
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ KAG L A V +++ FG S+I+ + K GK E A++L ++ RP
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RP 371
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
N +Y+ + + +G + A + F ++ + G LP Y +++ + G+ D A + +
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
++ +G P L+T T+L+ + + A + MK G +D VT ++++ Y K
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
++ + M S+GI + L S + G + A ++ + + +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 574 TSILA 578
T ++
Sbjct: 552 TDVIG 556
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
DS + +I K G+ + A KL + RP + +++S + ++ G + A +
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
E+ G P Y ++I+ Y G+ + A + + + +G P+ T++I + ++
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G + A S F +M+ G TY L+ + + Q++ +L + M +AG+ P ++TY
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGS 528
+L+ + + +D A +I+ E+ G+ A +DV+ + K G A +M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
++ + L K+ E A L +++ K D++LY +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 181 PSDDCYVMLFDG---LNRS-RDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
P CY + DG L R+ + F L S + L+ AC+R ++ AE
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR-FGSISDAES 464
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ F+ ++ G K+D TYN+L+ + K FE+ + M D +TY +
Sbjct: 465 V------FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I ++ G +D A ++ E+ RGF P F ++ K G A + M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+P +L+ Y K+ ++E A+ L++++ AG +P+ LY +I + G ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 417 SAFSDMEKAGFLPTPSTYACLL 438
M + G LP ST+ L+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALV 660
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
Y+S ++ + G +A I++ + + L D Y MI GR D AF+ F +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G P L L+ + + G + A V M+ G + Y +L+ Y K+ +L
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
L DEM+ AG P+ A Y ++I S G +D A S++ + GF+P+ + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ + G A L+ M + ++P + T + LL + ++ A + ++ G
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 498 SVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
DV + L+ Y G ++ A + M G+ N
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A ++ +M+ LD TY ++ K+ +L+ F+L EM+ G P + + L+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
SM G +D A ++ E+ G+ P + +I + K G + A LW M +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ + ++ + K+ +++ A+ F+ + AG P Y L+ + + G I+ A +L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLV--DVAAKILLE 491
M G+ P ST+ L+ L K+ V + A +LLE
Sbjct: 642 GLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLE 680
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 4/287 (1%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
+ + ++I + +++ A KL ++ G P + SL+ + + L+ A +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
M G + I Y G + L MK G RP+ +T+ I+ K+G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV 471
L A S ++ G + + +++ G+ + A+KL +S LRP + Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSS 378
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
L+ + + + A+ I E+ +G D V + ++ Y G D A ++ + SG
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ L +C + G A+ + K+D++ Y +++
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 4/305 (1%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A E E M L+++ L I G D ++L MK G RP + F +D
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
+ KAG L A V +++ FG S+I+ + K GK E A++L ++ RP
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RP 371
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
N +Y+ + + +G + A + F ++ + G LP Y +++ + G+ D A + +
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
++ +G P L+T T+L+ + + A + MK G +D VT ++++ Y K
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILY 573
++ + M S+GI + L S + G + A ++ + + +
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 574 TSILA 578
T ++
Sbjct: 552 TDVIG 556
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
DS + +I K G+ + A KL + RP + +++S + ++ G + A +
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
E+ G P Y ++I+ Y G+ + A + + + +G P+ T++I + ++
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G + A S F +M+ G TY L+ + + Q++ +L + M +AG+ P ++TY
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGS 528
+L+ + + +D A +I+ E+ G+ A +DV+ + K G A +M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
++ + L K+ E A L +++ K D++LY +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 181 PSDDCYVMLFDG---LNRS-RDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEK 236
P CY + DG L R+ + F L S + L+ AC+R ++ AE
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR-FGSISDAES 464
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
+ F+ ++ G K+D TYN+L+ + K FE+ + M D +TY +
Sbjct: 465 V------FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I ++ G +D A ++ E+ RGF P F ++ K G A + M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+P +L+ Y K+ ++E A+ L++++ AG +P+ LY +I + G ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 417 SAFSDMEKAGFLPTPSTYACLL 438
M + G LP ST+ L+
Sbjct: 639 ELIGLMVQRGMLPNESTHHALV 660
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
Y+S ++ + G +A I++ + + L D Y MI GR D AF+ F +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G P L L+ + + G + A V M+ G + Y +L+ Y K+ +L
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
L DEM+ AG P+ A Y ++I S G +D A S++ + GF+P+ + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ + G A L+ M + ++P + T + LL + ++ A + ++ G
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 498 SVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
DV + L+ Y G ++ A + M G+ N
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A ++ +M+ LD TY ++ K+ +L+ F+L EM+ G P + + L+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 335 SMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
SM G +D A ++ E+ G+ P + +I + K G + A LW M +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ + ++ + K+ +++ A+ F+ + AG P Y L+ + + G I+ A +L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLV--DVAAKILLE 491
M G+ P ST+ L+ L K+ V + A +LLE
Sbjct: 642 GLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLE 680
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 4/287 (1%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
+ + ++I + +++ A KL ++ G P + SL+ + + L+ A +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
M G + I Y G + L MK G RP+ +T+ I+ K+G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 412 LDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTV 471
L A S ++ G + + +++ G+ + A+KL +S LRP + Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSS 378
Query: 472 LLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSG 530
L+ + + + A+ I E+ +G D V + ++ Y G D A ++ + SG
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ L +C + G A+ + K+D++ Y +++
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 189/458 (41%), Gaps = 57/458 (12%)
Query: 175 RQSWYSPSDDCYVMLFDG-------LNRSRDFDGVQLLFDEMVGDS-ANSGVSLLVACNR 226
++ + SPS++ + + D L R++ + +Q L + ++ S + +S L++
Sbjct: 24 KRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS--- 80
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE----IYESM 282
V+ AK+ ++ +F F+ ++ + Y L L L + + E +Y+ M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVY--LYNLLLESCIKERRVEFVSWLYKDM 138
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ T+ L+I L S +DAA +LF EM +G +P F LV KAG
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D +++ M FG P IY +++ S+ + G+ + + ++ ++M+ G P+ +
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFL----PTPSTYACLLEMHAASGQIDHAMKLYNS-- 456
I + K GK+ A FSDME +L P TY +L+ G ++ A L+ S
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 457 ---------------------------------MTNAGLRPGLSTYTVLLTLLANKKLVD 483
MT+ G+ P + +Y +L+ L ++
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 484 VAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
A I+ MK G D VT +L Y G VD A L+ M + N + L
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
S K G A+ LL +D + I+ L
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 27/407 (6%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y ++ G + + + LF+ + N ++ L + N +Q L + K +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESI---RENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
K++ D G +YN L+ G+ A I M++ D+ TY ++
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
G++DAA L QEM P L+ S+ K GR+ A ++ +M GY
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYR-----------------------PNFA 397
+++ SG+L+ A+ + M++ G P+
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
Y+ ++ K+G+ A + F++M P Y + G+I A ++ M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGS-V 516
G L TY L+ L K + ++ EMK G S ++ + + Y+ EG V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVN 563
+ A L M I N F + L E+ K ++ A+ + ET V+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
C D TY++L+ G +A ++ M DS Y + I + K G++ +AF
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
++ ++M+ +G L + SL+ +G ++ + EM+ G P Y + I+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-----EKAG 426
+ K+E A L DEM PN + +IE+ K D+A F +K G
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
Y+ + A+GQ+ A +L ++ + G G Y L+ L K ++VA+
Sbjct: 700 L------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 487 KILLEMKAMGYSVDVTA 503
IL +M GY D A
Sbjct: 754 GILHKMIDRGYGFDPAA 770
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 144/360 (40%), Gaps = 34/360 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TYN ++ F GL A ++ES+ + L +Y + + L + G+ A + ++M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+G P + + L+D + K G L A + M+ G P Y L+ Y GK+
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A L EM PN +++ S K G++ A M + G+ T +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 438 LEMHAASGQIDHAMKLYNSMTNAG-----------------------LRPGLSTYTVLLT 474
++ SG++D A+++ M G P L TY+ LL
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSG--- 530
L A + EM D A ++ + + K+G + A R L+ M G
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 531 -IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
+ T N +I L +K+ ++E L++ ++ Y + + +L C+ EK E
Sbjct: 593 SLETYNSLILGLG---IKNQIFE-IHGLMDEMKEKGISPNICTYNTAIQYL--CEGEKVE 646
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 4/276 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ + + + S +K+++ G D T+NS I+ +G A I+ ME
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 285 TSCL----LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
L +S TY LM+ K G L+ A LF+ ++ L + + + + G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ A V +M G P Y L++ K G L A + MK G P+ Y
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++ + GK+D A S +M + LP T LL G+I A +L M
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
G T +++ L +D A +I+ M+ G
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC-NRVIQYLAKAEKLEVSFCCF 244
Y L GL + L DEM G+S + N IQYL + EK+E +
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEM----KEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++ + ++ LI F A E++E+ + C Y LM L +
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA-VSICGQKEGLYSLMFNELLAA 711
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
G+L A +L + + RGF G ++ LV+S+ K L+ A + +M GY P
Sbjct: 712 GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAAL 771
Query: 365 VSLIESYVKSGKLETALRLWDEM 387
+ +I+ K G + A D+M
Sbjct: 772 MPVIDGLGKMGNKKEANSFADKM 794
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSA--NSGV----SL 220
++F WA + D ++ + L + FD + L + + +SG+ L
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 221 LVACNRVIQYLAKAEKLEVSFCCF---KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
I +A K++ + F K++ D K + YN+++ ++ G KA
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALR 214
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
Y+ M K D T+ ++I +S + D A LF+EMK +G P + F +L+
Sbjct: 215 FYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL 274
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
+G+++ +K+ EM G R L++ + G+++ A L ++ P+
Sbjct: 275 SSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC--LLEMHAASGQIDHAMKLYN 455
Y ++E K AM ++ K G TP AC L+E SG+ + A
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKG--QTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEG 514
M NAG+ P T+ +LL L + A ++ L + GY D T VL+ + KEG
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 3/314 (0%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
D L F KR P+ Y + +G +S D D + M + A V
Sbjct: 174 DYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTF-- 231
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
N +I ++ K +++ F+++++ GC+ + ++N+LI FL+ G + ++ M
Sbjct: 232 -NILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+ C +T E+++ L + GR+D A L ++ + P + SLV+ + +
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV 350
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
AM++ E+ G P +L+E KSG+ E A ++M AG P+ + L++
Sbjct: 351 RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL 410
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
S A G+ P +TY L+ G+ L N M + +
Sbjct: 411 RDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML 470
Query: 464 PGLSTYTVLLTLLA 477
P + TY L+ L+
Sbjct: 471 PDIFTYNRLMDGLS 484
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 5/286 (1%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D T+N+LI+ + +G ++A ++ + M D+ TY MI K R D A +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
M P + F +++D +A R+D M++ E+ G T Y +LI + +
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
L A L+ EM G P+ +++ ++ KL+ A+ F ++ + Y
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
++ ++D A L+ S+ G+ P + TY V+++ K + A + +MK
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 495 MGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
G+ D + + L+ +K G +D ++ + M S+G + F I+
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 35/381 (9%)
Query: 174 KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAK 233
K S Y S D + FD + RSR F V CN+VI +
Sbjct: 78 KSGSHYFKSLDDAIDFFDYMVRSRPF-------------------YTAVDCNKVIGVFVR 118
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
+ +V+ ++K++ ++ ++N LI F + + + + K D T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGF---------------RPGLNIFASLVDSMGK 338
+ ++ L R+ A LF M GF P + F +L++ +
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
GR+ A + +M G G Y +++ K G ++AL L +M+ +P+ +
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y+ +I+ K G A FS+M + G P TY C+++ + G+ A +L M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVD 517
+ P + T+ L++ + + A K+ EM D VT + ++ + K D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 518 LALRWLRFMGSSGIRTNNFII 538
A M S + T N II
Sbjct: 419 DAKHMFDLMASPDVVTFNTII 439
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 21/340 (6%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N +I +F+ P A +Y ME L+ ++ ++I +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
GF+P + F +L+ + R+ A+ + FGY V++G LE
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALAL------FGY-------------MVETGFLE- 209
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A+ L+D+M G P + +I G++ A + + M G TY ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
G A+ L + M ++P + Y+ ++ L A + EM G +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 500 DVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+V + ++ + G A R LR M I + L + +K G A+ L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 559 ETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGA 598
+ ++ D + Y S++ + + +H+ ++ +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 159/394 (40%), Gaps = 37/394 (9%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKK---------------------------------- 246
L AC ++ L K + + FKK
Sbjct: 168 LQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLS 227
Query: 247 -IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+++ G D TYN+LI+++ K + ++A + + ME++ + TY I ++ G
Sbjct: 228 EMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
R+ A +LF+E+K + +L+D + +D A+++ M G+ P Y
Sbjct: 288 RMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
S++ + G++ A RL EM P+ +I ++ K + A+ M ++
Sbjct: 347 SILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G +Y L+ ++++A + SM G PG +TY+ L+ N+ D
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEI 466
Query: 486 AKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
K+L E + G DV L+ I K VD A M G+ ++ I + +
Sbjct: 467 TKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
++G A L + N V+L LY SI A
Sbjct: 527 YWRTGKVTEASALFDVMYNRRLMVNLKLYKSISA 560
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 47/374 (12%)
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGV--SLLVACNRVIQYLAKAEKLEVS 240
C V+L + L + R D V +F +MV G AN V L+ AC++ KAEKL
Sbjct: 171 CTVLL-NSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD-PEKAEKL--- 225
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
++++ G D TYN+LI+++ K + ++A + + ME++ + TY I
Sbjct: 226 ---LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 301 LAKSGRLDAAFKLFQE----------------------------------MKGRGFRPGL 326
++ GR+ A +LF+E M+ RGF PG+
Sbjct: 283 FSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 327 NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
+ S++ + + GR+ A ++ EM G P +LI +Y K + +A+++ +
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
M +G + + Y +I K +L+ A M + GF P +TY+ L++ +
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASD 505
D KL GL ++ Y L+ + + VD A + M+ G D V +
Sbjct: 463 QDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTT 522
Query: 506 VLMVYIKEGSVDLA 519
+ Y + G V A
Sbjct: 523 MAYAYWRTGKVTEA 536
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 1/279 (0%)
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
Y AKA + S F++I+ G K + L+ + + L ++I++ M K +
Sbjct: 142 YYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVA 201
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
+ Y +++ +KSG + A KL EM+ +G P + + +L+ K A+ V
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
M G P Y S I + + G++ A RL+ E+K N YT +I+ + +
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRM 320
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
+D A+ ME GF P TY +L G+I A +L M+ + P T
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITC 380
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
L+ + + A K+ +M G +D+ + L+
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 2/304 (0%)
Query: 256 TETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQ 315
+ ++ L+ + G+ + ++E + +++ +L K D +K+F+
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 316 EMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG 375
+M G ++++ LV + K+G + A K+ EM G P Y +LI Y K
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 376 KLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
AL + D M+ +G PN Y I ++ G++ A F ++ K TY
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYT 311
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM 495
L++ + ID A++L M + G PG+ TY +L L + A ++L EM
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 496 GYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
D +T + ++ Y K + A++ + M SG++ + + + L K E+A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 555 KPLL 558
K L
Sbjct: 432 KEEL 435
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 2/301 (0%)
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
S + ++ AK+G ++ + +F++++ G +P L L++S+ K D+ K+
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
+M G +Y L+ + KSG E A +L EM+ G P+ Y +I + K
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
A+S ME++G P TY + + G++ A +L+ + + + TYT
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYT 311
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSS 529
L+ +D A ++ M++ G+S VT + +L ++G + A R L M
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNE 589
I +N L + K SA + + + S K+D+ Y +++ + E +N
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 590 R 590
+
Sbjct: 432 K 432
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 3/262 (1%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L DG R D D L + M + GV V N +++ L + ++ +
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGV---VTYNSILRKLCEDGRIREANRLLT 366
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
++ + D T N+LI + A ++ + M ++ LD +Y+ +I K
Sbjct: 367 EMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
L+ A + M +GF PG ++ LVD + D K+ E G +Y
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Query: 366 SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
LI K +++ A L++ M+ G + ++T + ++ ++GK+ A + F M
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
Query: 426 GFLPTPSTYACLLEMHAASGQI 447
+ Y + +A +
Sbjct: 547 RLMVNLKLYKSISASYAGDNDV 568
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 176/398 (44%), Gaps = 11/398 (2%)
Query: 139 TQLDKLQFVPNMTHVTQALKVV-NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR 197
+Q ++ Q + V +AL ND L F W +R+S + + + + + D L +
Sbjct: 36 SQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYF 95
Query: 198 DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
+F+ L + M+G++ V V V + A ++ + + K+ D + +T
Sbjct: 96 EFEISWALINRMIGNT--ESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETS 153
Query: 258 TYNSLITLFLNKGLPYKAFEI---YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
YN + L +K + +A E+ + + ++ + L++ +K G + +
Sbjct: 154 FYNLVDALCEHKHV-VEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYW 212
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
++M G L ++ +D M K+G+ A+K++ EM+ + Y ++I + S
Sbjct: 213 KKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGAS 272
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
+E +R++ EM+ G PN A + +I+ + G++ A +M K G P TY
Sbjct: 273 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 332
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
CL +I + L+ M +G+RP + TY +L+ + + MK
Sbjct: 333 MCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 495 MGYSVDVTASD-VLMVYIKEGSVDLALRWLRFMGSSGI 531
G + D A + V+ I++G +D+A + M G+
Sbjct: 390 SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+KK+ G D +Y+ + + G P+KA ++Y+ M+ LD Y +I +
Sbjct: 212 WKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGA 271
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM--RGF------ 355
S ++ ++F+EM+ RG P + +++ + + GR+ A ++ EM RG
Sbjct: 272 SQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSIT 331
Query: 356 ------------------------GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
G RP YV L+ + + G L+ L +W MK +G
Sbjct: 332 YMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP 429
P+ A Y VI++ + G LD+A +M + G P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+VA N VI+ + ++ +E F+++++ GC+ + T+N++I L G A+ + +
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M K C DS TY + L K + LF M G RP ++ + L+ + G
Sbjct: 319 EMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
L + V M+ G P Y ++I++ ++ G L+ A +EM G P
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 140/343 (40%), Gaps = 15/343 (4%)
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM-----EKTSCLLDSSTYELMIPNLA 302
+++G + TET+N +I + L K Y FEI ++ T + + T+ ++
Sbjct: 73 RESGFRHTTETFNRVIDI-LGK---YFEFEISWALINRMIGNTESVPNHVTFRIVFKRYV 128
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM--EMRGFGYRPP 360
+ + A + ++ R + F +LVD++ + + A ++ + G G+
Sbjct: 129 TAHLVQEAIDAYDKLDDFNLRDETS-FYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVS 187
Query: 361 PT-IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
T I+ ++ + K G W +M G + Y++ ++ KSGK A+ +
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
+M+ Y ++ AS ++ ++++ M G P ++T+ ++ LL
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
+ A ++L EM G D L +++ S L+L M SG+R
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSL--FGRMIRSGVRPKMDTYV 365
Query: 540 QLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L + G + + +T S D Y +++ L++
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 408
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 4/336 (1%)
Query: 174 KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAK 233
K + +P+ Y L DG R+ + + + M D V V N ++ + +
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV---VTVNTIVGGMCR 453
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
L ++ F ++ G K + TY +LI + KA YE M + C D+
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
Y +I L + R A ++ +++K GF L + L+ + ++ +M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G +P Y +LI + K E+ R+ ++M+ G P Y VI+++ G+LD
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 414 IAMSAFSDME-KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
A+ F DM + P Y L+ + G A+ L M +RP + TY L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
L K + K++ EM + ++LM
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I +E + ++K+ +AGC D + Y +LI+ + A + E +++
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
LD Y ++I + +++ +M+ G +P + +L+ GK +S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKI-AGYRPNFALYTLVIES 405
++ +MR G P T Y ++I++Y G+L+ AL+L+ +M + + PN +Y ++I +
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+K G A+S +M+ P TY L + Q + +KL + M P
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 466 LSTYTVLLTLLA 477
T +L+ L+
Sbjct: 722 QITMEILMERLS 733
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K+++ G +D YN LI LF +K K +E+ MEK DS TY +I K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR--PPPT 362
++ ++ ++M+ G P + + +++D+ G LD A+K+ +M G + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHSKVNPNTV 653
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
IY LI ++ K G AL L +EMK+ RPN Y + + + + + + +M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 423 EKAGFLPTPSTYACLLEMHAASGQI 447
+ P T L+E + S ++
Sbjct: 714 VEQSCEPNQITMEILMERLSGSDEL 738
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 133/328 (40%), Gaps = 43/328 (13%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A++I + K L++ + ++ L ++ + L +M RP + L++
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 335 SMGKAGRLDSAMKVHMEMRG---------------FGY---------------------- 357
++ K+ R+D A++V +MRG F
Sbjct: 338 TLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 358 -----RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
P Y LI+ Y ++GKLETA + MK +PN ++ + L
Sbjct: 398 LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
++A+ F DMEK G TY L+ + ++ AM Y M AG P Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
++ L + A +++ ++K G+S+D+ A ++L+ ++ + + + L M G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ L K +ES + ++E
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMME 605
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 144/388 (37%), Gaps = 48/388 (12%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM------EKTSCLLDSSTYELMIP 299
K+ + + D T LI +A E++E M + DS + +I
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLID 378
Query: 300 NLAKSGRLDAAFKLFQEMK-GRGFRPGLNIFASLVDSMGKAGRLDSAMKV---------- 348
L K GRL A +L MK P + L+D +AG+L++A +V
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 349 -------------------------HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
M+M G + Y++LI + +E A+
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
+++M AG P+ +Y +I + + A+ +++ GF Y L+ +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
+ ++ M G +P TY L++ K + +++ +M+ G VT
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 504 -SDVLMVYIKEGSVDLALRWLRFMG-SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETY 561
V+ Y G +D AL+ + MG S + N I L + K G + A L E
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 562 VNSAAKVDLILYTSILAHLVRCQEEKNE 589
+ ++ Y + L +C EK +
Sbjct: 679 KMKMVRPNVETYNA----LFKCLNEKTQ 702
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR- 320
++ L+ G+ A ++++ M + +C ++ ++ S +LD A K F+E+ +
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETA 380
G P L + +++ ++ + G +D + + E+ G+ P + +L+E + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
R+WD MK PN Y + ++ K A++ M+ G P TY L+
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+ ++ MK YN M GL P TY +L+ LL K +D A ++ E
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 5/257 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPNLA 302
F ++ + C+ +++N+L++ ++N +A + ++ + EK D TY MI L
Sbjct: 145 FDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALC 204
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
+ G +D +F+E++ GF P L F +L++ + ++ M+ P
Sbjct: 205 RKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
Y S + ++ K AL L D MK G P+ Y +I ++ L+ M +++M
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL--RPGLSTYTVLLTLLANKK 480
++ G P TY L+ + G +D A+++ L RP + Y ++ L
Sbjct: 325 KEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAG 382
Query: 481 LVDVAAKILLEMKAMGY 497
+D A +++ K Y
Sbjct: 383 KIDEATQLVKNGKLQSY 399
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
LV N +I+ L + ++ F++++ G + D ++N+L+ F + L + I++
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M+ + + +Y + L ++ + A L MK G P ++ + +L+ +
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM---KIAGYRPNFA 397
L+ MK + EM+ G P Y LI K G L+ A+ + +E K+ RPN
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS-RPN-- 369
Query: 398 LYTLVIESHAKSGKLDIA 415
+Y V+E +GK+D A
Sbjct: 370 MYKPVVERLMGAGKIDEA 387
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 302 AKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+K+ +L + F+ + FR ++++ + + +A + + +V + F
Sbjct: 62 SKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKS 121
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ ++ Y SG E A +L+DEM + ++ ++ S KLD AM F
Sbjct: 122 EDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFK 181
Query: 421 DM-EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
++ EK G P TY +++ G +D + ++ + G P L ++ LL +
Sbjct: 182 ELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR 241
Query: 480 KLVDVAAKILLEMKAMGYSVDV 501
+L +I MK+ S ++
Sbjct: 242 ELFVEGDRIWDLMKSKNLSPNI 263
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 4/329 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+ Y L DG R+ + + + M D V V N ++ + + L ++
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV---VTVNTIVGGMCRHHGLNMA 460
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
F ++ G K + TY +LI + KA YE M + C D+ Y +I
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L + R A ++ +++K GF L + L+ + ++ +M G +P
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y +LI + K E+ R+ ++M+ G P Y VI+++ G+LD A+ F
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 421 DME-KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
DM + P Y L+ + G A+ L M +RP + TY L L K
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ K++ EM + ++LM
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 1/252 (0%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I +E + ++K+ +AGC D + Y +LI+ + A + E +++
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
LD Y ++I + +++ +M+ G +P + +L+ GK +S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKI-AGYRPNFALYTLVIES 405
++ +MR G P T Y ++I++Y G+L+ AL+L+ +M + + PN +Y ++I +
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
+K G A+S +M+ P TY L + Q + +KL + M P
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 466 LSTYTVLLTLLA 477
T +L+ L+
Sbjct: 722 QITMEILMERLS 733
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K+++ G +D YN LI LF +K K +E+ MEK DS TY +I K
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR--PPPT 362
++ ++ ++M+ G P + + +++D+ G LD A+K+ +M G + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHSKVNPNTV 653
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
IY LI ++ K G AL L +EMK+ RPN Y + + + + + + +M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 423 EKAGFLPTPSTYACLLEMHAASGQI 447
+ P T L+E + S ++
Sbjct: 714 VEQSCEPNQITMEILMERLSGSDEL 738
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 161/372 (43%), Gaps = 13/372 (3%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQ----DAG--CKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+I L K+ +++ + F++++ D G K D+ +N+LI G +A E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 281 SME-KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
M+ + C+ ++ TY +I ++G+L+ A ++ MK +P + ++V M +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
L+ A+ M+M G + Y++LI + +E A+ +++M AG P+ +Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+I + + A+ +++ GF Y L+ + + ++ M
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDL 518
G +P TY L++ K + +++ +M+ G VT V+ Y G +D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 519 ALRWLRFMG-SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
AL+ + MG S + N I L + K G + A L E + ++ Y +
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA-- 692
Query: 578 AHLVRCQEEKNE 589
L +C EK +
Sbjct: 693 --LFKCLNEKTQ 702
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 133/328 (40%), Gaps = 43/328 (13%)
Query: 275 AFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVD 334
A++I + K L++ + ++ L ++ + L +M RP + L++
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 335 SMGKAGRLDSAMKVHMEMRG---------------------------------------- 354
++ K+ R+D A++V +MRG
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 355 FGYR--PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
R P Y LI+ Y ++GKLETA + MK +PN ++ + L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 413 DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
++A+ F DMEK G TY L+ + ++ AM Y M AG P Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 473 LTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGI 531
++ L + A +++ ++K G+S+D+ A ++L+ ++ + + + L M G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 532 RTNNFIIRQLFESCMKSGLYESAKPLLE 559
+ ++ L K +ES + ++E
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMME 605
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 145/369 (39%), Gaps = 60/369 (16%)
Query: 181 PSDDC--YVMLFDGLNRSRDFDGVQLLFDEM--VGDSANSGVSLLVACNRVIQYLAKA-- 234
PS +C Y L GL + D LF+ M G N V CN ++ L +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNR-----VTCNIIVHALCQKGV 241
Query: 235 -----EKLEVSFCCFKKIQD---AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+KL ++I D A +D L+ G +A E+++ M + +
Sbjct: 242 IGNNNKKL------LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
DS Y ++I L SG + AA+ +M RG P + + +L+ ++ K G+ D A
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355
Query: 347 KVHMEMRGFGYRPPPTIYVSLIES-----------------------------------Y 371
+H M+ G P Y +I+ Y
Sbjct: 356 DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
+ G +AL + + M G +PN +I + K G+L A ++M P
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+TY LL G + A +LY+ M G +P + TYT L+ L K + A +L
Sbjct: 476 TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535
Query: 492 MKAMGYSVD 500
++A G ++D
Sbjct: 536 IQATGITID 544
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 135/328 (41%), Gaps = 5/328 (1%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+++ L KL+ + KK+ +G T+N L+ G KA + M +
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+ +Y +I L +D A LF M G RP +V ++ + G + +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 347 KVHME--MRGFGYRPPPTIYVS--LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
K +E + P I + L++S K+G + AL +W EM + +Y ++
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I SG + A DM K G P TY L+ G+ D A L+ +M N G+
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALR 521
P +Y V++ L V+ A + LL M +V +V++ Y + G AL
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSG 549
L M S G++ N + L +K G
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 7/252 (2%)
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
RL S + + + F Y +I+ S++ GKL+ AL L +M +G P +
Sbjct: 101 RLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHN 160
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
++ K+G ++ A +M + G P +Y L++ + +D A+ L+N+M
Sbjct: 161 HLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY 220
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLE----MKAMGYSVDVTASDVLM-VYIKEGS 515
G+RP T +++ L K ++ K LLE +D+ +LM K G+
Sbjct: 221 GIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGN 280
Query: 516 VDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTS 575
V AL + M + ++ + + SG +A + V D+ Y +
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 576 ILAHLVRCQEEK 587
+++ L C+E K
Sbjct: 341 LISAL--CKEGK 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 8/257 (3%)
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
+S + CL S + ++ +L G+LDAA L ++M G PGL L++ + KA
Sbjct: 113 KSFDYDDCL---SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKA 169
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G ++ A + EMR G P Y +LI+ ++ AL L++ M G RPN
Sbjct: 170 GYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTC 229
Query: 400 TLVIESHAKSGKL----DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
+++ + + G + + D +A L++ +G + A++++
Sbjct: 230 NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWK 289
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEG 514
M+ + Y V++ L + + A + +M G + DV T + ++ KEG
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 515 SVDLALRWLRFMGSSGI 531
D A M + G+
Sbjct: 350 KFDEACDLHGTMQNGGV 366
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G K + T N+LI ++ G A+ + M T D++TY L++ G L A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
F+L+ EM RG +P + + LV + GRL A + ++ G ++ L +
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKK 554
Query: 371 YVK 373
Y +
Sbjct: 555 YTR 557
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 172/422 (40%), Gaps = 54/422 (12%)
Query: 202 VQLLFDEMVGDSAN-SGVSLLVACNRVI---QYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
V+ L E+ AN + V L V + Y+A ++E K+ + GC
Sbjct: 461 VESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIE-------KMVNLGCTPLPF 513
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
+YNS+I + + + +++ + D TY +++ L K DAAF + M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ G RP + I++S++ S+GK GR+ A + +M G +P Y+ +I +Y ++G++
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A L +E+ RP+ YT++I K G ++ M + G P Y L
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT----------------------- 474
+ G + L+ M ++ Y LL+
Sbjct: 694 IGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKL 753
Query: 475 ---LLANKKLVDVAAKILLEMKAMGYSVDVTA-------------SDVLMVYIKEGSVDL 518
L+ K LV + + L + ++++V + ++ Y G +D
Sbjct: 754 LQRLIRTKPLVSIPSS-LGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDE 812
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
A L M GI N L +S +++G ESA L E + + D ++Y+++L
Sbjct: 813 AYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLK 869
Query: 579 HL 580
L
Sbjct: 870 GL 871
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 150/375 (40%), Gaps = 12/375 (3%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFD-GVQLLFDEMVGDSANSGVSLLV 222
D L LF S + CY L G + D V LL + ++ V
Sbjct: 359 DYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
+++ L K +L+ + + I D GC I+ + L + K + +
Sbjct: 419 ----LLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL------GNIEVKVESLLGEI 468
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ L + ++ L AA ++M G P + S++ + + +
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENII 528
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
+ + ++ + P Y+ ++ K + A + D M+ G RP A+Y+ +
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I S K G++ A F+ M ++G P Y ++ +A +G+ID A +L + L
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALR 521
RP TYTVL++ +++ + L +M G S +V L+ ++K+G +
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFT 708
Query: 522 WLRFMGSSGIRTNNF 536
MG + I+ ++
Sbjct: 709 LFGLMGENDIKHDHI 723
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 116/294 (39%), Gaps = 36/294 (12%)
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
L++ L R AF F+++K RG L L + G L+ A+ + + G
Sbjct: 171 LVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGM 230
Query: 356 GYRP-PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
P P +Y SL + K G A L+D M++ GY + +YT +++ + K + +
Sbjct: 231 TRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTM 290
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
AM + M + F P + L+ G +D +++ M G++ + TY +++
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 475 LLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALR-WLRFMGSSGIRT 533
Y KEG+VD ALR ++ GS I
Sbjct: 351 ----------------------------------SYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
N L K G + A LL +++ D I Y +L L +C E K
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 151/376 (40%), Gaps = 30/376 (7%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
+ Y +LI F KG KA ++ M + D TY +++ L K L A +
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL 436
Query: 315 QEM--KGRGFRPGL-----NIFASLVDSMGKAGRLDS----------------------A 345
Q + G G P + NI + +G+ R D+ A
Sbjct: 437 QSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAA 496
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ +M G P P Y S+I+ + +E L + ++ + P+ Y +V+
Sbjct: 497 LSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNE 556
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
K D A + ME+ G PT + Y+ ++ G++ A + + M +G++P
Sbjct: 557 LCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPD 616
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEM-KAMGYSVDVTASDVLMVYIKEGSVDLALRWLR 524
Y +++ A +D A +++ E+ K T + ++ ++K G ++ ++L
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 525 FMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQ 584
M G+ N + L +K G ++ + L + K D I Y ++L+ L R
Sbjct: 677 KMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAM 736
Query: 585 EEKNERHLMSILGATK 600
K +R ++ G K
Sbjct: 737 ARKKKRQVIVEPGKEK 752
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
Y SL F +G +A +++ ME +D Y ++ K + A +L+ M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
R F IF +L+ K G LD + +M G + Y +I SY K G ++
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 379 TALRLW-DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
ALRL+ + N YT +I K G +D A+ M G +P TY L
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 438 LEMHAASGQIDHAMKLYNSMTNAG 461
L+M ++ +AM + S+ + G
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNG 443
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 142/355 (40%), Gaps = 43/355 (12%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ P D Y+++ + L + D D + D M V++ + +I L K ++
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIY---SSIIGSLGKQGRVV 599
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ F K+ ++G + D Y +I + G +A E+ E + K S TY ++I
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
K G ++ + +M G P + ++ +L+ K G + + M +
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 359 PPPTIYVSLI-------------ESYVKSGKLETALRLWDE------------------- 386
Y++L+ + V+ GK + RL
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 387 MKIAG-----YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMH 441
M++ G PN L+ +I + +G+LD A + M+K G +P TY L++ H
Sbjct: 780 MEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSH 839
Query: 442 AASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
+G I+ A+ L+ TN P Y+ LL L + K A ++LEM+ G
Sbjct: 840 IEAGDIESAIDLFEG-TNC--EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 141/361 (39%), Gaps = 31/361 (8%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
++D +N+LI F+ G+ K ++ M K + TY +MI + K G +D A +
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALR 363
Query: 313 LFQEMKG-RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
LF G ++ + +L+ K G +D A+ + M M G P Y L++
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 372 VKSGKLETALRLWDEM---------------------------KIAGYRPNFALYTLVIE 404
K +L+ A+ + + +IA N A L +
Sbjct: 424 PKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVV 483
Query: 405 SHAKSGKLD--IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ A + + A+S M G P P +Y +++ I+ L N +
Sbjct: 484 TTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDF 543
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALR 521
P + TY +++ L K D A I+ M+ +G V S ++ K+G V A
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLV 581
M SGI+ + + + ++G + A L+E V + YT +++ V
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 582 R 582
+
Sbjct: 664 K 664
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ +I +GRLD A+ + M+ G P L + L+ S +AG ++SA+ +
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FE 853
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G P +Y +L++ + AL L EM+ +G PN Y +++ S
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG------LRPGL 466
A+ DM P + L+ + ++ A L+ M +G +PGL
Sbjct: 914 EAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGL 972
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 193 LNRSRDFDGVQLLFDEMVGDSANSGV-SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG 251
LN D D V L D S+ V LLV C I+YL E+ F FK++ D G
Sbjct: 141 LNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYL------ELGFDVFKRLCDCG 194
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
+ T N+LI + + IYE + T +MI L K GRL
Sbjct: 195 FTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVV 254
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
L + G+ P + + SLV + + R++ +M + + Y ++ +
Sbjct: 255 DLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAK 314
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K G L +A +++DEM G+ N +YT+ + + G + A S+ME++G P
Sbjct: 315 AKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
T+ CL+ A G + ++ M GL P S + ++ ++ + V+ A +IL +
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTK 434
Query: 492 MKAMGYSVDV-TASDVLMVYIKEGSVDLALR 521
G+ D T S ++ +I+ +D AL+
Sbjct: 435 SIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
Query: 262 LITLFLNKGLPYKAFE---IYESMEKTSCLL------DSSTYELMIPNLAKSGRLDAAFK 312
L ++ +N L ++ E I ESM LL D+ Y +++ AK G L +A K
Sbjct: 266 LPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARK 325
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
+F EM RGF ++ V + G + A ++ EM G P + LI +
Sbjct: 326 VFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFA 385
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
+ G E L + M G P+ + + +++S +K ++ A + GF+P
Sbjct: 386 RFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEH 445
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY+ L+ ID A+KL+ M + PG + L+ L V+ K L M
Sbjct: 446 TYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIM 505
Query: 493 K 493
K
Sbjct: 506 K 506
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 203 QLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSL 262
+LL MV D+ G S++V L A K+ F ++ G ++ Y
Sbjct: 294 RLLMKNMVVDTI--GYSIVVYAKAKEGDLVSARKV------FDEMLQRGFSANSFVYTVF 345
Query: 263 ITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF 322
+ + KG +A + ME++ T+ +I A+ G + + + M RG
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405
Query: 323 RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR 382
P + F +V S+ K ++ A ++ + G+ P Y LI +++ ++ AL+
Sbjct: 406 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
L+ EM+ P F ++ +I GK++ M+K P Y L++
Sbjct: 466 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 525
Query: 443 ASGQIDHAMKLYNSMTNA 460
G +A ++YN M +
Sbjct: 526 KIGDKTNADRVYNEMISV 543
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 118/243 (48%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ + G + TY SLI + KGL +A ++E +++ + D Y +++ ++G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
+ A ++ M G R I SL++ K+G+L A ++ M + +P Y +
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
L++ Y ++G ++ AL+L D+M P Y ++++ +++ G +S + M K G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
+ + LLE G + AMKL+ ++ GL T V+++ L + V+ A
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 487 KIL 489
+IL
Sbjct: 527 EIL 529
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 44/405 (10%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNR 226
LSL++ ++ + C +L + L + DF+ L++ ++ A ++ + N
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLL-EALFKLGDFNEAMKLWENVL---ARGLLTDTITLNV 511
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I L K EK+ + + CK +TY +L + G +AF + E ME+
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
Y +I K L+ L E++ RG P + + +L+ G +D A
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD-----EMKIAGYR-------- 393
EM G I + S + K++ A L ++ + GY+
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 394 -------------------------PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG-F 427
PN +Y + I K+GKL+ A FSD+ + F
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
+P TY L+ A +G I+ A L + M G+ P + TY L+ L VD A +
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 488 ILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
+L ++ G + + +T + ++ +K G+V A+R M G+
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 184/440 (41%), Gaps = 19/440 (4%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
+A L +F A +Q + P Y + L+R+R++ + E+V + +SG +
Sbjct: 85 EACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN-HSGFVVWGE 143
Query: 224 CNRVIQYLA------------KAEK--LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNK 269
RV + + AEK ++ + F + + G + NSL++ + K
Sbjct: 144 LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203
Query: 270 GLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR-GFRPGLNI 328
G + A +Y+ M D T +++ +SG +D A +E + G +
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
+ SL++ G ++ +V M G Y SLI+ Y K G +E A +++ +K
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+ +Y ++++ + ++G++ A+ +M + G + L+ + SGQ+
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
A ++++ M + L+P TY L+ VD A K+ +M V ++L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 509 V-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAK 567
Y + G+ L + M G+ + L E+ K G + A L E +
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 568 VDLILYTSILAHLVRCQEEK 587
D I +++ L C+ EK
Sbjct: 504 TDTITLNVMISGL--CKMEK 521
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 11/334 (3%)
Query: 241 FCCFKKIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
+C +I+DA G + +T NSLI + G +A +I+ M S D
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
TY ++ ++G +D A KL +M + P + + L+ + G + +
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
M G +L+E+ K G A++LW+ + G + ++I K
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
K++ A ++ P TY L + G + A + M G+ P + Y
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSS 529
L++ + ++ A +++E++A G + V L+ + G +D A M
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVN 563
GI N I ++ S + + A LL+ V+
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG-YRPPPTIYVSLIESYVKSGKLETALR 382
P ++ + + KAG+L+ A K+ ++ + P Y LI +G + A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
L DEM + G PN Y +I+ K G +D A + + G P TY L++
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 443 ASGQIDHAMKLYNSMTNAGLRPG 465
SG + AM+L M GL G
Sbjct: 837 KSGNVAEAMRLKEKMIEKGLVRG 859
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY ++I A +G ++ AF L EM +G P + + +L+ + K G +D A ++
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
++ G P Y +LI+ VKSG + A+RL ++M G ++ K
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGSDKQ 863
Query: 410 GKLDIAMSAFSDME 423
G +DI D E
Sbjct: 864 GDVDIPKEVVLDPE 877
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 217 GVSLLV-ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLP--Y 273
G++L V C+++ L + +K++ + +KI D + Y SL FL
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL--PGYQSLKE-FLEASATTCL 697
Query: 274 KAFEIYESMEKTS----CLLDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNI 328
K +I ES+E ++ + ++ Y + I L K+G+L+ A KLF ++ F P
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
+ L+ AG ++ A + EM G P Y +LI+ K G ++ A RL ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
G PN Y +I+ KSG + AM M + G +
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 194/470 (41%), Gaps = 58/470 (12%)
Query: 65 YCN--NGSGSKEFTEEIEYLDESGSVIYKGKGVRSVEPGLDDHVMVGDVKKPFMNALAVA 122
YC+ NGSG EF++E E +D+ + ++ P L V K M+ +
Sbjct: 570 YCDELNGSGKAEFSQEEELVDDYNCPQLVQQS--ALPPAL------SAVDK--MDVQEIC 619
Query: 123 KIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVN-DGDAGLSLFRWAKRQSWYSP 181
+++ + W+ E + +QF P + V + L+ G+A L F W +++ Y
Sbjct: 620 RVLSSSRDWERTQEA-LEKSTVQFTPEL--VVEVLRHAKIQGNAVLRFFSWVGKRNGYKH 676
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
+ + Y M +DF ++ LF EM ++ ++QY + ++
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMRSLFYEM--RRQGCLITQDTWAIMIMQY-GRTGLTNIAI 733
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKG-------------------LPYKAF------ 276
FK+++D G + T+ LIT+ K +P +
Sbjct: 734 RTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLG 793
Query: 277 ---EIYESMEKTSCLLDS---------STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
E+ + + SC LDS Y + I L + G+L+ A +G
Sbjct: 794 CLCEVGNTKDAKSC-LDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL 852
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
+ S+V + + G L A+ M+ G +P +Y SLI + K +LE L
Sbjct: 853 DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC 912
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
+M+ P+ YT +I + GK++ A +AF +ME+ G P TY+ + +
Sbjct: 913 QKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA 972
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+ + A+KL + M + G+ P + + L + D+ A+I L+ K+
Sbjct: 973 CKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDL-ARIALQKKS 1021
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 178/394 (45%), Gaps = 15/394 (3%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ +A L++ +++ GC D T+ LI+++ K ++E M K
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRK 252
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ LD++ Y +MI +L +GR D A + ++EM +G GL + L+D + K+ ++D
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDV 312
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
+ +M + L++S+ SGK++ AL L E+K + + ++++
Sbjct: 313 VQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVK 372
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
++ ++ A+ D+ K L + Y ++ + + A++ + + +G P
Sbjct: 373 GLCRANRMVDALE-IVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWL 523
+STYT ++ L K + + EM G D V + V+ ++ + V A +
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 524 RFMGSSGI----RTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
M GI ++ + +++L C S E K + + A+K+ ++ I +
Sbjct: 492 SSMEEKGIKPTWKSYSIFVKEL---CRSSRYDEIIKIFNQMH---ASKI--VIRDDIFSW 543
Query: 580 LVRCQEEKNERHLMSILGATKHKAHSFMCGLFTG 613
++ E+ E+ + ++ + +++S+ C G
Sbjct: 544 VISSMEKNGEKEKIHLIKEIQKRSNSY-CDELNG 576
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 14/305 (4%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFE-IYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
G K ++E YN I + G +K ++ M + CL+ T+ +MI ++G +
Sbjct: 673 GYKHNSEAYNMSIKV-AGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNI 731
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSM-GKAGR-LDSAMKVHMEMRGFGYRPPPTIYVSL 367
A + F+EMK G P + F L+ + K GR ++ A + EM G+ P +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
+ + G + A D + G+ P Y++ I + + GKL+ A+S + E
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
L TY ++ G + A+ NSM G +PG+ YT L+ +K ++ +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 488 ILLEMKAMGYSVD---VTASDVLMVYIKEGSVDLALRWLRFMGSSG----IRTNNFIIRQ 540
+M+ G S + VT + ++ Y+ G V+ A R M G +T + I
Sbjct: 911 TCQKME--GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 541 LFESC 545
L ++C
Sbjct: 969 LCQAC 973
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 11/293 (3%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
Y M+ ++ LD +L EM+ G + + L+ GKA ++ + V +MR
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G+ T Y +I S +G+ + AL + EM G Y ++++ AKS K+D
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
+ S DM + + + LL+ SG+I A++L + N + + +L+
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 474 T-LLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSG-- 530
L ++VD A +I+ MK ++ Y+++ V AL + SG
Sbjct: 372 KGLCRANRMVD-ALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 531 --IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA-HL 580
+ T I++ LF K +E L + + + D + T+++A HL
Sbjct: 431 PRVSTYTEIMQHLF----KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 349 HMEMRGF-------GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
H+ MR F G+ IY +++ ++ L+ L EM+ G + +T+
Sbjct: 170 HLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTI 229
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+I + K+ K+ + F M K+GF + Y ++ +G+ D A++ Y M G
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG 289
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+ GL TY +LL +A + VDV I +M
Sbjct: 290 ITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 310 AFKLFQEMKGR-GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A + F +K + GF + I+ +++ G+A LD ++ EM G + LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
Y K+ K+ L ++++M+ +G+ + Y ++I S +G+ D+A+ + +M + G
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
TY LL+ A S ++D + + M + LL + A ++
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 489 LLEMKAMGYSVDVTASDVLM 508
+ E+K +D ++L+
Sbjct: 352 IRELKNKEMCLDAKYFEILV 371
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
K GY+ N Y + I+ S F +M + G L T T+A ++ + +G
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK--LVDVAAKILLEMKAMGYSVDVT-AS 504
+ A++ + M + GL P ST+ L+T+L KK V+ A + EM G+ D
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 505 DVLMVYIKEGSVDLALRWLRFMGSSGIRTN---NFIIRQLFESCMKSGLYESAKPLLETY 561
D L + G+ A L +G G + IR L + G E A L ++
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRAL----CRIGKLEEALSELASF 845
Query: 562 VNSAAKVDLILYTSILAHLVR 582
+ +D Y SI+ L++
Sbjct: 846 EGERSLLDQYTYGSIVHGLLQ 866
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
S DCY+ L + D + L E+ S +S L+ NR+I A+ +++
Sbjct: 141 SSDCYLNLARAFINTDDCTYLTSLLKEI---SESSLPYRLIVMNRIIFAFAETRQIDKVL 197
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPN 300
K++++ CK D TYNS++ + GL + + +M E S ++ TY ++
Sbjct: 198 MILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNG 257
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
+ K+ R D ++ EM G P L + +++DS+G++G + ++++ EM+ RP
Sbjct: 258 MRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPS 317
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMK 388
+Y +LI+ KSG ++AL+L DE+K
Sbjct: 318 VYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
K+I ++ N +I F K I + M++ C D TY ++ L +
Sbjct: 165 LKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGR 224
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNI--FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
+G ++ + MK +NI + ++++ M KA R D + ++ EM G P
Sbjct: 225 AGLVNEILGVLSTMK-EDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y ++I+S +SG ++ +LRL+DEMK RP+ +Y +I+ KSG A+ +
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDE 343
Query: 422 MEKAGFL 428
++ L
Sbjct: 344 LKNTSSL 350
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 294 YELMIPN-----LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
Y L++ N A++ ++D + +EMK +P + + S++D +G+AG ++ + V
Sbjct: 175 YRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGV 234
Query: 349 HMEMRGFGYRPPPTI-YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
M+ I Y +++ K+ + + L +++EM G P+ YT VI+S
Sbjct: 235 LSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLG 294
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+SG + ++ F +M++ P+ Y L++ SG A++L + + N
Sbjct: 295 RSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTS 348
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 130/294 (44%), Gaps = 4/294 (1%)
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
+I E S ++ Y ++ + G L A+ L Q ++ + +++F +L+ +
Sbjct: 56 KIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAA 115
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPT--IYVSLIESYVKSGKLETALRLWDEMKIAGYRP 394
G+ + + +V E+ + P + Y++L +++ + L E+ +
Sbjct: 116 GELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPY 175
Query: 395 NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ +I + A++ ++D + +M++ P TY +L++ +G ++ + +
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 455 NSMT-NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIK 512
++M + + + TY +L + D+ I EM G D+ + + V+ +
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 513 EGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAA 566
G+V +LR M IR + ++ R L + KSG ++SA L + N+++
Sbjct: 296 SGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSS 349
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 191/437 (43%), Gaps = 45/437 (10%)
Query: 96 RSVEPG-LDDHVMV------GDVKKPFMNALAVAKIVEVVKRWKWGPEL-----DTQLDK 143
R VE G +D+ + V +V PF N + A I K K PEL ++ +D
Sbjct: 143 RFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGK--PELALGFFESAVDS 200
Query: 144 LQFVPNM---THVTQALKVVNDGDAGLSLFRWAKRQSW------YSPSDDCYV---MLFD 191
VPN+ T + AL + D L R + + + YS Y L D
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 192 GLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG 251
L + R EMV N V V+ + +I L+K +E + K+ G
Sbjct: 261 ALMQDR----------EMVEKGMNRDV---VSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
+ + TY ++I G +AF ++ + +D Y +I + + G L+ AF
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
+ +M+ RG +P + + ++++ + AGR+ A +V + G Y +L++SY
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG-----DVITYSTLLDSY 422
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
+K ++ L + A + + +++++ G A + + M + P
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+TYA +++ + +GQI+ A++++N + + + + Y ++ L K ++D A ++L+E
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIE 541
Query: 492 MKAMGYSVDVTASDVLM 508
+ G +D+ S L+
Sbjct: 542 LWEKGLYLDIHTSRTLL 558
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 230 YLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL 289
+L KA ++ C F K + G ++T TYNSLI +G +A +++S+E +
Sbjct: 670 FLVKA----LNLCSFAKSR--GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
TY ++I NL K G A KL M +G P + I+ S+VD K G+ + AM+V
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV- 782
Query: 350 MEMRGFGYRPPPTIYV-SLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+ + G P V S+I+ Y K G +E AL ++ E K +F + +I+
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 409 SGKLDIAMSAFSDM 422
G+++ A +M
Sbjct: 843 KGRMEEARGLLREM 856
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 127/305 (41%), Gaps = 7/305 (2%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELMIPNLAKSGRLDAAFKL 313
D +++I+ F G P A +ES + L+ + TY ++ L + G++D L
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
+ ++ GF +++ + K G L A+ EM G Y LI+ K
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
G +E AL L +M G PN YT +I K GKL+ A F+ + G
Sbjct: 290 EGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL 349
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
Y L++ G ++ A + M G++P + TY ++ L V A ++
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV----- 404
Query: 494 AMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
+ G DV T S +L YIK ++D L R + I + + L ++ + G Y
Sbjct: 405 SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 553 SAKPL 557
A L
Sbjct: 465 EADAL 469
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 198/497 (39%), Gaps = 114/497 (22%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y +L DGL++ + + L +M+ + L+ +I+ L K KLE +F F
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPN---LITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
+I G ++D Y +LI KG +AF + ME+ TY +I L +G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH---------------- 349
R+ A ++ +G + +++L+DS K +D+ +++
Sbjct: 397 RVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 350 ------MEMRGFG-----YR--------PPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+ M +G YR P Y ++I+ Y K+G++E AL +++E++ +
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTPSTYACLLEMHAASGQ--- 446
Y +I++ K G LD A ++ EK +L ++ L +HA G
Sbjct: 512 SVSAAVC-YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 570
Query: 447 --IDHAMKLYNSMTNAGL-------------------------RPGLSTY---TVLLTLL 476
+ + ++ NS G+ R GL+ T+L TL+
Sbjct: 571 LGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLV 630
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTN- 534
N + +D ++ + S+DV +++ + KEG + AL F S G+ N
Sbjct: 631 DNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNT 690
Query: 535 -------NFIIRQ---------------------------LFESCMKSGLYESAKPLLET 560
N + +Q L ++ K GL+ A+ LL++
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750
Query: 561 YVNSAAKVDLILYTSIL 577
V+ ++I+Y SI+
Sbjct: 751 MVSKGLVPNIIIYNSIV 767
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 146/374 (39%), Gaps = 42/374 (11%)
Query: 213 SANSGVSL--LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
+ +SGV + LV ++ L + K++ ++++D G + D Y++ I + G
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG 256
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
A M + D +Y ++I L+K G ++ A L +M G P L +
Sbjct: 257 ALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
+++ + K G+L+ A + + G +YV+LI+ + G L A + +M+
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G +P+ Y VI +G++ A D G + TY+ LL+ + ID
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAV 431
Query: 451 MK-----------------------------------LYNSMTNAGLRPGLSTYTVLLTL 475
++ LY +M L P +TY ++
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
++ A ++ E++ S V + ++ K+G +D A L + G+ +
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 536 FIIRQLFESCMKSG 549
R L S +G
Sbjct: 552 HTSRTLLHSIHANG 565
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%)
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
E T +D Y ++I L K G L A L K RG + SL++ + + G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A+++ + G P Y LI++ K G A +L D M G PN +Y +
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
++ + K G+ + AM S P T + +++ + G ++ A+ ++ + +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+ L+ K ++ A +L EM
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
+D Y +I +G KA + + L++ TY +I L + G L A +L
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
F ++ G P + L+D++ K G A K+ M G P IY S+++ Y K
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
G+ E A+R+ + P+ + +I+ + K G ++ A+S F++ +
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 434 YACLLEMHAASGQIDHAMKLYNSM 457
+ L++ G+++ A L M
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREM 856
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 9/257 (3%)
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTLVIESHAKS 409
+R G P + SLI +V+ G+++ A+ + + M K Y + + + VI K
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 410 GKLDIAMSAFSDMEKAGFL-PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
GK ++A+ F +G L P TY L+ G++D L + + G
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 469 YTVLL-TLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFM 526
Y+ + LVD + EM G + DV + +L+ + KEG+V+ AL L M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDR-EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 527 GSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEE 586
G+ N + K G E A L ++ +VD LY +++ + R +
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR---K 360
Query: 587 KNERHLMSILGATKHKA 603
N S+LG + +
Sbjct: 361 GNLNRAFSMLGDMEQRG 377
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 134/358 (37%), Gaps = 44/358 (12%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
+P Y + G ++ + +F+E+ S VS V NR+I L K L+
Sbjct: 479 TPDTATYATMIKGYCKTGQIEEALEMFNEL----RKSSVSAAVCYNRIIDALCKKGMLDT 534
Query: 240 SFCCFKKIQDAGCKIDTETYNSLI-TLFLNKGLPYKAFEIY--ESMEKTSCLLDSSTYEL 296
+ ++ + G +D T +L+ ++ N G +Y E + CL
Sbjct: 535 ATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL---GMLND 591
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGL--NIFASLVDSM------------------ 336
I L K G +AA +++ M+ +G I +LVD++
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 337 --------------GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR 382
K G L A+ + + G Y SLI + G L ALR
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
L+D ++ G P+ Y ++I++ K G A M G +P Y +++ +
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
GQ + AM++ + + P T + ++ K ++ A + E K S D
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 4/268 (1%)
Query: 317 MKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV--HMEMRGFGYRPPPTIYVSLIESYVKS 374
++ G P F SL+ + G +D+A++V M + Y + ++I + K
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 375 GKLETALRLWDEMKIAGYR-PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
GK E AL ++ +G PN YT ++ + + GK+D +E GF
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 434 YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
Y+ + + G + A+ M G+ + +Y++L+ L+ + V+ A +L +M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 494 AMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
G + +T + ++ K G ++ A + S GI + F+ L + + G
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 553 SAKPLLETYVNSAAKVDLILYTSILAHL 580
A +L + ++ Y +++ L
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGL 392
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 162/392 (41%), Gaps = 8/392 (2%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L GL R D + MV + GV + N +I L K + + + +
Sbjct: 145 LVRGLARIDQLDKAMCILRVMV---MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
+G D TYN++I + G +A ++ + C TY +++ + +
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A ++ ++M G P + + SLV+ + G L+ V + G Y +L+
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL 428
S + + + M Y P Y ++I K+ L A+ F M + L
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
P TY +L + G +D A++L + N PGL TY ++ LA K L+ A ++
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 489 LLEMKAMG-YSVDVTASDVLMVYIKEGSVDLALRWLRFMGS--SGIRTNNFIIRQLFESC 545
+M G + D+T ++ + + V+ A + L+ + +GIR + + R + +
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY--RLVIQGL 499
Query: 546 MKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
K E A ++E + K D +YT+I+
Sbjct: 500 CKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 134/333 (40%), Gaps = 9/333 (2%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D ET N ++ + G A ++ E M + + + + ++ LA+ +LD A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+ M G P + ++ ++ K G + +A+ + +M G P Y ++I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G E A+R W + G P YT+++E + A+ DM G P TY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
L+ + G ++ + + + GL TY LL L + + D +IL M
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 495 MGYSVDVTASDVLMVYIKEG-----SVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
Y V ++L+ + + ++D + L I T N ++ + K G
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM----SKEG 398
Query: 550 LYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
+ + A LL N+ LI Y S++ L +
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
TYN LI L +A + + M + CL D TY ++ ++K G +D A +L +
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
K PGL + S++D + K G + A++++ +M G P SLI + ++ +
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
E A ++ E G + Y LVI+ K ++++A+ M G P + Y +
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 438 LE 439
++
Sbjct: 531 VK 532
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 4/287 (1%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
V +Y A +EV + + GC D TYNSL+ +G + + + +
Sbjct: 254 VCRYCGSARAIEV----LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
L++ TY ++ +L D ++ M + P + + L++ + KA L A+
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+M P Y +++ + K G ++ A+ L +K P Y VI+
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 407 AKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGL 466
AK G + A+ + M AG P T L+ + ++ A ++ +N G
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG 489
Query: 467 STYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE 513
STY +++ L KK +++A +++ M G D T ++ ++E
Sbjct: 490 STYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEE 536
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I L KA L + F ++ + C D TYN+++ +G+ A E+ ++
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
T C TY +I LAK G + A +L+ +M G P SL+ +A ++
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEE 472
Query: 345 AMKVHMEM--RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A +V E RG G R + Y +I+ K ++E A+ + + M G +P+ +YT +
Sbjct: 473 AGQVLKETSNRGNGIR--GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 403 IESHAKSG 410
++ + G
Sbjct: 531 VKGVEEMG 538
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
Q+ Y P+ Y +L +GL ++R F +M+ + +V N V+ ++K
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC---LPDIVTYNTVLGAMSKEG 398
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
++ + +++ C TYNS+I KGL KA E+Y M D T
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
+I ++ ++ A ++ +E RG + + ++ + K ++ A++V M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 356 GYRPPPTIYVSLIESYVKSG 375
G +P TIY ++++ + G
Sbjct: 519 GCKPDETIYTAIVKGVEEMG 538
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
DT TYNS+I F A +++ M D T+ +I ++ R+D +L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+E+ RG + +L+ + L++A + EM G P L+ + ++
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
KLE AL L++ ++++ + Y ++I K K+D A F + G P TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
++ I A L++ M + G P STY L+ +D + +++ EM++
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 495 MGYSVDVTASDVLMVYIKEGSVD 517
G+S D ++ I +G +D
Sbjct: 636 NGFSGDAFTIKMVADLITDGRLD 658
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 35/381 (9%)
Query: 174 KRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAK 233
K S Y S D + FD + RSR F V CN+VI +
Sbjct: 78 KSGSHYFKSLDDAIDFFDYMVRSRPF-------------------YTAVDCNKVIGVFVR 118
Query: 234 AEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
+ +V+ ++K++ ++ ++N LI F + + + + K D T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGF---------------RPGLNIFASLVDSMGK 338
+ ++ L R+ A LF M GF P + F +L++ +
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
GR+ A + +M G G Y +++ K G ++AL L +M+ +P+ +
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
Y+ +I+ K G A FS+M + G P TY C+++ + G+ A +L M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVD 517
+ P + T+ L++ + + A K+ EM D VT + ++ + K D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 518 LALRWLRFMGSSGIRTNNFII 538
A M S + T N II
Sbjct: 419 DAKHMFDLMASPDVVTFNTII 439
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 21/340 (6%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N +I +F+ P A +Y ME L+ ++ ++I +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
GF+P + F +L+ + R+ A+ + FGY V++G LE
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALAL------FGY-------------MVETGFLE- 209
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A+ L+D+M G P + +I G++ A + + M G TY ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
G A+ L + M ++P + Y+ ++ L A + EM G +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 500 DVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+V + ++ + G A R LR M I + L + +K G A+ L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 559 ETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGA 598
+ ++ D + Y S++ + + +H+ ++ +
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 192/457 (42%), Gaps = 49/457 (10%)
Query: 81 YLDESG-SVIYKGKGVRSVEPGLDDHVMVGDVKKPFM--NALAV--AKIVEVVKRWKWGP 135
YLDE IY G S E D V V + + NA++V ++ VV + W
Sbjct: 155 YLDEDTYKTIY---GELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSC 211
Query: 136 ELDTQLDKLQFVPNMTHVTQALKVVNDGD-AGLSLFRWAKRQSWYSPSDDCYVMLFDGLN 194
E++ +L +++ V + V + LK + + L+ F W S V
Sbjct: 212 EVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTV------- 264
Query: 195 RSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKI 254
+ N+ + +L N V ++ + ++++ AG +
Sbjct: 265 ------------------TYNAALRVLARPNSVAEFWSVVDEMKT----------AGYDM 296
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR--LDAAFK 312
D +TY + F + + ++YE M L++ L+ S LD F+
Sbjct: 297 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFR 356
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
+ ++ + G ++ + S+ GR D A ++ MR GY P Y L+
Sbjct: 357 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 416
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K+ +LE A + D+M+ G P+ +T++I+ H K+ +LD A++ F++M + GF +
Sbjct: 417 KAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN 476
Query: 433 TYACLLEMHAASGQIDHA-MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
L++ + + A + L + NA ++P STY +L+ L K + A +L
Sbjct: 477 LLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQM 536
Query: 492 MKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGS 528
MK Y A D + K G+++ A ++L + S
Sbjct: 537 MKKQNYPAYAEAFDGYLA--KFGTLEDAKKFLDVLSS 571
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 32/200 (16%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
K +++AG + D TY+ L+ +A + + ME C D T+ ++I K+
Sbjct: 394 KAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKN 453
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTI 363
LD A F M +GF N+ L+D + + A MEM + +P +
Sbjct: 454 NELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQST 513
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGY------------------------------- 392
Y LI+ +K K E AL L MK Y
Sbjct: 514 YKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD 573
Query: 393 RPNFALYTLVIESHAKSGKL 412
P+FA Y VIE+ + G+L
Sbjct: 574 SPSFAAYFHVIEAFYREGRL 593
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 10/213 (4%)
Query: 173 AKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLA 232
A R + Y P + Y L GL +++ + + + D+M A + +IQ
Sbjct: 395 AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM---EAQGCFPDIKTWTILIQGHC 451
Query: 233 KAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLF-LNKGLPYKAFEIYESMEKTSCLLDS 291
K +L+ + CF + + G ID+ + LI F ++ + + E ++ +
Sbjct: 452 KNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQ 511
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS-MGKAGRLDSAMKVHM 350
STY+L+I L K + + A L Q MK + + P +A D + K G L+ A K +
Sbjct: 512 STYKLLIDKLLKIKKSEEALDLLQMMKKQNY-PA---YAEAFDGYLAKFGTLEDAKKF-L 566
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
++ P Y +IE++ + G+L A L
Sbjct: 567 DVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNL 599
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 124/324 (38%), Gaps = 40/324 (12%)
Query: 161 NDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL 220
N + L +F ++Q WY P Y LF L + D LLF+ M+ +
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSE-------- 173
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
G K + Y SLI+++ L KAF E
Sbjct: 174 ------------------------------GLKPTIDVYTSLISVYGKSELLDKAFSTLE 203
Query: 281 SMEKTS-CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
M+ S C D T+ ++I K GR D + EM G + +++D GKA
Sbjct: 204 YMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYV-SLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
G + V +M G P + S+I SY + + ++ G +P+
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITT 323
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+ ++I S K+G S MEK F T TY ++E +G+I+ ++ M
Sbjct: 324 FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMK 383
Query: 459 NAGLRPGLSTYTVLLTLLANKKLV 482
G++P TY L+ + LV
Sbjct: 384 YQGVKPNSITYCSLVNAYSKAGLV 407
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 118/288 (40%), Gaps = 3/288 (1%)
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
TY + L + D A LF+ M G +P ++++ SL+ GK+ LD A M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 353 RGFG-YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGK 411
+ +P + LI K G+ + + EM G + Y +I+ + K+G
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 412 LDIAMSAFSDM-EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+ S +DM E LP T ++ + + Y+ G++P ++T+
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFMGSS 529
+L+ + ++ M+ +S+ VT + V+ + K G ++ R M
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 530 GIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
G++ N+ L + K+GL +L VNS +D + I+
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 16/244 (6%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC--NRVIQYLAKAEKLEVSFCC 243
Y + DG ++ F+ ++ + +M+ D G SL C N +I +
Sbjct: 253 YNTIIDGYGKAGMFEEMESVLADMIED----GDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+ + Q G + D T+N LI F G+ K + + MEK L + TY ++I K
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG---RLDSAMKVHMEMRGFGYRPP 360
+GR++ +F++MK +G +P + SLV++ KAG ++DS ++ + P
Sbjct: 369 AGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP- 427
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ +I +Y ++G L T L+ +M+ +P+ + +I+++ G D A
Sbjct: 428 --FFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD----AVQ 481
Query: 421 DMEK 424
++EK
Sbjct: 482 ELEK 485
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V N VI+ KA ++E F+K++ G K ++ TY SL+ + GL K +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+ + +LD+ + +I ++G L +L+ +M+ R +P FA+++ + G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 342 LDSAMKVHMEM 352
D+ ++ +M
Sbjct: 477 FDAVQELEKQM 487
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 254 IDTE-TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
I TE TY+ L+++F+ G A ++Y+ M L MI K + D A K
Sbjct: 246 IGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALK 305
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
+FQ M +G +P L +L++S+GKAG++ KV+ ++ G++P + +L+ +
Sbjct: 306 IFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALY 365
Query: 373 KSGKLETALRLWDEMKIAGYRP-NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K+ + E L+L+D ++ N LY + S K G + A+ +ME +G +
Sbjct: 366 KANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVST 425
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
S+Y ++ S + A+ +Y M +P TY L+
Sbjct: 426 SSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 47/375 (12%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
++ L++ +K+ + F ++ G + + NS ++ L G KAF ++E M K
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE- 172
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG---LNIFASLVDSMGKAGRLDS 344
+ TY LM+ +A+ ++A ++F+E++ R + ++ + + G+ +
Sbjct: 173 NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYE 232
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM---KIAGYRPNFALYTL 401
++ M+G G+ Y L+ +V+ G+ E AL ++DEM KI+ R + A+Y +
Sbjct: 233 TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKIS-LRED-AMYAM 290
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
I + K K D+A+ F M K G P L+ +G++ K+Y+ + + G
Sbjct: 291 -ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 462 LRPGLSTYTVLLTLL--ANK-----KLVDV-----------------------------A 485
+P T+ LLT L AN+ +L D+ A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 486 AKILLEMKAMGYSVDVTASD-VLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
K+L EM+ G +V ++ + V+ K +AL M + N F L S
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 545 CMKSGLYESAKPLLE 559
C+ L++ + +L+
Sbjct: 470 CIWGSLWDEVEDILK 484
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
LVACN +I L KA K+ + F + ++ G K D T+N+L+T ++++
Sbjct: 319 LVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFD 378
Query: 281 SMEKTS-CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
+ + C L+ Y + + K G + A KL EM+G G + + ++ + K+
Sbjct: 379 MIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKS 438
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK--IAGYRPNFA 397
+ A+ V+ M +P Y+SL+ S + LWDE++ + P+ +
Sbjct: 439 RKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGS-------LWDEVEDILKKVEPDVS 491
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
LY I + A + M + G P T A +L+
Sbjct: 492 LYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQ 533
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 12/370 (3%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
AC VI K L + K+ G K++ + ++ + + +A E ++
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ LD Y + L+K GR++ AF+L QEMK RG P + + +L+D G++
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A+ + EM G G P Y L+ ++G E L +++ MK G +PN +++
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
IE + K+ A FS +E+ P A ++ + +G A K + + L
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQ----KCPENKASFVKGYCEAGLSKKAYKAFVRLEYP-L 554
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS---DVLMVYIKEGSVDLA 519
R S Y L L + ++ A +L +M A Y V+ S ++ + K +V A
Sbjct: 555 RK--SVYIKLFFSLCIEGYLEKAHDVLKKMSA--YRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
M G+ + F + + + + A+ L E K D++ YT +L
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR 670
Query: 580 LVRCQEEKNE 589
++ E +E
Sbjct: 671 YLKLDPEHHE 680
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 166/415 (40%), Gaps = 37/415 (8%)
Query: 185 CYV---MLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
CY M + L + ++F + + D V N L+K ++E +F
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDR-------------VCYNVAFDALSKLGRVEEAF 408
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
++++D G D Y +LI + +G A ++ + M D TY +++ L
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
A++G + ++++ MK G +P + +++ + A ++ A + + P
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE----QKCP 524
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
S ++ Y ++G + A + + ++ Y ++Y + S G L+ A
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLKK 581
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
M P S ++ + A L+++M GL P L TYT+++
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLM-VYIK-----------EGSVDL--ALRWLRFMG 527
+ A + +MK G DV VL+ Y+K +G V A LR
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS 701
Query: 528 SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
++GI + L + K E A L + ++S + D++ YT++++ R
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFR 756
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 138/327 (42%), Gaps = 25/327 (7%)
Query: 180 SPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEV 239
SP Y +L GL R+ + V +++ M + V + +I+ L A K++
Sbjct: 455 SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA---VTNSVIIEGLCFARKVKE 511
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ F ++ C E S + + GL KA++ + +E L S Y +
Sbjct: 512 AEDFFSSLEQK-C---PENKASFVKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFF 564
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
+L G L+ A + ++M PG ++ ++ + K + A + M G P
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK----------- 408
Y +I +Y + +L+ A L+++MK G +P+ YT++++ + K
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 409 ---SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPG 465
GK A + AG Y L++ ++ A +L++ M ++GL P
Sbjct: 685 QGEVGKRK-ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 466 LSTYTVLLTLLANKKLVDVAAKILLEM 492
+ YT L++ K +D+A ++ E+
Sbjct: 744 MVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 133/328 (40%), Gaps = 52/328 (15%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
ACN ++ + + K+ + FK+++ G + TY ++ KG ++
Sbjct: 183 ACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKG----------NL 232
Query: 283 EKTSCLLDSST----YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASL---VDS 335
E+ + LL + Y+ I L +G + A L E+ R + G ++ A L V
Sbjct: 233 EEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRG 292
Query: 336 MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
++ +A V +EM G+ +++I+ Y K+ L AL D+M G + N
Sbjct: 293 FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
Query: 396 FALYTLVIESHAKS-----------------------------------GKLDIAMSAFS 420
+ +L+++ + K G+++ A
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
+M+ G +P Y L++ + G++ A+ L + M G+ P L TY VL++ LA
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLM 508
+ +I MKA G + + V++
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVII 500
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS-- 335
++++M + + D TY +MI + L A LF++MK RG +P + + L+D
Sbjct: 613 LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL 672
Query: 336 ------------MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
G+ G+ A +V E G Y LI+ K LE A L
Sbjct: 673 KLDPEHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 731
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
+D M +G P+ YT +I S+ + G +D+A++ +++ K +P+ S
Sbjct: 732 FDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 140/335 (41%), Gaps = 18/335 (5%)
Query: 261 SLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR 320
+L+ +++ G+ +A ++ ++ C++D ++ + + G++ LF+++K
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQL 210
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG-FGYRPPPTIYVSLIESYVKSGKLET 379
G +A +V ++ + G L+ A + +E FGY+ + I +G+ E
Sbjct: 211 GLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYK-------TFINGLCVTGETEK 263
Query: 380 A----LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
A L L D +AG A+ +V+ K+ A S +ME+ GF YA
Sbjct: 264 AVALILELIDRKYLAGDDLR-AVLGMVVRGFCNEMKMKAAESVIIEMEEIGF--GLDVYA 320
Query: 436 CL--LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
CL ++ + + + A+ + M GL+ +++L + A + E +
Sbjct: 321 CLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFR 380
Query: 494 AMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYE 552
M +D +V + K G V+ A L+ M GI + L + G
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVV 440
Query: 553 SAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEK 587
A L++ + + DLI Y +++ L R E+
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D T ++ + +L ++GR+D A L +E+ + P + L+ + K L +
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 350 MEMRG-FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
EMR F +P + LI++ S L A+ L ++ AG++P+ LY +++
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
K A+ + M++ G P TY L+ + +G+++ A +M +AG P +T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSV-DVTASDVLMVYIKEGSVDLALRWLRFMG 527
YT L+ + K A +L EM+A G + D T + +L K +D + M
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 528 SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
SSG++ + L S +KSG A + + V+S + D Y+++
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 170/393 (43%), Gaps = 21/393 (5%)
Query: 144 LQFVPNMTHVTQALKVVNDGDAGLSLFRWA-KRQSWYSPSDDCYVMLFDGLNRSRD--FD 200
L+F ++ ++ VVND + LF+ K Q + P +++L R+ D
Sbjct: 85 LKFHNSVLQSYGSIAVVNDT---VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSIS 141
Query: 201 GVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
V + + MV N+G+ V + ++ L + +++ + K++ + DT TY
Sbjct: 142 NVHRVLNLMV----NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTY 197
Query: 260 NSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N L+ + +E + M + D ++ ++I N+ S L A L ++
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
GF+P ++ +++ + A+ V+ +M+ G P Y +LI K+G++E
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A M AGY P+ A YT ++ + G+ A+S +ME G P TY LL
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
+ +D M+LY M ++G++ + Y L+ L + K+ + Y+
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK------SGKVAEAYEVFDYA 431
Query: 499 VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
VD + Y +++ L+WL+ G+
Sbjct: 432 VDSKSLSDASAY---STLETTLKWLKKAKEQGL 461
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 123/295 (41%), Gaps = 11/295 (3%)
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRP-GLNIFASLVDSMGKAGRLDSAMKV--HMEMRGFG 356
N KS L A LF + P L S++ S G ++ +K+ H+
Sbjct: 58 NPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPN 117
Query: 357 YRPPPTIYVSLIESYVKS--GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
+RP + ++ L+ ++ + R+ + M G P+ + + S ++G++D
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLL 473
A ++ + P TY LL+ + + + M + ++P L ++T+L+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM---VYIKEGSVDLALRWLRFMGSSG 530
+ N K + A ++ ++ G+ D + +M + +GS A+ + M G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE--AVGVYKKMKEEG 295
Query: 531 IRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQE 585
+ + L K+G E A+ L+T V++ + D YTS++ + R E
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 6/325 (1%)
Query: 151 THVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV 210
T V + + +D +F +A +Q + S +++L L R R F+ L D+++
Sbjct: 52 TRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFN----LIDDVL 107
Query: 211 GDSANSGVSLLVAC-NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFL-N 268
+SG L +I+ A+A+ E F K+ + + N ++ + + +
Sbjct: 108 AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
+G KAFE+++S + ++ +Y L++ + L A++LF +M R P ++
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
+ L+ + G+++ AM++ +M G+ P Y +L+ S + +L A +L MK
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+ G P+ Y +I + + A DM G P +Y L+ G D
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLL 473
K M + G P S L+
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLV 372
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 272 PYKAFEIYESMEKTSCLLDS-STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
P A EI++ + S S++ ++I L + + + + + G+ IF
Sbjct: 64 PLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFT 123
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS-GKLETALRLWDEMKI 389
L+ +A + + +M F + P P +++ V G L+ A L+ ++
Sbjct: 124 YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 390 AGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDH 449
G PN Y L++++ + L IA F M + +P +Y L++ GQ++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 450 AMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV 509
AM+L + M N G P +YT LL L K + A K+L MK G + D+ + +++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 510 -YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSA 565
+ +E A + L M S+G N+ R L G+++ K LE ++
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 225 NRVIQYLAKAEK-LEVSFCCFKKIQDAGCKIDTETYNSLITLF-LNKGLPYKAFEIYESM 282
NR++ L L+ +F FK + G +T +YN L+ F LN L A++++ M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI-AYQLFGKM 216
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ + D +Y+++I + G+++ A +L +M +GF P + +L++S+ + +L
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A K+ M+ G P Y ++I + + + A ++ D+M G PN Y +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I G D +M GF P S CL++ + G+++ A + + G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILL 490
T+ +++ L+ N+ D + KI L
Sbjct: 397 TLHSDTWEMVIPLICNE---DESEKIKL 421
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 1/264 (0%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL-AKS 304
K + +G + E + LI ++ LP K + M + + ++ L +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
G L AF+LF+ + G P + L+ + L A ++ +M P Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
LI+ + + G++ A+ L D+M G+ P+ YT ++ S + +L A M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV 484
G P Y ++ + A K+ + M + G P +Y L+ L ++ + D
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 485 AAKILLEMKAMGYSVDVTASDVLM 508
K L EM + G+S + S+ L+
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLV 372
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELMIPNLAKSGRLDAAFKL 313
D ++N++I+ + G +A E+Y ME+ + + T+ ++P +++G L KL
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 314 FQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVK 373
+ G + + SL D GK GRL+ A+ + ++ P + +LI +
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGF 529
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA-GFLPTPS 432
G E A+ L+ EM G +P+ + ++ + + SG +D F M+ G P+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT---LLANKKLVDVAAKIL 489
Y C+++M+ +GQ++ A+K SM+ L+P S + LL+ + N L +A++ L
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 490 LEMKA--MGYSV 499
E++ +GY V
Sbjct: 647 FEVEPEHVGYHV 658
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 164/405 (40%), Gaps = 48/405 (11%)
Query: 129 KRWKWGPELDTQLDKLQFVPNMTHVT-------QALKVVND-GDAGLSLFRWAKRQSWYS 180
K P+ ++Q +F + +H+T Q L + + G A L W S +S
Sbjct: 81 KELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFS 140
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVG----DSANSGVSLLVACNRVIQYLAKAEK 236
+D+ D R +DF G+ + + G + S + LV R Q EK
Sbjct: 141 HTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEK 200
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC---LLDSST 293
+E D G K D E+ ++ KG I E M K + D +
Sbjct: 201 ME---------NDYGLKRDKESLTLVVKKLCEKG----HASIAEKMVKNTANEIFPDENI 247
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH---- 349
+L+I + +LD A +L EM GF G + ++D + K R K+
Sbjct: 248 CDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVE 307
Query: 350 -----MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
ME RG R T V LI + K + E A+ L+ M G +P+ Y ++I
Sbjct: 308 KVLLEMEFRGVP-RNTETFNV-LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIR 365
Query: 405 SHAKSGKLDIAMSAFSDMEKAGF--LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
S ++ ++ M+ AG+ L Y L++ +++HAM ++ SM G
Sbjct: 366 SLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGC 425
Query: 463 RPGLSTYTVLL-TLLANKKLVDV------AAKILLEMKAMGYSVD 500
+PG+ TY +L+ + AN +L AAK + + Y VD
Sbjct: 426 KPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVD 470
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 177/387 (45%), Gaps = 16/387 (4%)
Query: 134 GPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGL-SLFRWAKRQSWYSPSDDCYVMLFDG 192
G L++ LD+ P++ V ++ L S+F+WA+ + ++ S + + +
Sbjct: 85 GSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNS 144
Query: 193 LNRSRDFD-GVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK--KIQD 249
L ++R+F+ L+FD + D ++ VS + +Y A+A ++ + F+ + +
Sbjct: 145 LCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRY-ARAGMVQQAIRAFEFARSYE 203
Query: 250 AGCKIDTET--YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS------TYELMIPNL 301
CK TE L+ +G +A +Y +E+ +DS+ + +++
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREA-SMY--LERIGGTMDSNWVPSVRIFNILLNGW 260
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
+S +L A KL++EMK +P + + +L++ + R+ AM+V EM+
Sbjct: 261 FRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINF 320
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
++ +I+ ++G+L AL + + + P Y ++++ K+G L A
Sbjct: 321 MVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKM 380
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
M G PT +TY + + + + M LY + AG P TY ++L +L
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLM 508
+ +A ++ EMK G D+ + +L+
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
L +AEKL +++++ K TY +LI + A E+ E M+ ++
Sbjct: 266 LKQAEKL------WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
+ +I L ++GRL A + + P + + SLV + KAG L A K+
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
M G P T Y + + K K E + L+ ++ AG+ P+ Y L+++ + G
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
KL +AM +M+ G P T L+ + ++ A + +++ G+ P T+
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFK 499
Query: 471 VLLTLLANKKLVDVAAKILLEMKAMGYS 498
++ L +K + D+A ++ M ++ +S
Sbjct: 500 MIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 180/467 (38%), Gaps = 30/467 (6%)
Query: 148 PNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFD-GVQLLF 206
P ++ V L+ +D ++ F+W K P+ Y +L L S+ F +Q L
Sbjct: 80 PEISRVL--LRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLC 137
Query: 207 DEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAG--CKIDTETYNSLIT 264
+ +I+ +K E+++V F+ + A C D ++ L+
Sbjct: 138 E-------------------LIELTSKKEEVDV----FRVLVSATDECNWDPVVFDMLVK 174
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
+L GL + F ++ + + + T ++ L K ++ ++++ M G P
Sbjct: 175 GYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHP 234
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
F L + +M G+ P Y +L+ SY + G+L+ A L+
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
M P+ YT +I+ K G++ A F M G P +Y L+ +
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS 504
G + + KL + M + P T V++ + + A ++E++ + +
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC 414
Query: 505 DVLMVYIKEGSVDLALRWL--RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYV 562
D L+V + + A + L R + G L ES + E A L
Sbjct: 415 DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLK 474
Query: 563 NSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAHSFMCG 609
N +D Y +++ L R + LM+ + ++ K SF+CG
Sbjct: 475 NQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 4/283 (1%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
+K+++ G + D TYN+L++ + +G +AF +Y+ M + + D TY +I L K
Sbjct: 259 LEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCK 318
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
GR+ A + F M RG +P + +L+ + K G + + K+ EM G P
Sbjct: 319 DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD-- 421
++E +V+ G+L +A+ E++ F + +I S + GK A D
Sbjct: 379 CKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK-PFAAKHLLDRI 437
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
+E+ G P TY L+E + I+ A+ L + N TY L+ L
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWL 523
A ++ EM D L+ Y KE D A R L
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
+T YNSL+ L G+ A +++ MEK DS ++ MI LA++G A + F
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+EMK +G + F S++ + G G ++ ++H + ++ + +LI+ Y K
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
L A ++D MK + N +T ++ + ++G+ + A+ F DM+++G P T
Sbjct: 319 KCLHYAKTVFDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+ A ++ + + +GL ++ L+TL +D + ++ EM
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 495 MGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
V+ + ++ Y + G ++ M G++ + + + +C ++GL E
Sbjct: 435 RD---AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 555 K 555
+
Sbjct: 492 Q 492
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
++ +++ + G +A +I+ M+++ D T I A L+ + +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G + + SLV GK G +D + ++ EM + +++ +Y + G+
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN----VRDAVSWTAMVSAYAQFGRA 453
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTPSTYAC 436
++L+D+M G +P+ T VI + +++G ++ F M + G +P+ Y+C
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV---AAKILLEM 492
++++ + SG+++ AM+ N M P +T LL+ NK +++ AA+ L+E+
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 146/335 (43%), Gaps = 7/335 (2%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F K+ +I+ +S++ + G +A+++++ +T+ LD Y + L K
Sbjct: 349 FNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGK 408
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
G+++ A +LF+EM G+G P + + +L+ G+ A + +EM G G P I
Sbjct: 409 LGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVI 468
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y L +G + A M+ G +P + + +VIE +G+LD A + + +E
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ A +++ A+G +DHA + + + P +T+ +L A K +
Sbjct: 529 HK----SRENDASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYIS 582
Query: 484 VAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 542
A +L M +G + + L+ + + +V A + + + I + F +
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 543 ESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
+ + + A L E K D++ Y+ +L
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 162/407 (39%), Gaps = 44/407 (10%)
Query: 206 FDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL 265
FD M+ +V N + LA + +F K +++ G K T+N +I
Sbjct: 451 FDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEG 510
Query: 266 FLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG 325
++ G KA YES+E S D+S M+ +G LD AF+ F ++ F
Sbjct: 511 LIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHAFERFIRLE---FPLP 563
Query: 326 LNIFASLVDSM-GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
+++ +L S+ + + A + M G P ++Y LI ++ + + A +
Sbjct: 564 KSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF 623
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL------ 438
+ + P+ YT++I ++ + + A + F DM++ P TY+ LL
Sbjct: 624 EILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL 683
Query: 439 ----EMHAAS------------------GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
EM A + L+ M + P + TYTVLL
Sbjct: 684 DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVY-IKEGSVDLALRWLRFMGSSGIRTNN 535
+ L EMKA DV VL+ + K G + A R M SG+ +
Sbjct: 744 PERNLSR-------EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVR 582
L C K G + AK + + + S K D++ YT+++A R
Sbjct: 797 APYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 41/296 (13%)
Query: 229 QYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCL 288
Y++KA+ L ++ G + + Y LI + KA E +E + +
Sbjct: 579 DYISKAQDL------LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
D TY +MI + A+ LF++MK R +P + ++ L++S D + +
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDM 685
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD----------------------- 385
EM F P Y +I Y L+ L+
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 386 -----EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
EMK +P+ YT++I+ K G L A F M ++G P + Y L+
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
G + A +++ M +G++P + YT L+ V A K++ EM G
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 14/225 (6%)
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
++ F+ ++ K D TY+ L LN ++ ME + D Y +MI
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVL----LNSD---PELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
L + LF++MK R P + + L+ + K R + EM+ F +P
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPER-----NLSREMKAFDVKP 759
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAF 419
Y LI+ K G L A R++D+M +G P+ A YT +I K G L A F
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 420 SDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
M ++G P Y L+ +G + A+KL M G++P
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 19/326 (5%)
Query: 170 FRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEM-VGDSANSGVSLLVACNRVI 228
F W + YV++ L R+ D + ++ L + + ++ N V L I
Sbjct: 204 FFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYL----NFI 259
Query: 229 QYLAKAEKLEVSFCCFKKIQDAGCKIDTE----TYNSLITLFLNKGLPYK-----AFEIY 279
+ L + ++++ + ++DA +D Y ++ +GL Y+ A +
Sbjct: 260 EGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVV-----RGLCYEMRIEDAESVV 314
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKA 339
MEK D Y +I K+ + A +F +M + R I +S++ +
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G A + E R Y ++ K GK+E A+ L+ EM G P+ Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
T +I GK A +M+ G P Y L A +G A + M N
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVA 485
G++P T+ +++ L + +D A
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D Y +I + + K + +++ M++ + D TY +++ N K R L
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPER-----NLS 749
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+EMK +P + + L+D K G L A ++ +M G P Y +LI K
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
G L+ A ++D M +G +P+ YT +I ++G + A+ +M + G PT ++
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 145/326 (44%), Gaps = 4/326 (1%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
Y+S+IT++ L KA E+ + M++ L + +M+ ++ G+++ A + M+
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
GF P + + +L+ GK ++++A + + G P T Y S+IE + ++ E
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 379 TALRLWDEMKIAGYRPN-FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
A + E+K GY+PN F L+TL I AK G D A+ DM G S +
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTL-INLQAKYGDRDGAIKTIEDMTGIG-CQYSSILGII 459
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
L+ + G+ID + + +R ++++ L+ +VD +L E K
Sbjct: 460 LQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDS 519
Query: 498 SVDVTASDVLMVYIKE-GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKP 556
+ + +L+ KE G + A++ S N I + + G + A+
Sbjct: 520 AFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEK 579
Query: 557 LLETYVNSAAKVDLILYTSILAHLVR 582
L +S +D I ++ ++ V+
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVK 605
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 6/321 (1%)
Query: 215 NSGVSL-LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKI--DTETYNSLITLFLNKGL 271
+SGV L + + V++ KA LE + C +I D I D + ++ ++ L
Sbjct: 586 SSGVVLDRIGFSIVVRMYVKAGSLEEA-CSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDL 644
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
K +Y + K+ + Y +I A++ LD F+EM GF P F
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
L+D GKA ++ + + G + Y ++I +Y K+ M+ G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVVDVIS-YNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
+ + Y +++++ K +++ S M+K+ P TY ++ ++ G ID
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVY 510
+ + +GL P L +Y L+ +V+ A ++ EM+ D VT ++++
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 511 IKEGSVDLALRWLRFMGSSGI 531
+ A++W +M GI
Sbjct: 884 RRNDEFLEAIKWSLWMKQMGI 904
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 135/333 (40%), Gaps = 10/333 (3%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
Y P+ L + + D DG ++M G L + ++Q K K++
Sbjct: 415 YKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGI----ILQAYEKVGKID 470
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
V C K +++ +++SL+ ++ G+ + + +S Y L+I
Sbjct: 471 VVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLI 530
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
+ +SG+L A K++ L+I ++++D G A K+++ ++ G
Sbjct: 531 CSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVV 590
Query: 359 PPPTIYVSLIESYVKSGKLETA---LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
+ ++ YVK+G LE A L + DE K P+ L+ ++ + K D
Sbjct: 591 LDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK--DIVPDVYLFRDMLRIYQKCDLQDKL 648
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
+ + K+G Y C++ A + +D + M G P T+ VLL +
Sbjct: 649 QHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDV 708
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
KL ++ L K G VDV + + ++
Sbjct: 709 YGKAKLFKKVNELFLLAKRHGV-VDVISYNTII 740
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 120/327 (36%), Gaps = 43/327 (13%)
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
+ +I K G + A K F M G RP + L+ K ++ A M
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 353 RGFG------YRPPPTIYVSL----------------------------IESYVKSGKLE 378
R FG Y TIY L + +Y + GK+E
Sbjct: 272 RKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKME 331
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A + M+ AG+ PN Y +I + K K++ A F + G P ++Y ++
Sbjct: 332 LAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
E + + A Y + G +P L+ L A D A K + +M +G
Sbjct: 392 EGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ 451
Query: 499 VDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
+L Y K G +D+ L+ + IR N L + +K G+ + LL
Sbjct: 452 YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL 511
Query: 559 --ETYVNSAAKVDLILYTSILAHLVRC 583
+ + +SA + S L HL+ C
Sbjct: 512 REKKWRDSA-------FESHLYHLLIC 531
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 262 LITLFLNKG---LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
L LF+N G + Y A + +S+E + +L +S A K F M+
Sbjct: 116 LENLFVNNGEIDVNYSAIKPGQSLEHCNGILKR----------LESCSDTNAIKFFDWMR 165
Query: 319 GRGFRPGLNIFASLV-DSMGKAGRLDSAMKVHMEMRGFG-YRPPPTIYVSLIESYVKSGK 376
G G + SL+ +G+ D A + E+ GF ++ ++ ++I + K G
Sbjct: 166 CNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGN 225
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
++ A + + M G RPN A +++ + K+ ++ A AFS M K G + S Y+
Sbjct: 226 VKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIV-CESAYSS 284
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
++ ++ D A ++ + M +R L + V+L + + +++A IL+ M+A G
Sbjct: 285 MITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAG 344
Query: 497 YSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
+S ++ A + L+ Y K ++ A + + G+ + R + E ++ YE AK
Sbjct: 345 FSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAK 404
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
++P+ + +L D +++ F V LF + GV +++ N +I K +
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLL----AKRHGVVDVISYNTIIAAYGKNKDYT 750
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
K +Q G + E YN+L+ + K I + M+K++ D TY +MI
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
+ G +D + +E+K G P L + +L+ + G G ++ A+ + EMRG
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 359 PPPTIYVSLIESYVKSGKLETALR--LW 384
P Y +L+ + ++ + A++ LW
Sbjct: 871 PDKVTYTNLVTALRRNDEFLEAIKWSLW 898
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 127/310 (40%), Gaps = 37/310 (11%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
++ E + ++ + +G A I SME + Y +I K +++AA
Sbjct: 311 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
LF + G P + S+++ G+A + A + E++ GY+P +LI
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQA 430
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA---------------MS 417
K G + A++ ++M G + + ++ ++++++ K GK+D+ +
Sbjct: 431 KYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQT 489
Query: 418 AFSDMEKA-----------GFLPTPSTYACLLEMH---------AASGQIDHAMKLYNSM 457
+FS + A G L E H SGQ+ A+K+YN
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSV 516
+ L + ++ + A K+ L +K+ G +D + S V+ +Y+K GS+
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 517 DLALRWLRFM 526
+ A L M
Sbjct: 610 EEACSVLEIM 619
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 142/333 (42%), Gaps = 9/333 (2%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
++A N +I K K+E + F ++ + G + D +Y S+I + +A Y+
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
+++ +S +I AK G D A K ++M G G + +I ++ + K G
Sbjct: 409 ELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVG 467
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
++D V R T + SL+ +YVK G ++ L L E K LY
Sbjct: 468 KIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYH 527
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
L+I S +SG+L A+ ++ ++ + +++++ G+ A KLY ++ ++
Sbjct: 528 LLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSS 587
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS-----DVLMVYIKEGS 515
G+ +++++ + ++ A +L + M D+ D+L +Y K
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVL---EIMDEQKDIVPDVYLFRDMLRIYQKCDL 644
Query: 516 VDLALRWLRFMGSSGIRTNNFIIRQLFESCMKS 548
D + SGI N + + C ++
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 179/428 (41%), Gaps = 56/428 (13%)
Query: 137 LDTQLDKLQFVPNMTHVTQALKVV-----NDGDAGLSLFRWAKRQSWYSPSDDCYVM--L 189
L + + L+F N +V L V + G +G +L R+ K W + +++ V L
Sbjct: 137 LRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLK---WATQNEEITVTTSL 193
Query: 190 FDGL-------NRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFC 242
+ L R D G+ L E +G+ + GV L N +I K K + +F
Sbjct: 194 VESLLVAIASDTRRMDAYGLWDLVKE-IGEKESCGVLNLEILNELIALFGKLGKSKAAFD 252
Query: 243 CFKKIQDAGCKIDTETY-----------------------------------NSLITLFL 267
F K ++ G + +TY ++IT F
Sbjct: 253 VFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFC 312
Query: 268 NKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS-GRLDAAFKLFQEMKGRGFRPGL 326
+G +A+ +YE + L +I L K+ G + A ++ ++ G R G+
Sbjct: 313 KEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGI 372
Query: 327 NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
F+ ++ S+ + + A + ++M G P ++ ++ + K+G L+ A +
Sbjct: 373 KPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432
Query: 387 MKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ 446
M+ G +P+ YT++I +AK G +D A ++ +K +P TY L+ + +
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 447 IDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL-EMKAMGYSVDVTASD 505
D A+KL N M G++P Y L+ K L A++L EMK G ++ S
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAI-SQ 551
Query: 506 VLMVYIKE 513
L+ +KE
Sbjct: 552 GLIRAVKE 559
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 2/218 (0%)
Query: 363 IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
I LI + K GK + A ++ + + G+ PN Y L +E+ K +D A S M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN-SMTNAGLRPGLSTYTVLLTLLANKKL 481
K+G L ++ G+ + A +Y + T P T++ L N
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 482 VDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
+ A ++L ++ + SDV+ + +V A L M S G N +
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
+ +C K+G + AK +L+ + K D+ YT I++
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS 450
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 170/415 (40%), Gaps = 18/415 (4%)
Query: 219 SLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEI 278
S+L AC ++ E LE+ + G DT N+L++L+ + G A I
Sbjct: 293 SVLSACKKI-------ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 279 YESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK 338
+ +M + D+ TY +I L++ G + A +LF+ M G P N ASLV +
Sbjct: 346 FSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 339 AGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
G L ++H G+ I +L+ Y K +ETAL + E ++ N L
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV----ENVVL 457
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+ +++ ++ L + F M+ +P TY +L+ G ++ ++++ +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDL 518
+ +VL+ + A +D A IL+ + G V V+ + ++ Y + D
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI--RFAGKDV-VSWTTMIAGYTQYNFDDK 574
Query: 519 ALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
AL R M GIR++ + +C + + + S DL +++
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 579 HLVRCQEEKNERHLMSILGATKHKAHSFMCGLFTGPEHRGQPVLSFVREFFQGVD 633
RC + + A + A + + F + + + FVR +G+D
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 113/277 (40%), Gaps = 15/277 (5%)
Query: 217 GVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
G++ V+ +Q L + +++ C +G D N+L+TL+ G +++
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACV------SGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
+E E D+ + ++ +SG + A ++F M G F S V +
Sbjct: 647 LAFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
+ + +VH + GY + +LI Y K G + A + + E+ N
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST----KNE 758
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
+ +I +++K G A+ +F M + P T +L + G +D + + S
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 818
Query: 457 MTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
M + GL P Y ++ +L L+ A + + EM
Sbjct: 819 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 13/303 (4%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G + T N LI L+ G A +++ + L D S++ MI L+K+ A
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR----LKDHSSWVAMISGLSKNECEAEA 272
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+LF +M G P F+S++ + K L+ ++H + G+ + +L+
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y G L +A ++ M + + Y +I ++ G + AM F M G P
Sbjct: 333 YFHLGNLISAEHIFSNMS----QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILL 490
+T A L+ +A G + +L+ T G LL L A ++ A L
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 491 EMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
E + +V +V++V Y + + R R M I N + + ++C++ G
Sbjct: 449 ETEVE----NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 550 LYE 552
E
Sbjct: 505 DLE 507
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 196/489 (40%), Gaps = 35/489 (7%)
Query: 117 NALAVAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKR- 175
N L I +V++R W L+ + + N V L+ ++ L + W
Sbjct: 43 NPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNF 102
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
Y+ +L + L R G LL E++ + +SG ++ + +
Sbjct: 103 DPVYAKDQSLKSVLGNALFRK----GPLLLSMELLKEIRDSGYR--ISDELMCVLIGSWG 156
Query: 236 KLEVSFCC---FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSS 292
+L ++ C F +I G K T YN++I + A+ ++ M C D
Sbjct: 157 RLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRF 216
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
TY ++I + K G +D A +L ++M+ G RP + + L+D AGR+D A+K M
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLW-------DEMKIAGYRPNFALYTLVIES 405
R P + + + A + ++ GY + LY L S
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGY--DAVLYCLSNNS 334
Query: 406 HAK-SGKLDIAMSAFSDMEKAGFLPTPSTY----ACLLEMHAASGQIDHAMKLYNSMTNA 460
AK +G+ + + G++P ST+ +CLL+ H + ++++ +
Sbjct: 335 MAKETGQF------LRKIGERGYIPDSSTFNAAMSCLLKGH----DLVETCRIFDGFVSR 384
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASD-VLMVYIKEGSVDLA 519
G++PG + Y VL+ L N + + L +M G V + + V+ K ++ A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+L M GI N G + +LE + K D+I ++ I+
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 580 LVRCQEEKN 588
L R +E K+
Sbjct: 505 LCRAKEIKD 513
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 1/303 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
Y++++ N + + + + + + DSST+ + L K L ++F
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
RG +PG N + LV ++ A R + +M G Y ++I+ K+ ++E
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A EM+ G PN + + ++ G + + GF P T++ ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
+ +I A + M G+ P TY +L+ + D + K+ +MK G S
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 499 VDVTASD-VLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
D+ A + + + K V A L+ M G++ +NF L ++ +SG A+ +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 558 LET 560
+
Sbjct: 623 FSS 625
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P + Y++L L ++ F +M D S V + N VI L KA ++E +
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSV---YSYNAVIDCLCKARRIENA 444
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
++QD G + T+N+ ++ + +G K + E + D T+ L+I
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
L ++ + AF F+EM G P + L+ S G D ++K+ +M+ G P
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
Y + I+S+ K K++ A L M G +P+ Y+ +I++ ++SG+ A FS
Sbjct: 565 LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 421 DMEKAGFLPTPSTYACLLEM 440
+E+ G +P T + E+
Sbjct: 625 SIERHGCVPDSYTKRLVEEL 644
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 153/362 (42%), Gaps = 40/362 (11%)
Query: 227 VIQYLAKAEKLEVSFCC------FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
VI+Y + +S C F+ + G D TYN+L+ + + +P+K E
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M +T + D Y +I + K G+L+ A ++++EM P + ++ L+++ G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ AM M+ G IY SLI+ Y K G L+ A A+Y
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE---------------AIYR 669
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+++S K+ P T C++ +++ + A +++SM
Sbjct: 670 KLLQSCNKTQ-----------------YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR 712
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLA 519
G T+ ++L + + A +I +M+ M D ++ + VL ++ +G A
Sbjct: 713 G-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 520 LRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAH 579
+ + M SSGI+ ++ + L MK G+ + A +E K L L+ S L+
Sbjct: 772 VETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSS 831
Query: 580 LV 581
LV
Sbjct: 832 LV 833
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++Q LA A+ C +K+++ G D Y ++I+ F+ G A E+Y+ M +
Sbjct: 544 NTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
+ D Y ++I A +G + A + MK G I+ SL+ K G LD
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 345 AMKVHME-MRGFGYRPPPTIYVS--LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
A ++ + ++ P +Y S +I Y + + A ++D MK G F + +
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT-FAM 722
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
++ + K+G+ + A M + L P +Y +L + A G+ A++ + M ++G
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSG 782
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
++P ST+ L T+L + A + + E++
Sbjct: 783 IQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 98/488 (20%), Positives = 197/488 (40%), Gaps = 45/488 (9%)
Query: 130 RWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQS--WYSPSDDCYV 187
+W++ L ++ + P + + V + G + W + S P +
Sbjct: 202 KWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTG 261
Query: 188 MLFDGLNRSRDFDGVQLLFDEMVGDS--ANSGVSLL-VACNRVIQYLAKAEKLEVSFCCF 244
++ ++R+F + F + D A+S V L N +I K+ +++ + F
Sbjct: 262 IVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETF 321
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
K++ + G T T+N++I ++ N G + + ++M K C D+ TY ++I K+
Sbjct: 322 KRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKN 380
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
++ A F+EMK G +P + +L+ + ++ A + EM
Sbjct: 381 NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ 440
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
+L YV++ LE + + +AG + Y+ I+++ + G L A F ++
Sbjct: 441 SALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG-YSANIDAYGERGYLSEAERVFICCQE 499
Query: 425 AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL--- 481
T Y +++ + S + A +L+ SM + G+ P TY L+ +LA+ +
Sbjct: 500 VN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 482 --------------------------------VDVAAKILLEMKAMGYSVDVTASDVLM- 508
+++A ++ EM DV VL+
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 509 VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
+ G+V A+ ++ M +GI N+ I L + K G + A+ + + S K
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 569 DL-ILYTS 575
+YTS
Sbjct: 679 QYPDVYTS 686
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 260 NSLITLFLNKGLPY-KAFEIYESMEKTSCL-LDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
N T+ L + + + +A EI+E + C L+ Y +M+ L K+ + L+ EM
Sbjct: 154 NKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEM 213
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM-----EMRGFGYRPPPTIYVSLIESYV 372
+G +P + + +L+D K G +KVH +M G +P +++ Y
Sbjct: 214 IRKGIKPINSTYGTLIDVYSKGG-----LKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 373 KSGKLETA---LRLW--DEMKIAGYRP-NFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
K+ + + A + W DE K + + Y +I+++ KSG++ A F M + G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
+PT T+ ++ ++ +GQ+ L +M P TY +L++L ++ A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAG 387
Query: 487 KILLEMKAMGYSVDVTASDVLM 508
EMK G D + L+
Sbjct: 388 AYFKEMKDDGLKPDPVSYRTLL 409
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/426 (18%), Positives = 163/426 (38%), Gaps = 13/426 (3%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
+ + +F W K + Y + Y ++ L ++ + VQ L+DEM+ G+ + +
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMI----RKGIKPINS 223
Query: 224 C-NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY--- 279
+I +K + C K+ G + D T ++ ++ KA E +
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 280 ---ESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
E+ + L S TY MI KSG++ A + F+ M G P F +++
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY 343
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
G G+L + M+ P Y LI + K+ +E A + EMK G +P+
Sbjct: 344 GNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
Y ++ + + ++ A ++M+ T + L M+ + ++ + +
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSV 516
AG Y+ + + + A ++ + + + + + ++ Y S
Sbjct: 463 FHVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSC 521
Query: 517 DLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
+ A M S G+ + L + + + + LE + D I Y ++
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 577 LAHLVR 582
++ V+
Sbjct: 582 ISSFVK 587
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 17/250 (6%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
T+N++I+ + GL Y E+YE M+ + D T ++ + A G ++ + +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYVKSG 375
+ GF P + + + + + G L A V F P ++ + ++I Y G
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAV------FDIMPVKSLVSWTAMIGCYGMHG 337
Query: 376 KLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFL-PTPSTY 434
E L L+D+M G RP+ A++ +V+ + + SG D + F M++ L P P Y
Sbjct: 338 MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA----AKIL- 489
+CL+++ +G++D AM+ SM + P + + LL K VD+A AK++
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMP---VEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 490 LEMKAMGYSV 499
E +GY V
Sbjct: 455 FEPNNIGYYV 464
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 19/317 (5%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+ GC+ + +LI+++ GL A +++E ++S L S Y +I + +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQL--SVCYNALISGYTANSK 136
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
+ A +F+ MK G LV L +H + G + S
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
I Y+K G +E RL+DEM + G + VI ++++G + + M+ +G
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 427 FLPTPSTYACLLE--MHAASGQIDHAM-KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
P P T +L H + +I H + KL S G P + +++ A +
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES---NGFVPNVFVSNASISMYARCGNLA 309
Query: 484 VAAKI--LLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
A + ++ +K++ V+ + ++ Y G ++ L M GIR + + +
Sbjct: 310 KARAVFDIMPVKSL-----VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 542 FESCMKSGLYESAKPLL 558
+C SGL + L
Sbjct: 365 LSACSHSGLTDKGLELF 381
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 8/250 (3%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F+++++ G +D+ T L+ L + ++ K + + I K
Sbjct: 144 FRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
G ++A +LF EM +G L + +++ + G ++++ +M+ G P P
Sbjct: 204 CGSVEAGRRLFDEMPVKG----LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
VS++ S G + + ++ G+ PN + I +A+ G L A + F M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ + C + G + + L++ M G+RP + + ++L+ ++ L D
Sbjct: 320 VKSLVSWTAMIGC----YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 484 VAAKILLEMK 493
++ MK
Sbjct: 376 KGLELFRAMK 385
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
NRV++ +K + F +I+ G K D TY +++ +F G + ++ M++
Sbjct: 93 NRVLKAHPPMQKAWLFFNWAAQIK--GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKE 150
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
L+D+ TY +I ++ SG +D A +L++EM+ G P + + + + + GR++
Sbjct: 151 KGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEE 210
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A +V+ EM P Y L+E V +GK E AL ++ +M+ G +P+ A ++I
Sbjct: 211 ATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIA 270
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
K G+ M++ G + + LE A+G+ D ++ NS
Sbjct: 271 KALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNS 322
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
+GF+ + +++D G+AGR+ S V M+ G Y SLI SG ++
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A+RLW+EM+ G P YT ++ G+++ A + +M ++ P TY L+E
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
A+G+ + A+ ++ M G++P + +L+ ++L+ MK G
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 356 GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
G++ Y ++++ + ++G++++ ++ MK G + YT +I + SG +D A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 416 MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
M + +M G PT +Y ++M A G+++ A ++Y M + + P TYTVL+
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 476 LANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTN 534
L + A I +M+ +G D A ++L+ +K G R L +M +G+
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLR 296
Query: 535 NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSI 576
I + E+ +G ES L E VNS V+ + + I
Sbjct: 297 YPIFVEALETLKAAG--ESDDLLRE--VNSHISVESLCSSDI 334
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D TY M+ ++GR+ + + +F MK +G + SL+ + +G +D AM++
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
EMR G P Y + ++ G++E A ++ EM + PN YT+++E +
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
GK + A+ F M++ G P + L+ G+ ++ M G+
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 388 KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQI 447
+I G++ + YT +++ ++G++ S F M++ G L TY L+ ++SG +
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 448 DHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVL 507
D AM+L+ M + G P + +YT + +L V+ A ++ EM S + VL
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 508 MVY-IKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
M Y + G + AL M G++ + L +K G
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFG 276
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 112/266 (42%), Gaps = 12/266 (4%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYS 180
V+ I ++K W + QL L + + + LK F WA + +
Sbjct: 61 VSNIYNILKYSNWDSAQE-QLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFK 119
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEV 239
Y + D + + +F M GV + V +I +++ + ++
Sbjct: 120 HDHFTYTTMLDIFGEAGRIQSMYSVFHLM----KEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ +++++D GC+ +Y + + + G +A E+Y+ M ++ + TY +++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRP---GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
L +G+ + A +F +M+ G +P NI + G+ + + V+M+ G
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVL-VYMKENGVV 294
Query: 357 YRPPPTIYVSLIESYVKSGKLETALR 382
R P I+V +E+ +G+ + LR
Sbjct: 295 LRYP--IFVEALETLKAAGESDDLLR 318
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 127/312 (40%), Gaps = 40/312 (12%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA 223
++ + +F + Q WY P+ YV L L + + + LF EM+ +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINE----------- 179
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
GC ++ E Y +L++ + G AF + E M+
Sbjct: 180 ---------------------------GCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 284 KT-SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ +C D TY ++I + + D L +M+ +G RP + +L+D+ GKA
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 343 DSAMKVHMEMRGF-GYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
++M G +P S + ++ +G++E +++ + +G PN + +
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 332
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+++S+ KSG + M+K + T TY +++ +G + L+ M +
Sbjct: 333 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 392
Query: 462 LRPGLSTYTVLL 473
+ P T L+
Sbjct: 393 IFPSCVTLCSLV 404
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
Y LI + P KA E+++ M C+++ Y ++ ++SGR DAAF L + MK
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 319 -GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGK- 376
+P ++ ++ L+ S + D + +MR G RP Y +LI++Y K+
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
+E L + +P+ + + +G++++ + + + +G P T+
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 332
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
LL+ + SG + M + TY V++ + + M++
Sbjct: 333 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 392
Query: 497 -YSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
+ VT ++ Y + D LRF+ +S IR + L ++ + + K
Sbjct: 393 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 452
Query: 556 PLLETYVNSAAKVDLILYTSIL 577
+LE K D I Y +++
Sbjct: 453 GVLELMEKKGFKPDKITYRTMV 474
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 13/303 (4%)
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR-GFGYRPPPTIY 364
R +A + ++ KG + SL + + A R +SA++V +R Y+P IY
Sbjct: 95 RREATKSIIEKKKGSKKLLPRTVLESLHERI-TALRWESAIQVFELLREQLWYKPNVGIY 153
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
V LI K + E A L+ EM G N +YT ++ ++++SG+ D A + M+
Sbjct: 154 VKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKS 213
Query: 425 A-GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
+ P TY+ L++ D L + M G+RP TY L+ K+
Sbjct: 214 SHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 484 VAAKILLEM------KAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFI 537
L++M K ++++ T L + G +++ SSGI N
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNST----LRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 538 IRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILG 597
L +S KSG Y+ ++E ++ Y ++ R + K +L ++
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 598 ATK 600
+ +
Sbjct: 390 SER 392
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 110/287 (38%), Gaps = 37/287 (12%)
Query: 175 RQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKA 234
R+ P+ Y L D +++ F ++ +M+G+ S + N ++
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM--NSTLRAFGGN 305
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
++E+ C++K Q +G + + T+N L+ + G K + E M+K TY
Sbjct: 306 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 365
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG 354
++I ++G L LF+ M+ P SLV + G+A + D
Sbjct: 366 NVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKAD----------- 414
Query: 355 FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDI 414
K+ LR + I R + + +++++ + K
Sbjct: 415 ---------------------KIGGVLRFIENSDI---RLDLVFFNCLVDAYGRMEKFAE 450
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
MEK GF P TY +++ + SG H +L+ + + G
Sbjct: 451 MKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVG 497
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
E ++ +++ ++ L + G + A F MK +P + + ++++++ + G
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNF 216
Query: 343 DSAMKV--HMEMRGFGYRPPPTIYVSLIESYVKSG-----------KLETALRLWDEMKI 389
A + M++ GF Y P Y LI SY + G ++ A R++ EM
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 390 AGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDH 449
G+ P+ Y +I+ K+ ++ A+ F DM+ G +P TY + ++ + +I+
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 450 AMKLYNSMTNAGLR-PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
A+++ +M G PG STYT L+ L + A +++EM G
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 14/267 (5%)
Query: 193 LNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGC 252
L + DF G+ ++ V + +++ L + ++ + F ++++ C
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL--DSSTYELMIPNLAKSG----- 305
K D YN++I G KA + + M+ D+ TY ++I + + G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 306 ------RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRP 359
R+ A ++F+EM RGF P + + L+D K R+ A+++ +M+ G P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR-PNFALYTLVIESHAKSGKLDIAMSA 418
Y S I Y + ++E A+ + MK G+ P + YT +I + ++ + A
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASG 445
+M +AG +P TY + + ++ G
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
L+ +G+ G + A+ M+ + +P Y ++I + + G + A L D+M++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 392 YR--PNFALYTLVIESHAKSG-----------KLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+R P+ YT++I S+ + G ++ A F +M GF+P TY CL+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
+ + +I A++L+ M G P TY + + ++ A +++ MK +G+
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 499 VDVTASDVLMVY 510
V +++ +++
Sbjct: 351 VPGSSTYTPLIH 362
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
+SL+ L+ + G A++++E M + + + ++ MI A+ R+D KL+ +M+
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVV----SWTAMISGFAQEWRVDICLKLYSKMRK 214
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
P F +L+ + +G L VH + G + I SLI Y K G L+
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME----KAGFLPTPSTYA 435
A R++D+ + + +I +A+ G +AM A E K+G P TY
Sbjct: 275 AFRIFDQFS----NKDVVSWNSMIAGYAQHG---LAMQAIELFELMMPKSGTKPDAITYL 327
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+L +G + K +N M GL+P L+ Y+ L+ LL L+ A +++ M
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENM 384
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 150/326 (46%), Gaps = 26/326 (7%)
Query: 174 KRQSWYSPSDDCYV--MLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYL 231
+ Q WY D YV L D ++ +++FD M D+ N +VA N ++ L
Sbjct: 253 RNQLWY----DVYVETTLIDMYIKTGYLPYARMVFDMM--DAKN-----IVAWNSLVSGL 301
Query: 232 AKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS 291
+ A L+ + +++ G K D T+NSL + + G P KA ++ M++ +
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
++ + +K+G A K+F +M+ G P ++L+ +G L S +VH
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH-- 419
Query: 352 MRGFGYRP----PPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
GF R + +L++ Y KSG L++A+ ++ +K + A + ++ +A
Sbjct: 420 --GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK----NKSLASWNCMLMGYA 473
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGL 466
G+ + ++AFS M +AG P T+ +L + SG + K ++ M + G+ P +
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 467 STYTVLLTLLANKKLVDVAAKILLEM 492
+ ++ LL +D A + M
Sbjct: 534 EHCSCMVDLLGRSGYLDEAWDFIQTM 559
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 46/353 (13%)
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC-LLDSSTYELM 297
VS K+ D K D +N ++ + L G KA E++ M+ + DS+ +L+
Sbjct: 37 VSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLL 96
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM----GKAGRLDSAMKVHMEMR 353
K G F +++ G R GL S+ +S+ + G+L+ + KV M+
Sbjct: 97 QVCSNKEG-----FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
+ S++ SY K G ++ A+ L DEM+I G +P+ + ++ +A G
Sbjct: 152 DRNLSS----WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID-----HAMKLYNSM----------- 457
A++ M+ AG P+ S+ + LL+ A G + H L N +
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLI 267
Query: 458 ---TNAGLRP------------GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-V 501
G P + + L++ L+ L+ A +++ M+ G D +
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 327
Query: 502 TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
T + + Y G + AL + M G+ N +F C K+G + +A
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
K++Q AG K T + +SL+ G I+ + + D +I K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFA--SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
+G L A +F M + NI A SLV + A L A + + M G +P
Sbjct: 273 TGYLPYARMVFDMMDAK------NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
+ SL Y GK E AL + +MK G PN +T + +K+G A+ F
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 422 MEKAGFLPTPSTYACLLEM 440
M++ G P +T + LL++
Sbjct: 387 MQEEGVGPNAATMSTLLKI 405
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 38/343 (11%)
Query: 182 SDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSF 241
S + Y ML +R+ + LF E G + C +V+ + +E +
Sbjct: 282 SSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEM---CLKVVLMYVREGNMETTL 338
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
++ A K+ +++ F + +A ++YE K C TY + I
Sbjct: 339 EVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAY 398
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
+ + + A LF EM +GF + +++++D GK RL A+++ +M+ G +P
Sbjct: 399 CRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNI 458
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
IY SLI+ + ++ L A ++W EMK A P+ YT +I ++ +S +L+ + +
Sbjct: 459 WIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQ- 517
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
E G+ID AM AG+ G+ + T
Sbjct: 518 -----------------EFRMNRGKIDRAM--------AGIMVGVFSKT---------SR 543
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLR 524
+D ++L +MK G +D + +++ ++ +RWL+
Sbjct: 544 IDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQ 586
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 160/401 (39%), Gaps = 10/401 (2%)
Query: 167 LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGD-----SANSGVSLL 221
+ +F K+ PS CY + + + + V LF E + SG
Sbjct: 193 IQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYT 252
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
+ C+ + + E LEV ++++D G +E Y+ LI F ++++
Sbjct: 253 IVCSSLAKSGRAFEALEV----LEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
L D ++ + G ++ ++ M+ + I ++V+ K
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
A+KV+ Y I +Y + K A L+DEM G+ Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG 461
+++ + K+ +L A+ + M++ G P Y L++MH + + A K++ M A
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLAL 520
+ P +YT +++ K ++ ++ E + +D + +++ V+ K +D +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELM 548
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETY 561
R L+ M G R + + + +GL + L E++
Sbjct: 549 RLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESF 589
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 54/323 (16%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
V+Q K E + F +I G +D L+ F G KAFE+ E +E+
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRG-WLDEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
L+ TY ++I K R+D AF+LF++M+ G + ++ L+ + K L+ A+
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 347 KVHMEMRGFGYRPPPTI---------------------------------YVSLIESYVK 373
+++E++ G P I Y SL E +++
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIR 398
Query: 374 SGKLETALRLWDEMKIAGYR-------------------PNFALYTLVIESHAKSGKLDI 414
+ + A + + Y P+ ++VI K+ K+D+
Sbjct: 399 NDLVHEAYSFIQNL-MGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDM 457
Query: 415 AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT 474
A++ D+ + G +P P Y ++E G+ + ++KL M +AG+ P T +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 475 LLANKKLVDVAAKILLEMKAMGY 497
LA + A +L +M+ G+
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGF 540
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 1/219 (0%)
Query: 265 LFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRP 324
L N+G+ + E++ + D Y ++I L K+ R A LF EM +G +P
Sbjct: 589 LIKNEGVD-RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 325 GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLW 384
+ + S++D K G +D + + M P Y SLI SG+ A+ W
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 385 DEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
+EMK PN + +I+ K G A+ F +ME+ P + Y L+ +S
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 445 GQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 483
I+ ++ M + G P +L + K V+
Sbjct: 768 ENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 15/303 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV---------------ACNRVIQY 230
Y LF+G R+ ++G+ + GVS +V + + VI
Sbjct: 389 YKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINC 448
Query: 231 LAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLD 290
L KA K++++ I G YN++I +G ++ ++ M+
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 291 SSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHM 350
T + LA+ A L ++M+ GF P + LV + + GR A K
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 351 EMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSG 410
++ G G+ + I+ +K+ ++ L L+ ++ G+ P+ Y ++I++ K+
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Query: 411 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYT 470
+ A F++M G PT +TY +++ G+ID + M P + TYT
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 471 VLL 473
L+
Sbjct: 689 SLI 691
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 176/414 (42%), Gaps = 32/414 (7%)
Query: 169 LFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV-ACNRV 227
F WA +Q Y Y + L+R+R ++ L V D NS + A
Sbjct: 92 FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKAL----VVDVLNSRCFMSPGAFGFF 147
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAG-CKIDTETYNSLITLFLNKGLPYKAFEIYES----M 282
I+ L A ++ + F ++++ G C + TYN L+ + E+ E+ M
Sbjct: 148 IRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSN--SSSVELVEARLKEM 205
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
D T ++ +G+ + A +F E+ RG+ +I LV S K G++
Sbjct: 206 RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDE-HISTILVVSFCKWGQV 264
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D A ++ + R Y LI +VK +++ A +L+++M+ G + ALY ++
Sbjct: 265 DKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVL 324
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL-------EMHAAS----GQIDH-- 449
I K L++A+S + +++++G P LL E+ + G ID
Sbjct: 325 IGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKS 384
Query: 450 AMKLYNSMTNAGLRPGL--STYTVLLTLLANKKLVDVAAKILLEMKAMGYSV---DVTAS 504
M LY S+ +R L Y+ + L+ N + D ++I+ +K ++ + S
Sbjct: 385 VMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYE-SDGVSEIVKLLKDHNKAILPDSDSLS 443
Query: 505 DVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLL 558
V+ +K VD+A+ L + +G+ + + E K G E + LL
Sbjct: 444 IVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 158/374 (42%), Gaps = 31/374 (8%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
+++T+ +++ F GL Y F E D Y M L+++ R +A+ K
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYR--NDMYAYNAMASILSRA-RQNASLK 126
Query: 313 --LFQEMKGRGF-RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY-RPPPTIYVSLI 368
+ + R F PG F + +G AG +D A V +R G P Y L+
Sbjct: 127 ALVVDVLNSRCFMSPG--AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184
Query: 369 ESYVKSGKLETAL---RLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA 425
E+ KS L RL EM+ G+ + T V++ + +GK + A+S F+++
Sbjct: 185 EAISKSNSSSVELVEARL-KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSR 243
Query: 426 GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA 485
G+L + L+ GQ+D A +L + +R TY VL+ + +D A
Sbjct: 244 GWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKA 302
Query: 486 AKILLEMKAMGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFES 544
++ +M+ MG + D+ DVL+ + K +++AL + SGI + I+ +L
Sbjct: 303 FQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL-- 360
Query: 545 CMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHKAH 604
C S E ++ + K ++LY S+ +R H+A+
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIR--------------NDLVHEAY 406
Query: 605 SFMCGLFTGPEHRG 618
SF+ L E G
Sbjct: 407 SFIQNLMGNYESDG 420
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I L K+ +D +LF+++ G P + + L+ ++ KA R A + EM G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
+P Y S+I+ + K G+++ L M P+ YT +I SG+ A+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+++M+ P T+ L++ G A+ + M + P + Y L++
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFL 765
Query: 478 NKKLVDVAAKILLEMKAMG-YSVDVTASDVLMVYIKEGSVD 517
+ + ++ I EM G + V V + +L V + V+
Sbjct: 766 SSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 89/234 (38%), Gaps = 1/234 (0%)
Query: 212 DSANSG-VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKG 270
D A G + +VA I L K E ++ F+ I G D Y+ LI
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Query: 271 LPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA 330
+A ++ M +TY MI K G +D M P + +
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
SL+ + +GR A+ EM+G P +++LI+ K G AL + EM+
Sbjct: 689 SLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS 444
P+ A+Y ++ S S ++ F +M G P +L ++ S
Sbjct: 749 EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTS 802
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 12/345 (3%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS-STYELMIPNLAKSG 305
I AG + TYN + +L+ P A E Y+ + L S +T+ +++ L +
Sbjct: 156 INQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSND 215
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG--FGYRPPPTI 363
L+ A ++ ++M +GF +++ L+ K D +K++ E++ G+ +
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 364 YVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y L++ Y + A+ ++E + + R + Y V+E+ +++GK D A+ F
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 422 MEKAGFLP-----TPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
++K P T+ ++ + A G+ + AM+++ M + P ++ L+ L
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDLALRWLRFMGSSGIRTNN 535
+ +L+ A K+ EM+ D +LM KEG +D + + M S +R N
Sbjct: 396 CDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNL 455
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ +L + +K+G + AK + V S K+D Y I+ L
Sbjct: 456 AVYNRLQDQLIKAGKLDDAKSFFDMMV-SKLKMDDEAYKFIMRAL 499
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESM--EKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
D Y L+ + K + +A E YE E + + + Y ++ L+++G+ D A K
Sbjct: 272 DGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALK 331
Query: 313 LFQEMKGRGFRP-----GLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSL 367
LF +K P L F +V+ G+ + AM+V +M F P + +L
Sbjct: 332 LFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 368 IESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
+ + L A +L+ EM+ +P+ Y L++++ K GK+D + + M ++
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNL 451
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
P + Y L + +G++D A ++ M + L+ Y ++ L+ +D K
Sbjct: 452 RPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV-SKLKMDDEAYKFIMRALSEAGRLDEMLK 510
Query: 488 ILLEMKAMGYSVDVTASDVLMVYIKE 513
I+ EM V S+ L ++KE
Sbjct: 511 IVDEMLD---DDTVRVSEELQEFVKE 533
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Query: 185 CYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVAC---NRVIQYLAKAEKLEVSF 241
Y + + L+ + FD LFD V N L V N ++ K E +
Sbjct: 312 AYNYVLEALSENGKFDEALKLFD-AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 242 CCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNL 301
F+++ D C DT ++N+L+ + L +A ++Y ME+ + D TY L++
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
K G++D ++ M RP L ++ L D + KAG+LD A K +M +
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KSFFDMMVSKLKMDD 489
Query: 362 TIYVSLIESYVKSGKLETALRLWDEM 387
Y ++ + ++G+L+ L++ DEM
Sbjct: 490 EAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 13/283 (4%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEM---VGDSANSGVSLLVACNRVIQYLAKAEKLEVSFC 242
Y L G ++ D DGV L+ E+ +G + GV V + Y K + E C
Sbjct: 239 YSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGV---VYGQLMKGYFMKEMEKEAMEC 295
Query: 243 CFKKI-QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS-----CLLDSSTYEL 296
+ + +++ ++ YN ++ G +A +++++++K ++ T+ +
Sbjct: 296 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 355
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
M+ G+ + A ++F++M P F +L++ + L A K++ EM
Sbjct: 356 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 415
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
+P Y L+++ K GK++ + M + RPN A+Y + + K+GKLD A
Sbjct: 416 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
S F DM + Y ++ + +G++D +K+ + M +
Sbjct: 476 SFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKA-FEIYESM- 282
N ++Q K +K+E ++ KK+++ G + DT TYN++ T ++ KG +A E+ E M
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
K + T +++ + GR+ + + MK L +F SL++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D +V M+ + Y +++ ++ +G +E A +++ EM AG +P+ Y+++
Sbjct: 312 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ + ++ + A + P + ++ ++G +D AM+++N M G+
Sbjct: 372 AKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 430
Query: 463 RPGLSTYTVLL 473
P + T+ L+
Sbjct: 431 SPNIKTFETLM 441
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 15/306 (4%)
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+E +SC S +LM L + GR A +F+ + G RP L + +L+ +M +
Sbjct: 37 VEGSSCRTVRSRTKLM-NVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
S + E+ G + + ++I ++ +SG +E A++ +MK G P + Y
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFL---PTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+I+ + +GK + + M + G + P T+ L++ +++ A ++ M
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE---MKAMGYSVDVTASDVLMVYIKEGS 515
G+RP TY + T K A ++E MK T V+ Y +EG
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Query: 516 VDLALRWLRFMGSSGIRTN----NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLI 571
V LR++R M + N N +I E + G+ E + E V K D+I
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNV----KADVI 331
Query: 572 LYTSIL 577
Y++++
Sbjct: 332 TYSTVM 337
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 154/366 (42%), Gaps = 12/366 (3%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKA 234
++ + PS Y L + + + + + E+ SG L + N VI +++
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV----EQSGTKLDSIFFNAVINAFSES 128
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCL---LDS 291
+E + K+++ G T TYN+LI + G P ++ E+ + M + + +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGL---NIFASLVDSMGKAGRLDSAMKV 348
T+ +++ K +++ A+++ ++M+ G RP N A+ G+ R +S +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
M M+ +P ++ Y + G++ LR MK N ++ +I +
Sbjct: 249 KMVMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
D + M++ TY+ ++ +++G ++ A +++ M AG++P
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGS 528
Y++L K A ++L + V + V+ + GS+D A+R M
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 427
Query: 529 SGIRTN 534
G+ N
Sbjct: 428 FGVSPN 433
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 149/343 (43%), Gaps = 11/343 (3%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
FK + + G + +Y +L+ + I +E++ LDS + +I ++
Sbjct: 68 FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSE 127
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA---MKVHMEMRGFGYRPP 360
SG ++ A + +MK G P + + +L+ G AG+ + + + + +E P
Sbjct: 128 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ L++++ K K+E A + +M+ G RP+ Y + + + G+ A S
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 421 DM----EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
+ EKA P T ++ + G++ ++ M + L + L+
Sbjct: 248 EKMVMKEKAK--PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
D ++L MK DV T S V+ + G ++ A + + M +G++ +
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 536 FIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILA 578
L + +++ + A+ LLET + ++ +++++T++++
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVIS 407
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
+NSLI F+ E+ M++ + D TY ++ + +G ++ A ++F+EM
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
G +P + ++ L +A A ++ +E RP I+ ++I + +G ++
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSMD 416
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A+R++++M G PN + ++ + + + A M G P ST+ L
Sbjct: 417 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLA 476
Query: 439 EMHAASGQIDHAMKLYNSM 457
E +G D + K N++
Sbjct: 477 EAWRVAGLTDESNKAINAL 495
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
+++ K D TY++++ + + G KA ++++ M K D+ Y ++ ++
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
A +L + + RP + IF +++ G +D AM+V +M FG P + +
Sbjct: 381 PKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
L+ Y++ + A + M+ G +P + + L+ E+ +G D + A + ++
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 203 QLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSL 262
++ F +V D N + VA ++ A+ L C AG +D N++
Sbjct: 292 EVFFQMLVND--NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTI 349
Query: 263 ITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF 322
I+ + G AF + + L D +Y +I + R + +F+LF EM+ G
Sbjct: 350 ISFYAKYGSLCDAFRQFSEIG----LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 323 RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR 382
RP + ++ + L H GY +I +L++ Y K GKL+ A R
Sbjct: 406 RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKR 465
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
++D M ++ + + ++ G A+S F+ M++ G P T +L +
Sbjct: 466 VFDTM----HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 443 ASGQIDHAMKLYNSMTNAGLR--PGLSTYTVLLTLLANKKLVDVAAKILLEM 492
SG +D +L+NSM+ P + Y + LLA +D A + +M
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 8/216 (3%)
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
K +LD + +I AK G L AF+ F E+ G + ++ + SL+ R +
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI---GLKDVIS-YNSLITGCVVNCRPE 391
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+ ++ EMR G RP T + ++ + L + GY N ++ ++
Sbjct: 392 ESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALM 451
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ + K GKLD+A F M K + ++ +L G A+ L+NSM G+
Sbjct: 452 DMYTKCGKLDVAKRVFDTMHKRDIV----SWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
P T +L+ ++ LVD ++ M ++V
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
++LMI A + + A L+ +M G RP + ++ + +D +H +
Sbjct: 71 WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVN 130
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
+ + +L++ Y K G+LE A++++DEM + + + +I + L
Sbjct: 131 CSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP----KRDMVAWNAMISGFSLHCCLT 186
Query: 414 IAMSAFSDMEKA-GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVL 472
+ F DM + G P ST + +G + ++ T G L T +
Sbjct: 187 DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGI 246
Query: 473 LTLLANKKLVDVAAKIL 489
L + A K + A ++
Sbjct: 247 LDVYAKSKCIIYARRVF 263
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
NSLIT++ AF +++ +E S ST+ +I A + R + L +EM
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSL----STWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHME-MRGFGYRPPPTIYVSLIESYVKSGKLE 378
GF P AS++ + G L + H +R Y+ ++ SL++ Y KSG++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A R++D M+ + + YT +I+ + + GK ++A++ F DM+++G P T +L
Sbjct: 477 AAKRVFDSMR----KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 439 EMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
+ S + L+ M + G+R L Y+ ++ L +D A I
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
NSLIT++ AF +++ +E S ST+ +I A + R + L +EM
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSL----STWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHME-MRGFGYRPPPTIYVSLIESYVKSGKLE 378
GF P AS++ + G L + H +R Y+ ++ SL++ Y KSG++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A R++D M+ + + YT +I+ + + GK ++A++ F DM+++G P T +L
Sbjct: 477 AAKRVFDSMR----KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 439 EMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
+ S + L+ M + G+R L Y+ ++ L +D A I
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 163 GDAGLSLFRWAKRQSWYSPSDDCY--VMLFDGL----NRSRDFDGVQLLFDEMVGDSANS 216
G AG+ F A++ P+ DC V+ F+ L S+ FD V+ LF+E+ G S
Sbjct: 120 GKAGM--FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL--S 175
Query: 217 GVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
+V+ N +I+ L + + L + +I++ G K D T+N+L+ KG
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
EI+ M + + +D TY + LA + LF E+K G +P + F +++
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGS 295
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDE 386
G++D A + E+ GYRP + L+ + K+G E+A+ L+ E
Sbjct: 296 INEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 4/307 (1%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
+ Y+ + L + RL ++ +E K A ++ GKAG ++A KV E
Sbjct: 75 AVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEE 134
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTLVIESHAKS 409
M + + +L+ +Y S K + L++E+ K++ +P+ Y +I++ +
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS-IKPDIVSYNTLIKALCEK 193
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
L A++ ++E G P T+ LL GQ + +++ M + + TY
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTY 253
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGS 528
L LAN+ + E+KA G DV + + ++ I EG +D A W + +
Sbjct: 254 NARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVK 313
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
G R + L + K+G +ESA L + + V ++ LV+ + +
Sbjct: 314 HGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREE 373
Query: 589 ERHLMSI 595
++ I
Sbjct: 374 AEEIVKI 380
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 9/234 (3%)
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM--- 282
R+I KA E + F+++ + CK ++N+L++ + K F++ E +
Sbjct: 114 RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYR----LSKKFDVVEELFNE 169
Query: 283 --EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
K S D +Y +I L + L A L E++ +G +P + F +L+ S G
Sbjct: 170 LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKG 229
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
+ + ++ +M Y + + K + + L+ E+K +G +P+ +
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+I GK+D A + + ++ K G+ P +T+A LL +G + A++L+
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 277 EIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM 336
EI E +K + +I K+G + A K+F+EM R + + F +L+ +
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 337 GKAGRLDSAMKVHMEMRG-FGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
+ + D ++ E+ G +P Y +LI++ + L A+ L DE++ G +P+
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 396 FALY-TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLY 454
+ TL++ S+ K G+ ++ ++ M + TY L A + + L+
Sbjct: 215 IVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF 273
Query: 455 NSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKE 513
+ +GL+P + ++ ++ N+ +D A E+ GY D T + +L K
Sbjct: 274 GELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKA 333
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLE 559
G + A+ + S ++QL + +K E A+ +++
Sbjct: 334 GDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 180/419 (42%), Gaps = 42/419 (10%)
Query: 148 PNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSD-DCYVMLFDGLNRSRDFDGVQLLF 206
PN+ +V +L VN D G +L + Q +D Y +L + D Q ++
Sbjct: 300 PNI-YVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIY 358
Query: 207 DEMVGDSANSGVSLLVA---CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLI 263
E +SG+ L A C +I+ A A+ + + ++ G +T T++SLI
Sbjct: 359 KE-AKRMESSGLLKLDAFTYCT-IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLI 416
Query: 264 TLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR 323
+ N GL +A ++E M + C +S + +++ ++ + D AF+LFQ KG
Sbjct: 417 SACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVN 476
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
L D + GR S + G SL+ S ++ + R
Sbjct: 477 ESL-----YADDIVSKGRTSSPNILKNNGPG-----------SLVNRNSNSPYIQASKRF 520
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKS---GKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
++P A Y +++++ GK +M+ G P T++ L++M
Sbjct: 521 C-------FKPTTATYNILLKACGTDYYRGK-----ELMDEMKSLGLSPNQITWSTLIDM 568
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
SG ++ A+++ +M +AG RP + YT + + A K + +A + EM+ +
Sbjct: 569 CGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPN 628
Query: 501 -VTASDVLMVYIKEGS---VDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
VT + +L K GS V L + M ++G + N+ +++L E + + E+ +
Sbjct: 629 WVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQ 687
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 10/252 (3%)
Query: 286 SCLLDSSTYEL--MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
+CLL + L +I K G + + ++ K P + I +++D G G
Sbjct: 225 ACLLPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYV 284
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+ ++ ++ +P + SL+ V S L L+++ M+I + Y +++
Sbjct: 285 KSRYIYEDLLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILL 342
Query: 404 ESHAKSGKLDIAMSAFSD---MEKAGFLPTPS-TYACLLEMHAASGQIDHAMKLYNSMTN 459
++ +G++D+A + + ME +G L + TY ++++ A + A+K+ + M +
Sbjct: 343 KTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKS 402
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVDL 518
G+ P T++ L++ AN LV+ A + EM A G + ++L+ ++ D
Sbjct: 403 VGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDR 462
Query: 519 ALRWLR-FMGSS 529
A R + + GSS
Sbjct: 463 AFRLFQSWKGSS 474
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 127/349 (36%), Gaps = 83/349 (23%)
Query: 121 VAKIVEVVKRWKWGPELDTQLDKLQFVPNMTHVTQALKVVNDGDAGL-----SLFRWAKR 175
+ K+ K WKW ++ + + PN TH +L + +AGL LF
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPN-THTWSSL-ISACANAGLVEQANHLFE-EML 436
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSA--------------------- 214
S P+ C+ +L + +D LF G S
Sbjct: 437 ASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNIL 496
Query: 215 -NSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPY 273
N+G LV N Y+ +++ CFK T TYN L+ G Y
Sbjct: 497 KNNGPGSLVNRNSNSPYIQASKRF-----CFKPT--------TATYNILLKAC---GTDY 540
Query: 274 KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
Y E L EMK G P +++L+
Sbjct: 541 -----YRGKE-----------------------------LMDEMKSLGLSPNQITWSTLI 566
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
D G +G ++ A+++ M G RP Y + I+ ++ L+ A L++EM+ +
Sbjct: 567 DMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIK 626
Query: 394 PNFALYTLVIESHAKSGKL---DIAMSAFSDMEKAGFLPTPSTYACLLE 439
PN+ Y ++++ +K G L ++ + DM AG+ P L+E
Sbjct: 627 PNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIE 675
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 135/355 (38%), Gaps = 91/355 (25%)
Query: 276 FEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS 335
++Y++M+ D ++Y +++ +GR+D A +++E K
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAK----------------- 362
Query: 336 MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPN 395
ME G + Y ++I+ + + + AL++ D+MK G PN
Sbjct: 363 -------------RMESSGL-LKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPN 408
Query: 396 FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
++ +I + A +G ++ A F +M +G P + LL + Q D A +L+
Sbjct: 409 THTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQ 468
Query: 456 S--------------------------MTNAG---------------------LRPGLST 468
S + N G +P +T
Sbjct: 469 SWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTAT 528
Query: 469 YTVLLTLLAN-----KKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRW 522
Y +LL K+L+D EMK++G S + +T S ++ + G V+ A+R
Sbjct: 529 YNILLKACGTDYYRGKELMD-------EMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSIL 577
LR M S+G R + + C ++ + A L E K + + Y ++L
Sbjct: 582 LRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 158/402 (39%), Gaps = 70/402 (17%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA---CNRVIQ----YLAKAEKLEVSF 241
+ GL R D +L+FDEM + + +++ NRV + EK EVS+
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 242 CCF-------KKIQDAGCKIDTE------TYNSLITLFLNKGLPYKAFEIYESMEKTSCL 288
+I+DA + N++I F G KA +++ ME
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR--- 294
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
D++T+ MI + G A LF +M+ +G RP S++ L +V
Sbjct: 295 -DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKL------------------------------- 377
H + + + L+ YVK G+L
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME-KAGFLPTPSTYAC 436
E AL+++ EM +G PN ++ + + +GKL+ + F ME K PT Y+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK---LVDVAAKILLEMK 493
++M +GQ+D AM+L SMT ++P + + LL L +VAAK L E +
Sbjct: 474 TVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE 530
Query: 494 AMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNN 535
V S + K G V + + +RTNN
Sbjct: 531 PDNAGTYVLLSSINASRSKWGDVAVVRK--------NMRTNN 564
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 266 FLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG 325
++ G KA ++Y+ M + ++ MI L + GR+D A +F EM+ R
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTN----MIGGLCREGRVDEARLIFDEMRER----N 202
Query: 326 LNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT--IYVSLIESYVKSGKLETALRL 383
+ + +++ + R+D A K+ F P T + S++ Y SG++E A
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKL------FEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
++ M + +P A +++ + G++ A F ME +T+ +++ +
Sbjct: 257 FEVMPM---KPVIACNAMIV-GFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYER 308
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
G A+ L+ M G+RP + +L++ A + ++ + + DV
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 504 SDVLM-VYIKEGS-VDLALRWLRFMGSSGIRTNNFI 537
+ VLM +Y+K G V L + RF I N+ I
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
C +I AK L CC +++ D K D +N++IT + +G A E+++SM
Sbjct: 119 CCTTLITAYAKLGAL----CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGR 341
+ + +++ +I +++G A K+F M K + +P S++ + G
Sbjct: 175 PRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGE 230
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
L+ ++ R G+ + + IE Y K G ++ A RL++E+ G + N +
Sbjct: 231 LEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL---GNQRNLCSWNS 287
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA- 460
+I S A GK D A++ F+ M + G P T+ LL G + +L+ SM
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH 347
Query: 461 GLRPGLSTYTVLLTLLA 477
+ P L Y ++ LL
Sbjct: 348 KISPKLEHYGCMIDLLG 364
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 9/235 (3%)
Query: 259 YNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
+N +I ++ G A +++ M + S + ++ MI + +G A ++F+EMK
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVV----SWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
RP S++ ++ + G L+ +H+ G R + +LI+ Y K G +E
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A+ +++ + R N ++ +I A G+ A+ F M +AG P+ Y LL
Sbjct: 327 KAIHVFERLP----RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 439 EMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
+ G ++ + ++ M + GL P + Y ++ LL L+D A + +L M
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 117/276 (42%), Gaps = 17/276 (6%)
Query: 200 DGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
D V++ + GD + V+L+ V+ +++ LE+ +D+G +ID
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLV----SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
++LI ++ G+ KA ++E + + + + T+ MI A G+ A F +M+
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVI----TWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF-GYRPPPTIYVSLIESYVKSGKLE 378
G RP + +L+ + G ++ + +M G P Y +++ +SG L+
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS-TYACL 437
A M I +P+ ++ ++ + G +++ + + +P S Y L
Sbjct: 429 EAEEFILNMPI---KPDDVIWKALLGACRMQGNVEMGKRVANIL--MDMVPHDSGAYVAL 483
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLR--PGLSTYTV 471
M+A+ G ++ M +R PG S +
Sbjct: 484 SNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 134/285 (47%), Gaps = 17/285 (5%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
++ AK +L+ +F F++ D K +N LI + + A ++ SM +
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER- 225
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI--FASLVDSMGKAGRLDS 344
+S ++ +I SG L+ A +LF+ M P N+ + +L++ + G ++
Sbjct: 226 ---NSGSWSTLIKGYVDSGELNRAKQLFELM------PEKNVVSWTTLINGFSQTGDYET 276
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
A+ + EM G +P +++ + KSG L + +R+ + G + + A+ T +++
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD 336
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
+AK G+LD A + FS+M L ++ +++ A G+ A++ + M +G +P
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDIL----SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP 392
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMV 509
+ +LT N VD+ M+ + Y+++ T ++V
Sbjct: 393 DEVVFLAVLTACLNSSEVDLGLNFFDSMR-LDYAIEPTLKHYVLV 436
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 144/326 (44%), Gaps = 15/326 (4%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N +I+ L + + E S F + G K D T+ ++ G + ++ + K
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
DS ++ AK+G+L AF++F+E R + + I+ L++ +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR------ 208
Query: 345 AMKVHMEMRGFGYRPPPT--IYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
A +HM F P + +LI+ YV SG+L A +L++ M N +T +
Sbjct: 209 AKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTL 264
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
I +++G + A+S + +M + G P T A +L + SG + ++++ + + G+
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRW 522
+ + T L+ + A +D AA + M + ++ + ++ + G A++
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVF---SNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKS 548
R M SG + + + + +C+ S
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNS 407
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 10/249 (4%)
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
+G +DT +L+T + G A ++++ M + S + + ++ ++G D
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIV----AWNSLVSGFEQNGLADE 191
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
A ++F +M+ GF P F SL+ + + G + VH + G + +LI
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME-KAGFL 428
Y + G + A ++D+MK N A +T +I ++ G A+ F+ ME G +
Sbjct: 252 LYSRCGDVGKAREVFDKMK----ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307
Query: 429 PTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAK 487
P T+ +L A +G ++ +Y MT + L PG+ + ++ +L +D A K
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 488 ILLEMKAMG 496
+ ++ A G
Sbjct: 368 FIHQLDATG 376
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 314 FQEMKGRGFRPGLNIFASLVDSMG--KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
++ M P F S++ S A R+ + H + GFG + +L+ Y
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL--DTYVQAALVTFY 152
Query: 372 VKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K G +E A +++D M + + ++ ++G D A+ F M ++GF P
Sbjct: 153 SKCGDMEGARQVFDRMP----EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDS 208
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+T+ LL A +G + ++ + + GL + T L+ L + V A ++ +
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 492 MKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFM-GSSGIRTNNFIIRQLFESCMKSG 549
MK +V A + ++ Y G A+ M G NN + +C +G
Sbjct: 269 MK----ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 550 LYESAKPLLETYVNS 564
L E + + + S
Sbjct: 325 LVEEGRSVYKRMTKS 339
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 165/413 (39%), Gaps = 32/413 (7%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSAN----SGVSLLVACNRVIQYLAKAEKLEVSFCCF 244
+ G R+ + ++FD MV +S + + VS+L C + + LE+
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL-------KDLEMGRNVH 241
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
K +++ E N+L+ ++L G +A +++ ME+ D T+ MI +
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTED 297
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP--- 361
G ++ A +L + M+ G RP ASLV G A +++ +H G+ R
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH----GWAVRQQVYSD 353
Query: 362 -TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
I SLI Y K +++ R++ + + ++ +I ++ + A+ F
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFS----GASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M + P +T LL +AA + AM ++ +T G L T L+ + +
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 481 LVDVAAKILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
++ A KI ++ S DV L+ Y G AL+ M SG+ N
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 540 QLFESCMKSGLYESA----KPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
+C SGL E + +LE Y A +L R E N
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 35/305 (11%)
Query: 148 PNMTHVTQALKVVNDG---DAGLSLFRWAKRQSWYSPS--DDCYVMLFDGLNRSRDFDGV 202
PN + + V D + G L WA RQ YS + + ++ R V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR------V 370
Query: 203 QLLFDEMVGDSA-NSG--VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETY 259
L F G S ++G +++ C + E + + FK+++ + + T
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGC-------VQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCL--LDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
NSL+ + +A I+ + KT + LD++T ++ +K G L++A K+F +
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLESAHKIFNGI 481
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ + + ++ +L+ G G +A++V MEM G P + S + + SG +
Sbjct: 482 QEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLV 541
Query: 378 ETALRLWDEMKIAGY----RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPST 433
E L L+ M + Y R N YT +++ ++G+LD A++ + F PT +
Sbjct: 542 EEGLTLFRFM-LEHYKTLARSNH--YTCIVDLLGRAGRLD---EAYNLITTIPFEPTSTV 595
Query: 434 YACLL 438
+ LL
Sbjct: 596 WGALL 600
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 81/197 (41%), Gaps = 1/197 (0%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ +I ++ + A LF+ M+ P + SL+ + L AM +H +
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
G+ L+ Y K G LE+A ++++ ++ + L+ +I + G
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST-YTVL 472
A+ F +M ++G P T+ L + SG ++ + L+ M S YT +
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 473 LTLLANKKLVDVAAKIL 489
+ LL +D A ++
Sbjct: 568 VDLLGRAGRLDEAYNLI 584
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 220 LLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIY 279
L+ AC R Y+ E +K+I++ +I N LI L + A EIY
Sbjct: 352 LIWACTREEHYIVGKE-------LYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIY 404
Query: 280 ESMEKTSCLLDSSTYELMIPNL-------AKSGRLDAAFKLFQEMKGRGFRPGLNIFASL 332
E + ++ +YEL++ + +K G +L +M+ +G +P + ++
Sbjct: 405 EDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAV 464
Query: 333 VDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY 392
+ + KA +A+++ M G +P Y +L+ + K + A R+W+ M G
Sbjct: 465 LVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGI 524
Query: 393 RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
PN YT + K ++ + +M G P+ T+ ++ A +G A +
Sbjct: 525 EPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYE 584
Query: 453 LYNSMTNAGLRPGLSTYTVLLTLLAN 478
++ M + + P TY +L+ LAN
Sbjct: 585 WFHRMKSENVEPNEITYEMLIEALAN 610
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 149/354 (42%), Gaps = 57/354 (16%)
Query: 179 YSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+ P+ + +F +S D + +M+ + +SL CN VI + AK L+
Sbjct: 230 FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL---CNAVIGFYAKCGSLD 286
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
+ F ++ + D+ TY ++I+ ++ GL +A ++ ME ST+ MI
Sbjct: 287 YARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMI 338
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
L ++ + F+EM G RP +SL+ S+ + L ++H F R
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH----AFAIR 394
Query: 359 --PPPTIYV--SLIESYVKSGKL-------------------------------ETALRL 383
IYV S+I++Y K G L ++A L
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTPSTYACLLEMHA 442
+D+M+ G +P+ T V+ + A SG D+A F M K P YAC++ + +
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLS 514
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL---TLLANKKLVDVAAKILLEMK 493
+G++ AM+ + M + P + LL ++L + ++ A L EM+
Sbjct: 515 RAGKLSDAMEFISKMP---IDPIAKVWGALLNGASVLGDLEIARFACDRLFEME 565
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 248 QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRL 307
++ GC + +YN L+ + +GL +A +++E M+ + D Y MI L + +
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332
Query: 308 DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSL 367
A +LF++M +G + LV+ KAG +DS + V+ EM+ G+ +L
Sbjct: 333 VKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Query: 368 IESYV--KSGK--LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+E + G+ +E A + D ++ A + P+ Y L+++ + GK+D A++ ++M
Sbjct: 393 VEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Query: 424 KAGFLPTPSTYACLLEMHAASGQ 446
GF P+ TY ++ + G
Sbjct: 453 GKGFKPSQETYRAFIDGYGIVGD 475
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 14/221 (6%)
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
++L+I + S +D A + ++++ RG ++ +L+ + + + K++ E+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 354 GFG-------------YRPPPTIYVSLIESYVKSGKLETALRLWDEMKI-AGYRPNFALY 399
G +P T + S++ S+ + G+ E R+W EM+ G PN Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+++E++ G + A + +M+ G + Y ++ ++ ++ A +L+ M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 460 AGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 500
G+ TY L+ VD + EMK G+ D
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 135/357 (37%), Gaps = 47/357 (13%)
Query: 146 FVPNM-THVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSR------- 197
F P+ + +T L+ N+ L F + +R S S L L+RSR
Sbjct: 69 FTPSQFSEITLCLR--NNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASE 126
Query: 198 -------------DFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCF 244
D D V +F ++ G + V + +I+ +++++ +
Sbjct: 127 IIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVF-DLLIKSCLDSKEIDGAVMVM 185
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K++ G T N+LIT + +++Y +
Sbjct: 186 RKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV---------------------F 224
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG-FGYRPPPTI 363
G D + ++M G+ +P F S++ S + G + ++ EM G P
Sbjct: 225 GLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y L+E+Y G + A ++W+EMK+ G + Y +I + ++ A F DM
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
G T TY L+ + +G +D + +Y M G T L+ L + +
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 50/224 (22%)
Query: 206 FDEMVGDSANS---GVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSL 262
+E VG S N V + C R + +++AEK+ +++++ G D YN++
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGL--MSEAEKV------WEEMKVRGVVYDIVAYNTM 322
Query: 263 ITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGF 322
I + KA E++ M TYE ++ K+G +D+ +++EMK +GF
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Query: 323 R---------------------------------------PGLNIFASLVDSMGKAGRLD 343
P N + LV + + G++D
Sbjct: 383 EADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMD 442
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM 387
A+ + EM G G++P Y + I+ Y G ET+ L EM
Sbjct: 443 RALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 146/316 (46%), Gaps = 22/316 (6%)
Query: 180 SPSDDCYVM--LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKL 237
SP D + + G ++R + + LFD+M + V+ N ++ + E++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE-------VSWNAMLAGYVQGERM 328
Query: 238 EVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELM 297
E++ K++ D + T+N++IT + G +A +++ M K D ++ M
Sbjct: 329 EMA----KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAM 380
Query: 298 IPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY 357
I ++SG A +LF +M+ G R + F+S + + L+ ++H + GY
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 358 RPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMS 417
+ +L+ Y K G +E A L+ EM AG + + +I +++ G ++A+
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEM--AG--KDIVSWNTMIAGYSRHGFGEVALR 496
Query: 418 AFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT-NAGLRPGLSTYTVLLTLL 476
F M++ G P +T +L + +G +D + + +MT + G+ P Y ++ LL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 477 ANKKLVDVAAKILLEM 492
L++ A ++ M
Sbjct: 557 GRAGLLEDAHNLMKNM 572
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 160/376 (42%), Gaps = 66/376 (17%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V+ N ++ + K+E + FK ++ ++N L+ F+ K +A + ++S
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDS 244
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFA--SLVDSMGKA 339
M + D ++ +I A+SG++D A +LF E P ++F ++V +
Sbjct: 245 MN----VRDVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGYIQN 294
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVS---LIESYVKSGKLETALRLWDEMKIAGYRPNF 396
++ A ++ +M P VS ++ YV+ ++E A L+D M N
Sbjct: 295 RMVEEARELFDKM-------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNV 343
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
+ + +I +A+ GK+ A + F M K P ++A ++ ++ SG A++L+
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGS 515
M G R S+++ L+ A+ +++ ++ + GY + +L++Y K GS
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 516 VD-------------------------------LALRWLRFMGSSGIRTNNFIIRQLFES 544
++ +ALR+ M G++ ++ + + +
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 545 CMKSGLYESAKPLLET 560
C +GL + + T
Sbjct: 520 CSHTGLVDKGRQYFYT 535
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
++N++++ ++ G+ +A +++SM + D ++ M+ A+ G L A ++E
Sbjct: 115 SWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
+ G + FA L+ + K+ +L + H ++ G+ + S+I++Y K G++
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
E+A R +DEM + + ++T +I +AK G ++ A F +M + P ++ L
Sbjct: 231 ESAKRCFDEMTV----KDIHIWTTLISGYAKLGDMEAAEKLFCEMPE----KNPVSWTAL 282
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
+ + G + A+ L+ M G++P T++ L A+ A + + GY
Sbjct: 283 IAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASAS------IASLRHGKEIHGY 336
Query: 498 SVD-------VTASDVLMVYIKEGSVDLALRWLRF 525
+ + S ++ +Y K GS++ + R R
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 150/361 (41%), Gaps = 26/361 (7%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D ++N+++ + G ++A Y+ ++ + ++ ++ KS +L +
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
++ GF + + S++D+ K G+++SA + EM I+ +LI Y K
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM----TVKDIHIWTTLISGYAKL 258
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G +E A +L+ EM N +T +I + + G + A+ F M G P T+
Sbjct: 259 GDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+ L A+ + H +++ M +RP + L+ + + ++ + ++ +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF---RI 371
Query: 495 MGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYES 553
D + ++ + + G ALR L M ++ N + + +C SGL E
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 554 AKPLLETYV----------NSAAKVDLILYTSILAHLVRCQEE---KNERHLM-SILGAT 599
E+ + A +DL+ L+R EE + ++H+ +ILG
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Query: 600 K 600
+
Sbjct: 492 R 492
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 10/222 (4%)
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
A L A + + +G R ++ ASL+ G L +H ++ G++ P
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 362 TIYVS-LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
T+ + LI Y+K GK A +++D+M + N + ++ + KSG L A F
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARVVFD 137
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
M + + ++ ++ +A G + A+ Y +G++ ++ LLT +
Sbjct: 138 SMPERDVV----SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 481 LVDVAAKILLEMKAMGYSVDVTAS-DVLMVYIKEGSVDLALR 521
+ + + ++ G+ +V S ++ Y K G ++ A R
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 24/279 (8%)
Query: 260 NSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMK 318
N+L+ ++ +G+ A +++E M EK D ++ ++ +G D A KLF M+
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEK-----DVISWTALVTGNTHNGSYDEALKLFCNMR 422
Query: 319 GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLE 378
G P + AS++ + + L+ +VH G+ ++ SL+ Y K G LE
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA-GFLPTPSTYACL 437
A +++ M+I + +T +I +AK+G L+ A F M G P P YAC+
Sbjct: 483 DANVIFNSMEI----RDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACM 538
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV-----AAKILLEM 492
+++ SG +L + M + P + + +L A++K ++ AAK L+E+
Sbjct: 539 IDLFGRSGDFVKVEQLLHQME---VEPDATVWKAILA--ASRKHGNIENGERAAKTLMEL 593
Query: 493 KAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGI 531
+ V S+ +Y G D A R M S I
Sbjct: 594 EPNNAVPYVQLSN---MYSAAGRQDEAANVRRLMKSRNI 629
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 142/340 (41%), Gaps = 23/340 (6%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G +D N L+ ++ +A ++E+ME ++ T+ M+ +++G A
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK---NNVTWTSMLTGYSQNGFAFKA 211
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+ F++++ G + F S++ + ++VH + G++ + +LI+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM 271
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y K ++E+A L + M++ + + +I + G + A+S F M +
Sbjct: 272 YAKCREMESARALLEGMEV----DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY----TVLLTLLANKKLVDVAA 486
T +L A S MK+ +S ++ G +TY L+ + A + ++D A
Sbjct: 328 DFTIPSILNCFALSRT---EMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 487 KI---LLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFE 543
K+ ++E + ++ VT + GS D AL+ M GI + + +
Sbjct: 385 KVFEGMIEKDVISWTALVTGN------THNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 544 SCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRC 583
+ + L E + + Y+ S L + S++ +C
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC 478
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 143/316 (45%), Gaps = 18/316 (5%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
N ++ L+K+ +++ + F K+ + D T+N++I + N + E + +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNS----RRLSDAEKLFR 83
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
++ + ++ ++ +I KSG AF LF EM+ G +P S++ L
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
++H G+ + L+ Y + ++ A L++ M+ G + N +T ++
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME--GEKNNVT-WTSMLT 200
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
++++G A+ F D+ + G T+ +L A+ ++++ + +G +
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD--VTASDVLMVYIKEGSVDLALRW 522
+ + L+ + A + ++ +A+ LLE G VD V+ + +++ +++G + AL
Sbjct: 261 NIYVQSALIDMYAKCREME-SARALLE----GMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 523 LRFMGSSGIRTNNFII 538
M ++ ++F I
Sbjct: 316 FGRMHERDMKIDDFTI 331
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 170/414 (41%), Gaps = 89/414 (21%)
Query: 149 NMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVM--LFDGLNRSRDFDGVQLLF 206
+T V +A V+ D D G S+ ++ R+ + D +V L D ++ D D +F
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGF--DLADVFVCNSLIDMYSKGFDVDSAFRVF 285
Query: 207 DEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL- 265
DE + +V+ N ++ ++ + + F + ++D T SL+ +
Sbjct: 286 DETTCRN-------IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 266 -FLNKGLPYKAFEI------YESME---------KTSC--------LLDSSTYE------ 295
F + LP K+ YES E TSC +LDS TY+
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 296 LMIPNLAKSGRLDAAFKLFQEMK----------------------------GRGFRPGL- 326
MI LA +GR D A +F M+ G R L
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Query: 327 ----NIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--YVSLIESYVKSGKLETA 380
++ S+VD+ K G + M R F I + +I +Y +G + A
Sbjct: 459 INDISVGTSIVDAYAKCG------AIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
L L+DEMK GY PN Y + + G + + F M + P+ Y+C+++M
Sbjct: 513 LALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDM 572
Query: 441 HAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN--KKLV---DVAAKIL 489
+ +G+ID A++L ++ ++ G S + +L+ N KKL+ +V A++L
Sbjct: 573 LSRAGEIDTAVELIKNLPE-DVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 32/337 (9%)
Query: 147 VPNMTHVTQALKVVNDGDAG-----LSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDG 201
+P+ HV + + + G L LF+ K + C+ + DGL R+++ +
Sbjct: 184 MPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV-----CWTAMIDGLVRNKEMNK 238
Query: 202 VQLLFDEMVGD--SAN--SGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTE 257
LF EM + SAN + V +L AC + LE+ +++ ++
Sbjct: 239 ALELFREMQMENVSANEFTAVCVLSAC-------SDLGALELGRWVHSFVENQRMELSNF 291
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
N+LI ++ G +A ++ M D +Y MI LA G A F++M
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLAMHGASVEAINEFRDM 347
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTIYVSLIESYVKSGK 376
RGFRP +L+++ G LD ++V M R F P Y +++ + G+
Sbjct: 348 VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGR 407
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
LE A R + + I P+ + ++ + G +++ + ++ P TY
Sbjct: 408 LEEAYRFIENIPI---EPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN-PDSGTYVL 463
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGL--RPGLSTYTV 471
L ++A+SG+ + ++ SM ++G+ PG ST V
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 161/397 (40%), Gaps = 37/397 (9%)
Query: 180 SPSDDCYVMLFDG-LNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+P+ Y + DG ++ R DGV L + M+ +S ++ N VI + KA L+
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSL-YHRMIHNS-------VLPDNYVITSVLKACDLK 140
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMI 298
V ++ G ++ ++ G A ++++ M D +MI
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR----DHVAATVMI 196
Query: 299 PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYR 358
++ G + A +LFQ++K + + +++D + + ++ A+++ EM+
Sbjct: 197 NCYSECGFIKEALELFQDVKIKD----TVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY--TLVIESHAKSGKLDIAM 416
V ++ + G LE L W + R + + +I +++ G ++ A
Sbjct: 253 ANEFTAVCVLSACSDLGALE--LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F M + + +T L MH AS + A+ + M N G RP T LL
Sbjct: 311 RVFRVMRDKDVI-SYNTMISGLAMHGASVE---AINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
++ L+D+ ++ MK + ++V+ + G V RF+ + I ++
Sbjct: 367 SHGGLLDIGLEVFNSMKRV-FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHI 425
Query: 537 IIRQLFESCMKSG-----------LYESAKPLLETYV 562
++ L +C G L+ES P TYV
Sbjct: 426 MLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV 462
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 7/245 (2%)
Query: 256 TETYNSLITLFLNKGLPYKAFEIYESM-EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
TET + LI K +A E+++ + E+T TY ++ L KSG+ + A KLF
Sbjct: 92 TETLSDLIA----KKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGY-RPPPTIYVSLIESYVK 373
EM G P + ++ +L+ + ++ +D A + +M+ F +P Y +L+++ V
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 374 SGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM-EKAGFLPTPS 432
+ + + L+ EM PN +V+ + + G+ D SDM P
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
T +L + G+ID Y N G+ P T+ +L+ K++ D + ++ M
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 493 KAMGY 497
+ + +
Sbjct: 328 RKLEF 332
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 142/355 (40%), Gaps = 6/355 (1%)
Query: 166 GLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACN 225
L +F + Q++Y P + Y+ L L +S + Q LFDEM+ + V L A
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA-- 164
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQD-AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
++ ++ ++ +F K++ C+ D TY++L+ ++ +Y+ M++
Sbjct: 165 -LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM-KGRGFRPGLNIFASLVDSMGKAGRLD 343
++ T +++ + GR D K+ +M +P + ++ G G++D
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
+ + R FG P + LI SY K + + + M+ + + Y +I
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNII 343
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
E+ A G F M G T+ CL+ +A +G + +
Sbjct: 344 EAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 403
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVD 517
+ Y +++ A + ++ + MK D ++++ Y KEG D
Sbjct: 404 ENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMND 458
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 109/235 (46%), Gaps = 10/235 (4%)
Query: 310 AFKLFQEMKGRGF-RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A ++F ++ + F +P + L+ +GK+G+ + A K+ EM G P +Y +L+
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 369 ESYVKSGKLETALRLWDEMK-IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
+Y +S ++ A + D+MK +P+ Y+ ++++ + + D+ S + +M++
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P T +L + G+ D K+ + M + +P + T ++L++ N +D+
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 487 KILLEMKAMGYSVDVTASDVLM-------VYIKEGSVDLALRWLRFMGSSGIRTN 534
+ + G + ++L+ +Y K SV +R L F ++ N
Sbjct: 287 SWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNN 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 9/293 (3%)
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
Y+P Y+ L+ KSG+ A +L+DEM G P LYT ++ ++ +S +D A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 417 SAFSDMEK-AGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTL 475
S M+ P TY+ LL+ + Q D LY M + P T ++L+
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 476 LANKKLVDVAAKILLEM-KAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRT 533
D K+L +M + DV T + +L V+ G +D+ W + GI
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 534 NNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLM 593
L S K +Y+ ++E Y +I+ + KN
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 594 SILGATKHKAHS-FMCGLFTGPEHRG--QPVLSFVREFFQGVDYELEEGAAKY 643
+ + KA + C L G + G V+S V+ +E+ E A Y
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQ---LAAKFEIPENTAFY 409
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLV 482
E+ + P TY LL + SGQ + A KL++ M GL P + YT LL L+
Sbjct: 116 EQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLI 175
Query: 483 DVAAKILLEMKAMGY-SVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
D A IL +MK+ DV T S +L + DL + M I N
Sbjct: 176 DDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNI 235
Query: 541 LFESCMKSGLYESAKPLL-ETYVNSAAKVDLILYTSILA 578
+ + G ++ + +L + V++A K D+ IL+
Sbjct: 236 VLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 41/362 (11%)
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
+S+LV I LAK+ ++ + +++ D ++DT +N+++T + GL +A
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASA----RQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIA 56
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
++ + + D ++ ++ A G + K+ + GF L + SL+D G
Sbjct: 57 LFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYG 116
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
K SA KV +M R T + SL+ +Y+ + + E AL ++ EM R FA
Sbjct: 117 KCSDTLSANKVFRDM-CCDSRNEVT-WCSLLFAYMNAEQFEAALDVFVEMP---KRVAFA 171
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS------GQIDHAM 451
+ ++I HA GKL+ +S F +M ++ F P T++ L+ +A G++ HA+
Sbjct: 172 -WNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 452 KLYNSMTNA--GLRPGLSTYTVL---------------LTLLANKKLVDVAAKILLEMKA 494
L N ++A LS YT L LT ++ ++D KI KA
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 495 MGY------SVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKS 548
+ VT + ++ Y + G + ALR+ M SG+ +++F + +C S
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC--S 348
Query: 549 GL 550
GL
Sbjct: 349 GL 350
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 139/357 (38%), Gaps = 56/357 (15%)
Query: 245 KKIQDAGCKIDTE-TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
K +D C E T+ SL+ ++N A +++ M K + +MI A
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAF----AWNIMISGHAH 181
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSM-GKAGRLDSAMKVHMEMRGFGYRPPPT 362
G+L++ LF+EM F+P F+SL+++ + + VH M G+
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 363 IYVSLIESYVKSGKLETALR-----------LWDE-----MKIA-----------GYRPN 395
S++ Y K G + A+R W+ MKI N
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 396 FALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQ--IDHAMKL 453
+T +I + ++G + A+ F +M K+G Y +L HA SG + H +
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL--HACSGLALLGHGKMI 359
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLA--------NKKLVDVAAKILLEMKAMGYSVDVTASD 505
+ + + G + L+ L A ++ D+A K L+ M ++ V
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV---- 415
Query: 506 VLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYV 562
G D AL+ M +SGI+ +N L +C SGL E + E+ V
Sbjct: 416 -------HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMV 465
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%)
Query: 272 PYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS 331
P A E M T L T + NL + + D K ++ + +G+ L ++
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 332 LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG 391
++ + KAGR+ + EM+ G P ++Y +LIE+ K+ + A +LWDEM + G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 392 YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
+ N Y ++I ++ G+ + ++ F M + G P + Y L+E +I+ AM
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 452 KLY 454
+++
Sbjct: 523 EVF 525
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 195/501 (38%), Gaps = 53/501 (10%)
Query: 133 WGPELDTQLDKLQF----VPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVM 188
W P ++ L L F P++ ++N L F WA +Q YS Y
Sbjct: 28 WSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHS 87
Query: 189 LFDGLNRSRDFDGVQLLFDE--------------------MVGDSANSGVSLLV------ 222
+F L+ SR F + LF + ++G A S +L
Sbjct: 88 IFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTG 147
Query: 223 ------ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAF 276
CNR++ L + + F K++ G ++T + I F +
Sbjct: 148 QEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLL 207
Query: 277 EIYESMEKTSCLLDSSTYELMI-PNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDS 335
+ + ++K + ++ S L+I +L K R AF + +E++ +P + + ++
Sbjct: 208 RLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEA 267
Query: 336 MGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRP- 394
G L V + R G P + Y + I + + +L A + E+ ++G P
Sbjct: 268 FVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPM 326
Query: 395 -NFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
N L L+ + D A+ M G LP T + L + + DH +K
Sbjct: 327 DNDILDALI--GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA 384
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIK 512
Y +++ G L +Y+++++ L V + L EMK G + DV+ + L+ K
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 513 EGSVDLALRWLRFMGSSGIRTN----NFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
+ A + M G + N N +IR+L E G E + L + + +
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE----EGEAEESLRLFDKMLERGIEP 500
Query: 569 DLILYTSILAHLVRCQEEKNE 589
D +Y S++ L C+E K E
Sbjct: 501 DETIYMSLIEGL--CKETKIE 519
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 4/331 (1%)
Query: 195 RSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKI 254
RS + + + L DE+ AN ++ + ++ L K + +F +++++ CK
Sbjct: 199 RSSETNQLLRLVDEV--KKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKP 256
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D Y + F+ G Y+ + + K SS Y I +L + RL A ++
Sbjct: 257 DFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVA 316
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+ + F +I +L+ S+ A DSA++ + M G P L ++ +
Sbjct: 317 EVIVSGKFPMDNDILDALIGSVS-AVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRH 375
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
K + ++ ++ + GY Y+L+I K+G++ + +A +M+K G P S Y
Sbjct: 376 DKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLY 435
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
L+E + I A KL++ M G + L+TY VL+ L+ + + + ++ +M
Sbjct: 436 NALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLE 495
Query: 495 MGYSVDVTASDVLMVYI-KEGSVDLALRWLR 524
G D T L+ + KE ++ A+ R
Sbjct: 496 RGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 73/394 (18%)
Query: 244 FKKIQDAGCKIDTETYNSLIT-------LFLNKGLPY---------------KAFEIYES 281
F+KIQ+ G +ID+ + S+I+ + L K L ++Y
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 282 MEKTS------CLLDSS--TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLV 333
M + C D++ T+ MI + + + A LF M F+P +L+
Sbjct: 481 MGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 334 DSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR 393
+ G L+ +H + + ++ +LI+ Y K G LE + L+D AG +
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD----AGNQ 596
Query: 394 PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
+ + ++I + G ++ A++ F ME++ PT T+ LL +G ++ KL
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 454 YNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE 513
+ M ++P L Y+ L+ LL+ ++ A ++ M +S D
Sbjct: 657 FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP---FSPD------------- 700
Query: 514 GSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD--LI 571
I L SCM G +E + E V S + D I
Sbjct: 701 ---------------------GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 572 LYTSILAHLVRCQEEKNERHLMSILGATKHKAHS 605
+ ++ + + +E + R +M G K HS
Sbjct: 740 MLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 137 LDTQLDKL--QFVPNMTH--VTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDG 192
L+TQ + P T+ V AL+ +D D L +FRW +Q Y + + Y +
Sbjct: 58 LETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQ 117
Query: 193 LNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGC 252
+ + V+ L +E++ + V L N +I+ FCC +K
Sbjct: 118 AITGKRNNFVETLIEEVIAGACEMSVPLY---NCIIR-----------FCCGRKF----- 158
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS-CLLDSSTYELMIPNLAKSGR----- 306
L +AF++Y M ++ D TY L++ +L K
Sbjct: 159 ------------------LFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVC 200
Query: 307 ---LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
L A L ++MK G P + ++ + K +D A++V EM +G P
Sbjct: 201 YVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYT 260
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y L++ + G++ L + EM++ G PN + Y ++I S + +LD A+ DM
Sbjct: 261 YSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML 320
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKL 453
P TY +L G+ A+++
Sbjct: 321 ANSLSPDMLTYNTVLTELCRGGRGSEALEM 350
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 377 LETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYAC 436
L L +MK G P+ + ++I+++AK ++D A+ F +M G P TY+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 437 LLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMG 496
L++ G++ + Y M G+ P S Y VL+ L+ ++ +D A +++ +M A
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 497 YSVDVTASDVLMVYIKEG-----SVDLALRWLR---FMGSSGIRT 533
S D+ + ++ + G ++++ W + MG RT
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRT 368
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 14/253 (5%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
++ K+ KLE + F+ ++D T S+I+ ++N+G A EI+ T+
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCT----SMISGYMNQGFVEDAEEIF----NTT 232
Query: 287 CLLDSSTYELMIPNLAKSGRL-DAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+ D Y M+ ++SG + ++ M+ GF P ++ FAS++ + +
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+VH ++ G + SL++ Y K G + A R++D+M+ N +T +I+
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ----EKNVFSWTSMIDG 348
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT-NAGLRP 464
+ K+G + A+ F+ M++ P T+ L + SG +D +++ SM + ++P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 465 GLSTYTVLLTLLA 477
+ Y ++ L+
Sbjct: 409 KMEHYACIVDLMG 421
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 141/349 (40%), Gaps = 44/349 (12%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
I G + D L+ L L G A ++++ + K + S Y MI K G
Sbjct: 60 IIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL----SAYNYMISGYLKHGL 115
Query: 307 LDAAFKLFQEM-----KGRGFRPGLNIFASLVDSMGKAGRLDSAM--KVHMEMRGFGYRP 359
+ L Q M K G+ + + AS +S G L ++ VH +
Sbjct: 116 VKELLLLVQRMSYSGEKADGYTLSMVLKAS--NSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 360 PPTIYVSLIESYVKSGKLETALRLWDEMK----------IAGYR---------------- 393
+ +L+++YVKSGKLE+A +++ MK I+GY
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 394 -PNFALYTLVIESHAKSGKL-DIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAM 451
+ +Y ++E ++SG+ ++ + M++AGF P ST+A ++ + +
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 452 KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYI 511
+++ + +G+ + + LL + A ++ A ++ +M+ + + ++ Y
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV---FSWTSMIDGYG 350
Query: 512 KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLET 560
K G+ + AL M I N +C SGL + + E+
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 42/315 (13%)
Query: 246 KIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSG 305
K+ D D +Y +LI + ++G A ++++ + + D ++ MI A++G
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETG 245
Query: 306 RLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYV 365
A +LF++M RP + ++V + ++G ++ +VH+ + G+ I
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305
Query: 366 SLIESYVKSGKLET-------------------------------ALRLWDEMKIAGYRP 394
+LI+ Y K G+LET AL L+ EM +G P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 395 NFALYTLVIESHAKSGKLDIA--MSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
N ++ + A G +DI + + D G S L++M+A G I+ A +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 453 LYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV-DVTASDVLMVYI 511
++NS+ L LS++ ++ A D + + M+ +G D+T +L
Sbjct: 426 VFNSI----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 512 KEGSVDLALRWLRFM 526
G +DL R M
Sbjct: 482 HSGMLDLGRHIFRTM 496
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 269 KGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI 328
+GLPY A +++++++ + L+ + M A S +A KL+ M G P
Sbjct: 82 EGLPY-AISVFKTIQEPNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 329 FASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
F ++ S K+ ++H + G ++ SLI YV++G+LE A +++D+
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK-- 194
Query: 389 IAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID 448
+ +R + YT +I+ +A G ++ A F ++ + ++ ++ +A +G
Sbjct: 195 -SPHR-DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYK 248
Query: 449 HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM 508
A++L+ M +RP ST +++ A +++ ++ L + G+ ++ + L+
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 509 -VYIKEGSVDLA 519
+Y K G ++ A
Sbjct: 309 DLYSKCGELETA 320
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 19/272 (6%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L CN ++ L +CCF +D D+ ++N+++T L P + +++
Sbjct: 406 LTVCNSLLTMYTFCSDL---YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLN----IFASLVDSM 336
M + C D T + NL + ++ KL ++ + GL I L+D
Sbjct: 463 LMLVSECEPDHIT----MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
K G L A ++ M + +LI Y +SG E AL L+ EMK AG PN
Sbjct: 519 AKCGSLGQARRIFDSMDN----RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDME-KAGFLPTPSTYACLLEMHAASGQIDHAMKLYN 455
+ V+ + + G ++ + ++ M+ + G PT +C++++ A +G+++ A + +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 456 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
M L P + + LL+ + V +A K
Sbjct: 635 EMK---LEPDVVVWKTLLSACKTQGNVHLAQK 663
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N LI ++ G +A I++SM+ D ++ +I A+SG + A LF+EMK
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRG-FGYRPPPTIYVSLIESYVKSGKLE 378
G P F ++ + G ++ +K++ M+ G P +++ ++G+L
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 379 TALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
A R DEMK+ P+ ++ ++ + G + +A A ++ K P ST LL
Sbjct: 628 EAERFIDEMKL---EPDVVVWKTLLSACKTQGNVHLAQKAAENILKID--PFNSTAHVLL 682
Query: 439 -EMHAASGQIDHAMKLYNSMTNAGLR--PGLS 467
MHA+SG ++A L +SM ++ PG S
Sbjct: 683 CSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 122/312 (39%), Gaps = 20/312 (6%)
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
AGC SL ++ G A +++ +E+ D++++ ++I LA +G D
Sbjct: 307 AGC--------SLCDMYARCGFLNSARRVFDQIERP----DTASWNVIIAGLANNGYADE 354
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
A +F +M+ GF P SL+ + K L M++H + +G+ T+ SL+
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP 429
Y L L+++ + ++ H + ++ + F M + P
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM---LRLFKLMLVSECEP 471
Query: 430 TPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
T LL + +++ GL P L+ + A + A +I
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 490 LEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKS 548
M + DV + L+V Y + G + AL + M S+GI N+ + +C
Sbjct: 532 DSMD----NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV 587
Query: 549 GLYESAKPLLET 560
GL E L T
Sbjct: 588 GLVEEGLKLYAT 599
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 13/269 (4%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
D +NS+I F GL +A +++ M + + ++ MI ++GR A +F
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMF 246
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
+EM+ + +P SL+++ G + +H + + + +LI+ Y K
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G +E L +++ + + + +I A +G + AM FS++E++G P ++
Sbjct: 307 GCIEEGLNVFE----CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMK 493
+L A SG++ A + + M + P + YT+++ +L L++ A ++ K
Sbjct: 363 IGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI---K 419
Query: 494 AMGYSVD-VTASDVLMVYIKEGSVDLALR 521
M D V S +L K G+V++A R
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAKR 448
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 253 KIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
K+D YN L+ L++ GL A ++++ M + + + T+ +I L+K R+ F
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV----TWNSLISVLSKKVRVHEMFN 323
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
LF++M+ +++ + + L + ++H ++ +P + SL++ Y
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K G++E + R++D M + A + +++ +A +G ++ ++ F M ++G P
Sbjct: 384 KCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 433 TYACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
T+ LL + +G ++ + L+ M T + P L Y L+ +L + A K++
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 492 M 492
M
Sbjct: 500 M 500
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K+ D + + T+NSLI++ K ++ F ++ M++ +T ++P ++
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIY 364
L ++ ++ +P + + SL+D GK G ++ + +V M +
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM----LTKDLASW 406
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEK 424
++ Y +G +E + L++ M +G P+ + ++ + +G + +S F M K
Sbjct: 407 NIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-K 465
Query: 425 AGFLPTPST--YACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT---LLANK 479
F +P+ YACL+++ +G+I A+K+ +M +P S + LL L N
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMP---FKPSASIWGSLLNSCRLHGNV 522
Query: 480 KLVDVAAKILLEMK 493
+ ++AAK L ++
Sbjct: 523 SVGEIAAKELFVLE 536
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 199 FDGVQLLFDEMVGDSANSGVSLLVACNRV----------IQYLAKAEKLEVSFC------ 242
F+ + + +EM+G S + ++L AC+RV Q L EK +V
Sbjct: 322 FNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDM 381
Query: 243 ---C-----FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
C +++ D D ++N ++ + G + ++E M ++ D T+
Sbjct: 382 YGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITF 441
Query: 295 ELMIPNLAKSGRLDAAFKLFQEMKGRGFR--PGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
++ + +G + LF+ MK FR P L +A LVD +G+AG++ A+KV +
Sbjct: 442 VALLSGCSDTGLTEYGLSLFERMKTE-FRVSPALEHYACLVDILGRAGKIKEAVKV---I 497
Query: 353 RGFGYRPPPTIYVSLIES 370
++P +I+ SL+ S
Sbjct: 498 ETMPFKPSASIWGSLLNS 515
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 149/337 (44%), Gaps = 22/337 (6%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKA-FEIYESM- 282
N ++Q K +K+E ++ KK+++ G + DT TYN++ T ++ KG +A E+ E M
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
K + T +++ + GR+ + + MK L +F SL++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
D +V + + + +S E G + +++ MK + + Y+ V
Sbjct: 312 DGIDEVTLTL----------LLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTV 361
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
+ + + +G ++ A F +M KAG P Y+ L + + + + A +L ++
Sbjct: 362 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES- 420
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRW 522
RP + +T +++ + +D A ++ +M G S ++ + LM G +++ W
Sbjct: 421 RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW----GYLEVKQPW 476
Query: 523 -----LRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
L+ M G++ N L E+ +GL + +
Sbjct: 477 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 11/287 (3%)
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+E +SC S +LM L + GR A +F+ + G RP L + +L+ +M +
Sbjct: 37 VEGSSCRTVRSRTKLM-NVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
S + E+ G + + ++I ++ +SG +E A++ +MK G P + Y
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFL---PTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+I+ + +GK + + M + G + P T+ L++ +++ A ++ M
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE---MKAMGYSVDVTASDVLMVYIKEGS 515
G+RP TY + T K A ++E MK T V+ Y +EG
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Query: 516 VDLALRWLRFMGSSGIRTN----NFIIRQLFESCMKSGLYESAKPLL 558
V LR++R M + N N +I E + G+ E LL
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL 322
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 162/368 (44%), Gaps = 36/368 (9%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
FK + + G + +Y +L+ + I +E++ LDS + +I ++
Sbjct: 68 FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSE 127
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA---MKVHMEMRGFGYRPP 360
SG ++ A + +MK G P + + +L+ G AG+ + + + + +E P
Sbjct: 128 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ L++++ K K+E A + +M+ G RP+ Y + + + G+ A S
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV 247
Query: 421 D----MEKAGFLPTPSTYACLLEMHAASGQIDHAMK---------------LYNSMTNAG 461
+ EKA P T ++ + G++ ++ ++NS+ N
Sbjct: 248 EKMVMKEKAK--PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 462 L----RPGLSTYTVLLTLLANKKLVDVAA------KILLEMKAMGYSVDV-TASDVLMVY 510
+ R G+ T+ L L++ + V++ ++L MK DV T S V+ +
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 511 IKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDL 570
G ++ A + + M +G++ + L + +++ + A+ LLET + ++ ++
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNV 424
Query: 571 ILYTSILA 578
+++T++++
Sbjct: 425 VIFTTVIS 432
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 156/391 (39%), Gaps = 37/391 (9%)
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKA 234
++ + PS Y L + + + + + E+ SG L + N VI +++
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV----EQSGTKLDSIFFNAVINAFSES 128
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCL---LDS 291
+E + K+++ G T TYN+LI + G P ++ E+ + M + + +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGL---NIFASLVDSMGKAGRLDSAMKV 348
T+ +++ K +++ A+++ ++M+ G RP N A+ G+ R +S +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
M M+ +P ++ Y + G++ LR MK N ++ +I +
Sbjct: 249 KMVMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 409 -------------------------SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAA 443
G + + + M++ TY+ ++ ++
Sbjct: 308 VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSS 367
Query: 444 SGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA 503
+G ++ A +++ M AG++P Y++L K A ++L + V
Sbjct: 368 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIF 427
Query: 504 SDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
+ V+ + GS+D A+R M G+ N
Sbjct: 428 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
++N + L N+ + + + M++ + D TY ++ + +G ++ A ++F+EM
Sbjct: 325 SFNEEVELVGNQKMKVQVLTL---MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKL 377
G +P + ++ L +A A ++ +E RP I+ ++I + +G +
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSM 440
Query: 378 ETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
+ A+R++++M G PN + ++ + + + A M G P ST+ L
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 500
Query: 438 LEMHAASGQIDHAMKLYNSM 457
E +G D + K N++
Sbjct: 501 AEAWRVAGLTDESNKAINAL 520
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 106/235 (45%), Gaps = 14/235 (5%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L +G D DG+ DE+ + LL++ N ++ L +K++V K
Sbjct: 301 LINGFVEVMDRDGI----DEV------TLTLLLMSFNEEVE-LVGNQKMKVQVLTLMK-- 347
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
+ K D TY++++ + + G KA ++++ M K D+ Y ++ ++
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Query: 309 AAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
A +L + + RP + IF +++ G +D AM+V +M FG P + +L+
Sbjct: 408 KAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Query: 369 ESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y++ + A + M+ G +P + + L+ E+ +G D + A + ++
Sbjct: 467 WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 13/271 (4%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A N +I A +++ F +I + D ++NS+I ++ G A ++ M
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ + + ++ MI ++ A +LF EM+ P A+ + + + G L
Sbjct: 208 AEKNAI----SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
+ +H + R + LI+ Y K G++E AL ++ +K + + +T +
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK----KKSVQAWTAL 319
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT-NAG 461
I +A G A+S F +M+K G P T+ +L + +G ++ ++ SM +
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
L+P + Y ++ LL L+D A + + EM
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 152/369 (41%), Gaps = 24/369 (6%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGV----SLLVACNRVIQYLAKAEK 236
P + ++ G + S + + LL+ M+ SA SLL AC+ + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF------ 131
Query: 237 LEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYEL 296
E + +I G + D NSLI + G A +++ + + D ++
Sbjct: 132 -EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNS 186
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
+I K+G++D A LF++M + + +++ +A A+++ EM+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAIS----WTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAM 416
P + + + + G LE + + R + L ++I+ +AK G+++ A+
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 417 SAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLL 476
F +++K + + L+ +A G A+ + M G++P + T+T +LT
Sbjct: 303 EVFKNIKK----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 477 ANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNF 536
+ LV+ I M+ Y++ T + G L RF+ ++ N
Sbjct: 359 SYTGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 537 IIRQLFESC 545
I L ++C
Sbjct: 418 IWGALLKAC 426
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 129/281 (45%), Gaps = 12/281 (4%)
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
++ C+ + ++ MI ++ + A LF EMK +G RP ++ ++ ++ +
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----V 409
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLV 402
S +VH ++ Y T+ +L+++YVK GK+E A +++ + + ++ +
Sbjct: 410 ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID----DKDIVAWSAM 465
Query: 403 IESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAAS-GQIDHAMKLYNSMTNAG 461
+ +A++G+ + A+ F ++ K G P T++ +L + AA+ + + + +
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 462 LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALR 521
L L + LLT+ A K ++ A ++ + V+ + ++ Y + G AL
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL---VSWNSMISGYAQHGQAMKALD 582
Query: 522 WLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYV 562
+ M ++ + +F +C +GL E + + V
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 117/540 (21%), Positives = 202/540 (37%), Gaps = 76/540 (14%)
Query: 45 RFTSS-WRIPGLSNDTNFMRCYCNNGSGSKEFTEEIEYLDESGSVIYKGKGVRSVEPGLD 103
RFT++ WR P L N R Y N + + + + S S +Y + PG D
Sbjct: 2 RFTTTIWRPPSLENFKPKFRIYANGVAQVRIYC----FGTVSSSRLYNAHNLFDKSPGRD 57
Query: 104 DHVMVG------------DVKKPFMNA------------LAVAKIVEVVKRWKWGPELDT 139
+ + K+ F+N +V K+ + +G +L
Sbjct: 58 RESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHC 117
Query: 140 QLDKLQFVPNMTHVTQALKVVNDGDA---GLSLFRWAKRQSWYSPSDDCYVMLFDGLNRS 196
Q K F+ +++ T + G G +F K ++ + + L G R+
Sbjct: 118 QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT-----WTTLISGYARN 172
Query: 197 RDFDGVQLLFDEMVGDSAN-SGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKID 255
D V LF M + + + A + + L+V K D +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 256 TETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQ 315
NSLI L+L G KA +++ E S + T+ MI A +G A +F
Sbjct: 233 ----NSLINLYLKCGNVRKARILFDKTEVKSVV----TWNSMISGYAANGLDLEALGMFY 284
Query: 316 EMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG 375
M+ R + FAS++ L ++H + +G+ I +L+ +Y K
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 376 KLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
+ ALRL+ E+ G N +T +I ++ + A+ FS+M++ G P TY+
Sbjct: 345 AMLDALRLFKEIGCVG---NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 436 CLL---------EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
+L E+HA + + Y + G T LL V+ AA
Sbjct: 402 VILTALPVISPSEVHAQVVKTN-----YERSSTVG--------TALLDAYVKLGKVEEAA 448
Query: 487 KILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC 545
K+ + D+ A S +L Y + G + A++ + GI+ N F + C
Sbjct: 449 KVFSGID----DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 9/234 (3%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
NS++ ++ G A +++ M D ++ +I ++G + FK F M+
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMR----CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
G +P ASL+ G ++ +VH FG T+ SLI Y K G ++
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A ++ E R + T +I +A+ GK A+ F K GF P T+ +L
Sbjct: 465 ASMIFGETD----RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
Query: 440 MHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
SGQ+D +N M +RP Y ++ LL + A K++ EM
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 254 IDTETYNSLITLFLNKGLPY-KAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
+D E +N ++ + N +A I+ M + +Y MI +K G L + +
Sbjct: 256 VDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLR 315
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
L+ EMK RG PG+ ++ SLV + + D AMK+ ++ G +P Y S+I
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
++GKL+ A + M P + +E+ + + M+ + PT
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTFHAFLEA----VNFEKTLEVLGQMKISDLGPTEE 431
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
T+ +L Q ++A+K++ M + + Y + L + ++ A +I EM
Sbjct: 432 TFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Query: 493 KAMGY 497
K+ G+
Sbjct: 492 KSKGF 496
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEK 284
+ +I +K L S + +++ G E YNSL+ + + +A ++ + + +
Sbjct: 298 SHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNE 357
Query: 285 TSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDS 344
DS TY MI L ++G+LD A + M P ++ F + ++++ +
Sbjct: 358 EGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEK 413
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
++V +M+ P ++ ++ K + E AL++W EM N ALY I+
Sbjct: 414 TLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQ 473
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
G L+ A +S+M+ GF+ P L E + M L + G +
Sbjct: 474 GLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKRMNLQKVGSQEGYK 532
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 21/276 (7%)
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL---FLNKGLPYKAFEIY 279
+C+ +I L +K +++C + + + + +T ++ + + +A +
Sbjct: 157 SCDLMIWVLGNHQKFNIAWCLIRDMFN----VSKDTRKAMFLMMDRYAAANDTSQAIRTF 212
Query: 280 ESMEKTSCLLDSSTYELMIPNLAKSGRLD-------AAFKLFQEMKGRGFRPGLNIFASL 332
+ M+K ++ ++ L + G ++ A+ KLF + GF LN + ++
Sbjct: 213 DIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFP-VDVEGFNVILNGWCNI 271
Query: 333 VDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGY 392
+ +A R + EM + P Y +I + K G L +LRL+DEMK G
Sbjct: 272 WTDVTEAKR------IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 393 RPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMK 452
P +Y ++ + D AM + + G P TY ++ +G++D A
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 453 LYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
+ +M + L P + T+ L + +K ++V ++
Sbjct: 386 VLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQM 421
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 180 SPSDDCYVMLFDGLNRSRD-FDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLE 238
+P+ D Y + ++ + FD ++L +DEM G+ + N ++ L + + +
Sbjct: 291 TPNKDSYSHMISCFSKVGNLFDSLRL-YDEMKKRGLAPGIEVY---NSLVYVLTREDCFD 346
Query: 239 VSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM--EKTSCLLDSSTYEL 296
+ KK+ + G K D+ TYNS+I G A + +M E S +D+ L
Sbjct: 347 EAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFL 406
Query: 297 MIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG 356
N K+ ++ +MK P F ++ + K + ++A+K+ EM F
Sbjct: 407 EAVNFEKT------LEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFE 460
Query: 357 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
P +Y++ I+ + G LE A ++ EMK G+ N L L+ E K
Sbjct: 461 IVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVK 512
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 134/314 (42%), Gaps = 21/314 (6%)
Query: 227 VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTS 286
+I + + +LE ++D+ ++ +++ SLI ++ AF ++ EK
Sbjct: 94 LIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEW--RLAFLAFKWGEKRG 151
Query: 287 CLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
C D + +LMI L + + A+ L ++M +F ++D A A+
Sbjct: 152 CD-DQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFL-MMDRYAAANDTSQAI 209
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESH 406
+ M F + P + L+ + + G +E A +E +A + L+ + +E
Sbjct: 210 RTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKA----EEFMLASKK----LFPVDVEGF 261
Query: 407 AK--SGKLDI------AMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+G +I A + +M P +Y+ ++ + G + +++LY+ M
Sbjct: 262 NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK 321
Query: 459 NAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVD 517
GL PG+ Y L+ +L + D A K++ ++ G D VT + ++ + G +D
Sbjct: 322 KRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLD 381
Query: 518 LALRWLRFMGSSGI 531
+A L M S +
Sbjct: 382 VARNVLATMISENL 395
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
+LF+EM RG + +L+ + +AG D A ++ EM G P Y L++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 372 VKSGKLETALRL------WD---EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM 422
K+GKLE AL WD + + G +PN YT +I K G + A + F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
++ G LP TY L+ H G + +L M + STY ++ +L + +L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F+++ G +T TY +LI G A EI++ M D TY +++ L K
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
+G+L+ A + G+ G ++F SL ++K G +P
Sbjct: 64 NGKLEKAL-----VAGK-VEDGWDLFCSL------------SLK--------GVKPNVVT 97
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
Y ++I + K G E A L+ +MK G P+ Y +I +H + G + +M
Sbjct: 98 YTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHA 450
F STY + +M G++D
Sbjct: 158 SCRFAGDASTYGLVTDM-LHDGRLDKG 183
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 186 YVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFK 245
Y L GL ++ D D Q +F EMV D + + N ++ L K KLE +
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDI---MTYNILLDGLCKNGKLEKALVA-G 74
Query: 246 KIQDA----------GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
K++D G K + TY ++I+ F KG +A+ ++ M++ L DS TY
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSA 345
+I + G A+ +L +EM+ F + + LV M GRLD
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKG 183
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 346 MKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
M++ EM G Y +LI+ ++G + A ++ EM G P+ Y ++++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 406 HAKSGKLDIAMSA---------FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
K+GKL+ A+ A F + G P TY ++ G + A L+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 457 MTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSV 516
M G P TY L+ +A+++ EM++ ++ D + ++ + +G +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 180
Query: 517 D 517
D
Sbjct: 181 D 181
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 381 LRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEM 440
+ L+ EM G N YT +I+ ++G D+A F +M G P TY LL+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 441 HAASGQIDHAM---------KLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLE 491
+G+++ A+ L+ S++ G++P + TYT +++ K + A + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 492 MKAMGYSVDVTASDVLM-VYIKEG----SVDL--ALRWLRFMGSSGIRTNNFIIRQLFES 544
MK G D + L+ ++++G S +L +R RF G + T + L +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA--STYGLVTDMLHDG 178
Query: 545 CMKSGLYE 552
+ G E
Sbjct: 179 RLDKGFLE 186
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 252 CKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAF 311
C ++ +T ++TL L +A + + + D+ Y L+I A G L+ A
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185
Query: 312 KLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESY 371
L +EM G P + + S+++ AG++D A ++ EM Y ++E
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 372 VKSGKLETALRLWDEMKIAG----YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGF 427
KSG +E AL L EM+ PN YTLVI++ + +++ A+ M G
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC 305
Query: 428 LPTPSTYACLL---------EMHAASGQIDHAMKL 453
+P T AC+L ++ A S ID +KL
Sbjct: 306 MPNRVT-ACVLIQGVLENDEDVKALSKLIDKLVKL 339
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 41/335 (12%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
VA N VI+ A L ++ K++ G D TY S+I + N G A+ + +
Sbjct: 166 VAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKE 225
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
M K C+L+S TY ++ + KSG ++ A +L EM+
Sbjct: 226 MSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK---------------------- 263
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
E G P Y +I+++ + ++E AL + D M G PN +
Sbjct: 264 ---------EDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 402 VIESHAKSGKLDIAMSAFSD-MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
+I+ ++ + A+S D + K G + ++ + + A K++ M
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 461 GLRP-GLSTYTVLLTLLANKKLVDVAAKILL----EMKAMGYSVDVTASDVLMVYI-KEG 514
G+RP GL+ V L ++ +D LL E K + ++D VL++ + ++G
Sbjct: 375 GVRPDGLACSHVFRELCLLERYLDC---FLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQG 431
Query: 515 SVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSG 549
+ A + + M +R + ++ E+ K+G
Sbjct: 432 NSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 4/186 (2%)
Query: 337 GKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNF 396
+A D A+ V + F Y +I + G L A L EM G P+
Sbjct: 141 NQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDV 200
Query: 397 ALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNS 456
YT +I + +GK+D A +M K + TY+ +LE SG ++ A++L
Sbjct: 201 ITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAE 260
Query: 457 MTNAG----LRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIK 512
M + P TYT+++ K+ V+ A +L M G + + VL+ +
Sbjct: 261 MEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVL 320
Query: 513 EGSVDL 518
E D+
Sbjct: 321 ENDEDV 326
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L +CN +I K LE + F++++ K+ ++ S+I +L G +AF +++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKV---SWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
+ D T+ +MI L ++ A L +M G +P + ++ L+ S G
Sbjct: 425 KLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 341 RLDSAMKVH--MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL 398
LD +H + Y P + SL+ Y K G +E A ++ +M + +
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVS 536
Query: 399 YTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
+ +I + G D A++ F +M +G P T+ +L + SG I ++L+ +M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 459 NA-GLRPGLSTYTVLLTLLA 477
++PG+ Y ++ LL
Sbjct: 597 ETYSIQPGIDHYISMIDLLG 616
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ S+I+ Y+++G + A L+ ++ + + +T++I ++ A S SDM
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYN--SMTNAGLRPGLSTYTVLLTLLANKKL 481
+ G P STY+ LL A+ +D ++ + T A P L L+++ A
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 482 VDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQL 541
++ A +I +M V+ + ++M G D AL + M SG + N+ +
Sbjct: 519 IEDAYEIFAKMVQKD---TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGV 575
Query: 542 FESCMKSGL----YESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILG 597
+C SGL E K + ETY + + + Y S++ L R + K +S L
Sbjct: 576 LSACSHSGLITRGLELFKAMKETY---SIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Query: 598 AT-KHKAHSFMCGL 610
T H + + GL
Sbjct: 633 FTPDHTVYGALLGL 646
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L+ N ++ AK +E ++ F K+ + DT ++NS+I + GL KA +++
Sbjct: 503 LILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR-GFRPGLNIFASLVDSMGKA 339
M + +S T+ ++ + SG + +LF+ MK +PG++ + S++D +G+A
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRA 618
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLI 368
G+L A + + + P T+Y +L+
Sbjct: 619 GKLKEAEEF---ISALPFTPDHTVYGALL 644
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 11/245 (4%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G + D ++LI +F G P A +++ M D+ + +I A++ R D A
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVA 244
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+LF+ MK GF S++ + L+ M+ H+ + Y + +L++
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDM 302
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y K G LE ALR++++MK + ++ +I A++G A+ F M+ +G P
Sbjct: 303 YCKCGSLEDALRVFNQMK----ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
T +L + +G ++ + SM G+ P Y ++ LL +D A K+L
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 490 LEMKA 494
EM+
Sbjct: 419 NEMEC 423
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 34/304 (11%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N LI +++ L A ++++ M + + + ++ MI +K A +L M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
RP + ++S++ S G D M +H + G + +LI+ + K G+ E
Sbjct: 156 DNVRPNVYTYSSVLRSCN--GMSDVRM-LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
AL ++DEM + G + ++ +I A++ + D+A+ F M++AGF+ +T +L
Sbjct: 213 ALSVFDEM-VTG---DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDV---------AAKILL 490
A +G ++ G++ + L+ N LVD+ A ++
Sbjct: 269 --ACTGL---------ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 491 EMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGL 550
+MK +T S ++ + G AL+ M SSG + N I + +C +GL
Sbjct: 318 QMKERDV---ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 551 YESA 554
E
Sbjct: 375 LEDG 378
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 33/286 (11%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITL--------------- 265
+VA N +I + E+S FK++ +G ++ + T SL+ +
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL 346
Query: 266 ---FLNKGLPYKAFEIYES----MEKTSCLLDSS------TYELMIPNLAKSGRLDAAFK 312
FL+ A S +E L D S ++ MI ++G + A
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
LF+EM+ F P ++ + + G L VH +R + + +LI Y
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
K G + A RL+D M + N + +I + G+ A++ F +M +G PTP
Sbjct: 467 KCGSIAEARRLFDLMT----KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLA 477
T+ C+L + +G + +++NSM + G P + Y ++ +L
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 14/276 (5%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D Y MI +G + + LF+E+ G R + SLV +G L +H
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIH 342
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL--YTLVIESHA 407
+ ++ +L Y K ++E+A +L+DE P +L + +I +
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE------SPEKSLPSWNAMISGYT 396
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLS 467
++G + A+S F +M+K+ F P P T C+L A G + +++ + + +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 468 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMG 527
T L+ + A + A ++ M +VT + ++ Y G AL M
Sbjct: 457 VSTALIGMYAKCGSIAEARRLF---DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 528 SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVN 563
+SGI + +C +GL + + + ++
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 228 IQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
I +K K+++ F++ + K D YN++I + + G + +++ + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMK 347
L SST ++P SG L + + F ++ +L K ++SA K
Sbjct: 319 RLRSSTLVSLVP---VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 348 VHMEMRGFGYRPPPTI--YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIES 405
+ F P ++ + ++I Y ++G E A+ L+ EM+ + + PN T ++ +
Sbjct: 376 L------FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 406 HAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMT 458
A+ G L + + F + L+ M+A G I A +L++ MT
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 4/284 (1%)
Query: 302 AKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP 361
++G + AF++ M G +N+++ LV ++G A+ + +M G P
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 362 TIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSD 421
Y SLI+ +V G ++ A + +++ G P+ L L+I ++ + G+ + A F+
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 422 MEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKL 481
+EK +P T+A +L SG+ D ++ + + G L T +L +
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGY 399
Query: 482 VDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQ 540
A K+L M +++D T + L + G+ A++ + + +
Sbjct: 400 NSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSA 459
Query: 541 LFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQ 584
+ +S ++ G Y +A L + + +D++ YT + LVR +
Sbjct: 460 IIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK 503
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 165/443 (37%), Gaps = 22/443 (4%)
Query: 136 ELDTQLDKLQFVPN------MTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVML 189
E+ T + FVPN M V L VVN L +F + ++++S D +
Sbjct: 129 EVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVN---GALEIFEGIRFRNFFSF--DIALSH 183
Query: 190 FDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQD 249
F D GV+++ M+G+ ++++ + + +F +
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERF---GQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
+G + ++ L++ F G P KA +++ M + C + TY +I G +D
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
AF + +++ G P + + ++ + + GR + A KV + P + S++
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYT--LVIESHAKSGKLDIAMSAFSDMEKAGF 427
S SGK + R+ G +F L T L+ +K G A+ S M F
Sbjct: 361 SLCLSGKFDLVPRI-----THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDF 415
Query: 428 LPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAK 487
TY L G A+K+Y + ++ ++ L + A
Sbjct: 416 ALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVH 475
Query: 488 ILLEMKAMGYSVDVTASDVLMV-YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
+ Y +DV + V + ++ ++ A M GI N R +
Sbjct: 476 LFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Query: 547 KSGLYESAKPLLETYVNSAAKVD 569
K E + +L + ++D
Sbjct: 536 KEKETEKVRKILRECIQEGVELD 558
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 147/384 (38%), Gaps = 38/384 (9%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
++++ +GC+I + L+ +F + KA E+Y M + ++ +M+ K
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 305 GRLDAAFKLFQ----------------------------------EMKGRGFRPGLNIFA 330
++ A ++F+ M G GF P F
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 331 SLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIA 390
++ + G + A +V M G ++ L+ + +SG+ + A+ L+++M
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 391 GYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHA 450
G PN YT +I+ G +D A + S ++ G P ++ + G+ + A
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 451 MKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-V 509
K++ S+ L P T+ +L+ L D+ +I +G D+ ++L
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLSNC 393
Query: 510 YIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVD 569
+ K G AL+ L M + + + + G +A + + + +D
Sbjct: 394 FSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLD 453
Query: 570 LILYTSILAHLVRCQEEKNERHLM 593
+++I+ L+ + HL
Sbjct: 454 AHFHSAIIDSLIELGKYNTAVHLF 477
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 39/335 (11%)
Query: 177 SWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMV--GDSANSGVSLLVACNRVIQYLAKA 234
S S S + + ML G RS + LF++M+ G S N LV +I+
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPN-----LVTYTSLIKGFVDL 295
Query: 235 EKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTY 294
++ +F K+Q G D N +I + G +A +++ S+EK + D T+
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 295 ELMIPNLAKSGRLDA--------------------------------AFKLFQEMKGRGF 322
++ +L SG+ D A K+ M + F
Sbjct: 356 ASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDF 415
Query: 323 RPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALR 382
+ + ++ + G +A+K++ + + ++I+S ++ GK TA+
Sbjct: 416 ALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVH 475
Query: 383 LWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHA 442
L+ + Y + YT+ I+ ++ +++ A S DM++ G P TY ++
Sbjct: 476 LFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Query: 443 ASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLA 477
+ + K+ G+ +T + +LL+
Sbjct: 536 KEKETEKVRKILRECIQEGVELDPNTKFQVYSLLS 570
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 16/295 (5%)
Query: 129 KRWKWGPELDTQLDKLQFVPNMTHVTQALKVVN-DGDAGLSLFRWAKRQSWYSPSDDC-- 185
K+++W E+ + +K PNM+ +++N G G+ F A++ P +C
Sbjct: 85 KKFEWVEEILEEQNKY---PNMSKEGFVARIINLYGRVGM--FENAQKVFDEMPERNCKR 139
Query: 186 ----YVMLFDGLNRSRDFDGVQLLFDEMVGD-SANSGVSLLVACNRVIQYLAKAEKLEVS 240
+ L + S+ FD V+ +F E+ G S V+ + N +I+ L +
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA---SYNTLIKGLCGKGSFTEA 196
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
+I++ G K D T+N L+ KG + +I+ M + + D +Y +
Sbjct: 197 VALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLG 256
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPP 360
LA + + LF ++KG +P + F +++ G+LD A+ + E+ G RP
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPL 316
Query: 361 PTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIA 415
++ SL+ + K+G LE+A L E+ + A+ V+++ K K D A
Sbjct: 317 KFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 130/307 (42%), Gaps = 4/307 (1%)
Query: 292 STYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHME 351
+ YE + LA + + + ++ +E A +++ G+ G ++A KV E
Sbjct: 72 AVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDE 131
Query: 352 MRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEM--KIAGYRPNFALYTLVIESHAKS 409
M + + +L+ + V S K + ++ E+ K++ P+ A Y +I+
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS-IEPDVASYNTLIKGLCGK 190
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G A++ ++E G P T+ LL G+ + +++ M ++ + +Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDV-TASDVLMVYIKEGSVDLALRWLRFMGS 528
L LA + + + ++K DV T + ++ ++ EG +D A+ W + +
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 529 SGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKN 588
+G R F+ L + K+G ESA L + VD + ++ LV+ ++
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
Query: 589 ERHLMSI 595
++ +
Sbjct: 371 AEEIVEL 377
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 262 LITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR- 320
+I L+ G+ A ++++ M + +C + ++ ++ S + D +F+E+ G+
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPP-TIYVSLIESYVKSGKLET 379
P + + +L+ + G A+ + E+ G +P T + L ESY K GK E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK-GKFEE 230
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
++W M + + Y + A K + +S F ++ P T+ +++
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
+ G++D A+ Y + G RP + LL + ++ A ++ E+ A V
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 500 D 500
D
Sbjct: 351 D 351
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 9/247 (3%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
I AG D ++SL+ ++ G +A I++ + + D ++ MI KS R
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DVVSWTSMIDRYFKSSR 299
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
F LF E+ G RP FA ++++ + +VH M G+ P S
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
L++ Y K G +E+A + D +P+ +T +I A++G+ D A+ F + K+G
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCP----KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG-LRPGLSTYTVLLTLLANKKLVDVA 485
P T+ +L +G ++ ++ + S+T L YT L+ LLA +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 486 AKILLEM 492
++ EM
Sbjct: 476 KSVISEM 482
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 41/292 (14%)
Query: 296 LMIPNLAKSGRLDAAF------KLFQE---MKGRGFRPGLNIFASLVDSMGKAGRLDSAM 346
+++ L ++ R A KL +E + GR +P + + +L+ + L+
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGK 105
Query: 347 KVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFAL--YTLVIE 404
KVH +R G+ P I+ L+ Y K G L A +++DEM PN L + +++
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM------PNRDLCSWNVMVN 159
Query: 405 SHAKSGKLDIAMSAFSDM-EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GL 462
+A+ G L+ A F +M EK + ++ ++ + Q + A+ LY+ M
Sbjct: 160 GYAEVGLLEEARKLFDEMTEKDSY-----SWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 463 RPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLA-- 519
RP + T ++ + A K + +I + G D V S ++ +Y K G +D A
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 520 ----------LRWL----RFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPL 557
+ W R+ SS R + +L SC + Y A L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 250 AGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDA 309
+G ID N+LI ++ G + +I+ SM D+ T+ +I + G
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWNTVISACVRFGDFAT 492
Query: 310 AFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIE 369
++ +M+ P + F + ++H + FGY I +LIE
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 370 SYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLP 429
Y K G LE + R+++ M R + +T +I ++ G+ + A+ F+DMEK+G +P
Sbjct: 553 MYSKCGCLENSSRVFERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 430 TPSTYACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
+ ++ + SG +D + + M T+ + P + Y ++ LL+ + + A +
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 489 LLEM 492
+ M
Sbjct: 669 IQAM 672
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 148/367 (40%), Gaps = 14/367 (3%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
L+ + V++ L ++ + + AG +++ N LI ++ G A +++
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
SME D+ ++ +I +SG L A KLF+ M + + L+ +
Sbjct: 367 SMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L +H G ++ +LI+ Y K G++ +L+++ M + +
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVTWN 478
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA 460
VI + + G + + M K+ +P +T+ L M A+ +++ +
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 461 GLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLAL 520
G L L+ + + ++ ++++ M VT + ++ Y G + AL
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV---VTWTGMIYAYGMYGEGEKAL 595
Query: 521 RWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLIL--YTSILA 578
M SGI ++ + + +C SGL + E + + K+D ++ Y ++
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK-MKTHYKIDPMIEHYACVVD 654
Query: 579 HLVRCQE 585
L R Q+
Sbjct: 655 LLSRSQK 661
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 144/358 (40%), Gaps = 13/358 (3%)
Query: 138 DTQLDKLQ----FVPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGL 193
D +L +L+ PN V + V D L ++ ++ Y P++ Y ++ +
Sbjct: 48 DDRLARLRHKDWLAPN--EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKF 105
Query: 194 NRSRDFDGVQLLFDEM-VGDSANSGVSLLVACNRVIQYLAKA--EKLEVSFCCFKKIQDA 250
+++ +D ++ + + + R+ LA +E+ F + D
Sbjct: 106 GQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILF----GMPDF 161
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
GC ++++N ++ L ++ L + +I+ S K +D+ ++I L +SG L+AA
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
+L E + RP + F+ L+ G+ + A K+ M P + LI
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
K G++E + L + MK+ G PN Y V+ + A S M G P+
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKI 488
+Y ++ + + + M N G P + ++ + +K D A +
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANL 399
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 116/285 (40%), Gaps = 11/285 (3%)
Query: 255 DTETYNSLITLFLNKGLPYKAF-EIYESM-----EKTSCLLDSSTYELM--IPNLAKSGR 306
D + SL L +NK K + EI E M EK + Y LM NLA GR
Sbjct: 90 DYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA--GR 147
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVS 366
++ A ++ M G P F +++ + A D K+ + G
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 367 LIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAG 426
LI+ +SG LE AL+L DE RPN ++ +I GK + A MEK
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 427 FLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
P T+ L+ G+++ + L M G P TY +L L +KK A
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 487 KILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRW-LRFMGSSG 530
+++ +M + G + +++ + E + + W LR M + G
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 30/285 (10%)
Query: 251 GCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAA 310
G ++ NS+I++F+ A +ES+ + + + +Y + ++ + A
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQA 458
Query: 311 FKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIES 370
FKL E+ R FASL+ + G + ++H ++ G + +LI
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 371 YVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPT 430
Y K G ++TA R+++ M+ N +T +I AK G + F+ M + G P
Sbjct: 519 YSKCGSIDTASRVFNFME----NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 431 PSTYACLLEMHAASGQIDHAMKLYNSM-TNAGLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
TY +L + G + + +NSM + ++P + Y ++ LL L+ A + +
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 490 LEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTN 534
M + DV L W F+G+ + +N
Sbjct: 635 ---NTMPFQADV------------------LVWRTFLGACRVHSN 658
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 165/435 (37%), Gaps = 72/435 (16%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVS 240
P+D CY + + S DF GV + + + + + V C+ + ++ E +
Sbjct: 164 PNDYCYTAVIRACSNS-DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 241 FCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPN 300
+ F K+ + ++ T+ +IT + G P +A + M + D T +
Sbjct: 223 YKVFDKMSE----LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 301 LAKSGRLDAAFKLFQEMKGRGFRPGL--NIFASLVDSMGKA---GRLDSAMKVHMEMRGF 355
A+ L L +++ R GL ++ SLVD K G +D KV M
Sbjct: 279 CAELENL----SLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 356 GYRPPPTIYVSLIESYVKSGKLET-ALRLWDEMKIAGY-RPNFALYT------------- 400
+ +LI Y+K+ L T A+ L+ EM G+ PN ++
Sbjct: 335 SVMS----WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 401 ----------------------LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
VI KS +++ A AF + + + +Y L
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFL 446
Query: 439 EMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYS 498
+ + + A KL + +T L T+ LL+ +AN + +I ++ +G S
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 499 VDVTASDVLM-VYIKEGSVDLALRWLRFMGS----------SGIRTNNFIIRQLFESCMK 547
+ + L+ +Y K GS+D A R FM + +G + F IR L
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL--ETFN 564
Query: 548 SGLYESAKPLLETYV 562
+ E KP TYV
Sbjct: 565 QMIEEGVKPNEVTYV 579
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/396 (19%), Positives = 164/396 (41%), Gaps = 18/396 (4%)
Query: 120 AVAKIVEVVKRWKWG-PELDTQLDKLQFVPNMTHVTQALKVVNDGDAG---LSLFRWAKR 175
A+ +++ +V G +L+ L+++ P+ VTQ ++ + + L F W+ +
Sbjct: 36 ALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCK 95
Query: 176 QSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAE 235
S D + + L +D +Q+L ++ ++ V + L K
Sbjct: 96 SLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI---VAETLVKVG 152
Query: 236 KLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYE 295
K E + FK + C D T ++I+ ++G +A + + + S Y
Sbjct: 153 KEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYR 212
Query: 296 LMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGK-------AGRLDSAMKV 348
++ + + A ++ Q+MK G P L F SL+ + + +G + A+ +
Sbjct: 213 SLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNI 272
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAK 408
+EMR + +P Y L+ ++ ++ + ++ ++MK +G P+ Y V+
Sbjct: 273 MLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYL 332
Query: 409 SGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLST 468
+G+ +M + GF P Y L+ + +++ A++L+ M + +
Sbjct: 333 TGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQV 392
Query: 469 YTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS 504
Y +L+ L + ++ E S+DVT S
Sbjct: 393 YDLLIPKLCKGGNFEKGRELWEE----ALSIDVTLS 424
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 16/252 (6%)
Query: 254 IDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKL 313
I ET N+LI +++ A ++ +EK D ++ MI L R A L
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDL 292
Query: 314 FQEMK-GRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
F M+ G +P +I S++ + G +D VH + G + I ++++ Y
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 373 KSGKLETALRLWDEMKIAG-YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTP 431
K G +ETAL +++ ++ + N L L I H ++ F +M K GF P
Sbjct: 353 KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE-----SLRYFEEMVKLGFKPNL 407
Query: 432 STYACLLEMHAASGQIDHAMKLYNSMTNA--GLRPGLSTYTVLLTLLANKKLVDVAAKIL 489
T+ L +G +D + ++ M + L P L Y ++ LL L+D A +++
Sbjct: 408 VTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELV 467
Query: 490 LEMKAMGYSVDV 501
KAM DV
Sbjct: 468 ---KAMPVKPDV 476
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 19/237 (8%)
Query: 247 IQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGR 306
I AG K DT +++ ++ G A EI+ + + T+ ++ LA G
Sbjct: 332 ILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF----TWNALLGGLAIHGH 387
Query: 307 LDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI--Y 364
+ + F+EM GF+P L F + +++ G +D + +M+ Y P + Y
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 365 VSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL----DIAMSAFS 420
+I+ ++G L+ AL L M + +P+ + ++ + G L + +F
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPV---KPDVRICGAILSACKNRGTLMELPKEILDSFL 504
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR--PGLSTYTVLLTL 475
D+E Y L + AA+ + D ++ M G+ PG S +TL
Sbjct: 505 DIE----FEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIEKFMTL 557
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 133/332 (40%), Gaps = 17/332 (5%)
Query: 255 DTETYNSLITLFLNKGLPYKAFE--IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFK 312
D N ++T FL K + ++ I S+ +L S +Y ++ + A +
Sbjct: 37 DDLIINKVVT-FLGKSADFASYSSVILHSIRS---VLSSFSYNTLLSSYAVCDKPRVTIF 92
Query: 313 LFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYV 372
++ GF P + F + + GK + ++H + G+ + SL+ Y
Sbjct: 93 AYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYG 152
Query: 373 KSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
G+ A +++ EM + + +T +I ++G A+ FS M+ P +
Sbjct: 153 VCGESRNACKVFGEMPVR----DVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLA 205
Query: 433 TYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
TY C+L G + ++ + L T L+ + + + A ++ E+
Sbjct: 206 TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 493 -KAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLY 551
K S + S ++ + ++DL + SSGI+ + I+ + +C G
Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDL---FSLMQTSSGIKPDGHILTSVLSACASLGAV 322
Query: 552 ESAKPLLETYVNSAAKVDLILYTSILAHLVRC 583
+ + + E + + K D + T+I+ +C
Sbjct: 323 DHGRWVHEYILTAGIKWDTHIGTAIVDMYAKC 354
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 152/409 (37%), Gaps = 47/409 (11%)
Query: 147 VPNMTHVTQALKVVNDGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLN----RSRDFDGV 202
P + + Q L+ + F WA Q YS Y + D L+ +++ F V
Sbjct: 125 TPVVCKILQRLQY--EEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIV 182
Query: 203 QLLFDEMVGDSANSGVSLLVA---------CNRV---IQYLAKAEKLEV----SFCCFKK 246
+ D M N+ +LV C R +Q AK +++ V F
Sbjct: 183 IDMLDYM---KRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNM 239
Query: 247 IQDAGCKI-------------------DTETYNSLITLFLNKGLPYKAFEIYESMEKTSC 287
+ DA CK D T+N L + P KA ++ E M +
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGH 299
Query: 288 LLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFR---PGLNIFASLVDSMGKAGRLDS 344
++ TY I ++G +D A LF M +G P FA ++ ++ K + +
Sbjct: 300 KPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEE 359
Query: 345 AMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIE 404
++ M G P + Y +IE + K++ A + DEM GY P+ Y +
Sbjct: 360 CFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLR 419
Query: 405 SHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRP 464
++ K D A+ + M ++ P+ TY L+ M D A + M
Sbjct: 420 VLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQ 479
Query: 465 GLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKE 513
+ TY ++ L + A +L E+ G + D ++ + E
Sbjct: 480 DVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSE 528
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 181 PSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSL-LVACNRVIQYLAKAEKLEV 239
P Y + +G+ + D DEM +N G +V N ++ L + K +
Sbjct: 374 PDVSTYKDVIEGMCMAEKVDEAYKFLDEM----SNKGYPPDIVTYNCFLRVLCENRKTDE 429
Query: 240 SFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIP 299
+ + ++ ++ C +TYN LI++F P AF + M+K C+ D TY MI
Sbjct: 430 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 300 NLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGF 355
L R A L +E+ +G + +F S + + + G L + KV M+ F
Sbjct: 490 GLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKF 545
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 162 DGDAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLL 221
D A L F K + +P+ + ++ L ++ D + F E++G ++G
Sbjct: 320 DEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN---DKAEECF-ELIGRMISTGCLPD 375
Query: 222 VACNR-VIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
V+ + VI+ + AEK++ ++ ++ + G D TYN + + +A ++Y
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M ++ C TY ++I + D AF + EM R + + ++++ +
Sbjct: 436 RMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH 495
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMK 388
R A + E+ G + P ++ S + + G L+ ++ + MK
Sbjct: 496 RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 359 PPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSA 418
P Y S+I+ + K +++ A R+ D M G P+ ++ +I + K+ ++D M
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 419 FSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLAN 478
F +M + G + TY L+ G +D A L N M + G+ P T+ +L L +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 479 KKLVDVAAKILLEMK 493
KK + A IL +++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 293 TYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM 352
TY MI K R+D A ++ M +G P + F++L++ KA R+D+ M++ EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 353 RGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKL 412
G Y +LI + + G L+ A L +EM G P++ + ++ +L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 413 DIAMSAFSDMEKA 425
A + D++K+
Sbjct: 132 RKAFAILEDLQKS 144
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%)
Query: 324 PGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRL 383
P + S++D K R+D A ++ M G P + +LI Y K+ +++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 384 WDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+ EM G N YT +I + G LD A ++M G P T+ C+L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 256 TETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQ 315
T TYNS+I F + A + +SM C D T+ +I K+ R+D ++F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 316 EMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG 375
EM RG + +L+ + G LD+A + EM G P + ++
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 376 KLETALRLWDEMK 388
+L A + ++++
Sbjct: 130 ELRKAFAILEDLQ 142
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D + +I A++G D A F M+G G+ P +S++ + ++GRLD +VH
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+ G + +LI+ Y K G LE A +++ + + + A +I A
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV----RSVACCNSMISCLAIH 353
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
GK A+ FS ME P T+ +L G + +K+++ M ++P + +
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 413
Query: 470 TVLLTLLANKKLVDVAAKILLEM 492
L+ LL + A +++ EM
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEM 436
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 153/353 (43%), Gaps = 22/353 (6%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLF 314
+ + ++ ++ +++N A + +E + + + + + LM+ + G + A +F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFV----WSLMMSGYFRIGDVHEARAIF 231
Query: 315 QEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKS 374
R F L I+ +L+ + G D A+ M+G GY P S++ + +S
Sbjct: 232 Y----RVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 375 GKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTY 434
G+L+ + + G N + +I+ +AK G L+ A S F + S
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI 347
Query: 435 ACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 494
+CL A G+ A++++++M + L+P T+ +LT + + KI EMK
Sbjct: 348 SCL----AIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKT 403
Query: 495 MGYSVDVTASDVLMVYI-KEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESC---MKSGL 550
+V L+ + + G + A R ++ M ++ N+ ++ L +C M + +
Sbjct: 404 QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEM 460
Query: 551 YESAKPLLET---YVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATK 600
E ++ET NS ++ L +++ AH R Q + R M G K
Sbjct: 461 AEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEK 513
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V + ++ A++ +L+V I G +++ N+LI ++ G A ++ES
Sbjct: 275 VTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGR 341
+ S +S MI LA G+ A ++F M+ +P F +++ + G
Sbjct: 335 ISVRSVACCNS----MISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 342 LDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTL 401
L +K+ EM+ +P + LI +SGKL+ A RL EM + +PN +
Sbjct: 391 LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV---KPNDTVLGA 447
Query: 402 VIESHAKSGKLDIAMSAFSDMEKAGFLP---TPSTYACLLEMHAASGQIDHAMKLYNSMT 458
++ + ++A +E AG + + + A + ++A + + A L M
Sbjct: 448 LLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEME 507
Query: 459 NAGLR--PGLST 468
GL PGLS+
Sbjct: 508 KRGLEKSPGLSS 519
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Query: 225 NRVIQYLAKAEKLEVSFCCFKKI--QDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
N +I AK LE + F+ I + C NS+I+ G +A E++ +M
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVAC------CNSMISCLAIHGKGKEALEMFSTM 366
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
E D T+ ++ G L K+F EMK + +P + F L+ +G++G+L
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAG-----YRPNFA 397
A ++ EM +P T+ +L+ + E A ++ ++ AG Y N
Sbjct: 427 KEAYRLVKEMH---VKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHL 483
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 438
+ +H + + A + +MEK G +P + +L
Sbjct: 484 ASISNLYAHTE--RWQTAEALRVEMEKRGLEKSPGLSSLVL 522
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
++ ++ FL G A ++YE + + +S MI L K GR+D A ++F EM
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS----MIHGLCKEGRVDEAREIFDEM 198
Query: 318 KGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT--IYVSLIESYVKSG 375
R + + ++V G+ R+D A K+ F P T + S++ YV++G
Sbjct: 199 SERS----VITWTTMVTGYGQNNRVDDARKI------FDVMPEKTEVSWTSMLMGYVQNG 248
Query: 376 KLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
++E A L++ M + +P A + I + G++ A F M++ +++
Sbjct: 249 RIEDAEELFEVMPV---KPVIACNAM-ISGLGQKGEIAKARRVFDSMKER----NDASWQ 300
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM 495
++++H +G A+ L+ M G+RP T +L++ A+ + ++ ++
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 496 GYSVDVTASDVLM-VYIKEGS-VDLALRWLRFMGSSGIRTNNFI 537
+ VDV + VLM +YIK G V L + RF I N+ I
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 151/361 (41%), Gaps = 63/361 (17%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVA---CNRVIQ----YLAKAEKLEVSF 241
+ GL + D + +FDEM S + +++ NRV + EK EVS+
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 237
Query: 242 CCF-------KKIQDAGCKIDTE------TYNSLITLFLNKGLPYKAFEIYESMEKTSCL 288
+I+DA + N++I+ KG KA +++SM++
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER--- 294
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
+ ++++ +I ++G A LF M+ +G RP S++ L +V
Sbjct: 295 -NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKL------------------------------- 377
H ++ + + L+ Y+K G+L
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 378 ETALRLWDEMKIAG-YRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKA-GFLPTPSTYA 435
E AL+++ EM ++G +PN + + + + +G ++ + + ME G P + YA
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVA---AKILLEM 492
C+++M +G+ + AM++ +SMT + P + + LL +DVA AK L+E+
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 493 K 493
+
Sbjct: 531 E 531
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 143/330 (43%), Gaps = 31/330 (9%)
Query: 258 TYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEM 317
++N L++ ++ G +A ++++ M + + + ++ ++ +G++D A LF +M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESLFWKM 136
Query: 318 KGRGFRPGLNIFASLVDSMG--KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSG 375
P N + V +G + GR+D A K++ EM T S+I K G
Sbjct: 137 ------PEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIART---SMIHGLCKEG 186
Query: 376 KLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYA 435
+++ A ++DEM + +T ++ + ++ ++D A F M + T ++
Sbjct: 187 RVDEAREIFDEMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWT 238
Query: 436 CLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAM 495
+L + +G+I+ A +L+ M ++P ++ +++ L K + A ++ MK
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMP---VKPVIAC-NAMISGLGQKGEIAKARRVFDSMKER 294
Query: 496 GYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAK 555
D + V+ ++ + G AL M G+R + + C K
Sbjct: 295 N---DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 556 PLLETYVNSAAKVDLILYTSILAHLVRCQE 585
+ V VD+ + + ++ ++C E
Sbjct: 352 QVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 52/340 (15%)
Query: 233 KAEKLEVSFCCFKKIQD--AGCKIDTETY--NSLITLFLNKGLPYKAFEIYESMEKTSCL 288
KA E CC ++ C D+ + ++L+ L+ GL A +++++E
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR--- 225
Query: 289 LDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKV 348
+ ++ +I A+ + A +LFQ M GFRP +ASL + G L+ V
Sbjct: 226 -NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 349 HMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWD----------------------- 385
H M G + +L++ Y KSG + A +++D
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 386 --------EMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACL 437
EM+ G RPN + V+ + + SG LD + M+K G +P Y +
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 438 LEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLT---LLANKKLVDVAAKILLEMKA 494
+++ +G ++ A++ M + P + + LL + N +L AA+ + E+
Sbjct: 405 VDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 495 MGYSVDVTASDVLM--VYIKEGSVDLALRWLRFMGSSGIR 532
D V++ +Y G + A R + M SG++
Sbjct: 462 -----DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 11/295 (3%)
Query: 260 NSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKG 319
N+L+ ++ G +A +++E M + D T+ +I ++ R A F +M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 320 RGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLET 379
G+ P +S++ + R ++H G+ + +L++ Y + G ++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A ++D ++ N + +I HA+ + A+ F M + GF P+ +YA L
Sbjct: 215 AQLVFDALE----SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 440 MHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSV 499
+++G ++ ++ M +G + LL + A + A KI +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV-- 328
Query: 500 DVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESA 554
V+ + +L Y + G A+ W M GIR N + +C SGL +
Sbjct: 329 -VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 348 VHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHA 407
VH + +R + +L+ Y K G LE A +++++M + +F +T +I ++
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYS 137
Query: 408 KSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLS 467
+ + A+ F+ M + G+ P T + +++ AA + +L+ G +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 468 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMG 527
+ LL L L+D A L A+ DV+ + ++ + + + AL + M
Sbjct: 198 VGSALLDLYTRYGLMDDAQ---LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 528 SSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
G R ++F LF +C +G E K + + S K+
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 40/283 (14%)
Query: 164 DAGLSLFRWAKRQSWYSPSDDCYVMLFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLV- 222
+ L LF+ R + PS Y LF + + + + + M+ SG L+
Sbjct: 244 EKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMI----KSGEKLVAF 298
Query: 223 ACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESM 282
A N ++ AK+ + + +KI D K D ++NSL+T + G +A +E M
Sbjct: 299 AGNTLLDMYAKSGSIHDA----RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 283 EKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRL 342
+ + ++ ++ + SG LD + ++ MK G P + ++VD +G+AG L
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 343 DSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYR--------- 393
+ A++ EM P I+ +L+ A R+ ++ Y
Sbjct: 415 NRALRFIEEM---PIEPTAAIWKALL----------NACRMHKNTELGAYAAEHVFELDP 461
Query: 394 ----PNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPS 432
P+ LY + +A G+ + A M+++G P+
Sbjct: 462 DDPGPHVILYNI----YASGGRWNDAARVRKKMKESGVKKEPA 500
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 17/284 (5%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+VA +I KA+K+E++ FK D + T+N++I+ ++ P +++
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFK---DMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
+M + +SS + ++ L ++ Q + + SL+ K G
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L A K+ M+ + + ++I Y + G + AL L+ EM RP++ +
Sbjct: 334 ELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKA-GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
V+ + +G ++I M+ F M + P P Y C++++ +G+++ A+KL SM
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP- 448
Query: 460 AGLRPGLSTYTVLL---TLLANKKLVDVAAKILLEM---KAMGY 497
RP + + LL + N +L + AA+ LL++ A GY
Sbjct: 449 --FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 143/354 (40%), Gaps = 37/354 (10%)
Query: 195 RSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKL------------EVSFC 242
RS D DG +F M + + SLL+ ++ + +A +L +
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 243 C------FKKIQDAGCKI---DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSST 293
C F+K Q ++ D ++N++IT + +G KA E++ SM + + +
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVS 188
Query: 294 YELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMR 353
+ MI + G L+ A F+ RG + + +++ KA +++ A + +M
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDM- 243
Query: 354 GFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLD 413
+ ++I YV++ + E L+L+ M G RPN + + + ++ L
Sbjct: 244 --TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 414 IAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLL 473
+ + K+ + L+ M+ G++ A KL+ M + + + ++
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMI 357
Query: 474 TLLANKKLVDVAAKILLEMKAMGYSVD-VTASDVLMVYIKEGSVDLALRWLRFM 526
+ A D A + EM D +T VL+ G V++ + + M
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 11/334 (3%)
Query: 167 LSLFRWAKR-QSWYSPSDDCYVMLFDGLNRSRDFDGV-QLLFDEMVGD-SANSGVSLLVA 223
L +R+A + +Y S ML+ L R+R FD + +LL + D S S ++ V
Sbjct: 92 LEFYRYASAIRGFYHSSFSLDTMLY-ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVV 150
Query: 224 CNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESME 283
RV + + + +E SF FK++ DT +N+L+ + A +Y S+
Sbjct: 151 LGRVAKLCSVRQTVE-SFWKFKRLVPDF--FDTACFNALLRTLCQEKSMTDARNVYHSL- 206
Query: 284 KTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD 343
K D T+ +++ S A F+EMKG+G +P + + SL+D K ++
Sbjct: 207 KHQFQPDLQTFNILLSGWKSSE---EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIE 263
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
A K+ +MR P Y ++I G+ + A + EMK G P+ A Y I
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ + +L A +M K G P +TY + + + + + +LY M
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGY 497
P + L+ + + VD+A ++ +M G+
Sbjct: 384 PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%)
Query: 221 LVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYE 280
+V N +I K ++E ++ K+++ D TY ++I G P KA E+ +
Sbjct: 246 VVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLK 305
Query: 281 SMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAG 340
M++ C D + Y I N + RL A KL EM +G P + + A
Sbjct: 306 EMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
Query: 341 RLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYT 400
L + ++++ M G P + LI+ + + K++ A+RLW++M + G+ +
Sbjct: 366 DLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 425
Query: 401 LVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
++++ K++ A +M + G P+ ++ + + + + D L M
Sbjct: 426 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D T+ MI + G +D AFKLF+EMK P I ++V + G+ G + ++
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+ R + +L+ Y +G ++ A + +M + N + T ++ ++K
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKC 291
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTY 469
G+LD A F EK + + ++ + S A++++ M +G++P + +
Sbjct: 292 GRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 470 TVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLM-VYIKEGSVD 517
+++ AN ++D A + + G +++ ++ L+ +Y K G +D
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 162/423 (38%), Gaps = 85/423 (20%)
Query: 255 DTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDS--------------------STY 294
D T+N++I + GL +AF+++E M+ ++ + D + Y
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 295 ELMIPN---------------LAKSGRLDAAFKLFQEMKGRGFRPGLNIFAS--LVDSMG 337
E +I N A +G +D A + F++M R N+F S +V
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR------NLFVSTAMVSGYS 289
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
K GRLD A + + + + ++I +YV+S + ALR+++EM +G +P+
Sbjct: 290 KCGRLDDAQVIFDQTE----KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQID--------- 448
VI + A G LD A S + G S L+ M+A G +D
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
Query: 449 ----------------------HAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 486
A+ L+ M + P T+ +L ++ LV+
Sbjct: 406 PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 487 KILLEMKAMGYSVDVTASDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCM 546
KI M Y++ + G +L L + S + +N I L +C
Sbjct: 466 KIFASMTD-EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 547 KSGLYE----SAKPLLETYVNSAAKVDLILYTSILAHLVRCQEEKNERHLMSILGATKHK 602
G E +AK +LE + L+L ++I A R ++ +N R +M K K
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGA--LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEK 582
Query: 603 AHS 605
S
Sbjct: 583 GLS 585
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVH 349
D ++ ++ ++GR + A +LF++M +PG F+S++ + L ++H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 350 MEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKS 409
+ G+ I +L++ Y K G ++ A +++D M + + +T +I HA
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALH 422
Query: 410 GKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLST 468
G A+S F +M++ G P + +L + G +D A +NSMT GL L
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 469 YTVLLTLLANKKLVDVAAKILLEM 492
Y + LL ++ A + +M
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKM 506
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 290 DSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPG-------LNIFASLVDSM-GKAGR 341
D +Y +I A+SG + A ++ +EM +P L IF+ VD + GK
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK--- 262
Query: 342 LDSAMKVHMEMRGFGYRP--PPTIYV--SLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
E+ G+ R +Y+ SL++ Y KS ++E + R++ + Y +
Sbjct: 263 ---------EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGI 309
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
+ ++ + ++G+ + A+ F M A P ++ ++ A + +L+ +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 458 TNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTASDVLMVYIKEGSVD 517
G + + L+ + + + A KI M + +V+ + ++M + G
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLD---EVSWTAIIMGHALHGHGH 426
Query: 518 LALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKV 568
A+ M G++ N + +C GL + A Y NS KV
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA----WGYFNSMTKV 473
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 31/327 (9%)
Query: 189 LFDGLNRSRDFDGVQLLFDEMVGDSANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQ 248
L DGL +S D + LFDEM +++ +I AK + + F++ +
Sbjct: 213 LVDGLVKSGDLVNAKKLFDEMPKRD-------IISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 249 DAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLD 308
+D +++LI + G P +AF+++ M C + E ++ L +
Sbjct: 266 G----VDVRAWSALILGYAQNGQPNEAFKVFSEM----CAKNVKPDEFIMVGLMSACSQM 317
Query: 309 AAFKLFQEMKGRGFRPGLNIFAS------LVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
F+L +++ +N F+S L+D K G +D A K+ EM P
Sbjct: 318 GCFELCEKVDSY-LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEM------PQRD 370
Query: 363 I--YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ Y S++E G A+RL+++M G P+ +T++++ +S ++ + F
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 421 DMEKA-GFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANK 479
M K L +P Y+C++ + + +G++ A +L SM + +L N
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT 490
Query: 480 KLVDVAAKILLEMKAMGYSVDVTASDV 506
++ +V A+ L E++ V S++
Sbjct: 491 EIAEVVARHLFELEPQSAGSYVLLSNI 517
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 61/313 (19%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLL-DSSTYELMIPNLA 302
F+++ G T +N LI + NK L ++ I M +T D T+ L++ +
Sbjct: 66 FERVPSPG----TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 303 KSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPT 362
+G++ + + GF + + S VD GK L SA KV FG P
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKV------FGEMPERN 175
Query: 363 I--YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFS 420
+ +L+ +YVKSG+LE A ++D M N + +++ KSG L A F
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFD 231
Query: 421 DMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 480
+M K + +Y +++ +A G +
Sbjct: 232 EMPKRDII----SYTSMIDGYAKGGDM--------------------------------- 254
Query: 481 LVDVAAKILLEMKAMGYSVDVTA-SDVLMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIR 539
V+A+ L E +A G VDV A S +++ Y + G + A + M + ++ + FI+
Sbjct: 255 ---VSARDLFE-EARG--VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 540 QLFESCMKSGLYE 552
L +C + G +E
Sbjct: 309 GLMSACSQMGCFE 321
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 29/336 (8%)
Query: 168 SLFRWAKRQSWYSPSDDCYVMLFDG------LNRSRDFDGV----QLLFDEMVGDSANSG 217
S+F ++ S P+D +V L R G+ + F+ MVG +
Sbjct: 216 SVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTA---- 271
Query: 218 VSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFE 277
+I +K + ++ F +++D I ++NS+I+ + G A E
Sbjct: 272 ---------LIDMYSKCRCWKSAYIVFTELKDTRNLI---SWNSVISGMMINGQHETAVE 319
Query: 278 IYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMG 337
++E ++ DS+T+ +I ++ G++ AFK F+ M P L SL+ +
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 338 KAGRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFA 397
L + ++H + + SLI+ Y+K G A R++D + P F
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF- 438
Query: 398 LYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSM 457
+ ++I + K G+ + A+ F + + P+ +T+ +L + G ++ +++ M
Sbjct: 439 -WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLM 497
Query: 458 TNA-GLRPGLSTYTVLLTLLANKKLVDVAAKILLEM 492
G +P ++ LL + A +++ +M
Sbjct: 498 QEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 158/358 (44%), Gaps = 25/358 (6%)
Query: 226 RVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKT 285
++I L+ + ++ F ++Q+ + NSLI PY+AF ++ M++
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQEP----NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 286 SCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLD-- 343
D+ TY ++ + L + ++ G + + +L+D + G L
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 344 SAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVI 403
AMK+ +M + S++ VK+G+L A RL+DEM + + + ++
Sbjct: 172 DAMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTML 223
Query: 404 ESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGLR 463
+ +A+ ++ A F M + + +++ ++ ++ +G ++ A +++ M
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPA-- 277
Query: 464 PGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTAS-DVLMVYIKEGSVDLALRW 522
+ T+T+++ A K L+ A +++ +M A G D A +L + G + L +R
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 523 LRFMGSSGIRTNNFIIRQLFESCMKSGLYESAKPLLETYVNSAAKVDLILYTSILAHL 580
+ S + +N +++ L + K G + A + N K DL+ + ++L L
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF----NDIPKKDLVSWNTMLHGL 391
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 122/264 (46%), Gaps = 18/264 (6%)
Query: 222 VACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYES 281
V+ N ++ L KA +L + +++ D + D ++N+++ + KAFE++E
Sbjct: 186 VSWNSMLGGLVKAGELRDA----RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEK 241
Query: 282 MEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRGFRPGLNI--FASLVDSMGKA 339
M + ++ ++ M+ +K+G ++ A +F +M P N+ + ++ +
Sbjct: 242 MPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWTIIIAGYAEK 293
Query: 340 GRLDSAMKVHMEMRGFGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALY 399
G L A ++ +M G + +S++ + +SG L +R+ +K + N +
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL 353
Query: 400 TLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTN 459
+++ +AK G L A F+D+ K + ++ +L G A++L++ M
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 460 AGLRPGLSTYTVLLTLLANKKLVD 483
G+RP T+ +L + L+D
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLID 433
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 20/263 (7%)
Query: 205 LFDEMVGD----SANSGVSLLVACNRVIQYLAKAEKLEVSFCCFKKIQDAGCKIDTETYN 260
L D+MV A + +S+L AC ++ L + ++ + + N
Sbjct: 302 LVDQMVASGLKFDAAAVISILAAC-------TESGLLSLGMRIHSILKRSNLGSNAYVLN 354
Query: 261 SLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGR 320
+L+ ++ G KAF+++ + K D ++ M+ L G A +LF M+
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 321 GFRPGLNIFASLVDSMGKAGRLDSAMKVHMEM-RGFGYRPPPTIYVSLIESYVKSGKLET 379
G RP F +++ S AG +D + M + + P Y L++ + G+L+
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKE 470
Query: 380 ALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLLE 439
A+++ M + PN ++ ++ + ++DIA ++ K P Y+ L
Sbjct: 471 AIKVVQTMPM---EPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPC-DPGNYSLLSN 526
Query: 440 MHAASGQIDHAMKLYNSMTNAGL 462
++AA+ + + + M + G+
Sbjct: 527 IYAAAEDWEGVADIRSKMKSMGV 549
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 11/251 (4%)
Query: 245 KKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAKS 304
+K+ D + + +N +I F + G + +++ M + S + ++ MI +L+K
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV----SWNSMISSLSKC 212
Query: 305 GRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFG-YRPPPTI 363
GR A +LF EM +GF P +++ G LD+ +H G ++ T+
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDM- 422
+L++ Y KSG LE A ++ +M+ R N + +I A +GK + + F M
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQ----RRNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Query: 423 EKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNA-GLRPGLSTYTVLLTLLANKKL 481
E+ P +T+ +L + +GQ++ +L+ M L Y ++ L++
Sbjct: 329 EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGR 388
Query: 482 VDVAAKILLEM 492
+ A K L M
Sbjct: 389 ITEAFKFLKNM 399
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 12/219 (5%)
Query: 244 FKKIQDAGCKIDTETYNSLITLFLNKGLPYKAFEIYESMEKTSCLLDSSTYELMIPNLAK 303
F IQ+ + +N++I + G P ++ + SM+ D TY ++ + +
Sbjct: 59 FSHIQNPNVLV----FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 304 SGRLDAAFKLFQEMKGRGFRPGLNIFASLVDSMGKAGRLDSAMKVHMEMRGFGYRPPPTI 363
L + E+ GF I +V+ GR+ A KV EM +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS----ERNVVV 170
Query: 364 YVSLIESYVKSGKLETALRLWDEMKIAGYRPNFALYTLVIESHAKSGKLDIAMSAFSDME 423
+ +I + SG +E L L+ +M + + +I S +K G+ A+ F +M
Sbjct: 171 WNLMIRGFCDSGDVERGLHLFKQMS----ERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 424 KAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAGL 462
GF P +T +L + A+ G +D ++++ ++GL
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265