Miyakogusa Predicted Gene
- Lj4g3v0216650.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0216650.3 tr|Q0DQQ9|Q0DQQ9_ORYSJ Os03g0569800 protein
OS=Oryza sativa subsp. japonica GN=Os03g0569800 PE=4
SV=,26.46,1e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; seg,NULL; SUBFAMILY NOT NAMED,NULL; FA,CUFF.46709.3
(422 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 5e-85
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 102 4e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 95 8e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 93 4e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 84 2e-16
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 2e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 83 4e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 83 4e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 5e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 8e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 9e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 72 1e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 4e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 5e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 2e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 55 7e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 52 7e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 50 3e-06
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 213/329 (64%), Gaps = 3/329 (0%)
Query: 86 EPFVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFL 145
E FVL VLSH DIL CLKFFDWA RQP F+HTRATF AIF+IL AKL L++DFL
Sbjct: 112 EKFVLDVLSHT--RYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFL 169
Query: 146 -RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
R H +R D LVVGYA+AG+ DIAL FG MRF+GLDLD FGYHVLLN+LVE
Sbjct: 170 DRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVE 229
Query: 205 DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV 264
+ ++FDVI +QI +G+ VT+ I++K CKQG+L+E E YL L+ + GS +
Sbjct: 230 EKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGL 289
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
LV LC +F+ A +L+ E G+ ++ AY +WIR L++ G L+ +F ++
Sbjct: 290 GILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISP 349
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
EG RYN+++ +LL+EN L+ VY +L +M P+ TMNA LCFFCK G D
Sbjct: 350 LEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVD 409
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLC 413
ALELY SRS+ G +P M+Y YLI TLC
Sbjct: 410 EALELYRSRSEIGFAPTAMSYNYLIHTLC 438
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 18/265 (6%)
Query: 145 LRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
L KF HKV+ ++ + G AGKP +A ++ + +D DG V N L+
Sbjct: 591 LLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLA-----RLVYDMMDRDGITPTVASNILML 645
Query: 205 DNY---QNAFDVIA--NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKE- 258
+Y + D + + +R +G ++I LCK +L++ +L + G G +
Sbjct: 646 QSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQP 705
Query: 259 -LHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
+ EVN + LC+ +++ AV LV EF SG + + ++ + EA
Sbjct: 706 SIECYEVN--IQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEA-- 761
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+ + R+ E +P LI + L ++ E C DM T N +L
Sbjct: 762 -WTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMI 820
Query: 378 CKLGMADVALELYSSRSQFGLSPNH 402
+ A+ A E+ ++ G PN
Sbjct: 821 V-MNQAEDAYEMVERIARRGYVPNE 844
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 2/184 (1%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVG-SGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
I I+ L K G L +L + G EL N +V L N + +++ E
Sbjct: 326 IWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMV 385
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P + + + G +DEALE +R R G+ P+ + YN LI L +
Sbjct: 386 RGVSPNKKTMNAALCFFCKAGFVDEALELYRS-RSEIGFAPTAMSYNYLIHTLCANESVE 444
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
Y +L + T + + C G D+A EL + ++ L P +A +I
Sbjct: 445 QAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKII 504
Query: 410 LTLC 413
LC
Sbjct: 505 SALC 508
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ GY K D L M +GL+ + Y+V++N L + + ++
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R+GY VT +IK CK+G + ++ G L+ +C +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
RA+E + + G P E Y + G + G ++EA R+ D+ G+ PS V YN L
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNAL 421
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I ++ D +L DM E PD+V+ + VL FC+ D AL + + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 399 SPNHMAYKYLILTLC 413
P+ + Y LI C
Sbjct: 482 KPDTITYSSLIQGFC 496
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED 205
R +S VT+ +TL+ GY G AL + +M GL Y L++S+ +
Sbjct: 304 RGYSLDEVTY-----NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 206 NYQNAFDVIANQIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV 264
N +Q+R +G + T ++ ++G + E L + +G
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
N L+ C + + E A+ ++ + G P +Y + G R +DEAL R+ +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+G P + Y++LI + R + L +M PD T A++ +C G +
Sbjct: 479 -KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 385 VALELYSSRSQFGLSPNHMAYKYLI 409
AL+L++ + G+ P+ + Y LI
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
N L+ C + + A+ L + T G P Y I G + ++D+ + R
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA- 267
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+G P+ + YN +I L RE R+ +V ++L +MN D VT N ++ +CK G
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
AL +++ + GL+P+ + Y LI ++C G
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 116/306 (37%), Gaps = 70/306 (22%)
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
+ ++ +V+ V ++ L+ G+ AG D+AL LF KM +G + Y+ L++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID-- 248
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
GY CK ++++ L + G E +
Sbjct: 249 -------------------GY-------------CKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRG----------------- 305
N ++ LC R + ++ E G E Y I+G
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 306 ------------------LVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
+ + G ++ A+EF Q R G P+ Y TL+ ++
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR-VRGLCPNERTYTTLVDGFSQKGY 395
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
+N+ Y +L +MN+ P +VT NA++ C G + A+ + + GLSP+ ++Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 408 LILTLC 413
++ C
Sbjct: 456 VLSGFC 461
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 22/273 (8%)
Query: 145 LRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
LR+ + + V ++ L+ G+ + GK + A+ + M+ +GL D Y +L+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 205 D-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
+ A V + + +T +I+ C+Q R +E ++ G
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
L+ C E+A++L E G P Y + I GL + R EA K
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL-KL 581
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
E VPS V Y+TLI E C+ + ++ +++ FC GM
Sbjct: 582 FYEESVPSDVTYHTLI--------------------ENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A +++ S P+ AY +I C G
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS-LVEDNYQNAFDVIANQI 218
+ +L+ G+ + A L+ +M GL D F Y L+N+ +E + + A + +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL-CDSNRF 277
+ VT ++I L KQ R E + L L +E S+V + + C + F
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY--EESVPSDVTYHTLIENCSNIEF 605
Query: 278 ERAVELVREFGTSGSF----------------PLENAYGLWIRGLVRGGRLDEALEFFRQ 321
+ V L++ F G P AY + I G R G + +A +++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
S G++ V L+ L +E ++N++ +++ + +C L + ++ + G
Sbjct: 666 MVKS-GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREG 724
Query: 382 MADVALELYSSRSQFGLSPNHMA 404
DV L++ + ++ G PN ++
Sbjct: 725 NMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 2/297 (0%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F T+ + ++ ++ L ++ LRK + + ++ G G D A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
+LF +M +G D Y+ L+ + + ++ + I+RK + VT ++I
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
K+G+L E + L ++ G + N L+ C NR E A+++V + G P
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
+ + I G + R+D+ LE FR+ G + + V YNTL+ + +L L
Sbjct: 404 MTFNILINGYCKANRIDDGLELFRE-MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+M PD+V+ +L C G + ALE++ + + + Y +I +C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+TLV G + GK A+ L +M G + Y +LN + + Q A +A ++ R
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG-QTA---LAMELLR 252
Query: 221 KGYESH-----VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
K E + V I+I LCK G L+ N + G + N L+G C++
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
R++ +L+R+ P + + I V+ G+L EA + ++ G P+ + Y
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITY 371
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
N+LI +ENRL + ++ M PD++T N ++ +CK D LEL+ S
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 396 FGLSPNHMAYKYLILTLCWDG 416
G+ N + Y L+ C G
Sbjct: 432 RGVIANTVTYNTLVQGFCQSG 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 6/304 (1%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPD 174
Q R T F +F +++ K L+L ++ + H + ++ + K
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVI 233
A GK+ G + D ++ LLN L +E A +++ + + +T ++
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSG 291
LC G++ + ++ +V +G +EV + ++ V+C S + A+EL+R+
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
Y + I GL + G LD A F + + +G+ + YNTLI R +D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
LL DM + P++VT + ++ F K G A +L Q G++PN + Y LI
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 412 LCWD 415
C +
Sbjct: 378 FCKE 381
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 4/249 (1%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHV- 227
+G+ +A+ L KM + + LD Y ++++ L +D + NAF++ N++ KG+++ +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF-NEMEIKGFKADII 299
Query: 228 TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
T +I C GR ++ L ++ + + L+ + A +L++E
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G P Y I G + RL+EA++ S+G P + +N LI + NR
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANR 418
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
++D L +M+ + + VT N ++ FC+ G +VA +L+ + P+ ++YK
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 408 LILTLCWDG 416
L+ LC +G
Sbjct: 479 LLDGLCDNG 487
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 5/213 (2%)
Query: 142 LDFLRKFS-RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
L+ R+ S RG + + V ++ TLV G+ +GK ++A LF +M + + D Y +LL+
Sbjct: 423 LELFREMSLRGVIANTVTYN-TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 201 SLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKEL 259
L ++ I +I + E + ++I H +C ++++ L G +L
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
N ++ LC + +A L R+ G P E Y + IR + A E
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
+ + S G+ P+ V ++ +L L+ +
Sbjct: 602 EEMK-SSGF-PADVSTVKMVINMLSSGELDKSF 632
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 9/266 (3%)
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN- 206
RG + + ++ +L+ G+ + + A+ + M +G D D +++L+N + N
Sbjct: 360 MQRGIAPNTITYN-SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 207 YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ ++ R + VT +++ C+ G+LE + +V
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLW---IRGLVRGGRLDEALEFFRQKR 323
L+ LCD+ E+A+E+ FG +E G++ I G+ ++D+A + F
Sbjct: 479 LLDGLCDNGELEKALEI---FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF-CSL 534
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
+G YN +I L R++ L+ L M E PD +T N ++ A
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLI 409
A EL G + K +I
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 1/225 (0%)
Query: 198 LLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGK 257
L + LV +A D+ + I+ + + + + + K + E V A + G
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI 119
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
++ ++ C + A + + G P + + GL R+ EALE
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+ + G+ P+ + NTL+ L +++D L+ M ET P+ VT VL
Sbjct: 180 LVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPSGPF 422
CK G +A+EL + + + + Y +I LC DG F
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 4/315 (1%)
Query: 100 GDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRF 159
G + CLK ++ + R T++++ L A + + + V
Sbjct: 269 GRVDDCLKIWERMKQNER-EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++T++ G+ GK +L L+ M + ++ Y++L+ L+E+ + +I +
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 220 RKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KGY + T I I LC G + + + + SG L ++ LC R E
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A LV+E G + I GL+R RL EA FF ++ G P+ V YN L
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNIL 505
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
IC L + + + + +M E PD+ T + +LC C+ D+ALEL+ Q GL
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 399 SPNHMAYKYLILTLC 413
+ M + LI LC
Sbjct: 566 ETDVMMHNILIHGLC 580
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 37/290 (12%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIANQI 218
++ L+ G GK D A ++ M +G D Y + ++ L + Y N A V+
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G+ +I LCK+ RLEE + + G EL+ N L+G L +R
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A +RE G +G P +Y + I GL + G+ EA F ++ ++ G+ P Y+ L
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSIL 540
Query: 339 ICRLLRE-----------------------------------NRLNDVYYLLMDMNETCT 363
+C L R+ +L+D ++ +M
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
++VT N ++ F K+G ++ A ++ + GL P+ ++Y ++ LC
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 36/305 (11%)
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE- 204
R V V+ H+ ++ G + G+ D L ++ +M+ + D + Y L++ L +
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 205 -------------DNYQNAFDVIANQIRRKGY-------ES--------HVTNV------ 230
D + + DV+ G+ ES H +V
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
I+IK L + G+++E + G + + LC + +A+ +++E +S
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G AY I L + RL+EA ++ + SHV N LI L+R++RL +
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV-CNALIGGLIRDSRLGE 482
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
+ L +M + P +V+ N ++C CK G A + G P+ Y L+
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 411 TLCWD 415
LC D
Sbjct: 543 GLCRD 547
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 8/311 (2%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAKL---RPLILDFLRKFSRGRVTHKVRFHDTLV 164
FD A R P + H+ + I R LS ++ I++ +R + V +++
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS-QECKCDEDVAL--SVI 85
Query: 165 VGYAIAGKPDIALHLFGKMR-FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY 223
Y PD AL +F +MR G + Y+ LLN+ VE + + G
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 224 ESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVE 282
++ T ++IK CK+ E+ +L+ + G + + ++ L + + + A+E
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 283 LVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRL 342
L E G P Y + I G ++ A+E + + + P+ +N +I L
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
Query: 343 LRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
+ R++D + M + D+ T ++++ C G D A +++ + S +
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV 325
Query: 403 MAYKYLILTLC 413
+ Y ++ C
Sbjct: 326 VTYNTMLGGFC 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 12/316 (3%)
Query: 102 ILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHD 161
+ S +F+ AG P T+ + ++ + K FL + V +
Sbjct: 133 VESLFAYFETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS-LVEDNYQNAFDVIANQIRR 220
T++ A AGK D AL LF +M +G+ D Y++L++ L E +++ A ++ +
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 221 KG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
Y + T+ I+I L K GR+++ + + +E + L+ LCD+ ++
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR--QKRDSEGYVPSHVRYNT 337
A + E + Y + G R G++ E+LE +R + ++S V YN
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS----YNI 364
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
LI LL ++++ + M D T + C G + AL + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 398 LSPNHMAYKYLILTLC 413
+ AY +I LC
Sbjct: 425 GHLDVYAYASIIDCLC 440
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 115/300 (38%), Gaps = 42/300 (14%)
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED 205
+ ++ + T+ + H V GY + AL + ++ G LD + Y +++ L +
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYV-----NKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 206 NYQNAFDVIANQIRRKGYE--SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
+ ++ + G E SHV N + I L + RL E +L + +G
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNAL-IGGLIRDSRLGEASFFLREMGKNGCRPTVVS 501
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ-- 321
N L+ LC + +F A V+E +G P Y + + GL R ++D ALE + Q
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 322 ----------------------KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
K D V +++ + L+ N L + ++ + D N
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 360 ETCTL----------PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ PD+++ N ++ C A+E + G+ P + L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 9/279 (3%)
Query: 141 ILDFLRK--FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVL 198
+LD +R FS VT+ + ++ GK D+AL + ++ Y +L
Sbjct: 180 VLDRMRSKDFSPDTVTYNI-----MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 199 LN-SLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGK 257
+ +++E A ++ + R T +I+ +CK+G ++ + L G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
E N L+ L + ++E +L+ + + P Y + I L R G+++EA+
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+ ++ +G P Y+ LI RE RL+ L M LPD+V N VL
Sbjct: 355 LLKLMKE-KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
CK G AD ALE++ + G SPN +Y + L G
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 6/277 (2%)
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
+++ L KF + V ++ L+ G+ + D A + +MR + D Y++++
Sbjct: 146 VMEILEKFGQPDVFA----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
Query: 201 SLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
SL + + NQ+ + V T I+I+ +G ++E ++ ++ G +
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
N ++ +C +RA E+VR G P +Y + +R L+ G+ +E E
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG-EKL 320
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
K SE P+ V Y+ LI L R+ ++ + LL M E PD + + ++ FC+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G DVA+E + G P+ + Y ++ TLC +G
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 6/306 (1%)
Query: 114 RQPRFNHTRATF-AAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
R F+ T+ I + SR KL L L L + V + L+ + G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKL-DLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIANQIRRKGYESHVTNV- 230
D AL L +M +GL D F Y+ ++ + ++ + AF+++ N + KG E V +
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGCEPDVISYN 302
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
I+++ L QG+ EE E + + + + + L+ LC + E A+ L++
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G P +Y I R GRLD A+EF + S+G +P V YNT++ L + + +
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFL-ETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
+ + E P+ + N + G AL + G+ P+ + Y +I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 411 TLCWDG 416
LC +G
Sbjct: 482 CLCREG 487
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQI 218
++T++ G G D A + + +G + D Y++LL +L+ + ++ ++
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
K + VT I+I LC+ G++EE L + G + L+ C R +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A+E + + G P Y + L + G+ D+ALE F K G P+ YNT+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF-GKLGEVGCSPNSSSYNTM 444
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
L +++++M PD +T N+++ C+ GM D A EL
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 399 SPNHMAYKYLILTLC 413
P+ + Y ++L C
Sbjct: 505 HPSVVTYNIVLLGFC 519
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRR 220
TL+ G + G+ AL L +M G D Y +LN L + N A D+ R
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
S V IVI LCK G ++ + N + G + + L+G LC+ +++
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+++RE P + I V+ G+L EA E + + + G P + YN+LI
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLID 358
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+EN L++ + M PD+VT + ++ +CK D + L+ S GL P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 401 NHMAYKYLILTLCWDG 416
N + Y L+L C G
Sbjct: 419 NTITYNTLVLGFCQSG 434
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 119/297 (40%), Gaps = 2/297 (0%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F T+ + L ++ L LD RK + V + ++ G D AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
LF +M +G+ D Y L+ L D + + ++ I R VT +I
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
K+G+L E + N ++ G N L+ C N A ++ + G P
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y + I + R+D+ + FR+ S+G +P+ + YNTL+ + +LN L
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+M P +VT +L C G + ALE++ + ++ Y +I +C
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 6/306 (1%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPD 174
Q R T F + ++R K L+L F + + H + ++ Y K
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVI 233
A + G+ G + D + L+N +E A ++ + K VT +I
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSG 291
LC +GR+ E ++ +V G EV + ++ LC S A++L R+
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYG--FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
Y + I L + G D+AL F + + +G V Y++LI L + + +D
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNE-MEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
+L +M +PD+VT +A++ F K G A ELY+ G++P+ + Y LI
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 412 LCWDGC 417
C + C
Sbjct: 360 FCKENC 365
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 2/267 (0%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
LR+ + V L+ + GK A L+ +M +G+ D Y+ L++
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 204 EDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
++N + + + + + KG E VT I+I CK R+++ + G +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N LV C S + A EL +E + G P YG+ + GL G L++ALE F +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
+ S + + YN +I + ++++D + L +++ PD+VT N ++ CK G
Sbjct: 482 QKSRMTLGIGI-YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLI 409
A L+ + G +P+ Y LI
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
S+G + + + ++ TLV+G+ +GK + A LF +M +G+ Y +LL+ L ++
Sbjct: 413 SKGLIPNTITYN-TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 209 NAFDVIANQIRRKGYESHVT-----NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
N A +I K +S +T I+I +C ++++ + L G +
Sbjct: 472 NK----ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
N ++G LC A L R+ G P + Y + IR + G L ++E + +
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 6/302 (1%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + ++ ++ L ++ LRK + + ++ G G
Sbjct: 223 GCQP----NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVI 231
D A +LF +M +G+ + Y++L+ + + ++ + I+RK + VT +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+L E E ++ G L+ C N ++A ++V + G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P + + I G + R+D+ LE FR K G V V YNTLI +LN
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
L +M P++VT +L C G ++ ALE++ + + + Y +I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 412 LC 413
+C
Sbjct: 518 MC 519
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHV- 227
+G+ +A+ L KM + + LD Y ++++ L + + NAF++ N++ KG +++
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF-NEMEMKGITTNII 299
Query: 228 TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDS----NRFERAVEL 283
T I+I C GR ++ L ++ ++++ + V F VL DS + A EL
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIK--RKINPNVVTF--SVLIDSFVKEGKLREAEEL 355
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
+E G P Y I G + LD+A + S+G P+ +N LI
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYC 414
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+ NR++D L M+ + D VT N ++ FC+LG +VA EL+ + PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 404 AYKYLILTLCWDG 416
YK L+ LC +G
Sbjct: 475 TYKILLDGLCDNG 487
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 2/294 (0%)
Query: 121 TRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLF 180
T F+ +F +++ K L+L ++ + H + ++ + K +A
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 181 GKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQ 239
GK+ G + + + L+N L +E A +++ + +T ++ LC
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 240 GRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAY 299
G+ E ++ +V G + + ++ V+C S + A+EL+R+ Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
+ I GL + G LD A F + + +G + + YN LI R +D LL DM
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNE-MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ P++VT + ++ F K G A EL+ G++P+ + Y LI C
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIA 215
+R + L+ GY A + D L LF KM +G+ D Y+ L+ E N A ++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ RK + VT I++ LC G E+ + S EL N ++ +C+++
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ + A +L G P Y + I GL + G L EA FR K + +G+ P Y
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR-KMEEDGHAPDGWTY 581
Query: 336 NTLI 339
N LI
Sbjct: 582 NILI 585
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 37/291 (12%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
TL+ G + G+ AL L +M G D + L+N L + ++ +++
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 222 GYESH-VTNVIVIKHLCKQG----------RLEE----VEAYLNGLVGSGKELHGS---- 262
G + + VT V+ +CK G ++EE ++A ++ G HGS
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 263 -----------------EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRG 305
N L+G C++ R++ +L+R+ P + + I
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 306 LVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
V+ G+L EA E ++ G P + Y +LI +EN L+ ++ M P
Sbjct: 343 FVKEGKLREAEELHKEMI-HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 366 DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ T N ++ +CK D LEL+ S G+ + + Y LI C G
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 275 NRFERAVELVREFGTSGSF------PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
N F R +L F G P + I GL GR+ EALE + + G+
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM-GH 189
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P + NTL+ L + + L+ M E P+ VT VL CK G +A+E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDGCPSGPF 422
L + + + + Y +I LC G F
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
FL+ + + V F++ +++ + D+A +F +M +GL+ + F Y +L++
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 204 ED-NYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGK-ELH 260
++ + QNA+DVI NQ+ +E++ V +I LCK G+ + + L L+ + +
Sbjct: 531 KNKDEQNAWDVI-NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
+ N ++ + AVE RE +G P + I G + R+D ALE
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 321 QKRDSEGYV--PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
+ + E + P+ Y LI ++N + Y L ++ E +P++ N+++ F
Sbjct: 650 EMKSMELKLDLPA---YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 379 KLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
LG D A++LY G+S + Y +I L DG
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 4/244 (1%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYE-SHVTN 229
KP+ A+ +F ++ +G + DG + + + + + + A D++ + G S T
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
VI K+G +EE ++ +VG G + LV C N +A++L
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P + + + + + +++A+EF+ + + S PS V +T+I L+
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK-SVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ D E+ + N + FCK G D A Q G+ PN + Y ++
Sbjct: 433 AALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 410 LTLC 413
L C
Sbjct: 492 LAHC 495
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 12/278 (4%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
++F + R+ T++ G A P+ AL +F F+ GF + +
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLL 458
Query: 202 LVEDNYQNAFDVIANQIRRKGYESHVT--NVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
+ +A + +KG E +V N +++ H C+ ++ + + ++ G E
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH-CRMKNMDLARSIFSEMLEKGLEP 517
Query: 260 HGSEVNFLVGVLCD---SNRFER-AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEA 315
+ NF +L D N+ E+ A +++ + S E Y I GL + G+ +A
Sbjct: 518 N----NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 316 LEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLC 375
E + + Y S YN++I ++ + +M+E P++VT +++
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 376 FFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
FCK D+ALE+ L + AY LI C
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 4/312 (1%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVG 166
+FF WA R+ +R +F + +LS L L + G V+ L+
Sbjct: 78 RFFIWASRR-ERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISA 136
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN--YQNAFDVIANQIRRKGYE 224
YA G + A+ FG+M+ D F Y+V+L ++ + + AF V ++
Sbjct: 137 YAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSP 196
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+ T I++ L K+GR + + + + G G + L+ LC + A +L
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
E TSG++P A+ + G + GR+ EA E R + +G+V Y++LI L R
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL-FEKDGFVLGLRGYSSLIDGLFR 315
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
R + L +M + PD++ ++ K G + AL+L SS G+SP+
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 405 YKYLILTLCWDG 416
Y +I LC G
Sbjct: 376 YNAVIKALCGRG 387
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 41/290 (14%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQI 218
H+ L+ G+ G+ A L G L GY L++ L Y AF++ AN +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
++ + I+I+ L K G++E+ L+ + G N ++ LC E
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
L E + SFP + + I + R G + EA E F + S G PS +N L
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS-GCSPSVATFNAL 449
Query: 339 ICRLLRENRLNDVYYLLMDMN--------------------------------------- 359
I L + L + LL M
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+T + PD+V+ N ++ FC+ G D AL+L + GLSP+ + Y LI
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 2/255 (0%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG 222
L+ G G+ A +F M +G+ + Y +L++ L + + + +++ G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
Query: 223 -YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
Y V + ++ CK GR+ E L G L + L+ L + R+ +A
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
EL P Y + I+GL + G++++AL+ S+G P YN +I
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL-SSMPSKGISPDTYCYNAVIKA 382
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
L L + L ++M+ET + PD T ++C C+ G+ A E+++ + G SP+
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 402 HMAYKYLILTLCWDG 416
+ LI LC G
Sbjct: 443 VATFNALIDGLCKSG 457
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 118/294 (40%), Gaps = 8/294 (2%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
++++ L RA+ + + + + + L+ G + AGK + AL L M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 185 FQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLE 243
+G+ D + Y+ ++ +L + + + + T+ I+I +C+ G +
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR--EFGTSGSF--PLENAY 299
E E + SG + N L+ LC S + A L+ E G S L ++
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
+V G + +A D+ G P V YN LI R ++ LL +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADT-GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
PD VT N ++ ++G + A +L+ ++ F SP Y+ L+ C
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSC 596
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 35/291 (12%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIR 219
+TLV G AG A+ + M +G D D + Y+ +++ L + + A +V+ I
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
R + VT +I LCK+ ++EE L G N L+ LC +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ------------------ 321
A+EL E + G P E Y + I L G+LDEAL +Q
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 322 -------KRDSE---------GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
R++E G + V YNTLI L + R+ D L+ M P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 366 DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
D T N++L FC+ G A ++ + + G P+ + Y LI LC G
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 123 ATFAAIFRILSRA-KLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
+TF + + L RA +LRP IL S G V + F T++ GY G
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT-TVMQGYIEEG---------- 238
Query: 182 KMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-----SHVTNVIVIKHL 236
DLDG A +IR + E S+V+ +++
Sbjct: 239 -------DLDG----------------------ALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 237 CKQGRLEEVEAYLNGLVGS-GKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPL 295
CK+GR+E+ ++ + G N LV LC + + A+E++ G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 296 ENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
Y I GL + G + EA+E Q RD P+ V YNTLI L +EN++ +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS---PNTVTYNTLISTLCKENQVEEATE 386
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
L + LPD+ T N+++ C VA+EL+ G P+ Y LI +LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 414 WDG 416
G
Sbjct: 447 SKG 449
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 16/324 (4%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D + L+ F+ A ++P F+ A + I L R+ + L R
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQ-GLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
L+ YA D L + M + GL D Y+ +LN LV+ N ++ ++
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 220 RKGYESHVTNV-IVIKHLCKQGRL-------EEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
G + V+ ++IK LC+ +L E++ +Y GLV K ++
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGYIEE-- 237
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
D + R E + EFG S S + + + G + GR+++AL F ++ + +G+ P
Sbjct: 238 GDLDGALRIREQMVEFGCSWS---NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
+NTL+ L + + ++ M + PD+ T N+V+ CKLG A+E+
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 392 SRSQFGLSPNHMAYKYLILTLCWD 415
SPN + Y LI TLC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKE 378
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 35/249 (14%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
++L+ G + +A+ LF +MR +G + D F Y++L++SL
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL------------------ 445
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
C +G+L+E L + SG N L+ C +N+ A
Sbjct: 446 ----------------CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
E+ E G Y I GL + R+++A + Q EG P YN+L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGQKPDKYTYNSLLT 548
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
R + ++ M PD+VT ++ CK G +VA +L S G++
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 401 NHMAYKYLI 409
AY +I
Sbjct: 609 TPHAYNPVI 617
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 128 IFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQG 187
I + S+ KL L+ L++ V ++TL+ G+ A K A +F +M G
Sbjct: 442 IDSLCSKGKLDE-ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 188 LDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVE 246
+ + Y+ L++ L + ++A ++ I T ++ H C+ G +++
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
+ + +G E L+ LC + R E A +L+R G +AY I+GL
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 307 VRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
R + EA+ FR+ + P V Y
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSY 649
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 4/276 (1%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
++K + + ++T++ Y G+ A+ L M+ +G+D D Y++L++ L
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 204 EDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
N + ++ + +R + + VT +I +G++ LN ++ G +
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF-RQ 321
N L+ F+ A+++ G P E +YG+ + GL + D A F+ R
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
KR+ G + Y +I L + L++ LL +M++ PD+VT +A++ FCK+G
Sbjct: 435 KRN--GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
A E+ + GLSPN + Y LI C GC
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 124/322 (38%), Gaps = 53/322 (16%)
Query: 106 LKFFDWAGRQPRF--NHTRATFAAIFRILSRAKLRPLILDFLRKFSR---------GRVT 154
LKF W +QP +H IL RA++ L++ S G +
Sbjct: 94 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALM 153
Query: 155 HKVRF-------HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
R +D L+ Y G +L +F M G + + + +L S+V
Sbjct: 154 TTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV---- 209
Query: 208 QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ G + V + + K + K+ +V + N L
Sbjct: 210 ------------KSGEDVSVWSFL--KEMLKRKICPDVATF----------------NIL 239
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ VLC FE++ L+++ SG P Y + + GR A+E + S+G
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK-SKG 298
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
YN LI L R NR+ Y LL DM + P+ VT N ++ F G +A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 388 ELYSSRSQFGLSPNHMAYKYLI 409
+L + FGLSPNH+ + LI
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALI 380
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 7/267 (2%)
Query: 151 GRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQN 209
GR+T+ ++ G G D A+ L +M G+D D Y L+N + ++
Sbjct: 442 GRITYT-----GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
A +++ R + + +I + C+ G L+E ++ G N LV
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
LC + + A E +R + G P ++ I G G +A F + G+
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV-GHH 615
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P+ Y +L+ L + L + L ++ D V N +L CK G A+ L
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 390 YSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ Q + P+ Y LI LC G
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 124/340 (36%), Gaps = 22/340 (6%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRI-LSRAKL--RPLILDFL 145
+L +S G D DI++ + + RF + I+R+ LS + LI +
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 146 RKFSRGRVTHKVRFHDT---------------LVVGYAIAGKPDIALHLFGKMRFQGLDL 190
R G + +R ++ LV AGK A M G+
Sbjct: 525 R---MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 191 DGFGYHVLLNSLVEDNYQ-NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYL 249
+ + L+N AF V + + + T ++K LCK G L E E +L
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 250 NGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG 309
L + N L+ +C S +AV L E P Y I GL R
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 310 GRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVT 369
G+ A+ F ++ +P+ V Y + + + + Y M+ PD+VT
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Query: 370 MNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
NA++ + ++G + +L PN Y L+
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 2/258 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQI 218
++ L+ GY+ + L+ + G+ D H L+ + E N + ++ I
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R T ++I C G + + + G L + +V VL ++RF+
Sbjct: 857 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+ ++ E G P Y I GL R G + A +++ + P +V + +
Sbjct: 917 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF-VVKEEMIAHKICPPNVAESAM 975
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ L + + ++ LL M + +P + + ++ CK G ALEL S GL
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 399 SPNHMAYKYLILTLCWDG 416
+ ++Y LI LC G
Sbjct: 1036 KLDLVSYNVLITGLCAKG 1053
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 3/260 (1%)
Query: 151 GRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN- 209
G + K+ H +LV+G + +I L + +G+++D + +++L++ + N
Sbjct: 824 GILPDKLTCH-SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
AFD++ T ++ L + R +E L+ + G + L+
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
LC + A + E P A +R L + G+ DEA R + V
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK-LV 1001
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P+ + TL+ + + + L + M+ D+V+ N ++ C G +A EL
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061
Query: 390 YSSRSQFGLSPNHMAYKYLI 409
Y G N YK LI
Sbjct: 1062 YEEMKGDGFLANATTYKALI 1081
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
S + L+ V + ++E+ R G G P + +V+ G D ++ F +
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLK 222
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ P +N LI L E YL+ M ++ P +VT N VL ++CK G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
A+EL G+ + Y LI LC
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 5/274 (1%)
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
+LD +R RG T V ++ LV G G+ D A+ M G + ++++L
Sbjct: 261 LLDEMR--DRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 201 SLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
S+ + +A ++A+ +R+ S VT I+I LC++G L L + G +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
+ N L+ C + +RA+E + + G +P Y + L + G++++A+E
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
Q S+G P + YNT+I L + + LL +M PD +T ++++ +
Sbjct: 438 NQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
G D A++ + + G+ PN + + ++L LC
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 2/277 (0%)
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
I + L R V+ V ++T++ +GK A+ + +M + D Y +L+
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 201 SLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
+ D+ + +++R +G V T +++ +CK+GRL+E +LN + SG +
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
+ N ++ +C + R+ A +L+ + G P + + I L R G L A++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
+K G P+ + YN L+ +E +++ L M PD+VT N +L CK
Sbjct: 368 -EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G + A+E+ + S G SP + Y +I L G
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQI 218
++ ++ GY AG+ + AL + +M + D Y+ +L SL + + A +V+ +
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+R Y +T I+I+ C+ + L+ + G N LV +C R +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A++ + + +SG P + + +R + GR +A + +G+ PS V +N L
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNIL 350
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I L R+ L +L M + P+ ++ N +L FCK D A+E G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 399 SPNHMAYKYLILTLCWDG 416
P+ + Y ++ LC DG
Sbjct: 411 YPDIVTYNTMLTALCKDG 428
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 5/255 (1%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRR 220
TL+ G+ GK A + + G D Y+V+++ + NA V+ R
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RM 198
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
VT +++ LC G+L++ L+ ++ L+ C + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
++L+ E G P Y + + G+ + GRLDEA++F S G P+ + +N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND-MPSSGCQPNVITHNIILR 317
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+ R D LL DM P +VT N ++ F C+ G+ A+++ Q G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 401 NHMAYKYLILTLCWD 415
N ++Y L+ C +
Sbjct: 378 NSLSYNPLLHGFCKE 392
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVRE 286
+T ++I CK G + + L+ + S + N ++ LCDS + ++A+E++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEVLDR 229
Query: 287 FGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLREN 346
+P Y + I R + A++ + RD G P V YN L+ + +E
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEG 288
Query: 347 RLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYK 406
RL++ L DM + P+++T N +L C G A +L + + G SP+ + +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 407 YLILTLCWDG 416
LI LC G
Sbjct: 349 ILINFLCRKG 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 140 LILDFLRK-FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVL 198
L+ D LRK FS VT + + + + G+ A+ + KM G + Y+ L
Sbjct: 331 LLADMLRKGFSPSVVTFNILIN--FLCRKGLLGR---AIDILEKMPQHGCQPNSLSYNPL 385
Query: 199 LNSLV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGK 257
L+ E A + + + R Y VT ++ LCK G++E+ LN L G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
N ++ L + + +A++L+ E P Y + GL R G++DEA++
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 318 FFRQKRDSEGYVPSHVRYNTL---ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
FF + + G P+ V +N++ +C+ + +R D +L+ +N C P+ + ++
Sbjct: 506 FFHE-FERMGIRPNAVTFNSIMLGLCKSRQTDRAID--FLVFMINRGCK-PNETSYTILI 561
Query: 375 CFFCKLGMADVALELYSSRSQFGL 398
GMA ALEL + GL
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGL 585
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 223 YESHVTNVI----VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
Y +V ++I +I+ C+ G+ + L L GSG N ++ C +
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A+ ++ S P Y +R L G+L +A+E + + Y P + Y L
Sbjct: 190 NALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTIL 245
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I R++ + LL +M + PD+VT N ++ CK G D A++ + G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 399 SPNHMAYKYLILTLCWDG 416
PN + + ++ ++C G
Sbjct: 306 QPNVITHNIILRSMCSTG 323
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 114 RQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKP 173
R+ +F + + + S ++L ++ V TL+ G+A G+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVI 233
D AL L +M+ LD D Y+V ++S
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSF------------------------------- 248
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSG 291
K G+++ + + + +G L EV + ++GVLC +NR + AVE+ +
Sbjct: 249 ---GKVGKVDMAWKFFHEIEANG--LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P AY I G G+ DEA ++R ++G +PS + YN ++ L + ++++
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR-AKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
+ +M + P++ T N ++ C+ G D A EL S + GL PN ++
Sbjct: 363 LKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 412 LC 413
LC
Sbjct: 422 LC 423
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 12/318 (3%)
Query: 97 GGDGDILSCLKFF---DWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRV 153
G G + KFF + G +P T+ ++ +L +A ++ + R
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKP----DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDV 213
++T+++GY AGK D A L + R +G Y+ +L L + +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 214 IANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCD 273
+ ++++ + T I+I LC+ G+L+ + + +G + VN +V LC
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
S + + A + E P E + I GL + GR+D+A + + + DS+ S V
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 334 RYNTLICRLLRENRLNDVYYLLMDM-NETCTLPDMVTMNAVL-CFFCKLGMADVALELYS 391
Y +LI R D + + DM N+ C+ PD+ +N + C F K G + ++
Sbjct: 485 -YTSLIKNFFNHGRKEDGHKIYKDMINQNCS-PDLQLLNTYMDCMF-KAGEPEKGRAMFE 541
Query: 392 SRSQFGLSPNHMAYKYLI 409
P+ +Y LI
Sbjct: 542 EIKARRFVPDARSYSILI 559
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
I+I L K G E + G L N ++ C + +A +L+ E T
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G P YG I GL + RLDEA F + + S+ + V Y++LI + R+++
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
Y +L ++ + P++ T N++L K + AL + S + +PN + Y LI
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 411 TLC 413
LC
Sbjct: 736 GLC 738
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 2/259 (0%)
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAF 211
R R + L+ G AG + LF M+ QG LD Y+++++ + N
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 212 DVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
+ +++ KG+E + VT VI L K RL+E EL+ + L+
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVP 330
R + A ++ E G P + + LV+ ++EAL F+ ++ + P
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK-CTP 725
Query: 331 SHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELY 390
+ V Y LI L + + N + +M + P ++ ++ K G A L+
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 391 SSRSQFGLSPNHMAYKYLI 409
G P+ Y +I
Sbjct: 786 DRFKANGGVPDSACYNAMI 804
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 118/311 (37%), Gaps = 4/311 (1%)
Query: 100 GDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRF 159
G + LK F+ + N + T+ + +L RA + + + VR
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
+ +V + K D A +F +M ++ D + L++ L + +A+ V +
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+ + +IK+ GR E+ ++ +N + + + E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+ + E P +Y + I GL++ G +E E F ++ +G V YN +
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE-QGCVLDTRAYNIV 593
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + ++N Y LL +M P +VT +V+ K+ D A L+ +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 399 SPNHMAYKYLI 409
N + Y LI
Sbjct: 654 ELNVVIYSSLI 664
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
V+++R+F +F +AY I D L F+Q ++ GY P+ + TLI
Sbjct: 156 VQMMRKFKFRPAF---SAYTTLIGAFSAVNHSDMMLTLFQQMQEL-GYEPTVHLFTTLIR 211
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+E R++ LL +M + D+V N + F K+G D+A + + GL P
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 401 NHMAYKYLILTLC 413
+ + Y +I LC
Sbjct: 272 DEVTYTSMIGVLC 284
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 2/289 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
+ I L ++K LD L + + + V +++L+ G +G+ A + M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 185 FQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLE 243
+ + D F ++ L+++ V E A + IRR VT ++I LC RL+
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E E +V G + L+ C S + E ++L E G Y + I
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
+G R G+L+ A E FR+ G P+ + YN L+ L ++ +L DM +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
D+VT N ++ CK G A ++Y S + GL P+ Y ++L L
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 8/301 (2%)
Query: 120 HTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHL 179
H T + R L L FL K + + +L+ G+ + AL++
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 180 FGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHV-TNVIVIKHLC 237
F +M G + Y+ +++ L + NA D++ N++ + G V T +I LC
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL-NRMEKDGIGPDVVTYNSLISGLC 232
Query: 238 KQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPL 295
GR + ++ + + +E++ F L+ R A E E P
Sbjct: 233 SSGRWSDATRMVSCM--TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 296 ENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
Y L I GL RLDEA E F S+G P V Y+ LI + ++ L
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 356 MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWD 415
+M++ + + VT ++ +C+ G +VA E++ G+ PN + Y L+ LC +
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 416 G 416
G
Sbjct: 410 G 410
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 138/317 (43%), Gaps = 10/317 (3%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVV 165
LKFF WA RQ R+ H + ++ +LS+ KL L R + ++V
Sbjct: 191 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES 225
Y+ AG+ AL + M+ G++ + + ++ V N + + R
Sbjct: 251 SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR---ANRLEKALRFLERMQVVG 307
Query: 226 HVTNVI----VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
V NV+ +I+ C R+EE L + G ++G LC R
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVR 367
Query: 282 ELVREFGTS-GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+L+++ G P + Y I L + DEAL F + ++ +G+ + Y+ ++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE-KGFRIDKLGYSAIVH 426
Query: 341 RLLRENRLNDVYYLLMDM-NETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
L +E R+++ L+ +M ++ PD+VT AV+ FC+LG D A +L G
Sbjct: 427 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 400 PNHMAYKYLILTLCWDG 416
PN ++Y L+ +C G
Sbjct: 487 PNTVSYTALLNGMCRTG 503
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 125/320 (39%), Gaps = 43/320 (13%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRK-FSRGRVTHKVRFHDTLVVG 166
+F ++ F + ++AI L + D + + S+G V + +V G
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 463
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV---------------EDNYQN-- 209
+ G+ D A L M G + Y LLN + E+++ +
Sbjct: 464 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 210 --AFDVIANQIRRKGYESHVTNVI-----------------VIKHLCKQGRLEEVEAYLN 250
+ VI + +RR+G S +V+ +++ LC+ GR E ++
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 583
Query: 251 GLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGG 310
+ G ++ ++ C ++ + A+ ++ + Y + L + G
Sbjct: 584 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG 643
Query: 311 RLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDM--NETC-TLPDM 367
R+ EA E + K +G P+ V Y T+I R + +++D+ +L M + C T+ +
Sbjct: 644 RIAEATELMK-KMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQ 702
Query: 368 VTMNAVLCFFCKLGMADVAL 387
V LC KL AD L
Sbjct: 703 VIEK--LCVLGKLEEADTLL 720
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 2/295 (0%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
+ AI L + K DF ++ R + V + LV G + + A L
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 183 MRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M + + + Y LL++ V++ A ++ +R VT +I LC R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
++E + +V G N L+ C + R E ++L RE G Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I+G + G +D+A EFF Q D G P YN L+ L L + DM +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
D+VT V+ CK G + A L+ S S GL P+ + Y ++ LC G
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 4/257 (1%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIANQIRR 220
+LV G+ + A+ L KM G D Y+ +++SL + N AFD +I R
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF-KEIER 218
Query: 221 KGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
KG +V T ++ LC R + L+ ++ + + L+ + +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A EL E P Y I GL R+DEA + F S+G + V YNTLI
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLI 337
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ R+ D L +M++ + + VT N ++ F + G D A E +S FG+S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 400 PNHMAYKYLILTLCWDG 416
P+ Y L+ LC +G
Sbjct: 398 PDIWTYNILLGGLCDNG 414
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
IVI C ++ + L ++ G E + LV C NR AV LV +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G P AY I L + R+++A +FF++ + +G P+ V Y L+ L +R +D
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
LL DM + P+++T +A+L F K G A EL+ + + P+ + Y LI
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 411 TLC 413
LC
Sbjct: 304 GLC 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 132 LSRAKLRPLIL----DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQG 187
LS+ +LR + L D + R + + L+ K D+ + L KM G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 188 LDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVE 246
+ D + +++++N + I ++ + GYE VT ++ C++ R+ +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
+ ++ +V G + N ++ LC + R A + +E G P Y + GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 307 -----------------------------------VRGGRLDEALEFFRQKRDSEGYVPS 331
V+ G++ EA E F + P
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPD 294
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
V Y++LI L +R+++ + M L D+V+ N ++ FCK + ++L+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 392 SRSQFGLSPNHMAYKYLI 409
SQ GL N + Y LI
Sbjct: 355 EMSQRGLVSNTVTYNTLI 372
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 6/294 (2%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F+ +F +++R K L+LD ++ + H + ++ K +A GK+
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 185 FQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLE 243
G + D + L+N L +E A +++ + + +T ++ LC G++
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 244 EVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
+ ++ +V +G +EV + ++ V+C S + A+EL+R+ Y +
Sbjct: 195 DAVLLIDRMVETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I GL + G LD A F + + +G+ + Y TLI R +D LL DM +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNE-MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWD 415
PD+V +A++ F K G A EL+ Q G+SP+ + Y LI C +
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 2/297 (0%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F T+ + +++ ++ L ++ LRK ++ + ++ G G D A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
+LF +M +G D Y L+ + + ++ + I+RK V +I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
K+G+L E E ++ G L+ C N+ ++A ++ + G P
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
+ + I G + +D+ LE FR K G V V YNTLI +L L
Sbjct: 388 RTFNILINGYCKANLIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+M PD+V+ +L C G + ALE++ + + + Y +I +C
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVT 228
+G+ +A+ L KM + + LD Y ++++ L +D + NAF++ N++ KG+++ +
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF-NEMEIKGFKADII 283
Query: 229 -NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
+I+ C GR ++ L ++ + L+ + A EL +E
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G P Y I G + +LD+A S+G P+ +N LI + N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
++D L M+ + D VT N ++ FC+LG +VA EL+ + P+ ++YK
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 408 LILTLCWDGCPS 419
L+ LC +G P
Sbjct: 463 LLDGLCDNGEPE 474
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIA 215
+R + L+ GY A D L LF KM +G+ D Y+ L+ E + A ++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ R+ V+ I++ LC G E+ + S EL N ++ +C+++
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ + A +L G P Y + I GL + G L EA FR K + +G+ P+ Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR-KMEEDGHSPNGCTY 565
Query: 336 NTLI 339
N LI
Sbjct: 566 NILI 569
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 206 NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN 265
++ F V+A R K Y+ ++ LCKQ L+ + L L +
Sbjct: 74 DFSRLFSVVA---RTKQYD-------LVLDLCKQMELKGIAHNLYTL------------S 111
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
++ C + A + + G P + I GL GR+ EALE + +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G+ P+ + N L+ L +++D L+ M ET P+ VT VL CK G +
Sbjct: 172 -GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPSGPF 422
A+EL + + + + Y +I LC DG F
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 106/268 (39%), Gaps = 7/268 (2%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
+G+V+++ R +V K D A+ LF +M + L + + +
Sbjct: 35 KGKVSYRERLRSGIV-----DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD 89
Query: 210 AFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ Q+ KG ++ T I+I C+ +L + + ++ G E + L+
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
LC R A+ELV G P + GL G++ +A+ + ++ G+
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GF 208
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ V Y ++ + + + LL M E D V + ++ CK G D A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L++ G + + Y LI C+ G
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAG 296
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIK 234
A+ +F +M +G D + ++ L++ L E D ++A ++ + I + VT +I
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
++G ++E +N +V G L N L+ LC + ++A L + G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
+ + I GL R G ++EA+EF +++ G P V +N+LI L R R+ D +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEF-QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
+ PD VT N ++ + CK G A L + G PNH + L+ ++
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 7/284 (2%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L L+ L V + LV G+ GK D A ++ +M GL + G++ L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 200 NSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKE 258
++ +++ I ++ RKG + V T +I LC+ ++ L ++ G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 259 LHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEF 318
+ N L+ + A +LV E GS E Y I+GL R G +D+A
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 319 FRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
F +K +G+ PS++ N LI L R + + +M + PD+VT N+++ C
Sbjct: 587 F-EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 379 KLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC-----WDGC 417
+ G + L ++ G+ P+ + + L+ LC +D C
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 139 PLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVL 198
P ++ R+ R V ++L+ G + AL L M +G+ + Y+ L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 199 LNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGK 257
+N+ + + N++ +G +T +IK LC+ G +++ + ++ G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
N L+ LC S E AVE +E GS P + I GL R GR+++ L
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
FR K +EG P V +NTL+ L + + D LL + E +P+ T + +L
Sbjct: 656 MFR-KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 138/352 (39%), Gaps = 45/352 (12%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
++ + ++ F W G Q + H+ + + L I L + + K
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 161 DTLVVGYAIAGKPDIALHLFGKMR-FQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQI 218
+++ Y AG P L +MR + Y+V+L LV N ++ A +V + +
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSG---------------------- 256
RK + T +V+K C ++ + L + G
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 257 KELHGSEVNFLVGV-------------LCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
+ L E FL+G LC +R A ++V G P + YG +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 304 RGLVRGGRLDEALE-FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDM-NET 361
GL + GR+D A + F+R + P V +NTLI + RL+D +L DM
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPK------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+PD+ T N+++ + K G+ +ALE+ G PN +Y L+ C
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 97/249 (38%), Gaps = 5/249 (2%)
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIANQIRRKGYE 224
+ + D AL L M G + Y L++SL + N N A ++
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
T VI LCK R+ E +N ++ G +L+ LC R + A +L
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
P + I G V GRLD+A S G VP YN+LI +
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
E + +L DM P++ + ++ FCKLG D A + + S GL PN +
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 405 YKYLILTLC 413
+ LI C
Sbjct: 462 FNCLISAFC 470
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 20/332 (6%)
Query: 107 KFFDWAGRQ-PRFNHTRATFAAIFRILSRA----KLRPLILDFLRK--FSRGRVTHKV-- 157
+F D G P F HT + +A+ IL R+ + +L +R+ SR + + +
Sbjct: 97 RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDS 156
Query: 158 ---------RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
D L+ Y A K A F +R +G + + L+ SLV +
Sbjct: 157 TFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 209 NAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ +I R G +V + I++ LCK G++E+V +L+ + G N L
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ E A EL+ G P Y I GL + G+ + A E F + S G
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-G 335
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P Y +L+ ++ + + + DM +PD+V ++++ F + G D AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDGCPS 419
++S + GL P+++ Y LI C G S
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 17/340 (5%)
Query: 89 VLRVLSHGGGDGDILSCL-KFFDWAG--RQPRFNHTRATFA------AIFRILSRA---- 135
++ +L G D SCL + +G R N +TF+ ++F +L R
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 136 -KLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFG 194
KLR F S+G T + + L+ G ++A ++ ++ G+ ++ +
Sbjct: 179 RKLREAHEAFTLLRSKG-FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 195 YHVLLNSLVEDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLV 253
++++N+L +D +Q++ KG Y VT +I +G +EE +N +
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 254 GSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLD 313
G G N ++ LC ++ERA E+ E SG P Y + + G +
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 314 EALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
E + F R S VP V +++++ R L+ + E +PD V +
Sbjct: 358 ETEKVFSDMR-SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 374 LCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ +C+ GM VA+ L + Q G + + + Y ++ LC
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 39/289 (13%)
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
+ L+ GY G +A++L +M QG +D Y+ +L+ L + D + N++
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 219 RRKG-YESHVTNVIVIKHLCKQGRLE----------------EVEAY---LNGL-----V 253
+ + T I+I CK G L+ +V Y L+G +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 254 GSGKELHGSEVN-----------FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLW 302
+ KE+ V+ LV LC A + E + P
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 303 IRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET- 361
I+G R G + E F +K SEG+VP + YNTLI +RE ++ + L+ M E
Sbjct: 592 IKGYCRSGNASDG-ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 362 -CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+PD+ T N++L FC+ A + + G++P+ Y +I
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 6/269 (2%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
FL + V + ++TL+ Y+ G + A L M +G + Y+ ++N L
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 204 E-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ Y+ A +V A +R T ++ CK+G + E E + + +++
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM--RSRDVVPD 374
Query: 263 EVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
V F ++ + S ++A+ +G P Y + I+G R G + A+ R
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL-R 433
Query: 321 QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKL 380
+ +G V YNT++ L + L + L +M E PD T+ ++ CKL
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 381 GMADVALELYSSRSQFGLSPNHMAYKYLI 409
G A+EL+ + + + + Y L+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 152 RVTHKVRFHDT-----LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-D 205
+T + F D+ L+ G+ G A+ LF KM+ + + LD Y+ LL+ +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 206 NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN 265
+ A ++ A+ + ++ + ++ I++ LC +G L E + ++ + N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
++ C S + + + G P +Y I G VR + +A ++ +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 326 EG-YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+G VP YN+++ R+N++ + +L M E PD T ++ F
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 385 VALELYSSRSQFGLSPN 401
A ++ Q G SP+
Sbjct: 710 EAFRIHDEMLQRGFSPD 726
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 158 RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIAN 216
R + L+ G G ++ KM+ G+ + + Y+ ++N L +D ++AF V +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF-D 292
Query: 217 QIRRKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
++R +G + VT +I LC++ +L E ++ + G + N L+ C
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ +A+ L R+ + G P Y + + G R G A + ++ + G PS V Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTY 411
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
LI R + + L + M E +PD+ T + ++ FC G + A L+ S +
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 396 FGLSPNHMAYKYLILTLCWDG 416
PN + Y +IL C +G
Sbjct: 472 KNCEPNEVIYNTMILGYCKEG 492
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTN 229
G+ A +F +MR +G+ + Y+ L+ L + N + + +Q++ G + +T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
+I C G+L + + L G N LV C A ++V+E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P + Y + I R +++A++ R + G VP Y+ LI + ++N
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L M E P+ V N ++ +CK G + AL+L + L+PN +Y+Y+I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 410 LTLCWD 415
LC +
Sbjct: 521 EVLCKE 526
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 2/275 (0%)
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
D L + + + V + TL+ G G+ + A LF +M GL + Y VL+N L
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 203 VEDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
++ + + +++ G + + T V+ LCK GR ++ + + G +
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
N L+G LC + A ++V + + G P Y I G G+L +AL R
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ S G PS V YN L+ R+ + ++ +M E P VT ++ F +
Sbjct: 364 LK-SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ A++L S + GL P+ Y LI C G
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 190 LDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVT-NVIVIKHLCKQGRLEEVEA 247
LD + + +L+ E + +FD++ ++ G+ +V +I CK+G +E+ +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLI-ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 248 YLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLV 307
+ G + L+ L + ++ E+ + G FP Y + L
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 308 RGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDM 367
+ GR +A + F + R+ G + V YNTLI L RE +LN+ ++ M P++
Sbjct: 280 KDGRTKDAFQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 368 VTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPSG 420
+T N ++ FC +G AL L GLSP+ + Y L+ C G SG
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 9/328 (2%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRK 147
V VL+ G G+ + + FFDWA R+P +++ I R L R KL ++D L+
Sbjct: 119 IVADVLNRGNLSGEAM--VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKG 176
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
V + + + A+ LF + G+ ++ LL L E ++
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH 236
Query: 208 QNAFDVIANQIRRKG---YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV 264
+A + N +KG ++S N I+I K G +EE+E L +V SG
Sbjct: 237 VSAAKSVFNA--KKGNIPFDSCSYN-IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
+ L+ L + R +VE+ G+ P N Y I + DE++ ++R+ D
Sbjct: 294 SHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
E P+ Y+ L+ L++ +++D + +M LP + + L C G
Sbjct: 354 EECE-PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTL 412
A+ +Y + G + AYK L+ L
Sbjct: 413 AAMVIYQKSRKAGCRISESAYKLLLKRL 440
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
A +V+ + Y VT ++ + C++G LEEV + + ++ G EL+ N L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
LC ++ E++ + P Y + I GL + L A++FF Q + + +
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK-CL 381
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P V YNT++ + +E ++D LL + TC P ++T N+V+ K G+ ALEL
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 390 YSSRSQFGLSPNHMAYKYLILTLC 413
Y G+ P+ + + LI C
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFC 465
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVP 330
LC + + A +LV P + +RGL R +LD+A+ R S G VP
Sbjct: 114 LCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG-VP 172
Query: 331 SHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL-CFFCKLGMADVALEL 389
+ YN +I L ++ + LL DM+ + + PD++T N V+ C F G A+ A+
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF-DYGNAEQAIRF 231
Query: 390 YSSRSQFGLSPNHMAYKYLILTLC 413
+ + Q G P + Y L+ +C
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVC 255
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+++ L + +L++ L +V SG N ++G LC A+ L+ + SG
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT---LICRLLRENRL 348
S P Y IR + G ++A+ F++ + + G P + Y L+CR R
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARA 263
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
+V L DM PD+VT N+++ + C+ G + + GL N + Y L
Sbjct: 264 IEV---LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 409 ILTLC----WD 415
+ +LC WD
Sbjct: 321 LHSLCSHEYWD 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 1/203 (0%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPD 174
Q + T T+ + L +A+L +DF + + + ++T++ + G D
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG-YESHVTNVIVI 233
A+ L G ++ Y+ +++ L + + +Q+ G + +T +I
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
C+ +EE L G + GS ++ LC E A+E+V T G
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521
Query: 294 PLENAYGLWIRGLVRGGRLDEAL 316
P E Y ++G+ G EA+
Sbjct: 522 PDETIYTAIVKGVEEMGMGSEAV 544
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 2/255 (0%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG 222
LV G A + D A+ + M G D Y++++ +L + + V+ + G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 223 YESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
V T VI+ + G E+ + + +G LV ++C RA+
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
E++ + G +P Y + R G L+E Q S G + V YNTL+
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVI-QHILSHGLELNTVTYNTLLHS 323
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
L ++V +L M +T P ++T N ++ CK + A++ + + P+
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 402 HMAYKYLILTLCWDG 416
+ Y ++ + +G
Sbjct: 384 IVTYNTVLGAMSKEG 398
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 9/307 (2%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ A+ L + L L+ L K +G++ V ++T++ G
Sbjct: 210 GCQPDL----VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D A LF KM +G+ D F Y+ L++ L + +A ++++ + + V
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV--NFLVGVLCDSNRFERAVELVREFGT 289
+I K+G+L E E + +V S K V N L+ C R E +E+ RE
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKS-KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G Y I G + D A F+Q S+G P + YN L+ L +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ M + D+VT ++ CK G + +L+ S S G+ PN + Y ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 410 LTLCWDG 416
C G
Sbjct: 504 SGFCRKG 510
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 9/294 (3%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F+ + +++ L++ + ++H + + + + + +AL + GKM
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLE 243
G + LLN N + + +Q+ GY+ VT ++ L + +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A + +V G + ++ LC + A+ L+ + Y I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
GL + +D+A + F K +++G P YN LI L R +D LL DM E
Sbjct: 258 DGLCKYKHMDDAFDLF-NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELY----SSRSQFGLSPNHMAYKYLILTLC 413
PD+V NA++ F K G A +LY S+ F P+ +AY LI C
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF---PDVVAYNTLIKGFC 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 1/256 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
TLV G K A+ L +M +G D Y ++N L + + + N++ +
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 222 GYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
E+ V +I LCK +++ N + G + N L+ LC+ R+ A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
L+ + P + I V+ G+L EA + + + S+ P V YNTLI
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+ R+ + + +M++ + + VT ++ F + D A ++ G+ P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 401 NHMAYKYLILTLCWDG 416
+ M Y L+ LC +G
Sbjct: 425 DIMTYNILLDGLCNNG 440
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 39/339 (11%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ A+ L + L L+ L K +G++ V + T++
Sbjct: 200 GCQPDL----VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ D F Y L++ L + +A ++++ + RK + VT
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+L E E + ++ + + N L+ C +R + A ++ +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFR----------------------QKRD----- 324
P Y I G + ++ + +E FR Q D
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 325 -------SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
S+G P+ + YNTL+ L + +L + + ++ PD+ T N +
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
CK G + +L+ S S G+ P+ +AY +I C G
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 2/291 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F+ + +++ K L++ F K V+H + ++ ++ + AL + GKM
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKH-LCKQGRLE 243
G + LLN N + + +Q+ GY+ + H L + +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A + +V G + ++ LC + A+ L+ + Y I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L + +D+AL F + D++G P Y++LI L R +D LL DM E
Sbjct: 248 DSLCKYRHVDDALNLFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
P++VT N+++ F K G A +L+ Q + PN + Y LI C
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 1/229 (0%)
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE 244
F GL DG+ + N+L+ A D+ ++ + + S V ++ + K + +
Sbjct: 24 FSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 245 VEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIR 304
V ++ + G + N ++ LC ++ A+ ++ + G P +
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN 143
Query: 305 GLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTL 364
G G R+ EA+ Q + GY P V + TL+ L + N+ ++ L+ M
Sbjct: 144 GFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 365 PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
PD+VT AV+ CK G D+AL L + + + + + Y +I +LC
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+D + + R + L+ A K D+ + KM G+ + + Y++++N
Sbjct: 50 VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109
Query: 202 LVEDNYQNAFDVIANQIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
L + + I ++ + GY S VT ++ C R+ E A ++ +V G +
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
LV L N+ AV LV G P YG I GL + G D AL
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 321 QKRDSEGYVPSHVR-YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
+ +G + + V Y+T+I L + ++D L +M+ PD+ T ++++ C
Sbjct: 230 KME--KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G A L S + ++PN + + LI +G
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 2/254 (0%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIA 215
VR + L+ G GKP A+HL +M GL D Y+VL++ L + + N A+ +++
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ +T +I CKQG+ + A+L ++ G L L+ +C
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ A+ ++ ++ + + L +G ++ E L K + G VPS V Y
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML-GKINKLGLVPSVVTY 584
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
TL+ L+R + + +L M + LP++ ++ C+ G + A +L S+
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Query: 396 FGLSPNHMAYKYLI 409
G+SPNH+ Y ++
Sbjct: 645 SGVSPNHVTYTVMV 658
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 157/387 (40%), Gaps = 66/387 (17%)
Query: 91 RVLSHGGGDGDILSCLKFFDWAGRQPR--FNHTR------------------ATFAAIFR 130
+V+S D DI C++FF W + F+ T+ A A+ +
Sbjct: 74 QVISLQRSDNDI--CVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIK 131
Query: 131 ILSRAKLRPLIL----DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQ 186
SR + L L D LR+ R+ + + +L++ A +A + +M
Sbjct: 132 ECSRCEKEMLKLMYCFDELREVFGFRLNYPC--YSSLLMSLAKLDLGFLAYVTYRRMEAD 189
Query: 187 GLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY--ESH------------------ 226
G + Y ++N+L ++ Y A ++ ++I + G+ +SH
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 227 -----------------VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
V+ I+I LC+ GRLEE + + G + L+
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
LCD ++A L E G P + Y + I GL R G+++EA R K +
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR-KMVKDRIF 368
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
PS + YN LI ++ R+ + LL M + P++ T N ++ C++G A+ L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 390 YSSRSQFGLSPNHMAYKYLILTLCWDG 416
GLSP+ ++Y LI LC +G
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREG 455
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 2/258 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQI 218
+ L+ G G+ + A L +M +G Y VL+ +L + AF++ I
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R + T ++I LC+ G++EE +V N L+ C R
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A EL+ P + + GL R G+ +A+ ++ D+ G P V YN L
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVL 447
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I L RE +N Y LL MN PD +T A++ FCK G ADVA + G+
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 399 SPNHMAYKYLILTLCWDG 416
S + + LI +C G
Sbjct: 508 SLDEVTGTTLIDGVCKVG 525
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 139/340 (40%), Gaps = 41/340 (12%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L + L K +G++ V ++T++ G
Sbjct: 216 GCQPDL----VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ + Y L++ L + +A ++++ I RK T
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 232 VIKHLCKQGRLEEVE-------------------AYLNGL-----VGSGKELHGSEV--- 264
+I K+G+L E E + +NG + K++ V
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 265 --------NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEAL 316
N L+ C R E +E+ RE G Y + I+GL + G D A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 317 EFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCF 376
E F++ S+G P+ + YNTL+ L + +L + + + P + T N ++
Sbjct: 452 EIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 377 FCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
CK G + +L+ + S G+ P+ +AY +I C G
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 7/272 (2%)
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
F G + V F+ TL+ G + K A+ L +M +G D Y V++N L +
Sbjct: 178 FVTGYQPNTVTFN-TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 208 QN-AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ AF+++ + K + +I LCK +++ + G + +
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRD 324
L+ LC+ R+ A L+ + P + I V+ G+L EA + + + KR
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+ PS V Y++LI +RL++ + M PD+VT N ++ FCK +
Sbjct: 357 ID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+E++ SQ GL N + Y LI L G
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 129/322 (40%), Gaps = 41/322 (12%)
Query: 132 LSRAKLRPLILD----FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQG 187
LSR L L LD + + R + L+ A K D+ + L +M+ G
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 188 LDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVI-VIKHLCKQGRLEEVE 246
+ + + Y +L+N + + ++ + GYE ++ + ++ C R+ E
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
A ++ + +G + + N L+ L N+ A+ L+ G P YG+ + GL
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 307 VRGG-----------------------------------RLDEALEFFRQKRDSEGYVPS 331
+ G +D+AL F++ +++G P+
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE-METKGIRPN 290
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
V Y++LI L R +D LL DM E PD+ T +A++ F K G A +LY
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 392 SRSQFGLSPNHMAYKYLILTLC 413
+ + P+ + Y LI C
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFC 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ G+ + + + +F +M +GL + Y++L+ L + + I ++
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G ++ T ++ LCK G+LE+ L S E N ++ +C + + E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+L G P AY I G R G +EA F++ ++ +G +P+ YNTL
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTL 577
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
I LR+ L+ +M D T+ V
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 2/216 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
+ +L+ G+ + + D A +F M + D Y+ L+ + + +V
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+R + VT I+I+ L + G + + +V G + N L+ LC + + E
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+A+ + S P Y + I G+ + G++++ + F +G P V YNT+
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF-CNLSLKGVKPDVVAYNTM 542
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
I R+ + L +M E TLP+ N ++
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 132/326 (40%), Gaps = 34/326 (10%)
Query: 91 RVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSR 150
RV D L + FD+A +QP F H+R++ + L R + LI D L K
Sbjct: 53 RVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRS 112
Query: 151 GRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNA 210
L+ YA A P+ L F KM L+ + LN ++
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM----LEFNFTPQPKHLNRIL------- 161
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
DV+ + +GY + L G + +Y N L+
Sbjct: 162 -DVL---VSHRGYLQKAFELFKSSRL--HGVMPNTRSY----------------NLLMQA 199
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVP 330
C ++ A +L + P ++Y + I+G R G+++ A+E + +G+VP
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN-KGFVP 258
Query: 331 SHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELY 390
+ Y TL+ L R+ +L + Y LL M PD+V N ++ FC+ A A ++
Sbjct: 259 DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVL 318
Query: 391 SSRSQFGLSPNHMAYKYLILTLCWDG 416
G SPN ++Y+ LI LC G
Sbjct: 319 DDMLSNGCSPNSVSYRTLIGGLCDQG 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAF 211
V V + L+ G+ G+ + A+ L M +G D Y LLNSL + + A+
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 212 DVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
++ +++ KG + + +I C++ R + L+ ++ +G + L+G
Sbjct: 281 KLLC-RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
LCD F+ + + E + G P + ++G G+++EA +
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACD 386
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 2/230 (0%)
Query: 191 DGFGYHVLLNSLVEDNYQN-AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYL 249
+G +++++ +L + + + A +V RK T ++ LCK+ R++E L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 250 NGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG 309
+ + G N L+ LC R +LV G P E Y I GL
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 310 GRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVT 369
G+LD+A+ ++ S +P+ V Y TLI L+++ R D LL M E +
Sbjct: 306 GKLDKAVSLL-ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 370 MNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPS 419
+ ++ K G A+ A+ L+ ++ G PN + Y L+ LC +G P+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIV 232
D A+ +F M + DG+ Y L++ L ++ + ++ ++++ +G S V ++
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 233 IKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGS 292
I LCK+G L V ++ + G + N L+ LC + ++AV L+ +S
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 293 FPLENAYGLWIRGLVRG-----------------------------------GRLDEALE 317
P + YG I GLV+ G+ +EA+
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+R K +G P+ V Y+ L+ L RE + N+ +L M + LP+ T ++++ F
Sbjct: 384 LWR-KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
K G+ + A++++ + G S N Y LI LC G
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 8/271 (2%)
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
F +G V ++V ++ TL+ G + GK D A+ L +M + Y L+N LV+
Sbjct: 284 FLKGCVPNEVTYN-TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 208 QNAFDVIANQIRRKGY--ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN 265
+ + + +GY H+ +V+ I L K+G+ EE + + G + + +
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVL-ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
LV LC + A E++ SG P Y ++G + G +EA++ +++ D
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE-MDK 460
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G + Y+ LI L R+ + + M PD V ++++ C +G D
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 386 ALELYSS---RSQFGLSPNHMAYKYLILTLC 413
AL+LY + + P+ + Y L+ LC
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 146/350 (41%), Gaps = 40/350 (11%)
Query: 106 LKFFDW---AGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDT 162
L+F+D+ + + +F + + L + + ++ R + + T
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRK 221
L+ G + D A+ L +M+ +G Y+VL++ L + + ++ N +
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 222 GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
+ VT +I LC +G+L++ + L +V S + L+ L R AV
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
L+ G ++ Y + I GL + G+ +EA+ +R K +G P+ V Y+ L+
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR-KMAEKGCKPNIVVYSVLVDG 406
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS-------SRS 394
L RE + N+ +L M + LP+ T ++++ F K G+ + A++++ SR+
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 395 QF----------------------------GLSPNHMAYKYLILTLCWDG 416
+F G+ P+ +AY +I LC G
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 22/284 (7%)
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGK---PDIALHLFGKMRFQGLDLDGF-------GYHV 197
SR R+ ++V + +V + GK PD A+ LF +M +D F ++
Sbjct: 100 LSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM------VDEFRCKRSVKSFNS 153
Query: 198 LLNSLVEDN-YQNAFD----VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGL 252
+LN ++ + Y + V+ + + + ++ +VIK LCK ++ G+
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 253 VGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
G L+ LC R + AV L+ E + G P Y + I GL + G L
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNA 372
+ +G VP+ V YNTLI L + +L+ LL M + +P+ VT
Sbjct: 274 TRVTKLV-DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ K A A+ L SS + G N Y LI L +G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
+ L+ G GK + A+ L+ KM +G + Y VL++ L + N I N++
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 219 RRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
G + T ++K K G EE + +G + + L+ LC R
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK--RDSEGYVPSHVRY 335
+ A+ + + T G P AY I+GL G +D AL+ + + ++ P V Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
N L+ L + ++ LL M + PD++T N L
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 8/315 (2%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVG 166
KF G QP+ T+ + L A + + D + V ++ L+
Sbjct: 774 KFTKDLGVQPKL----PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYE- 224
Y +GK D L+ +M + + ++++++ LV+ N +A D+ + + + +
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+ T +I L K GRL E + G++ G + + N L+ + + A L
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+ G P Y + + L GR+DE L +F++ ++S G P V YN +I L +
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGK 1008
Query: 345 ENRLNDVYYLLMDMNETCTL-PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+RL + L +M + + PD+ T N+++ GM + A ++Y+ + GL PN
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 404 AYKYLILTLCWDGCP 418
+ LI G P
Sbjct: 1069 TFNALIRGYSLSGKP 1083
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 12/263 (4%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIA---- 215
++TL+ G + D AL LFG M G+ + Y V + D Y + D ++
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI-----DYYGKSGDSVSALET 455
Query: 216 -NQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCD 273
+++ KG ++ + L K GR E + GL G N ++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
+ A++L+ E +G P I L + R+DEA + F + ++ + P+ V
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVV 574
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSR 393
YNTL+ L + ++ + L M + P+ +T N + CK +AL++
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 394 SQFGLSPNHMAYKYLILTLCWDG 416
G P+ Y +I L +G
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNG 657
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 4/272 (1%)
Query: 93 LSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGR 152
+ + G GD +S L+ F+ + + A A+++ + + R F G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAF 211
V V ++ ++ Y+ G+ D A+ L +M G + D + L+N+L + D A+
Sbjct: 500 VPDSVTYN-MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 212 DVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
+ K + VT ++ L K G+++E G+V G + N L L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
C ++ A++++ + G P Y I GLV+ G++ EA+ FF Q + + P
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK--KLVYPD 676
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
V TL+ +++ + + D Y ++ + C
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 132/350 (37%), Gaps = 39/350 (11%)
Query: 102 ILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHD 161
++ LK + G +P TF R+L RA + L++ V +
Sbjct: 242 VMGLLKEMETLGLKPNV----YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
L+ A K D A +F KM+ D Y LL+ ++ ++ +++ +
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 222 GYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
G+ V T I++ LCK G E L+ + G + N L+ L +R + A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF--------------------- 319
+EL + G P Y ++I + G ALE F
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 320 --RQKRDSE-----------GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPD 366
+ RD E G VP V YN ++ + +++ LL +M E PD
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 367 MVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ +N+++ K D A +++ + L P + Y L+ L +G
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 134/333 (40%), Gaps = 14/333 (4%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPR---FNHTRATFAAIFRILSRAKLRPLILDFL 145
+ + LS GG LK +A R+ R F ++ + +L +++ ++
Sbjct: 159 IFKSLSVKGG-------LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED 205
R+ ++ + +L+VG D + L +M GL + + + + + L
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 206 NYQN-AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLE-EVEAYLNGLVGSGKELHGSE 263
N A++++ VT ++I LC +L+ E + G K +
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
+ L+ D+ + + E G P + + + L + G EA + R
Sbjct: 332 IT-LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
D +G +P+ YNTLIC LLR +RL+D L +M P T + ++ K G +
Sbjct: 391 D-QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
ALE + G++PN +A + +L G
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 2/222 (0%)
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG-YES 225
Y +G AL F KM+ +G+ + + L SL + I ++ G
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
VT +++K K G ++E L+ ++ +G E VN L+ L ++R + A ++
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
P Y + GL + G++ EA+E F + +G P+ + +NTL L +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF-EGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
+ + +L M + +PD+ T N ++ K G A+
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 134/344 (38%), Gaps = 38/344 (11%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVV 165
++FF+W ++ F+H + + I A+ ++ + + + + +R L+
Sbjct: 173 MRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILIS 232
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL----------------VED---- 205
Y A K L +F KMR G +LD Y++++ SL +E
Sbjct: 233 VYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITF 292
Query: 206 ---NYQNAFDVIANQIRRKGYESHVTNVI-------------VIKHLCKQGRLEEVEAYL 249
Y+ D IA + +S +++ ++K C G+++E +
Sbjct: 293 GLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 250 NGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG 309
L L LV LC +NR A+E+V + N YG+ I G +R
Sbjct: 353 RELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQ 411
Query: 310 GRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVT 369
+ +ALE F + S G P Y ++ L + + L +M E PD V
Sbjct: 412 NDVSKALEQFEVIKKS-GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 370 MNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ AV+ A +++SS + G+ P +Y + LC
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 143/345 (41%), Gaps = 28/345 (8%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAK----LRPLILD 143
V+ VL H G+ + L+FF W G++ + H + ++ K +R L +
Sbjct: 646 LVVEVLRHAKIQGN--AVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYE 703
Query: 144 FLRKFSRGRVTHKVRFHDT---LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
R+ + DT +++ Y G +IA+ F +M+ GL + L+
Sbjct: 704 MRRQGC-------LITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLIT 756
Query: 201 SLVEDNYQNAFDVIAN--QIRRKGYESHVTNVIVIKH----LCKQGRLEEVEAYLNGLVG 254
L E +N + ++ R G+ V + +++ LC+ G ++ ++ L+ L
Sbjct: 757 VLCEKKGRNVEEATRTFREMIRSGF---VPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 255 SGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDE 314
G + + + + LC + E A+ + F S + YG + GL++ G L +
Sbjct: 814 IGFPVTVA-YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 315 ALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
AL+ ++ G P Y +LI +E +L V M P +VT A++
Sbjct: 873 ALDKVNSMKEI-GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 375 CFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPS 419
C + LG + A + + + G SP+ Y I LC C S
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC-QACKS 975
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 22/333 (6%)
Query: 105 CLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVR--FH-- 160
CL+++ W + + + + L+ AK I FL F R H+V FH
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 161 -------------DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
D LV+ YA + ++ F + + G L L+ +L+++N
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 208 QNAFD-VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ V IRRK + T +VI LCK G++ + + + G + N
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 267 LVGVLCD---SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
L+ C + + +A +++E + P + + I G + L +++ F++
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
D + P+ + YN+LI L ++++ + M P+++T NA++ FCK M
Sbjct: 324 DQD-VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
AL+++ S G P Y LI C G
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 6/297 (2%)
Query: 124 TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAI---AGKPDIALHLF 180
TF + L + D + + V ++TL+ GY GK A +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 181 GKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQ 239
+M + + +++L++ +DN + V + + + ++ +I LC
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 240 GRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAY 299
G++ E + + +V +G + + N L+ C ++ + A+++ G+ P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
+ I + G++D+ +++ + EG VP YN LI L R + + L D
Sbjct: 405 NMLIDAYCKLGKIDDGFAL-KEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKKLFDQL 462
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ LPD+VT + ++ +C+ G + A L S+ GL P H+ Y ++ C +G
Sbjct: 463 TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 37/313 (11%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L L L+K +G++ V + T++ + AL+LF +M +G+ + Y+ L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 200 NSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVE------------ 246
L + +A ++++ I RK + VT +I K+G+L E E
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 247 -------AYLNGLVGSGK--------ELHGSE--------VNFLVGVLCDSNRFERAVEL 283
+ +NG + EL S+ N L+ C + R E +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
RE G Y I+GL + G D A + F+ K S+G P + Y+ L+ L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK-KMVSDGVPPDIITYSILLDGLC 476
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+ +L + + ++ PD+ T N ++ CK G + +L+ S S G+ PN +
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 404 AYKYLILTLCWDG 416
Y +I C G
Sbjct: 537 IYTTMISGFCRKG 549
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 16/273 (5%)
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNA 210
++ V L+ + GK A L+ +M + +D D F Y L+N + D A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE-----VEAYLNGLVGSGKELHGSEVN 265
+ I + + + VT +IK CK R+EE E GLVG + N
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-----NTVTYN 434
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR--QKR 323
L+ L + + A ++ ++ + G P Y + + GL + G+L++AL F QK
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
E P YN +I + + ++ D + L ++ P+++ ++ FC+ G+
Sbjct: 495 KME---PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ A L+ + G PN Y LI DG
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 4/277 (1%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+D + + R + + L+ A K D+ + L +M+ + D + Y++L+N
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 202 LVEDNYQNAFDVIANQIRRKGYESHVTNVI-VIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
+ + ++ + GYE + + ++ C R+ E A ++ + + +
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
N L+ L N+ AV L+ G P YG + GL + G +D AL
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL- 243
Query: 321 QKRDSEGYVPSHVR-YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
K+ +G + + V Y T+I L +ND L +M+ P++VT N+++ C
Sbjct: 244 -KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G A L S + ++PN + + LI +G
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 10/220 (4%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ G+ A + + + LF +M +GL G V N+L++ +Q +A +I
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGL----VGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 220 RKGYESHV-----TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDS 274
+K V T I++ LCK G+LE+ L S E N ++ +C +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 275 NRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR 334
+ E +L G P Y I G R G +EA FR+ ++ +G +P+
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DGTLPNSGT 572
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
YNTLI LR+ L+ +M + D T++ V+
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 5/232 (2%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFS-RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
T+ + + +AK ++ R+ S RG V + V ++ TL+ G AG D+A +F
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN-TLIQGLFQAGDCDMAQKIFK 454
Query: 182 KMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQG 240
KM G+ D Y +LL+ L + V+ +++ E + T I+I+ +CK G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 241 RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYG 300
++E+ L G + + ++ C E A L RE G+ P Y
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 301 LWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
IR +R G + E ++ R S G+V +++ +L + RL Y
Sbjct: 575 TLIRARLRDGDKAASAELIKEMR-SCGFV-GDASTISMVINMLHDGRLEKSY 624
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 2/301 (0%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPD 174
Q R + F + +++ L++ + R+++ + ++ L+ + +
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVI 233
+AL + GKM G + D LLN + + +Q+ Y+ + VT +I
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
L + E A ++ +V G + +V LC + A+ L+++
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
Y I L +++AL F + D++G P+ V YN+LI L R +D
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
LL DM E P++VT +A++ F K G A +LY + + P+ Y LI C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 414 W 414
Sbjct: 372 M 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 12/248 (4%)
Query: 172 KPDIALHLFGKMRFQGLDLDGF-GYHVLLNSLVEDNYQNAFDVIAN-----QIRRKGYES 225
K D A+ LFG+M Q L ++ LL+++ + N FD++ + Q R Y+
Sbjct: 60 KLDDAVDLFGEM-VQSRPLPSIVEFNKLLSAIAK---MNKFDLVISLGERMQNLRISYDL 115
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
+ N I+I C++ +L A L ++ G E ++ L+ C R AV LV
Sbjct: 116 YSYN-ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
+ P + I GL + EA+ + + G P Y T++ L +
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI-DRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
++ LL M + D+V ++ C + AL L++ G+ PN + Y
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 406 KYLILTLC 413
LI LC
Sbjct: 294 NSLIRCLC 301
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 5/262 (1%)
Query: 151 GRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNA 210
GR+ + ++T++ GY AG+ A+ M +G + D Y ++ + D+ +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 211 FDVIANQIRRKGYE--SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ ++ KG + H + +VI LCK+G+L E ++ G + + + L+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFS-LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
S E A+ L+ G P Y + + GL + GR++EAL++F R +G
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR-FDGL 428
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
+ + Y++LI L + R+++ L +M+E D NA++ F K D A+
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 389 LYSSRSQFGLSPNHMAYKYLIL 410
L+ R + + Y Y IL
Sbjct: 489 LF-KRMEEEEGCDQTVYTYTIL 509
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 10/307 (3%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGY 167
FF W+ +Q ++ H + ++ +L+ AK I + + V + L+ +
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSF 197
Query: 168 AIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE----DNYQNAFDVI-ANQIRRKG 222
G + L ++ KM+ G++ + Y+ L+N LV D+ + F+V+ + +I+
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK--- 254
Query: 223 YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVE 282
VT +IK CK G+ ++ L + G E ++ + F V
Sbjct: 255 -PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 283 LVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRL 342
L +E G +A+ L I GL + G+L+E F + +G P+ Y LI
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF-ENMIRKGSKPNVAIYTVLIDGY 372
Query: 343 LRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
+ + D LL M + PD+VT + V+ CK G + AL+ + + GL+ N
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 403 MAYKYLI 409
M Y LI
Sbjct: 433 MFYSSLI 439
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 2/255 (0%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRK 221
++ G GK + +F M +G + Y VL++ + + ++A ++ I
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 222 GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
VT +V+ LCK GR+EE Y + G ++ + L+ L + R + A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
L E G Y I + ++DEA+ F++ + EG + Y L+
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
+ +E+R + L M + P A+ C G A ++ + G+ +
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 402 HMAYKYLILTLCWDG 416
A + +I TLC G
Sbjct: 573 A-ACEDMINTLCKAG 586
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
++++ K+ R+E V +V G N L+ LCDS+ + A EL E
Sbjct: 117 LLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK 176
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G P E +G+ +RG + G D+ LE +S G +P+ V YNT++ RE R +D
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELL-NAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSR---SQFGLS-PNHMAYK 406
++ M E +PD+VT N+ + CK G A ++S GL PN + Y
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYN 295
Query: 407 YLILTLCWDG 416
++ C G
Sbjct: 296 LMLKGFCKVG 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 29/292 (9%)
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY 207
R V + L+ GY GK D A L +M + + ++LL+SL +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 208 QNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ + + ++ KGY VT I++ LC G L++ + G+ G G+ N
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 267 LVGV-----------------------LCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
+G+ LC + RF A L E P AY ++I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 304 RGLVRGGRLDEALEFFRQKRDSE--GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
+ G++ A FR +D E G S YN+LI L +N++ +++ L+ +M E
Sbjct: 567 HHFCKQGKISSA---FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++ T N + + C+ + A L Q ++PN ++KYLI C
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 22/263 (8%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG 222
LV GY AG D L L M G+ + Y+ +++S + + + + ++R +G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 223 YESHVTNVIV----IKHLCKQGRL---------EEVEAYLNGLVGSGKELHGSEVNFLVG 269
V +++ I LCK+G++ E++ YL GL + N ++
Sbjct: 248 L---VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL-GL----PRPNSITYNLMLK 299
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
C E A L + +Y +W++GLVR G+ EA +Q D +G
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD-KGIG 358
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
PS YN L+ L + L+D ++ M PD VT +L +C +G D A L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 390 YSSRSQFGLSPNHMAYKYLILTL 412
+ PN L+ +L
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSL 441
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 31/290 (10%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGF-GYHVLLNSLVEDNYQNAFDVIANQI 218
++ ++ G+ G + A LF +R + DL Y++ L LV + + Q+
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIR-ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 219 RRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
KG + + I++ LCK G L + + + + +G L+ C +
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 278 ERAVELVREFGTSGSFPLENAY--GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ A L++E + P NAY + + L + GR+ EA E R K + +GY V
Sbjct: 413 DAAKSLLQEMMRNNCLP--NAYTCNILLHSLWKMGRISEAEELLR-KMNEKGYGLDTVTC 469
Query: 336 NTLICRLLRENRLNDVYYLLMDMN-----------------------ETCTLPDMVTMNA 372
N ++ L L+ ++ M E LPD++T +
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPSGPF 422
+L CK G A L++ L P+ +AY I C G S F
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 136/326 (41%), Gaps = 11/326 (3%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
VL+ LS+ G + L F WA Q F HT + + A+ L + K LI +
Sbjct: 100 VLKKLSNAG-----VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM 154
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
++ K F + YA A K A+ F KM G ++ ++ +L++L +
Sbjct: 155 KAKKLLSKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNV 213
Query: 209 NAFDVIANQIRRKGYESHVTN-VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ +++++K +E + + I+++ ++ L V+ + G E +
Sbjct: 214 GDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGII 273
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ C + ++E A+ E P + + I GL +L++ALEFF + + S G
Sbjct: 274 INAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS-G 332
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
+ YN L+ R+ D Y + +M P+ T + +L ++ + A
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLC 413
E+Y + S P Y+ ++ C
Sbjct: 393 EVYQTMS---CEPTVSTYEIMVRMFC 415
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 7/298 (2%)
Query: 124 TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKM 183
+ + + L +A + + L + + ++ ++ G G+ + +L L G+M
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 184 RFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVT-NVIVIKHLCKQGR 241
+ G++ F + + L E ++ A D++ ++R G+E + ++K LC+ GR
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLL-KKMRFYGFEPWIKHTTFLVKKLCENGR 559
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
+ YL+ + G G H + L + +R +EL R+ +G P AY +
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I+ L + R EA F + S+G P+ YN++I +E ++ ++ M E
Sbjct: 620 LIKALCKACRTMEADILFNEMV-SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC---WDG 416
PD++T +++ C G A+ ++ PN + + LI LC W G
Sbjct: 679 EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 22/282 (7%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAK----LRPLILDFLRK---FSRGRVTHKVRFH 160
FF+WA +Q + + + A+ ILSRA+ L+ L++D L S G +R
Sbjct: 92 FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCL 151
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDL-DGFGYHVLLNSLVEDNYQNAFDVIA--NQ 217
AG D A +F ++R GL + + + Y+ LL ++ + N + V A +
Sbjct: 152 GN-------AGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKE 204
Query: 218 IRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSG-KELHGSEVNFLVGVLCDSN 275
+R G+ T V++ C G+ E + N ++ G + H S + LV C
Sbjct: 205 MRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI--LVVSFCKWG 262
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ ++A EL+ Y + I G V+ R+D+A + F + R G Y
Sbjct: 263 QVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR-RMGMNADIALY 321
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+ LI L + L L +++ + PD + +LC F
Sbjct: 322 DVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSF 363
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 18/289 (6%)
Query: 127 AIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQ 186
A+F+ + R++ P ++DF R FS A + ++ L ++
Sbjct: 74 ALFQEMIRSRPLPSLVDFSRFFS----------------AIARTKQFNLVLDFCKQLELN 117
Query: 187 GLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEV 245
G+ + + ++++N + ++ + GYE T +IK L +G++ E
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 246 EAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRG 305
++ +V +G + N +V +C S A++L+R+ Y I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 306 LVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
L R G +D A+ F++ +++G S V YN+L+ L + + ND LL DM +P
Sbjct: 238 LCRDGCIDAAISLFKE-METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 366 DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
+++T N +L F K G A ELY G+SPN + Y L+ C
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS-LVEDNY 207
SR V + + F+ L V + GK A L+ +M +G+ + Y+ L++ +++
Sbjct: 291 SREIVPNVITFNVLLDV-FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 208 QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
A +++ +R K VT +IK C R+++ + G + + L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
V C S + + A EL +E + G P YG+ + GL G+L++ALE F + S+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
+ V Y T+I + + ++ D + L + P+++T ++ CK G A
Sbjct: 470 DL-GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L + G +PN Y LI DG
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 2/210 (0%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
R + + + +L+ GY + + D + +F + +GL + Y +L+ +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 210 AFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ + ++ G V T I++ LC G+LE+ L S +L ++
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
+C + E A L G P Y + I GL + G L EA R K + +G
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR-KMEEDGN 539
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDM 358
P+ YNTLI LR+ L L+ +M
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQ 208
RG V + V + LV G+ +GK +A LF +M G+ D Y +LL+ L ++ +
Sbjct: 397 RGLVANAVTYS-ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
A ++ + + K V +I+ +CK G++E+ L G + + ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
LC A L+R+ G+ P + Y IR +R G L + + + +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
GY P +NTLI L E ++++ L+ M E PD+VT N+++ C+ G +A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 387 LELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
L+L + + + Y +I +LC DGC
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 18/290 (6%)
Query: 128 IFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQG 187
+F +++ L+P ++ F +TL+ GY G D L +M
Sbjct: 262 VFDEITKRSLQPTVVSF----------------NTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 188 LDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVE 246
D F Y L+N+L ++N + + +++ ++G + V +I + G ++ ++
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
++ G + N LV C + A +V G P + Y I G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 307 VRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPD 366
RGG ++ ALE R++ D G V ++ L+C + +E R+ D L +M PD
Sbjct: 426 CRGGDVETALEI-RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 367 MVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
VT ++ FCK G A +L G P+ + Y L+ LC G
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQ 208
RG + + V F TL+ G++ G+ D+ + KM +GL D Y+ L+N ++ +
Sbjct: 339 RGLIPNDVIFT-TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
A +++ IRR +T +I C+ G +E + +G EL + LV
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
+C R A +RE +G P + Y + + + G + ++ + S+G+
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ-SDGH 516
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
VPS V YN L+ L + ++ + LL M +PD +T N +L
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 2/231 (0%)
Query: 187 GLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEV 245
G L+ + +++L+N E N +A V +R + V+ +I CK G L+E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 246 EAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRG 305
+ + S + L+ LC N+ + A L E G P + + I G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 306 LVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
R G +D E + QK S+G P V YNTL+ + L ++ M P
Sbjct: 355 HSRNGEIDLMKESY-QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 366 DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
D +T ++ FC+ G + ALE+ Q G+ + + + L+ +C +G
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQI 218
+ +L++GY D A +F +M +G + Y L++ L V A D+
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+ + + T ++IK LC R E + + +G + + L+ LC +FE
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+A EL+ + G P Y I G + G +++A++ + +S P+ YN L
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNEL 434
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + N ++ +L M E LPD+VT N+++ C+ G D A L S + GL
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 399 SPNHMAYKYLILTLC 413
P+ Y +I +LC
Sbjct: 494 VPDQWTYTSMIDSLC 508
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 134/328 (40%), Gaps = 30/328 (9%)
Query: 99 DGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVR 158
D D + L F W + PR+ H+ ++A++ +L + G V +
Sbjct: 100 DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLL---------------INNGYVGVVFK 144
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKM----RFQ-GLDLDGFGYHVLLNS-----LVEDNYQ 208
++ G L L KM RF+ L Y+ LLNS LV++ Q
Sbjct: 145 IRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQ 204
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+++ +++ Y T ++ CK G +EE Y++ +V +G + L+
Sbjct: 205 VYMEMLEDKVCPNIY----TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
C + A ++ E G E AY I GL R+DEA++ F + +D E +
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ Y LI L R ++ L+ +M ET P++ T ++ C + A E
Sbjct: 321 -PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L + GL PN + Y LI C G
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 4/270 (1%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+ L K +V V +++L+ G +G D A L M +GL D + Y +++S
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 202 LVEDN-YQNAFDVIANQIRRKGYESHVTN-VIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
L + + A D+ + + +KG +V +I CK G+++E L ++
Sbjct: 507 LCKSKRVEEACDLF-DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
+ N L+ LC + + A L + G P + + I L++ G D A F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
+Q S G P Y T I RE RL D ++ M E PD+ T ++++ +
Sbjct: 626 QQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLI 409
LG + A ++ G P+ + LI
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 109/276 (39%), Gaps = 3/276 (1%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+D K VR + L+ + + AL+L +M G+ + Y VL++S
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 202 LVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
L ++ A +++ + + + +T +I CK+G +E+ + + +
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
N L+ C SN +A+ ++ + P Y I G R G D A
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 321 QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKL 380
D G VP Y ++I L + R+ + L + + P++V A++ +CK
Sbjct: 487 LMND-RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 381 GMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G D A + PN + + LI LC DG
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 3/297 (1%)
Query: 121 TRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLF 180
T T+ + + L ++ + L+ +++ + + + L+ K + A L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 181 GKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQ 239
G+M +GL + Y+ L+N + ++A DV+ RK + T +IK CK
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 240 GRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAY 299
+ + LN ++ N L+ C S F+ A L+ G P + Y
Sbjct: 442 N-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
I L + R++EA + F + +G P+ V Y LI + ++++ + +L M
Sbjct: 501 TSMIDSLCKSKRVEEACDLF-DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
LP+ +T NA++ C G A L + GL P LI L DG
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 19/294 (6%)
Query: 124 TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKM 183
T+ ++ L ++K D + V V + L+ GY AGK D A + KM
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 184 RFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRL 242
+ + ++ L++ L D ++ ++ + G + V T+ I+I L K G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 243 EEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLW 302
+ + ++ SG + + C R A +++ + +G P Y
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 303 IRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETC 362
I+G G+ + A + ++ RD+ G PS + +LI LL ++ Y +E
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDT-GCEPSQHTFLSLIKHLL------EMKYGKQKGSE-- 729
Query: 363 TLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
P++ M+ ++ F D +EL + ++PN +Y+ LIL +C G
Sbjct: 730 --PELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN-AFDVIANQI 218
+ T + Y G+ A + KMR G+ D F Y L+ + N AFDV+ ++
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL-KRM 698
Query: 219 RRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
R G E S T + +IKHL +E GS EL + + F
Sbjct: 699 RDTGCEPSQHTFLSLIKHL--------LEMKYGKQKGSEPELCA---------MSNMMEF 741
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
+ VEL+ + P +Y I G+ G L A + F + +EG PS + +N
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
L+ + + N+ ++ DM LP + + ++C K G + ++ + Q G
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Query: 398 LSPNHMAYKYLI 409
+ +A+K +I
Sbjct: 862 YYEDELAWKIII 873
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 2/259 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
+LV G GK + AL+L ++ G+ + F Y+ L++SL + + +++ +++ +
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 222 GYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
G + VT I+I C++G+L+ ++L +V +G +L N L+ C A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+ E P Y + G G++++AL + + +G PS + TL+
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE-MTGKGIAPSIYTFTTLLS 515
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
L R + D L +M E P+ VT N ++ +C+ G A E ++ G+ P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 401 NHMAYKYLILTLCWDGCPS 419
+ +Y+ LI LC G S
Sbjct: 576 DTYSYRPLIHGLCLTGQAS 594
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVI 233
+A+ LF M G+ D + Y ++ SL E + A ++IA+ + V ++I
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSG 291
LCK+ ++ E L +GK+L V + LV LC FE +E++ E
Sbjct: 270 DGLCKKQKVWEAVGIKKDL--AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P E A + GL + G+++EAL ++ D G P+ YN LI L + + ++
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF-GVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
L M + P+ VT + ++ FC+ G D AL GL + Y LI
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG 222
L+ G+ GK + AL + +M +G+DLD Y VL++ ++ + F + ++ +G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 223 YE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
+ V +I K G +E + ++ G + ++ LC + A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGG-RLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
L + S P + YG ++ L +G + +A+E +G + + YN LI
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL--HNAILKGLLANTATYNMLIR 795
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
R+ R+ + L+ M PD +T ++ C+ A+EL++S ++ G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 401 NHMAYKYLILTLCWDG 416
+ +AY LI C G
Sbjct: 856 DRVAYNTLIHGCCVAG 871
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 10/229 (4%)
Query: 179 LFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLC 237
L +M +GL D Y ++++ + +++ AF + I + VT VI LC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 238 KQGRLEEVEAYLNGL--VGS--GKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
K G + E E + + V S + +G ++ L D ++AVEL G
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD---MQKAVELHNAI-LKGLL 784
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
Y + IRG R GR++EA E + +G P + Y T+I L R N +
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELI-TRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
L M E PD V N ++ C G A EL + + GL PN+
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 23/291 (7%)
Query: 136 KLRPLILDFLRKF----SRGRVTHKVRFH---------------DTLVVGYAIAGKPDIA 176
KL P ++ + S+G++ +R + TL+ G AG A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 177 LHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKH 235
+ LF +M + + Y+V++ E+ + AF+ + + + +I
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 236 LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPL 295
LC G+ E + +++GL EL+ L+ C + E A+ + +E G
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 296 ENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
YG+ I G ++ ++ D G P V Y ++I + + + +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHD-RGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 356 -MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
+ +NE C +P+ VT AV+ CK G + A L S PN + Y
Sbjct: 706 DLMINEGC-VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 6/305 (1%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L L+ L K ++ V +T++
Sbjct: 220 GCQPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ + Y L++ L + +A ++++ I +K + VT
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+ E E + ++ + N LV C +R ++A ++ +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
FP Y I+G + R+++ E FR+ G V V Y TLI L + ++
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFRE-MSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
+ M PD++T + +L C G + ALE++ + + + Y +I
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 412 LCWDG 416
+C G
Sbjct: 515 MCKAG 519
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 2/290 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F + +++ K +++ K R + H + ++ L+ + + +AL L GKM
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLE 243
G + LLN + + +Q+ GY +T +I L +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A ++ +V G + + +V LC + A+ L+ + + + I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L + +D+AL F++ +++G P+ V Y++LI L R +D LL DM E
Sbjct: 268 DSLCKYRHVDDALNLFKE-METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++VT NA++ F K G A +LY + + P+ Y L+ C
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 121/333 (36%), Gaps = 37/333 (11%)
Query: 120 HTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHL 179
H T+ + R L L L K + + +L+ GY + A+ L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 180 FGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCK 238
+M G D + L++ L + + A ++ ++R + VT +V+ LCK
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 239 QGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENA 298
+G + LN + + E N ++ LC + A+ L +E T G P
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 299 YGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDM 358
Y I L GR +A + + + P+ V +N LI ++E + + L DM
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 359 ----------------NETC-------------------TLPDMVTMNAVLCFFCKLGMA 383
N C PD+VT N ++ FCK
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ EL+ S GL + + Y LI L DG
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 43/311 (13%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D L+ K + G +P + + + + L+ D + K ++ +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK----KINPNLVTF 333
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIR 219
+ L+ + GK A L+ M + +D D F Y+ L+N + D A + +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRF 277
+ + VT +IK CK R+E+ + S + L G V + L+ L
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE----------- 326
+ A ++ ++ + G P Y + + GL G+L++ALE F + SE
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 327 -----------------------GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
G P+ V YNT+I L + L + Y LL M E
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 364 LPDMVTMNAVL 374
LP+ T N ++
Sbjct: 572 LPNSGTYNTLI 582
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIA 215
V ++TL+ G+ + + + LF +M +GL D Y L+ L D + NA V
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ +T I++ LC G+LE+ + + S +L ++ +C +
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ + +L G P Y I GL L EA ++ ++ +G +P+ Y
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPNSGTY 578
Query: 336 NTLICRLLRE 345
NTLI LR+
Sbjct: 579 NTLIRAHLRD 588
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 3/314 (0%)
Query: 104 SCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTL 163
+ L FF W RQP F H T+ + L RAK I L + R ++ L
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 164 VVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY 223
+ Y A A+++F +M+ G + D Y L++ + + + + +++ G
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 224 ESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVE 282
T ++I L K G L +VG G + N ++ + + +E A++
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 283 LVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRL 342
L R+ +G P + Y + + L G L+EA F + + + +VP Y L+
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ-RKNWVPDEPVYGLLVDLW 579
Query: 343 LRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
+ ++ + M + P++ T N++L F ++ A L S GL P+
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSL 639
Query: 403 MAYKYLILTLCWDG 416
Y L+L+ C D
Sbjct: 640 QTYT-LLLSCCTDA 652
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 14/240 (5%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY--ESHVTNVIVI 233
ALH FG +D + + +L + DNY NA R+ G+ + H T ++
Sbjct: 316 ALHNFG------FRMDAYQANQVLKQM--DNYANALGFFYWLKRQPGFKHDGH-TYTTMV 366
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
+L + + E+ L+ +V G + + N L+ +N + A+ + + +G
Sbjct: 367 GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE 426
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
P Y I + G LD A++ + Q+ G P Y+ +I L + L +
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR 485
Query: 354 LLMDM-NETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
L +M + CT P++VT N ++ K + AL+LY G P+ + Y ++ L
Sbjct: 486 LFCEMVGQGCT-PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 127/311 (40%), Gaps = 6/311 (1%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGY 167
FF+ QP + F + + + ++ F +K ++H + L+ +
Sbjct: 59 FFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 168 AIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESH 226
+ AL + GKM G + + LL+ N +AF ++ ++ GYE +
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-SGYEPN 175
Query: 227 VTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
V +I LCK G L LN + G N L+ LC S R+ A ++R
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
+ P + I V+ G LDEA E +++ S P++V YN++I L
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIINGLCMH 294
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
RL D M P++VT N ++ FCK M D ++L+ S G + + Y
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 406 KYLILTLCWDG 416
LI C G
Sbjct: 355 NTLIHGYCQVG 365
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 37/296 (12%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIA 215
V ++TL+ G G+ +IAL L +M +GL D Y+ LL L + +A ++
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ ++R VT +I KQG L+E + ++ S + + N ++ LC
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
R A + + G FP Y I G + +DE ++ F Q+ EG+ Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF-QRMSCEGFNADIFTY 354
Query: 336 NTLI---CRLLRENRLNDVYYLLM--------------------------------DMNE 360
NTLI C++ + D++ ++ DM E
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 361 TCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ +V N ++ CK + A EL+ G+ P+ Y +IL LC +G
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 6/302 (1%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
+H +F + R L L K + + +L+ G+ + + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHL 236
L M G + + Y+ L++ L ++ N + N++ +KG + V T ++ L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFP 294
C GR + L ++ + ++ V F L+ V + A EL +E S P
Sbjct: 222 CYSGRWSDAARMLRDMMK--RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
Y I GL GRL +A + F S+G P+ V YNTLI + +++ L
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
M+ D+ T N ++ +C++G VAL+++ ++P+ + + L+ LC
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 415 DG 416
+G
Sbjct: 399 NG 400
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
++TL+ G+ D + LF +M +G + D F Y+ L++ + + A D+ +
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R+ +T+ I++ LC G +E + + S K + N ++ LC +++ E
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
+A EL G P Y + I GL + G EA E R+ ++ EG +
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE-EGII 488
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 13/318 (4%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFL---RKFSRGRVTHKVRFHDT 162
L+FFDW + F+H +F + L RA+ + +FL + S G V + R+ ++
Sbjct: 85 LRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK- 221
L+ Y AG ++ LF M+ G+ ++ LL+ L++ + +++RR
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 222 --GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
+S+ N + I CK ++E + N ++ LC + + +
Sbjct: 204 GVTPDSYTFNTL-INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 280 AVELVREFGTSGS--FPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
A ++ + P +Y +RG +DEA+ F S G P+ V YNT
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML-SRGLKPNAVTYNT 321
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTL--PDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
LI L +R +++ +L+ N+ T PD T N ++ C G D A++++
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 396 FGLSPNHMAYKYLILTLC 413
L P+ +Y LI TLC
Sbjct: 382 MKLHPDSASYSVLIRTLC 399
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 16/239 (6%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVI--AN 216
+ TLV GY + + D A+ +F M +GL + Y+ L+ L E + Y D++ N
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 217 QIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNR 276
T I+IK C G L+ ++ + + L+ LC N
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 277 FERAVELVREF-------GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEG 327
F+RA L E G PL AY L G+ +A + FRQ KR +
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
PS Y TLI RE + Y LL+ M +PD+ T ++ K+G A +A
Sbjct: 464 -PPS---YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLA 518
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 286 EFGTSGSFPLENAY-GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
E ++G L++ Y IR G E+++ F Q G PS + +N+L+ LL+
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLF-QTMKQMGISPSVLTFNSLLSILLK 185
Query: 345 ENRLNDVYYLLMDMNETCTL-PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
R + L +M T + PD T N ++ FCK M D A ++ + +P+ +
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 404 AYKYLILTLCWDG 416
Y +I LC G
Sbjct: 246 TYNTIIDGLCRAG 258
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 39/339 (11%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L + L K ++ V + T++
Sbjct: 220 GCQPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ + Y L++ L + + +A ++++ I RK + VT
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+L E E + ++ + + L+ C +R + A + +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFR----------------------QKRD----- 324
FP Y I G + R+DE +E FR Q RD
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 325 -------SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
S+G P+ + YNTL+ L + +L + + + P + T N ++
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
CK G + +L+ S S G+ P+ + Y +I C G
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 2/290 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F + +++ K L++ K R ++H + ++ L+ + + +AL L GKM
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLE 243
G + LLN + + +Q+ GY +T +I L +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A ++ +V G + + +V LC + A L+ + + Y I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L + D+AL F + +++G P+ + Y++LI L R +D LL DM E
Sbjct: 268 DSLCKYRHEDDALNLFTE-MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++VT NA++ F K G A +LY + + P+ Y LI C
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRR 220
TL+ G + K A+ L +M +G + Y V++N L + + AF+++
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
K + V VI LCK ++ + G + + L+ LC+ R+ A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVPSHVRYNTL 338
L+ + P + I V+ G+L EA + + + KR + P Y++L
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID---PDIFTYSSL 371
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I +RL++ ++ M P++VT N ++ FCK D +EL+ SQ GL
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 399 SPNHMAYKYLI 409
N + Y LI
Sbjct: 432 VGNTVTYTTLI 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNA 210
++ V + L+ + GK A L+ +M + +D D F Y L+N + D A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE-----VEAYLNGLVGSGKE----LHG 261
+ I + + + VT +I CK R++E E GLVG+ +HG
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
F CD+ A + ++ + G P Y + GL + G+L++A+ F
Sbjct: 445 ----FFQARDCDN-----AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ S+ P+ YN +I + + ++ D + L ++ PD++ N ++ FC+ G
Sbjct: 496 LQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 382 MADVALELYSSRSQFGLSPN 401
+ + A L+ + G P+
Sbjct: 555 LKEEADALFRKMREDGPLPD 574
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 121/300 (40%), Gaps = 8/300 (2%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
+H T+ + R L L L K + + +L+ GY + A+
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHL 236
L +M G D + L++ L N + + +++ ++G + + VT +V+ L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
CK+G ++ LN + + E + + ++ LC + A+ L E G P
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y I L R +A + + P+ V +N LI ++E +L + L
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 357 DMNETCTLPDMVTMNAVLCFFC---KLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+M + PD+ T ++++ FC +L A EL S+ F PN + Y LI C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLINGFC 411
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 39/339 (11%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L L L+K +G++ V ++T++
Sbjct: 216 GCQPDL----VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
+ AL+LF +M +G+ + Y+ L+ L + +A ++++ I RK + VT
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+L E E + ++ + + L+ C +R + A + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFR----------------------QKRD----- 324
FP Y I+G + R+DE +E FR Q R+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 325 -------SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
S+G +P + Y+ L+ L ++ + + + PD+ T N ++
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
CK G + +L+ S S G+ PN + Y ++ C G
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 2/290 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F+ + +++ L++ + ++H + + L+ + + +AL + KM
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLE 243
G + D + LLN N + + Q+ GY+ T +I L + R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A ++ +V G + +V LC + A+ L+++ P Y I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L +++AL F + D++G P+ V YN+LI L R +D LL DM E
Sbjct: 264 DALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++VT +A++ F K G A +LY + + P+ Y LI C
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 43/331 (12%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
+H T++ + R L L L K + + ++L+ G+ + A+
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHL 236
L G+M G D F ++ L++ L N + + +++ KG + VT IV+ L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP-- 294
CK+G ++ + L + E N ++ LC+ A+ L E G P
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 295 ---------LENAYGLW-------------------------IRGLVRGGRLDEALEFFR 320
L N YG W I V+ G+L EA + +
Sbjct: 292 VTYNSLIRCLCN-YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 321 Q--KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
+ KR + P Y++LI +RL++ ++ M P++VT N ++ FC
Sbjct: 351 EMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 379 KLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
K D +EL+ SQ GL N + Y LI
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 2/243 (0%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNV 230
K D A++LFG M + LL+++ + N + + Q++ G ++ T
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
I+I C++ +L A L ++ G E +N L+ C NR AV LV +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
G P + I GL R R EA+ + +G P V Y ++ L + ++
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALV-DRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
LL M + P +V N ++ C + AL L++ G+ PN + Y LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 411 TLC 413
LC
Sbjct: 300 CLC 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 4/246 (1%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGY---HVLLNSLVEDNYQNAFDVIANQIRRKGYESHV 227
GK A F F D G Y + +N L + +A ++ + ++ + + S V
Sbjct: 23 GKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIV 82
Query: 228 TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
++ + K + + V + + G + + L+ C ++ A+ ++ +
Sbjct: 83 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G P + G G R+ +A+ Q + GY P +NTLI L R NR
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNR 201
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
++ L+ M PD+VT V+ CK G D+AL L Q + P + Y
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 408 LILTLC 413
+I LC
Sbjct: 262 IIDALC 267
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ G+ A + D + LF +M +GL + Y L++ + + ++ Q+
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G + T I++ LC G++E L S E N ++ +C + + E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+L G P Y + G R G +EA FR+ ++ EG +P YNTL
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE-EGPLPDSGTYNTL 577
Query: 339 ICRLLRE 345
I LR+
Sbjct: 578 IRAHLRD 584
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFS-RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
T+ + + +AK ++ R+ S RG V + V + TL+ G+ A + D A +F
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT-TLIHGFFQARECDNAQIVFK 455
Query: 182 KMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQG 240
+M G+ D Y +LL+ L + V+ ++R E + T I+I+ +CK G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 241 RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYG 300
++E+ L G + + ++ C E A L RE G P Y
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 301 LWIRGLVRGGRLDEALEFFRQKR 323
IR +R G + E R+ R
Sbjct: 576 TLIRAHLRDGDKAASAELIREMR 598
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
++ + R V +++LV G +G+ A L M + + + + +++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 202 LV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
V E + A + RR T +I LC GR++E + L+ +V G
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
N L+ C S R + +L RE G Y I+G + GR D A E F
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF- 372
Query: 321 QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKL 380
+ DS P+ Y+ L+ L R+ L +M ++ D+ T N V+ CK+
Sbjct: 373 SRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 381 GMADVALELYSSRSQFGLSPNHMAYKYLILTLC----WD 415
G + A +L+ S S GL P+ ++Y +I C WD
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
IVI LC+ R + + ++ G E V+ L+ C NR A++LV +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFF-RQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P Y I G + G +++A+E F R +RD G V YN+L+ L R +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD--GVRADAVTYNSLVAGLCCSGRWS 226
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
D L+ DM +P+++T AV+ F K G A++LY ++ + P+ Y LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 410 LTLCWDG 416
LC G
Sbjct: 287 NGLCMHG 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 6/298 (2%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPD 174
Q R + F+ + ++++K L++ + H + ++ ++ +
Sbjct: 62 QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVI--ANQIRRKGYESHVTNV-I 231
IAL + GKM G + D L+N + N FD I +++ G+ V
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGN--RVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I CK G + + + + G N LV LC S R+ A L+R+
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P + I V+ G+ EA++ + ++ P YN+LI L R+++
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLY-EEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+L M LPD+VT N ++ FCK D +L+ +Q GL + + Y +I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 109/276 (39%), Gaps = 8/276 (2%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+D K + R + ++ A + D+ + LF M G+ D + Y++++N
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 202 LVE-DNYQNAFDVIANQIRRKGYESHVTNVI-VIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
L + A V+ ++ + GYE V V +I C+ R+ + ++ + G
Sbjct: 114 LCRCSRFVIALSVVG-KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
N ++ C AVEL G Y + GL GR +A
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 320 RQK--RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
R RD VP+ + + +I ++E + ++ L +M C PD+ T N+++
Sbjct: 233 RDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
C G D A ++ G P+ + Y LI C
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 298 AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMD 357
+Y + I L R R AL K GY P V ++LI + NR+ D L+
Sbjct: 106 SYNIVINCLCRCSRFVIALSVV-GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 358 MNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
M E PD+V N ++ CK+G+ + A+EL+ + G+ + + Y L+ LC G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 7/312 (2%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVV 165
L FF+ A T+ + L + + D +R+ F+ +
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQIRRKGYE 224
GY G AL +M +G++ D Y +L++ L E N + A ++ I+
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+ +T +I+ LCK G+LEE N ++ G E+ L+ +C RA ++
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+ G P Y I GL GR+ EA E S+G V + Y+TL+ ++
Sbjct: 371 GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV------SKGVVGDVITYSTLLDSYIK 424
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
++ V + E D+V N +L F +G A LY + + L+P+
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 405 YKYLILTLCWDG 416
Y +I C G
Sbjct: 485 YATMIKGYCKTG 496
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 7/249 (2%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ--NAFDVIANQIRRKGYESHVT 228
G + A+ ++ MR +GL + +L +LV DN + +A+ ++ N V
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTF--PSTILKTLV-DNLRSLDAYLLVVNAGETTLSSMDVI 656
Query: 229 N-VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
+ I+I LCK+G L + + G L+ N L+ LC A+ L
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G P E YG+ I L + G +A E S+G VP+ + YN+++ + +
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDA-EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
D ++ PD T+++++ +CK G + AL +++ +S + + +
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 408 LILTLCWDG 416
LI C G
Sbjct: 836 LIKGFCTKG 844
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 2/264 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ GY G +A + G F G D F Y L++ L + N + N+
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 220 RKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG + +V +IK L QG + E N + G N LV LC
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A LV+ + G FP + + I G +++ ALE D+ G P YN+L
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSL 502
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ L + ++ DV M E P++ T N +L C+ D AL L +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 399 SPNHMAYKYLILTLCWDGCPSGPF 422
+P+ + + LI C +G G +
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAY 586
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 38/353 (10%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVR-F 159
D + L+ F+ ++ F HT +T+ ++ L + + L H +
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ + Y GK A+++F +M F + F Y+ +++ LV+ Y + + ++R
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 220 RKGYESHVTN-VIVIKHLCKQGRLEEVEAYLNGLVGSGKELH------------------ 260
+G V + I +K CK R LN + G E++
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 261 -GSEV----------------NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
G E+ N L+ VLC + +L+ + G P Y L+I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
+GL + G LD A+ + +G P + YN LI L + ++ + L M
Sbjct: 259 QGLCQRGELDGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
PD T N ++ +CK GM +A + G P+ Y+ LI LC +G
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQI 218
++ L+ G K A GKM +GL+ D + Y+ L+ + Q A ++ + +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
T +I LC +G A N +G G + + N L+ L +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A +L E G P + + + GL + G + +A + + S+GY P +N L
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA-DGLVKVMISKGYFPDIFTFNIL 467
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + ++ + +L M + PD+ T N++L CK + +E Y + + G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 399 SPNHMAYKYLILTLC 413
+PN + L+ +LC
Sbjct: 528 APNLFTFNILLESLC 542
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
L K+ +G+ + F Y++ + L + A ++ I + +T +I L
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
CK + +E E YL +V G E N L+ C + A +V + +G P +
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y I GL G + AL F + +G P+ + YNTLI L + + + L
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+M+E +P++ T N ++ CK+G A L G P+ + LI
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 2/243 (0%)
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHL 236
LFGKM G+ L ++ LL L + + + +++ ++G ++ T + I+ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
C++G L+ + L+ G + N L+ LC +++F+ A + + G P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y I G +GG + A E G+VP Y +LI L E N L
Sbjct: 322 YTYNTLIAGYCKGGMVQLA-ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ P+++ N ++ GM A +L + S+ GL P + L+ LC G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 417 CPS 419
C S
Sbjct: 441 CVS 443
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFD 212
+ V ++TL+ G + G A L +M +GL + +++L+N L + + D
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 213 VIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
+ + KGY + T I+I Q ++E L+ ++ +G + N L+ L
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
C +++FE +E + G P + + + L R +LDEAL + ++ + P
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN-KSVNPD 565
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMV-TMNAVLCFFCKLGMADVALELY 390
V + TLI + L+ Y L M E + T N ++ F + +A +L+
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 391 SSRSQFGLSPNHMAYKYLILTLCWDG 416
L P+ Y+ ++ C G
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTG 651
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 93/255 (36%), Gaps = 34/255 (13%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+ L+ GY+ K + AL + M G+D D + Y+ LLN L
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL------------------ 506
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
CK + E+V +V G + N L+ LC + + A
Sbjct: 507 ----------------CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+ L+ E P +G I G + G LD A FR+ ++ S YN +I
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+ + L +M + C PD T ++ FCK G ++ + + G P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 401 NHMAYKYLILTLCWD 415
+ +I LC +
Sbjct: 671 SLTTLGRVINCLCVE 685
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 147/379 (38%), Gaps = 56/379 (14%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
V+ LS G G FF W P H+ + + IL++ K L K
Sbjct: 47 VISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKL 106
Query: 149 SRGRVTHKVRFHDTLVVG------------------YAIAGKPDIALHLFGKMRFQGLDL 190
++ + +LV G YA AG + ++ +F ++R GL
Sbjct: 107 AQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKP 166
Query: 191 DGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES--HVTNVIVIKHLC-KQGRLEEVEA 247
VLLNSLV+ + I ++ + G + HV NV+V H C K G E+ E
Sbjct: 167 HLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV--HACSKSGDPEKAEK 224
Query: 248 YLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLV 307
L+ + G N L+ V C + A+ + SG P Y +I G
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 308 RGGRLDEALEFFRQKRD---------------------------------SEGYVPSHVR 334
R GR+ EA FR+ +D S G+ P V
Sbjct: 285 REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS 394
YN+++ +L + R+ + LL +M+ PD +T N ++ +CK+ A+++
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 395 QFGLSPNHMAYKYLILTLC 413
+ GL + +YK LI C
Sbjct: 405 ESGLKLDMYSYKALIHGFC 423
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
H+ L+ G + A+ L +MR L D F Y+ ++ E +AN+++
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G S VT I+I CK G+++E +L + G E L+ CD +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
R L E G P Y IRG + G+L EA E F + G P+ Y L
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGL 323
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I L + + LL M E P+ VT N ++ CK G+ A+E+ +
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 399 SPNHMAYKYLILTLCWDG 416
P+++ Y L+ LC G
Sbjct: 384 RPDNITYNILLGGLCAKG 401
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE----DNYQNAFDVIANQI 218
L+ + AGK D A+ +M+F GL+ D Y L+ + D + FD + +
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV---L 274
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVE-------------------AYLNGLVGSGK-- 257
R +T +I+ CK G+L+E ++GL G GK
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 258 --------------ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E + N ++ LC AVE+V + P Y + +
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 304 RGLVRGGRLDEALEF-FRQKRDSEGYVPSHVRYNTLICRLLRENRLN---DVYYLLMDMN 359
GL G LDEA + + +DS P + YN LI L +ENRL+ D+Y LL+
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV--- 451
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
E D VT N +L K G + A+EL+ S + N Y +I C G
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 48/322 (14%)
Query: 129 FRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGL 188
F L + K I +F+ RG V V + L+ G GK AL L M +
Sbjct: 292 FCKLGQLKEASEIFEFM--IERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 189 DLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEA 247
+ + Y++++N L +D +A +++ +R+ ++T I++ LC +G L+E
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 248 YLNGLVGSGKELHGSEV--NFLVGVLCDSNRFERAVE----LVREFGTSGSFPLENAYGL 301
L ++ + N L+ LC NR +A++ LV + G +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV----TTNI 464
Query: 302 WIRGLVRGGRLDEALEFFRQKRDS-------------EGYV------------------- 329
+ ++ G +++A+E ++Q DS +G+
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 330 --PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
PS YN L+ L +E L+ + L +M PD+V+ N ++ K G A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 388 ELYSSRSQFGLSPNHMAYKYLI 409
L S+ GLSP+ Y LI
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLI 606
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 189 DLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEA 247
D D Y+ L++ L ++N A D+ + + G VT I++ K G + +
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 248 YLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLV 307
+ S + ++ C + A L+ + S P Y + L
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 308 RGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDM 367
+ G LD+A F + + + P V +N +I L+ + LL+ M+ PD+
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 368 VTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
T + ++ F KLG D A+ + G P+
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 4/296 (1%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF-SRGRVTHKVRFHDTLVV 165
+FF WA + F H T+ ++ IL++ + ++ L + ++G +T + +
Sbjct: 180 RFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMK 237
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES 225
+A A + A+ +F M+ + + LL+SL V+ ++++ + +
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 297
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
+T +++ C+ L E N ++ G + N ++ L S + A++L
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH 357
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
+ G P +Y + IR + ++ A+E+F DS G P Y LI +
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQ 416
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
+L+ VY LL +M E PD T NA++ M + A +Y+ Q + P+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 142/322 (44%), Gaps = 16/322 (4%)
Query: 87 PFVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSR------AKLRPL 140
P ++ + G D + + KFF WAG+Q + H A + A L+R A P
Sbjct: 125 PSIVAEVLKLGNDAAVAA--KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPE 182
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
++D S+GR + +F + L+ +A + +++ KM+ G F Y+ +++
Sbjct: 183 LMD-----SQGRPPSEKQF-EILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 201 SLVEDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
+LV++ Y + + + G E T +I++K LCK GR+EE+ L + + +
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
++ L + ++ + E P AYG + GL + GR++ E F
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
+ + + + + Y LI + + ++ L D+ ++ + D+ NAV+ C
Sbjct: 357 MEMKGKQILIDREI-YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 380 LGMADVALELYSSRSQFGLSPN 401
+ D A +L+ + L P+
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPD 437
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 254 GSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLD 313
G+ + L+ + D+ R R + + G P Y + LV+ G D
Sbjct: 186 SQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFD 245
Query: 314 EALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
AL + ++ +G V + L+ L + R+ ++ +L M E PD+ A+
Sbjct: 246 LALAVYEDFKE-DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 374 LCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ G D +L ++ + + P+ MAY L++ LC DG
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 6/328 (1%)
Query: 92 VLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRG 151
V G GD L+ F + RQ + + +L R L L+ +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED--NYQN 209
V+ V + L+ Y G+ + +L L +M+ + + Y+ ++N+ +++
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLCK-QGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ A ++R +G + + + C +G +E E + G + + LV
Sbjct: 231 LLGLFA-EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
R E+ +L+ E + GS P +Y + + + G + EA+ F Q + + G
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ-AAGC 348
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ Y+ L+ + R +DV L ++M + T PD T N ++ F + G +
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L+ + + P+ Y+ +I C G
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFA-CGKG 435
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 7/274 (2%)
Query: 145 LRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
L++ + + +++L++G + A + D A +M GL + F Y ++ +E
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 205 DNYQNAFDVIANQIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
+ + D ++R G + V +I CK+G++ E + +V G
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
L+ L +++ + A E+ RE G P +YG+ I G + G + +A F +
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
+ EG P+ + YN L+ R + LL +M+ P+ VT ++ +CK G
Sbjct: 655 E-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
A L+ GL P+ Y L+ DGC
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLV-----DGC 742
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 19/265 (7%)
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG 222
L+ Y GK A + M QG+ D Y VL+N L +++ + + I ++R KG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 223 YESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
V + ++I K G +++ + + +V G + N L+G C S E+A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI-- 339
EL+ E G P Y I G + G L EA F + + +G VP Y TL+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDSFVYTTLVDG 741
Query: 340 -CRLLRENRLNDV--YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS----- 391
C RLNDV + N+ NA++ + K G ++ E+ +
Sbjct: 742 CC------RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 392 SRSQFGLSPNHMAYKYLILTLCWDG 416
S +FG PN + Y +I LC +G
Sbjct: 796 SFDRFG-KPNDVTYNIMIDYLCKEG 819
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 12/256 (4%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+D L+ G + + A L +M G+ LD Y +L++ L++ +A + +++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 220 RKGYESHVTNVIVIKHLC------KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCD 273
SH N+ + C K+G +E+ +A +G++ SG L+ C
Sbjct: 340 -----SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
+ EL+ E YG ++G+ G LD A ++ S G P+ V
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNVV 453
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSR 393
Y TLI L+ +R D +L +M E PD+ N+++ K D A
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 394 SQFGLSPNHMAYKYLI 409
+ GL PN Y I
Sbjct: 514 VENGLKPNAFTYGAFI 529
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 2/258 (0%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAF 211
+ K +D + + G + A LF M GL Y L+ E N + +
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 212 DVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
+++ +R S T V+K +C G L+ + ++ SG + L+
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
++RF A+ +++E G P Y I GL + R+DEA F + ++ G P+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPN 521
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
Y I + + + +M E LP+ V ++ +CK G A Y
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 392 SRSQFGLSPNHMAYKYLI 409
S G+ + Y L+
Sbjct: 582 SMVDQGILGDAKTYTVLM 599
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 102/282 (36%), Gaps = 50/282 (17%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNV 230
K D A +F +MR +G+ D F Y VL+N + N Q A + + E NV
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE----EGLTPNV 662
Query: 231 IVIKHL----CKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELV 284
I+ L C+ G +E+ + L+ + S K LH + V + ++ C S A L
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEM--SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV--------------- 329
E G P Y + G R ++ A+ F +
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 330 ----------------------PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDM 367
P+ V YN +I L +E L L M +P +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 368 VTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+T ++L + K+G ++ G+ P+H+ Y +I
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 16/264 (6%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRR 220
T++ GY +G A LF +M+ +GL D F Y L++ ++ + A + +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN--K 759
Query: 221 KGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS----EVNFLVGVLCDSN 275
KG S +I + K G+ E LN L+ + G N ++ LC
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
E A EL + + P Y + G + GR E F + + G P H+ Y
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-AAGIEPDHIMY 878
Query: 336 NTLICRLLRENRLNDVYYLLMDM------NETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
+ +I L+E L+ M ++ C L + T A+L F K+G +VA ++
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS-ISTCRALLSGFAKVGEMEVAEKV 937
Query: 390 YSSRSQFGLSPNHMAYKYLILTLC 413
+ + P+ LI C
Sbjct: 938 MENMVRLQYIPDSATVIELINESC 961
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 6/305 (1%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L + L K ++ V +T++
Sbjct: 145 GCQPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ + Y L++ L + +A ++++ I +K + VT
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I K+G+ E E + ++ + N L+ C +R ++A ++ +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
FP + Y I+G + R+++ E FR+ G V V Y TLI L + ++
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFRE-MSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
+ M PD++T + +L C G + ALE++ + + + Y +I
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 412 LCWDG 416
+C G
Sbjct: 440 MCKAG 444
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 2/291 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F + +++ K L++ K R ++H + ++ L+ + + +AL L GKM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLE 243
G + LLN + + +Q+ GY +T +I L +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A ++ +V G + + +V LC + A L+ + + + I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L + +D+AL F++ +++G P+ V Y++LI L R +D LL DM E
Sbjct: 193 DSLCKYRHVDDALNLFKE-METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
P++VT NA++ F K G A +L+ + + P+ Y LI C
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 122/334 (36%), Gaps = 35/334 (10%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
+H T+ + R L L L K + + +L+ GY + A+
Sbjct: 41 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 100
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHL 236
L +M G D + L++ L N + + +++ ++G + + VT +V+ L
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
CK+G ++ LN + + E N ++ LC + A+ L +E T G P
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 297 NAYGLWIRGLVRGGRLDEALEFFR---QKRDSEGYV------------------------ 329
Y I L GR +A + +K+ + V
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 330 -------PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
P YN+LI +RL+ + M PD+ T N ++ FCK
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ EL+ S GL + + Y LI L DG
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 4/217 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQI 218
+++L+ G+ + + D A +F M + D Y+ L+ + ++ ++
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R VT +I+ L G + + +V G + L+ LC++ + E
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 279 RAVELVREFGTSGSFPLE-NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
+A+E V ++ L+ Y I G+ + G++D+ + F +G P+ V YNT
Sbjct: 413 KALE-VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF-CSLSLKGVKPNVVTYNT 470
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
+I L + L + Y LL M E LPD T N ++
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQI 218
++TL+ G+ + + + LF +M +GL D Y L+ L D + NA V +
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+T I++ LC G+LE+ + + S +L ++ +C + + +
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+L G P Y I GL L EA ++ ++ +G +P YNTL
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPDSGTYNTL 506
Query: 339 ICRLLRE 345
I LR+
Sbjct: 507 IRAHLRD 513
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
+L+ G+ + + + A+ + +M G+ D Y +++SL ++ + N + +Q+
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 222 GYESHVTNVI-VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
G V ++ LC GR + ++ L G+ + N L+ +F A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
EL E P Y I G G +DEA + F +++G P V Y +LI
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL-METKGCFPDVVAYTSLIN 325
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+ +++D + +M++ + +T ++ F ++G +VA E++S G+ P
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 401 NHMAYKYLILTLCWDG 416
N Y L+ LC++G
Sbjct: 386 NIRTYNVLLHCLCYNG 401
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 211 FDVIAN-----QIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN 265
FDV+ N QI ++ + N++ + C+ + ++L ++ G E
Sbjct: 88 FDVVINLCDHLQIMGVSHDLYTCNLL-MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
L+ C NR E A+ +V + G P Y I L + G ++ AL F Q ++
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ-MEN 205
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P V Y +L+ L R D LL M + PD++T NA++ F K G
Sbjct: 206 YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
A ELY+ + ++PN Y LI C +GC
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 6/245 (2%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNV 230
K D+ ++L ++ G+ D + ++L+N + + ++ + G+E VT
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
+I C R+EE + +N +V G + ++ LC + A+ L +
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFR--QKRDSEGYVPSHVRYNTLICRLLRENRL 348
G P Y + GL GR +A R KR + P + +N LI ++E +
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK---PDVITFNALIDAFVKEGKF 263
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
D L +M P++ T +++ FC G D A +++ G P+ +AY L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 409 ILTLC 413
I C
Sbjct: 324 INGFC 328
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 7/278 (2%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
LR ++ ++ V + L+ + GK A L+ +M + + F Y L+N
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 204 EDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + + + KG + V +I CK ++++ + S K L G+
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM--SQKGLTGN 351
Query: 263 EVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
+ + L+ + A E+ + G P Y + + L G++ +AL F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 321 --QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
QKR+ +G P+ YN L+ L +L + DM + ++T ++ C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 379 KLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
K G A+ L+ S G+ PN + Y +I L +G
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 3/317 (0%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D + L FF W RQP F H T+ + L RAK I L + R +
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+ L+ Y A + A+++F +M+ G D Y L++ + + + + +++
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 221 KGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
G T ++I L K G L +V G + N ++ + + ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A++L R+ +G P + Y + + L G L+EA F + + + ++P Y L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLV 581
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ + + M P++ T N++L F ++ A EL + GL
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 400 PNHMAYKYLILTLCWDG 416
P+ Y L+L+ C DG
Sbjct: 642 PSLQTYT-LLLSCCTDG 657
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 3/317 (0%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D + L FF W RQP F H T+ + L RAK I L + R +
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+ L+ Y A + A+++F +M+ G D Y L++ + + + + +++
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 221 KGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
G T ++I L K G L +V G + N ++ + + ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A++L R+ +G P + Y + + L G L+EA F + + + ++P Y L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLV 581
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ + + M P++ T N++L F ++ A EL + GL
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 400 PNHMAYKYLILTLCWDG 416
P+ Y L+L+ C DG
Sbjct: 642 PSLQTYT-LLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 3/317 (0%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D + L FF W RQP F H T+ + L RAK I L + R +
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+ L+ Y A + A+++F +M+ G D Y L++ + + + + +++
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 221 KGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
G T ++I L K G L +V G + N ++ + + ++
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A++L R+ +G P + Y + + L G L+EA F + + + ++P Y L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLV 581
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ + + M P++ T N++L F ++ A EL + GL
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 400 PNHMAYKYLILTLCWDG 416
P+ Y L+L+ C DG
Sbjct: 642 PSLQTYT-LLLSCCTDG 657
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 2/262 (0%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAF 211
+T V + ++ G+ G A LF +M +GL+ D + L+N + + ++AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 212 DVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
V + I+ + VT +I LCK+G L+ L+ + G + + N +V L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
C S E AV+LV EF +G Y + + G +D+A E ++ +G P+
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPT 560
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
V +N L+ L D LL M P+ T N+++ +C A +Y
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 392 SRSQFGLSPNHMAYKYLILTLC 413
G+ P+ Y+ L+ C
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHC 642
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ TL+ G+ G A F +M + + D Y +++ + + +++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG E VT +I CK G +++ N ++ +G + L+ LC +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A EL+ E G P Y + GL + G ++EA++ + ++ G V Y TL
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTL 532
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ + ++ +L +M P +VT N ++ FC GM + +L + G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 399 SPNHMAYKYLILTLC 413
+PN + L+ C
Sbjct: 593 APNATTFNSLVKQYC 607
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 16/271 (5%)
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFD 212
T V + T+V GY G+ D L M+ +GL + + Y ++ L A +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 213 VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN------- 265
+ IR+ V +I CK+G + + E+H ++
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY-------EMHSRDITPDVLTYT 390
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
++ C A +L E G P + I G + G + +A +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P+ V Y TLI L +E L+ LL +M + P++ T N+++ CK G +
Sbjct: 451 -GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A++L GL+ + + Y L+ C G
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 88/242 (36%), Gaps = 2/242 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIK 234
A F +M QG+ D Y L++ + A ++ + V T +I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
C+ G + E + + G E L+ C + + A + +G P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
Y I GL + G LD A E + G P+ YN+++ L + + + L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
+ + D VT ++ +CK G D A E+ GL P + + L+ C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 415 DG 416
G
Sbjct: 574 HG 575
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 3/215 (1%)
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
V D++ FD++ + G + V +V + L G L E ++ G L
Sbjct: 153 VTDSFVQFFDLLVYTYKDWGSDPRVFDVF-FQVLVDFGLLREARRVFEKMLNYGLVLSVD 211
Query: 263 EVN-FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
N +L + D + A+ + REF G +Y + I + + GR+ EA
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ +GY P + Y+T++ R L+ V+ L+ M P+ +++ C++
Sbjct: 272 -MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A E +S + G+ P+ + Y LI C G
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 2/262 (0%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAF 211
+T V + ++ G+ G A LF +M +GL+ D + L+N + + ++AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 212 DVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
V + I+ + VT +I LCK+G L+ L+ + G + + N +V L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
C S E AV+LV EF +G Y + + G +D+A E ++ +G P+
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPT 560
Query: 332 HVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
V +N L+ L D LL M P+ T N+++ +C A +Y
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 392 SRSQFGLSPNHMAYKYLILTLC 413
G+ P+ Y+ L+ C
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHC 642
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ TL+ G+ G A F +M + + D Y +++ + + +++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG E VT +I CK G +++ N ++ +G + L+ LC +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A EL+ E G P Y + GL + G ++EA++ + ++ G V Y TL
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-FEAAGLNADTVTYTTL 532
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ + ++ +L +M P +VT N ++ FC GM + +L + G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 399 SPNHMAYKYLILTLC 413
+PN + L+ C
Sbjct: 593 APNATTFNSLVKQYC 607
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 16/271 (5%)
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFD 212
T V + T+V GY G+ D L M+ +GL + + Y ++ L A +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 213 VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN------- 265
+ IR+ V +I CK+G + + E+H ++
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY-------EMHSRDITPDVLTYT 390
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
++ C A +L E G P + I G + G + +A +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P+ V Y TLI L +E L+ LL +M + P++ T N+++ CK G +
Sbjct: 451 -GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A++L GL+ + + Y L+ C G
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 88/242 (36%), Gaps = 2/242 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIK 234
A F +M QG+ D Y L++ + A ++ + V T +I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
C+ G + E + + G E L+ C + + A + +G P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
Y I GL + G LD A E + G P+ YN+++ L + + + L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
+ + D VT ++ +CK G D A E+ GL P + + L+ C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 415 DG 416
G
Sbjct: 574 HG 575
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 3/215 (1%)
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
V D++ FD++ + G + V +V + L G L E ++ G L
Sbjct: 153 VTDSFVQFFDLLVYTYKDWGSDPRVFDVF-FQVLVDFGLLREARRVFEKMLNYGLVLSVD 211
Query: 263 EVN-FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
N +L + D + A+ + REF G +Y + I + + GR+ EA
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ +GY P + Y+T++ R L+ V+ L+ M P+ +++ C++
Sbjct: 272 -MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A E +S + G+ P+ + Y LI C G
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 8/254 (3%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ G + K + A L ++R +G+ LD Y++L+N + + +++
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G + + T +I LC++ + E + +VG G + +N L+ C +
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
RA L++E P + Y +RGL G+ +EA E + + G P H+ YNTL
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK-RRGIKPDHISYNTL 543
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTL---PDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
I ++ D + M +E +L P ++T NA+L K ++A EL
Sbjct: 544 ISGY---SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 396 FGLSPNHMAYKYLI 409
G+ PN ++ +I
Sbjct: 601 EGIVPNDSSFCSVI 614
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVRE 286
VT +++ +GR+E ++ + G + N ++ +C+ R A E++RE
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLRE 317
Query: 287 FGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLREN 346
G P +Y + IRG G L+ A + R + +G VP+ YNTLI L EN
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY-RDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 347 RLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYK 406
++ L+ ++ E + D VT N ++ +C+ G A A L+ G+ P Y
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 407 YLILTLC 413
LI LC
Sbjct: 437 SLIYVLC 443
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TLV G+++ G+ + A + +M+ +G D Y+ +L+ + N A +V+
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC--NEGRASEVLREMKE 320
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
V+ I+I+ G LE AY + +V G N L+ L N+ E
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A L+RE G Y + I G + G +A + ++G P+ Y +LI
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSLI 439
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
L R+N+ + L + PD+V MN ++ C +G D A L ++
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 400 PNHMAYKYLILTLCWDG 416
P+ + Y L+ LC +G
Sbjct: 500 PDDVTYNCLMRGLCGEG 516
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 2/251 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L+ G + G ++A +M QG+ + Y+ L++ L +N A +++ +IR
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 220 RKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG VT I+I C+ G ++ A + ++ G + L+ VLC N+
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A EL + G P + G G +D A ++ D P V YN L
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE-MDMMSINPDDVTYNCL 508
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ L E + + L+ +M PD ++ N ++ + K G A + G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 399 SPNHMAYKYLI 409
+P + Y L+
Sbjct: 569 NPTLLTYNALL 579
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 14/247 (5%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
L F ++ + R V + L+ GY + K D+AL LF +M+ +G + + ++ L+
Sbjct: 213 LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 202 L-----VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSG 256
+E+ + A+++I R S T I++ LC++GR+++ + L+
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRF----SEATCEILVDGLCREGRVDDACGLVLDLLN-- 326
Query: 257 KELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDE 314
K + SE ++ LV LC N+ RA+E++ E G P A + GL + GR ++
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 315 ALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
A F +K + G +P V +N L+ L + D L + + PD T + ++
Sbjct: 387 ASGFM-EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Query: 375 CFFCKLG 381
F K G
Sbjct: 446 SGFTKEG 452
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 6/272 (2%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L D +++ G+ V ++T+V GY +G D AL + +M + D +++L+
Sbjct: 178 LAFDTMKRLIDGKPN--VGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILI 235
Query: 200 NSLVEDN-YQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGK 257
N + + A D+ +++ KG E +V + +I+ G++EE ++ G
Sbjct: 236 NGYCRSSKFDLALDLF-REMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGC 294
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
+ LV LC R + A LV + P E YG + L + A+E
Sbjct: 295 RFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAME 354
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+ +G P + TL+ L + R + M LPD VT N +L
Sbjct: 355 MMEELW-KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
C + A L S G P+ Y L+
Sbjct: 414 CSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 20/305 (6%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
+T++ + L A L + RG + V + +V + AG + A F +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 183 MRFQGLDLDGFGYHVLLNS-LVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
MR G + Y L+++ L A ++ + + VT +I CK G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNF-----------------LVGVLCDSNRFERAVELV 284
+E+ + GS K++ ++ F L+ C S+R E A +L+
Sbjct: 604 VEKACQIFERMCGS-KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
G P + Y I GL + G+LDEA E + + G+ + Y++LI R +
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE-VKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
R + +L M E P++V ++ CK+G D A +L + G PN +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 405 YKYLI 409
Y +I
Sbjct: 782 YTAMI 786
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 12/242 (4%)
Query: 158 RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQ 217
+ ++LV Y +G A L KM G Y++L+ S+ D D++
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL--D 430
Query: 218 IRRKGYESHVTNVIVI---------KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ K Y + +V+ + LC G+ E+ + + ++G G S + ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
LC++++ E A L E G Y + + + G +++A ++F + R+ G
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV-GC 549
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ V Y LI L+ +++ L M LP++VT +A++ CK G + A +
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 389 LY 390
++
Sbjct: 610 IF 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 21/248 (8%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-T 228
AGK + A + +M QG D Y +LN L + ++ +++R G + V T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFG 288
I++ CK G +E+ + N + G + L+ + + A EL
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 289 TSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRL 348
+ G P Y I G + G++++A + F + S+ VP
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD-VPDV---------------- 623
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
D+Y+ D N P++VT A+L FCK + A +L + S G PN + Y L
Sbjct: 624 -DMYFKQYDDNSE--RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 409 ILTLCWDG 416
I LC G
Sbjct: 681 IDGLCKVG 688
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 43/331 (12%)
Query: 86 EPFVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFL 145
E V+ VL ++S FF WAGRQ + HT + A+ ++ R + +FL
Sbjct: 132 ESLVIEVLRLIARPSAVIS---FFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED 205
++ F + LV + G IAL G+++ F +
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK-------DFRFR--------- 232
Query: 206 NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVN 265
S T +I+ K RL+ + + + G +
Sbjct: 233 ------------------PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
LC ++ A+ LV T P Y I GL +EA++F + R +
Sbjct: 275 CFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-A 330
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLL-MDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+P+ V Y+TL+C L + +L +L M M E C P N+++ +C G
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC-YPSPKIFNSLVHAYCTSGDHS 389
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLCWD 415
A +L + G P ++ Y LI ++C D
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGD 420
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 4/252 (1%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F T T++++ + K + L L K V + ++ G GK D A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
L M +G + Y +++ + + +++ + ++VT ++I H
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
CK G L+ L + + H + ++ + F ++ L+ E G + P
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 882
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRD-SEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
+ Y L I L++ RL+ AL + S V YN+LI L N++ + L
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 356 MDMNETCTLPDM 367
+M + +P+M
Sbjct: 943 SEMTKKGVIPEM 954
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 111/296 (37%), Gaps = 16/296 (5%)
Query: 132 LSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLD 191
L A L +DFL + V + TL+ G + + M +G
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC--- 368
Query: 192 GFGYHVLLNSLV-----EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR----- 241
+ + NSLV ++ A+ ++ ++ +V I+I +C
Sbjct: 369 -YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 242 -LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYG 300
L+ E + ++ +G L+ V+ LC + ++E+A ++RE G P + Y
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 301 LWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNE 360
+ L +++ A F + + G V Y ++ + + +M E
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 361 TCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
P++VT A++ + K A EL+ + G PN + Y LI C G
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF-SRGRVTHKVRFHDTLVV 165
+FF WA + F H T+ ++ IL++ + ++ L + ++G +T + +
Sbjct: 180 RFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMK 237
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES 225
+A A + A+ +F M+ + + LL+SL V+ ++++ + +
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 297
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
+T +++ C+ L E N ++ G + N ++ L S + A++L
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 357
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
+ G P +Y + IR + ++ A+E+F DS G P Y LI +
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQ 416
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
+L+ VY LL +M E PD T NA++ M + +Y+ Q + P+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 4/296 (1%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF-SRGRVTHKVRFHDTLVV 165
+FF WA + F H T+ ++ IL++ + ++ L + ++G +T + +
Sbjct: 179 RFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET--FTIAMK 236
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES 225
+A A + A+ +F M+ + + LL+SL V+ ++++ + +
Sbjct: 237 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 296
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
+T +++ C+ L E N ++ G + N ++ L S + A++L
Sbjct: 297 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 356
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
+ G P +Y + IR + ++ A+E+F DS G P Y LI +
Sbjct: 357 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQ 415
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
+L+ VY LL +M E PD T NA++ M + +Y+ Q + P+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 5/308 (1%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVG 166
+FF W+ +Q + H+ + + ++ + L+ D + + ++ + V ++
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLN-VETFCIVMRK 177
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYES 225
YA A K D A++ F M L + ++ LL++L + N + A +V N +R +
Sbjct: 178 YARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN-MRDRFTPD 236
Query: 226 HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
T I+++ K+ L + ++ +G + +V +LC + R + A+ +VR
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
S P Y + + RL+EA++ F + S G +N+LI +
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS-GMKADVAVFNSLIGAFCKA 355
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
NR+ +VY +L +M P+ + N +L + G D A +++ + P+ Y
Sbjct: 356 NRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTY 414
Query: 406 KYLILTLC 413
+I C
Sbjct: 415 TMVIKMFC 422
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 3/261 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
RG V +V + +TL+ G K D A +M +GL D + Y +L+ L N
Sbjct: 534 RGCVMDRVSY-NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 210 AFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ +R G V T ++I CK R EE + + + ++ + + N L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
C S R A+EL + G P Y I+G+ R++EA F + R EG
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGL 711
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ Y LI + ++ V LL +M+ P+ +T ++ + + G A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 389 LYSSRSQFGLSPNHMAYKYLI 409
L + + G+ P+ + YK I
Sbjct: 772 LLNEMREKGIVPDSITYKEFI 792
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 6/260 (2%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQI 218
++TL+ GY G+ D A L +M G +++ + ++ L + +A + +
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R +I LCK G+ + + G + N L+ LC++ + +
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVPSHVRYN 336
A + +E G +Y I G +LDEA F + KR G P + Y+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR---GLKPDNYTYS 579
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
LIC L N++ + D LPD+ T + ++ CK + E +
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 397 GLSPNHMAYKYLILTLCWDG 416
+ PN + Y +LI C G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSG 659
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ C + E AV+L + +G P + I GL GR DEA F++K G
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERG 325
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P+ + Y+ L+ L R R+ D Y++L +M + P+++ N ++ F + G + A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
E+ GLS Y LI C +G
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 3/261 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
RG V +V + +TL+ G K D A +M +GL D + Y +L+ L N
Sbjct: 534 RGCVMDRVSY-NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 210 AFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+ +R G V T ++I CK R EE + + + ++ + + N L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
C S R A+EL + G P Y I+G+ R++EA F + R EG
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGL 711
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
P+ Y LI + ++ V LL +M+ P+ +T ++ + + G A
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 389 LYSSRSQFGLSPNHMAYKYLI 409
L + + G+ P+ + YK I
Sbjct: 772 LLNEMREKGIVPDSITYKEFI 792
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 6/260 (2%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQI 218
++TL+ GY G+ D A L +M G +++ + ++ L + +A + +
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R +I LCK G+ + + G + N L+ LC++ + +
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVPSHVRYN 336
A + +E G +Y I G +LDEA F + KR G P + Y+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR---GLKPDNYTYS 579
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
LIC L N++ + D LPD+ T + ++ CK + E +
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 397 GLSPNHMAYKYLILTLCWDG 416
+ PN + Y +LI C G
Sbjct: 640 NVQPNTVVYNHLIRAYCRSG 659
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ C + E AV+L + +G P + I GL GR DEA F++K G
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERG 325
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P+ + Y+ L+ L R R+ D Y++L +M + P+++ N ++ F + G + A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
E+ GLS Y LI C +G
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 45/369 (12%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPL-----IL 142
+ RVL+ G G++ +FF WA +QPR+ H+ + ++ +ILS K+R ++
Sbjct: 115 LIERVLNRCGDAGNL--GYRFFVWAAKQPRYCHSIEVYKSMVKILS--KMRQFGAVWGLI 170
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
+ +RK + + ++ LV +A A A+ + +M G + D + + LL++L
Sbjct: 171 EEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDAL 228
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + +R + + ++ C+ G++ E + L + +G E
Sbjct: 229 CKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIV 288
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
+ L+ ++ + A +L+R+ G P N Y + I+ L + R++EA++ F +
Sbjct: 289 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 323 RDSE----------------------------------GYVPSHVRYNTLICRLLRENRL 348
E G +PS + Y ++ ++
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
+ L+ M + PD+ N V+ CKLG A+ L++ + GLSP + +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 409 ILTLCWDGC 417
I L GC
Sbjct: 469 INGLASQGC 477
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 3/269 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
R + + + + L+ G GK + AL L G M G + D Y+ L+ + N N
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 210 AFDVIANQIRRKGYESH--VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ ++ S VT +I CK G++ E + L+ ++ G N L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
V + A E+ + + G FP + I G R G++ + + ++ ++ G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW-EEMNARG 377
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P+ Y+ LI L ENRL LL + +P N V+ FCK G + A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ + P+ + + LI+ C G
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 42/319 (13%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVG 166
+F++++ + H+ T+ + R L +A L L V+ R LV
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHV--LLNSLVE-DNYQNAFDVIANQIRRKGY 223
+A GK LH + Q +++G V LLN+LV+ D ++A + +R +
Sbjct: 148 FAEKGK----LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 224 ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVEL 283
T I+I+ LC G+ E+A+EL
Sbjct: 204 NDTKTFNILIRGLCGVGKA-----------------------------------EKALEL 228
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
+ G P Y I+G + L++A E F+ + P V Y ++I
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+ ++ + LL DM P VT N ++ + K G A E+ FG P+ +
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 404 AYKYLILTLCWDGCPSGPF 422
+ LI C G S F
Sbjct: 349 TFTSLIDGYCRVGQVSQGF 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVI-ANQI 218
+ +++ GY AGK A L M L L + +V N LV D Y A +++ A +I
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDM----LRLGIYPTNVTFNVLV-DGYAKAGEMLTAEEI 334
Query: 219 RRK-----GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCD 273
R K + VT +I C+ G++ + + G + + L+ LC+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
NR +A EL+ + + P Y I G + G+++EA ++ + + P +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA-NVIVEEMEKKKCKPDKI 453
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
+ LI + R+ + + M PD +T++++L K GMA A L
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 3/269 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
R + + + + L+ G GK + AL L G M G + D Y+ L+ + N N
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 210 AFDVIANQIRRKGYESH--VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ ++ S VT +I CK G++ E + L+ ++ G N L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
V + A E+ + + G FP + I G R G++ + + ++ ++ G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW-EEMNARG 377
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P+ Y+ LI L ENRL LL + +P N V+ FCK G + A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ + P+ + + LI+ C G
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 42/319 (13%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVG 166
+F++++ + H+ T+ + R L +A L L V+ R LV
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 167 YAIAGKPDIALHLFGKMRFQGLDLDGFGYHV--LLNSLVE-DNYQNAFDVIANQIRRKGY 223
+A GK LH + Q +++G V LLN+LV+ D ++A + +R +
Sbjct: 148 FAEKGK----LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 224 ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVEL 283
T I+I+ LC G+ E+A+EL
Sbjct: 204 NDTKTFNILIRGLCGVGKA-----------------------------------EKALEL 228
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
+ G P Y I+G + L++A E F+ + P V Y ++I
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+ ++ + LL DM P VT N ++ + K G A E+ FG P+ +
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 404 AYKYLILTLCWDGCPSGPF 422
+ LI C G S F
Sbjct: 349 TFTSLIDGYCRVGQVSQGF 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVI-ANQI 218
+ +++ GY AGK A L M L L + +V N LV D Y A +++ A +I
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDM----LRLGIYPTNVTFNVLV-DGYAKAGEMLTAEEI 334
Query: 219 RRK-----GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCD 273
R K + VT +I C+ G++ + + G + + L+ LC+
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
NR +A EL+ + + P Y I G + G+++EA ++ + + P +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA-NVIVEEMEKKKCKPDKI 453
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
+ LI + R+ + + M PD +T++++L K GMA A L
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 115/255 (45%), Gaps = 6/255 (2%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
T++ G G + AL+L KM + Y+ +++ L +D + + ++ K
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 222 G-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFE 278
G + +T +I C+ GR + E L ++ ++++ V F L+ L +
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE--RQINPDVVTFSALINALVKEGKVS 163
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A E+ + G FP Y I G + RL++A S+ P V ++TL
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML-DSMASKSCSPDVVTFSTL 222
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + R+++ + +M+ + + VT ++ FC++G D A +L + G+
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 399 SPNHMAYKYLILTLC 413
+PN++ ++ ++ +LC
Sbjct: 283 APNYITFQSMLASLC 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 36/234 (15%)
Query: 218 IRRKGYESHVTNVIVIKHLCKQG----------RLEEV---------EAYLNGLVGSGKE 258
+ R E H +I LCK G ++EE A ++ L G
Sbjct: 33 VDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHH 92
Query: 259 LHGSEV----------------NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLW 302
+H + + ++ C S R+ A +L+R+ P +
Sbjct: 93 IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Query: 303 IRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETC 362
I LV+ G++ EA E + G P+ + YN++I +++RLND +L M
Sbjct: 153 INALVKEGKVSEAEEIYGDML-RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 363 TLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
PD+VT + ++ +CK D +E++ + G+ N + Y LI C G
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVRE 286
VT ++ LC +GR+ + A ++ +V G + +G+ +N LC E A+ L+ +
Sbjct: 11 VTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIING----LCKMGDTESALNLLSK 66
Query: 287 FGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLREN 346
+ Y I L + G A F + D +G P + Y+ +I R
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIFPDVITYSGMIDSFCRSG 125
Query: 347 RLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYK 406
R D LL DM E PD+VT +A++ K G A E+Y + G+ P + Y
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 407 YLILTLC 413
+I C
Sbjct: 186 SMIDGFC 192
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ LC R +A+ LV G P YG I GL + G + AL + E
Sbjct: 16 LMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKME--E 69
Query: 327 GYVPSHVR-YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
++ +HV YN +I RL ++ L +M++ PD++T + ++ FC+ G
Sbjct: 70 THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTD 129
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A +L + ++P+ + + LI L +G
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEG 160
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 2/258 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQI 218
++TL+ G + +G+ A L M + +D + + L+++ V E N A ++ I
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
RR + T +I C G L + + + +V G N L+ C S R E
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
++L E G Y I G + G+L+ A + F + D G P V YN L
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNIL 400
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ L ++ ++ D+ ++ D++T N ++ C+ A L+ S ++ G+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 399 SPNHMAYKYLILTLCWDG 416
P+ +AY +I LC G
Sbjct: 461 KPDAIAYITMISGLCRKG 478
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ G+ + + + + LF +M +QGL D F Y+ L++ + N + N++
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 220 RKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G VT I++ LC G++E+ + L S ++ N ++ LC +++ +
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
A L R G P AY I GL R G EA + R+ ++ +G++PS Y+
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE-DGFMPSERIYD 503
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ C NRF+ AV LV G P Y I GL + L+ ALE F + +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF-YCMEKK 213
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
G V YNTLI L R D LL DM + P+++ A++ F K G A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 387 LELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
LY + + PN Y LI C GC
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 9/235 (3%)
Query: 190 LDGFG-------YHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
+DGFG Y+ ++N L ++ + NA +V ++ VT +I L GR
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
+ L +V + + L+ A L +E P Y
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I G G L +A F S+G P V YNTLI + R+ D L +M
Sbjct: 295 LINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ D T N ++ +C+ G +VA ++++ G+SP+ + Y L+ LC +G
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 107/271 (39%), Gaps = 18/271 (6%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
LR + ++ V F L+ + G A +L+ +M + + + F Y+ L+N
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 204 E----DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE-----VEAYLNGLVG 254
+ + FD++ + + + VT +I CK R+E+ E GLVG
Sbjct: 301 IHGCLGDAKYMFDLM---VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 255 SGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDE 314
N L+ C + + A ++ G P Y + + L G++++
Sbjct: 358 DA-----FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 315 ALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
AL + SE V + YN +I L R ++L + + L + PD + ++
Sbjct: 413 ALVMVEDLQKSEMDVDI-ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 375 CFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
C+ G+ A +L + G P+ Y
Sbjct: 472 SGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ GY AGK ++A +F +M G+ D Y++LL+ L + V+ ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+ + + T I+I+ LC+ +L+E L G + ++ LC
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 279 RAVELVREFGTSGSFPLENAYGLWIR 304
A +L R G P E Y +R
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETLR 507
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 136/315 (43%), Gaps = 12/315 (3%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVV 165
L FF F HT TF + R L+ + L++ +++
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES 225
Y G + A+ +F +++ G D Y+ +L++L+ +N ++ ++R G+E
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179
Query: 226 HV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+V T +++K LCK +++ + L + G ++ +C+ + EL
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 239
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
F P+ + Y I GL + A E R+ + +G P+ + Y+TLI L
Sbjct: 240 ERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVE-KGISPNVISYSTLINVLCN 293
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVL--CFFCKLGMADVALELYSSRSQ-FGLSPN 401
++ + L M + P++ T+++++ CF G AL+L++ + FGL PN
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL--RGTTFDALDLWNQMIRGFGLQPN 351
Query: 402 HMAYKYLILTLCWDG 416
+AY L+ C G
Sbjct: 352 VVAYNTLVQGFCSHG 366
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 2/295 (0%)
Query: 124 TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKM 183
+++ + +L + L FL + + + +LV G + G AL L+ +M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 184 -RFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
R GL + Y+ L+ N A V ++ + T +I K+G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
L+ N ++ SG + +V LC ++F+ A L+ P +
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
+I+GL GRLD A + FRQ P+ V YN L+ L + NR+ + Y L ++
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
T N +L C G+ +AL+L G SP+ + +IL C G
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 35/268 (13%)
Query: 179 LFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY-ESHVTNVIVIKHLC 237
++ M+ G + + F Y+VLL +L ++N + + ++ KG V+ VI +C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 238 KQG----------RLEEVEAYLNGLVGSGKELHGSEVNF--------------------L 267
+ G R E V + N L+ + H + F L
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGL--WIRGLVRGGRLDEALEFFRQKRDS 325
+ VLC+S + E A + + G P N Y L ++G G +AL+ + Q
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHP--NIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P+ V YNTL+ + + M E P++ T +++ F K G D
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLC 413
A+ +++ G PN + Y ++ LC
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALC 433
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 11/331 (3%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRK 147
++RVLS G G++ +FF WA +QP + H+ ++ ILS+ + + + +
Sbjct: 99 LIIRVLSRCGDAGNL--GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEE 156
Query: 148 FSRGRVTHKVRFHDTLVV----GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
R T+ L V +A A A+ + +M GL+ D + + LL++L
Sbjct: 157 M---RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC 213
Query: 204 EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
++ + +R K + ++ C++G+L E + L + +G E
Sbjct: 214 KNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 273
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG-GRLDEALEFFRQK 322
L+ + + A +L+ + G P N Y + I+ L R R+DEA+ F +
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE- 332
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
+ G V Y LI + ++ Y +L DM + +P VT ++ K
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ LEL + G P+ + Y +I C
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 11/263 (4%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L+ G AG L L M+ L D Y+ L++ E + Q+
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 220 RKGYES-HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF-----LVGVLCD 273
G ++ VT+ I +K LCK+ + E V + LV ++HG + L+
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV----DMHGFSPDIVTYHTLIKAYLK 428
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
A+E++RE G G + L + +LDEA G++ V
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH-KRGFIVDEV 487
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSR 393
Y TLI RE ++ + +M + P + T N+++ C G ++A+E +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 394 SQFGLSPNHMAYKYLILTLCWDG 416
++ GL P+ + +IL C +G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEG 570
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 10/264 (3%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIAN 216
V +H TL+ Y G AL + +M +G+ ++ + +L++L ++ + + N
Sbjct: 417 VTYH-TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 217 QIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
++G+ VT +I ++ ++E+ + + S N L+G LC
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ E A+E E SG P ++ + I G + GR+++A EF+ + + P +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI-KHSFKPDNYTC 594
Query: 336 NTLICRLLRE---NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSS 392
N L+ L +E + + + L++ E D VT N ++ FCK A +L S
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREV----DTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 393 RSQFGLSPNHMAYKYLILTLCWDG 416
+ GL P+ Y I L DG
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDG 674
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 100/261 (38%), Gaps = 44/261 (16%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
D + Y GKP +AL +F KM L + + LL LV Y ++F + +
Sbjct: 135 DIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV--RYPSSFSISS----- 187
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
+ +V G L+ N LV C + E A
Sbjct: 188 ------------------------AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 281 V----ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
+ +V EF + P Y ++ + + GRL + E + + G VP+ V YN
Sbjct: 224 LGMLERMVSEFKVN---PDNVTYNTILKAMSKKGRLSDLKELLLDMKKN-GLVPNRVTYN 279
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
L+ + L + + ++ M +T LPD+ T N ++ C G LEL +
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 397 GLSPNHMAYKYLILTLCWDGC 417
L P+ + Y LI DGC
Sbjct: 340 KLQPDVVTYNTLI-----DGC 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 116/302 (38%), Gaps = 32/302 (10%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
L+ +R+ + + +T++ K D A +L +G +D Y L+
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 202 LV-EDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
E+ + A ++ + K + T +I LC G+ E + L SG
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
S N ++ C R E+A E E P + + GL + G ++AL FF
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 321 ---QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
++R+ + V YNT+I ++ +L + Y LL +M E PD T N+ +
Sbjct: 616 TLIEEREVDT-----VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 378 C---KLGMADVALELYS--------------------SRSQFGLSPNHMAYKYLILTLCW 414
KL D L+ +S S S+ L+ +AY +I LC
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 415 DG 416
G
Sbjct: 731 RG 732
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
+G+ P Y + I + + G ++ A F + + G VP V YN++I + RL+
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK-FRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
D +M + C PD++T NA++ FCK G + LE Y GL PN ++Y L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 410 LTLCWDG 416
C +G
Sbjct: 375 DAFCKEG 381
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 238 KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLEN 297
K G+ ++V+ + ++G+G N ++ +C E A L E G P
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 298 AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMD 357
Y I G + GRLD+ + FF + +D P + YN LI + +L +
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 358 MNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGC 417
M P++V+ + ++ FCK GM A++ Y + GL PN Y LI C G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 418 PSGPF 422
S F
Sbjct: 418 LSDAF 422
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 5/295 (1%)
Query: 124 TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKM 183
T+ A+ + P+ L+F R+ + V + TLV + G A+ + M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 184 RFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGR 241
R GL + + Y L+++ + N +AF + N++ + G E + VT +I LC R
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFR-LGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
++E E + +G + + N L+ + +RA+EL+ E G P YG
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
+I GL +++ A + ++ G + + Y TL+ + + +LL +M E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ-FGLSPNHMAYKYLILTLCWD 415
+VT ++ CK + A++ ++ S FGL N + +I LC D
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TN 229
G + A LF +M+F+GL D Y+ +++ + + +++ E V T
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
+I CK G+L + + G+G + + + LV C ++A++ +
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P E Y I + G L +A + G + V Y LI L R+
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEWNVVTYTALIDGLCDAERMK 454
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L M+ +P++ + NA++ F K D ALEL + G+ P+ + Y I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 410 LTLC 413
LC
Sbjct: 515 WGLC 518
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 7/284 (2%)
Query: 110 DWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAI 169
D AG P A++ A+ +AK L+ L + + + + T + G
Sbjct: 464 DTAGVIPNL----ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVT 228
K + A + +M+ G+ + Y L+++ + + ++++ E + VT
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGS-GKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
++I LCK + + Y N + G + + + ++ LC N+ E A L +
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G P AY + G + G + EAL R K G + Y +L+ L N+
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALA-LRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
L L +M PD V +VL +LG D A+EL S
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 3/271 (1%)
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
RG V V ++ +++ G+ G+ D + F +M+ + D Y+ L+N +
Sbjct: 291 RGLVPDTVTYN-SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 210 AFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
+++ G + +V + ++ CK+G +++ + + G + L+
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
C A L E G Y I GL R+ EA E F K D+ G
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGV 468
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
+P+ YN LI ++ ++ LL ++ PD++ + C L + A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDGCPS 419
+ + + G+ N + Y L+ G P+
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 2/259 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ LV G + G + +L ++ +GL + F Y LL + ++ + + ++I
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 220 RKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG E + V+ +++ CK+GR ++ A L G + + N L+ LC R+E
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ-KRDSEGYVPSHVRYNT 337
A L+ E P Y + I L GR ++AL+ ++ + + + + YN
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNP 358
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
+I RL +E +++ V L +M P+ T NA+ A + S S
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQ 418
Query: 398 LSPNHMAYKYLILTLCWDG 416
H YK +I +LC G
Sbjct: 419 KCCTHDFYKSVITSLCRKG 437
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 236 LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPL 295
LCK RL++ + +V SG S +LV LC A++LV + G
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 296 ENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
Y +RGL G L+++L+F ++ +G P+ Y+ L+ +E ++ LL
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFV-ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 356 MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWD 415
++ P++V+ N +L FCK G D A+ L+ G N ++Y L+ LC D
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 416 G 416
G
Sbjct: 295 G 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQI 218
++ L+ G+ G+ D A+ LF ++ +G + Y++LL L D ++ A ++A
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKE--LHGSEVNFLVGVLCDSNR 276
S VT I+I L GR E+ L + + + + N ++ LC +
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
+ V+ + E P E Y ++ EA + Q ++ +H Y
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAF-YIIQSLSNKQKCCTHDFYK 427
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
++I L R+ + LL +M PD T +A++ C GM A+E+ S +
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES 487
Query: 397 -GLSPNHMAYKYLILTLC 413
P + +IL LC
Sbjct: 488 ENCKPTVDNFNAMILGLC 505
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 2/256 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
+L+ GY + + A+ LF ++ G + Y L+ L ++ + N + NQ+
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 222 GYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
G +V T ++ LC+ GR + L ++ E + L+ + A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
EL +P YG I GL G LDEA + F + G P+ V Y TLI
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVIYTTLIH 336
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+ R+ D + +M++ + + +T ++ +C +G DVA E+++ S P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 401 NHMAYKYLILTLCWDG 416
+ Y L+ LC +G
Sbjct: 397 DIRTYNVLLDGLCCNG 412
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 2/242 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKH 235
AL LF +M + LL+ + + N + + Q++ G + ++ H
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 236 -LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
+C + +L ++ G E L+ C NR E A+ L + G P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
Y IR L + L+ A+E F Q + G P+ V YN L+ L R D +L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
L DM + P+++T A++ F K+G A ELY+ Q + P+ Y LI LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 415 DG 416
G
Sbjct: 306 YG 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 2/264 (0%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
LR + R+ V L+ + GK A L+ M + D F Y L+N L
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 204 EDNYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + + R G Y + V +I CK R+E+ + G +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
L+ C R + A E+ + + + P Y + + GL G++++AL F
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
R E + + V Y +I + + ++ D + L + P+++T ++ FC+ G+
Sbjct: 425 RKREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 383 ADVALELYSSRSQFGLSPNHMAYK 406
A L+ + G PN YK
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 115/301 (38%), Gaps = 4/301 (1%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F T+ + R L + + ++ + V ++ LV G G+ A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHL 236
L M + ++ + + L+++ V+ A ++ I+ Y T +I L
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
C G L+E + +G + L+ C S R E +++ E G
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR-YNTLICRLLRENRLNDVYYLL 355
Y + I+G GR D A E F Q S P +R YN L+ L ++ +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQM--SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 356 MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWD 415
M + ++VT ++ CKLG + A +L+ S G+ PN + Y +I C
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 416 G 416
G
Sbjct: 482 G 482
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 126/319 (39%), Gaps = 5/319 (1%)
Query: 105 CLKFFDWAGRQPRFNHT--RATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDT 162
L+ FDW +Q + + A I +L + + + V + +
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 163 LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRK 221
L+ +A +G+ A+++F KM G Y+V+LN + N + +++
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 222 GYESHVTNVIVIKHLCKQGRL-EEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
G + CK+G L +E + +G N L+ V S+R + A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
++++ E +G P Y I R G LDEA+E Q + +G P Y TL+
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLS 392
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
R ++ + +M P++ T NA + + G ++++ + GLSP
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 401 NHMAYKYLILTLCWDGCPS 419
+ + + L+ +G S
Sbjct: 453 DIVTWNTLLAVFGQNGMDS 471
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 11/230 (4%)
Query: 190 LDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTN---VIVIKHLCKQGRLEEVE 246
L G G+H + + AFD +++K Y+S + N I+I L K+GR+
Sbjct: 142 LKGLGFHKKFDLALR-----AFDWF---MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
NGL G L L+ +S R+ AV + ++ G P Y + +
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 307 VRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPD 366
+ G + +K S+G P YNTLI R + + + +M D
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYD 313
Query: 367 MVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
VT NA+L + K A+++ + G SP+ + Y LI DG
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 100/273 (36%), Gaps = 35/273 (12%)
Query: 179 LFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLC 237
L KM+ G+ D + Y+ L+ + + +++ G+ VT ++
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 238 KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLEN 297
K R +E LN +V +G N L+ + A+EL + G+ P
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 298 AYGLWIRGLVRGGRLDEALEFFRQKRDSE------------------------------- 326
Y + G R G+++ A+ F + R++
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 327 ---GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
G P V +NTL+ + ++V + +M +P+ T N ++ + + G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ A+ +Y G++P+ Y ++ L G
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 117/326 (35%), Gaps = 6/326 (1%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
+L V G D ++ K AG P R TF + SR + R+
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPE----RETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
VT + ++T++ A G + + + +M + Y LL++
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLC-KQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+A ++ E + + +C K L E E + L G + +N +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
V + +A ++ G P Y + R ++ E R+ ++G
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL-AKG 694
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P + YNT+I R R+ D + +M + +PD++T N + + M + A+
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLC 413
+ + G PN Y ++ C
Sbjct: 755 GVVRYMIKHGCRPNQNTYNSIVDGYC 780
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 160 HDTLVVGYAIAGKPDIA----LHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIA 215
+ T + G + G+ + A L L + G DL V+ E + A VI
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 216 NQIRRKGYESHVTNVI-VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDS 274
++ G+ V + VI CK L E +L+ ++G G +++ V+ ++ C
Sbjct: 308 -EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 275 NRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR 334
+ A+E +EF F Y + L + GR++EA E ++ +D G VP +
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD-RGIVPDVIN 425
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS 394
Y TLI + ++ D L+ +M PD++T N ++ + G + LE+Y
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 395 QFGLSPNHMAYKYLILTLCW 414
G PN + +I LC+
Sbjct: 486 AEGPKPNAVTNSVIIEGLCF 505
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 13/291 (4%)
Query: 122 RATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
R + F LS+ + L++ + V + TL+ GY + GK AL L
Sbjct: 388 RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 182 KMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQG 240
+M G+ D Y+VL++ L + ++ I +++ +G + + VTN ++I+ LC
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 241 RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVE-LVR-EFGTSGSFPLENA 298
+++E E + + L E ++ +F+ G C++ ++A + VR E+ S ++
Sbjct: 508 KVKEAEDFFSSLEQKCPE---NKASFVKG-YCEAGLSKKAYKAFVRLEYPLRKSVYIKLF 563
Query: 299 YGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDM 358
+ L I G L++A + + K + P +I + N + + L M
Sbjct: 564 FSLCIEGY-----LEKAHDVLK-KMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 359 NETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
E +PD+ T ++ +C+L A L+ Q G+ P+ + Y L+
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 160/417 (38%), Gaps = 96/417 (23%)
Query: 91 RVLSHGGGDGDI-LSCLKFFDWAGRQPRFNHTRATFAAIFRILSR----AKLRPLILDFL 145
R+L+ D ++ LS L+ G P N +A + RIL+ KL ++++ +
Sbjct: 61 RLLNSTRDDPNLALSFLRQLKEHGVSPNVN----AYATLVRILTTWGLDIKLDSVLVELI 116
Query: 146 RKFSRG------------------RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQG 187
+ RG R +R LV Y G D A + + +
Sbjct: 117 KNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLD 176
Query: 188 LDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGY-ESHVTNVIVIKHLCKQGRLEEV- 245
+D + L+N + E + Q+++ G + T IV+K LC++G LEE
Sbjct: 177 CVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAA 236
Query: 246 ------------EAYLNGLVGSG---------------KELHGSEVNFLVGVL----CDS 274
+ ++NGL +G K L G ++ ++G++ C+
Sbjct: 237 MLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNE 296
Query: 275 NRFERAVELVREFGTSG-----------------SFPLENAYGLWIRGLVRGGRLD---- 313
+ + A ++ E G + L A G + L +G +++
Sbjct: 297 MKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIV 356
Query: 314 --------------EALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
EALE F++ RD ++ V YN L + R+ + + LL +M
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFL-DRVCYNVAFDALSKLGRVEEAFELLQEMK 415
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ +PD++ ++ +C G AL+L G+SP+ + Y L+ L +G
Sbjct: 416 DRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Query: 228 TNVIVIKHLCK--QGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
T +I++ H C+ + V LN +V +G E + V LC++ R + A +L++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
E S P Y ++ L + L EF + RD P V + LI +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
L + YL+ + PD N ++ FC L A+ +Y + G+ P+ + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 406 KYLILTLCWDG 416
LI L G
Sbjct: 304 NTLIFGLSKAG 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M GL+ D + + SL E A D++ + T ++KHLCK
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAY 299
L V +++ + ++ V+F L+ +C+S A+ LV + G +G P Y
Sbjct: 210 LHVVYEFVDEMRDDF-DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
++G + EA+ +++ ++ EG P + YNTLI L + R+ + L M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 360 ETCTLPDMVTMNAVLCFFCKLG 381
+ PD T +++ C+ G
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 2/228 (0%)
Query: 186 QGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE 244
QGLD + Y L++ E NY +V+ I + S +IK LC + E
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLE 301
Query: 245 VEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIR 304
L G ++ C+ A +L E G P E AY + I
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIH 361
Query: 305 GLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTL 364
G + G + +E F + GY + + NT+I + ++ + + +M+ET
Sbjct: 362 GHFKRGEIS-LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 365 PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
P+ +T NA++ FCK + L+LY GL P+ MAY L+ L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ T++ G+ G A L+ +M +G+ + F Y+V+++ + + + N++
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 220 RKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R GY + + +IK C G+ +E + +G + N L+ C N+ E
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGL 306
+ ++L +E G P AY +R L
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 121/322 (37%), Gaps = 47/322 (14%)
Query: 91 RVLSHGGGDGDILSCLKFFDWAGRQPR-FNHTRATFAAIFRILSRAKLRPLILDFLRKFS 149
R+ +HG L+FF + R + H ++F I +R L P + + +
Sbjct: 65 RLWNHGP------KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 150 RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
R+ + + YA AGKPD A+ LF M G D ++ +L+
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV-------- 170
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
LCK R+E+ L G + N ++
Sbjct: 171 --------------------------LCKSKRVEKAYELFRALRGRF-SVDTVTYNVILN 203
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF--RQKRDSEG 327
C R +A+E+++E G P Y ++G R G++ A EFF +KRD E
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
V V Y T++ + + +M LP + T NA++ CK + A+
Sbjct: 264 DV---VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 388 ELYSSRSQFGLSPNHMAYKYLI 409
++ + G PN Y LI
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLI 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
+ T+V G+ +AG+ A ++F +M +G+ Y+ ++ L + DN +NA V+ ++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV-VMFEEM 326
Query: 219 RRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
R+GYE +VT ++I+ L G E + + G E + N ++ + +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGL 306
E+A+ L + G+ P + Y + I G+
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLEN-AYGLWIRGLVRGGRLDEALEFFRQKR 323
N ++ VLC S R E+A EL R G F ++ Y + + G R +ALE ++
Sbjct: 165 NTILDVLCKSKRVEKAYELFRAL--RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
+ G P+ YNT++ R ++ + ++M + D+VT V+ F G
Sbjct: 223 E-RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLC 413
A ++ + G+ P+ Y +I LC
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLC 311
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 6/237 (2%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVT 228
AG + ++ +M+ + ++ Y++L+N ++ +RR G+ + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFG 288
+I+ CKQG ++ + ++ +G S N + LCD R + A RE
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELL 366
Query: 289 TSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRL 348
+S + P +Y + G ++ G+ EA F R + + PS V YNTLI L L
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH-PSIVTYNTLIDGLCESGNL 425
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
L +M PD++T ++ F K G +A E+Y + G+ P+ AY
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 22/284 (7%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L+ D LR G + + ++TL+ G +G + A L +M Q + D Y L+
Sbjct: 395 LLFDDLRA---GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 200 NSLVEDNYQNAFDVIANQIRRKG-------YESHVTNVIVIKHLCKQGRLEEVEAYLNGL 252
V++ + + +++ RKG Y + + + K RL E +
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE------EM 505
Query: 253 VGSGKELHGSEV---NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG 309
V + + H ++ N + LC +A+E R+ G P Y IRG +
Sbjct: 506 VAT--DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 310 GRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVT 369
G+ A + + Y PS + Y LI + RL + +M + P+++T
Sbjct: 564 GQFKMARNLYDEMLRKRLY-PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 370 MNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
NA+L CK G D A + G+ PN +Y LI C
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 9/280 (3%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+D R+ V ++TL+ GY GK A LF +R + Y+ L++
Sbjct: 359 IDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 202 LVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
L E N + A + + + +T ++K K G L + ++ G +
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 261 G-SEVNFLVGVL--CDSNR-FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEAL 316
G + VG L DS++ F E+V T P Y + I GL + G L +A+
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMV---ATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 317 EFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCF 376
EF R K G VP HV Y T+I L + L +M P ++T ++
Sbjct: 536 EFQR-KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 377 FCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
K G + A + + + G+ PN M + L+ +C G
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 2/270 (0%)
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
+ F + R V ++L+ + G + A +LF +M + ++ D F Y+ LL+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 201 SLVEDNYQN-AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
++ + + AF+++A ++ + V+ VI K GR +E + G L
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
N L+ + R E A++++RE + G Y + G + G+ DE + F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
+ + E +P+ + Y+TLI + + + + D+V +A++ CK
Sbjct: 503 TEMK-REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLI 409
G+ A+ L ++ G+SPN + Y +I
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 35/245 (14%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L + L + R+ V + T++ G+A AG+ D AL+LFG+MR+ G+ LD Y+ LL
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 200 NSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
+ K GR EE L + G +
Sbjct: 452 SIYT----------------------------------KVGRSEEALDILREMASVGIKK 477
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
N L+G +++ ++ E P Y I G +GG EA+E F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
R+ + S G V Y+ LI L + + L+ +M + P++VT N+++ F +
Sbjct: 538 REFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 380 LGMAD 384
D
Sbjct: 597 SATMD 601
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 143/368 (38%), Gaps = 44/368 (11%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFA-AIFRILSRAKLRPLILDFLR 146
+++R L G + + F+++A ++ R + + A A+ L R +
Sbjct: 201 YIIREL---GNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFE 257
Query: 147 KFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN 206
G + V L+ Y +G + A+ +F M+ GL + Y+ ++++ +
Sbjct: 258 TAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG 317
Query: 207 YQNAFDVIA---NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYL-NGLVGSGKELHGS 262
+ F +A ++++R G + + +C +G L E L + + E
Sbjct: 318 ME--FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N L+ +C + + A E++ + P +Y I G + GR DEAL F +
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 323 R----------------------------------DSEGYVPSHVRYNTLICRLLRENRL 348
R S G V YN L+ ++ +
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
++V + +M LP+++T + ++ + K G+ A+E++ GL + + Y L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 409 ILTLCWDG 416
I LC +G
Sbjct: 556 IDALCKNG 563
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 9/330 (2%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
VLR S D L+FF+WA P + T + + + L+ K + L++
Sbjct: 83 VLRATSRSSNDS-----LRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQM 137
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLF-GKMRFQGLDLDGFGYHVLLNSLVE-DN 206
+ ++ Y G D A+ LF G + G Y+ LL++L +
Sbjct: 138 KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKM 197
Query: 207 YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ A+ +I IR+ T I++ C G+++E + +L+ + G +
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ L ++ E A E+V + G P + + I + + G ++ +E +
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL- 316
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
G Y TLI + + ++++ + LL + E P ++ C+ GM D A
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 387 LELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+S PN Y LI T+C G
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLI-TMCGRG 405
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 113/285 (39%), Gaps = 9/285 (3%)
Query: 92 VLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRG 151
++ G +G + ++ F+ + T + ++ L K+ +R+ R
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAF 211
+ R + LV G+ AGK A +M +G + G +L+ L+ Y +
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 212 DVIANQIRRKGYESHVTNV-IVIKHLCKQGRLE-EVEAYLNGLVGSGKELHGSEVNFLVG 269
+ +++ + G+ + I+I+ + K G +E +E Y G + L+
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA-CKLGLCVDIDTYKTLIP 330
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
+ + + A L+ G P + Y I+G+ R G D+A FF + + +
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK-VKAHP 389
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP-----DMVT 369
P+ Y LI R + D L++M E +P DMVT
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVT 434
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 12/290 (4%)
Query: 130 RILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLD 189
RIL R + L K VR + T++ Y+ GK + A+ LF +M+ G
Sbjct: 183 RILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS 242
Query: 190 LDGFGYHVLLNSL--VEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVE 246
Y+V+L+ + +++ V+ +++R KG + T V+ ++G L E +
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
+ L G E N L+ V + + A+ +++E + Y +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 307 VRGGRLDEA---LEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
VR G EA +E +K G +P+ + Y T+I + + ++ L M E
Sbjct: 362 VRAGFSKEAAGVIEMMTKK----GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+P+ T NAVL K ++ +++ G SPN + + L LC
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM-LALC 466
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 22/260 (8%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
+TL+ Y G A ++G+M G + Y+ LLN+L + + + + ++
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 221 KGYESHVTNVIVIKHLCKQG-----------RLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
KG++ T+ ++ +G R++E + + + ++ L NF
Sbjct: 555 KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL----ANFKCR 610
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
L S ERA L ++ G + N+ + R D+A R+ +G
Sbjct: 611 ALAGS---ERAFTLFKKHGYKPDMVIFNS---MLSIFTRNNMYDQAEGILESIRE-DGLS 663
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P V YN+L+ +R +L + ++ PD+V+ N V+ FC+ G+ A+ +
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 390 YSSRSQFGLSPNHMAYKYLI 409
S ++ G+ P Y +
Sbjct: 724 LSEMTERGIRPCIFTYNTFV 743
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 22/349 (6%)
Query: 86 EPFVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNH-TRATFAAIFRILSRAKLRP---LI 141
E + V S G +++ L FF WA +F H R +L+ L+ ++
Sbjct: 92 EQAITVVASLASESGSMVA-LCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVM 150
Query: 142 LDFLRKFSR-GRVTHKV--------------RFHDTLVVGYAIA-GKPDIALHLFGKMRF 185
LR FS GR+ V V+ A+ G + A ++F +M
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 186 QGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEE 244
+G+ D Y +++ D Q A + I+R + T +++ LC+ G +
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 245 VEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIR 304
Y ++ G + + L+ LC ++A E++ E +G P + I
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 305 GLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTL 364
GL + G ++A F + S+ Y P+ Y ++I +E++LN L M E
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 365 PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++ T ++ CK G A EL + G PN Y I +LC
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
FL+ V + +++ GY K + A LF +M+ QGL + Y L+N
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 204 E-DNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
+ ++ A++++ N + +G+ ++ T I LCK+ R E LN G E G
Sbjct: 405 KAGSFGRAYELM-NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
L+ C N +A+ +G + I R ++ E+ F Q
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF-Q 522
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
S G +P+ Y ++I +E ++ +M +PD T +++ CK
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Query: 382 MADVALELYSSRSQFGLSPNH-----MAYKY 407
M D A +LY + GLSP +AY+Y
Sbjct: 583 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 613
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 3/257 (1%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRR 220
+L+ G G A + +M G + + + L++ L + + + AF + +R
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 221 KGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
Y+ +V T +I CK+ +L E + + G + + L+ C + F R
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A EL+ G G P Y I L + R EA E K S G V Y LI
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL-NKAFSCGLEADGVTYTILI 470
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
++N +N MN+T DM N ++ FC+ + L+ GL
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 400 PNHMAYKYLILTLCWDG 416
P Y +I C +G
Sbjct: 531 PTKETYTSMISCYCKEG 547
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 1/199 (0%)
Query: 224 ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVEL 283
++H ++++ + GRL E + + G +N ++ + + E A +
Sbjct: 145 KAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENV 204
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
E G P ++Y L + G R G++ EA + G++P + ++ L
Sbjct: 205 FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWL-TGMIQRGFIPDNATCTLILTALC 263
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+N + M + P+++ +++ CK G A E+ + G PN
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 404 AYKYLILTLCWDGCPSGPF 422
+ LI LC G F
Sbjct: 324 THTALIDGLCKRGWTEKAF 342
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 142/344 (41%), Gaps = 32/344 (9%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLR---P-----------------L 140
D + L F DW R P F H ++A++ +L ++ P
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALF 98
Query: 141 ILDFLRKFSRG---RVTHKV--RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGY 195
++DF R +G + +K+ + ++ L+ A G + L+ +M + D + +
Sbjct: 99 VVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTF 158
Query: 196 HVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVG 254
+ L+N + Y A + I+ + T I C++ ++ +
Sbjct: 159 NTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ 218
Query: 255 SGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
+G H +EV++ L+ L ++ + + A+ L+ + P Y + I L G+
Sbjct: 219 NG--CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQK 276
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNA 372
EA+ F+Q +S G P Y LI + L++ LL M E +P+++T NA
Sbjct: 277 SEAMNLFKQMSES-GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNA 335
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ FCK + A+ L S + L P+ + Y LI C G
Sbjct: 336 LIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 2/297 (0%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
+H T++ R L L L K + + +L+ GY + + A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHL 236
L +M G D F + L++ L N + + +Q+ ++G + VT V+ L
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 237 CKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLE 296
CK+G ++ LN + + + + N ++ LC E AV+L E T G P
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 297 NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y I L GR +A + + P+ V +N LI +E +L + L
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 357 DMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+M + PD +T N ++ FC D A +++ PN Y LI C
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ T+V G G D+AL+L KM + + ++ +++SL + + + ++
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
KG +V T +I LC GR + L+ ++ + N L+ +
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A +L E P Y L I G RLDEA + F+ S+ +P+ YNTL
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV-SKDCLPNIQTYNTL 404
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + R+ D L +M++ + + VT ++ F + G D A ++ +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 399 SPNHMAYKYLILTLCWDG 416
+ M Y L+ LC G
Sbjct: 465 PTDIMTYSILLHGLCSYG 482
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 136/371 (36%), Gaps = 85/371 (22%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L L+ L K R+ V +T++
Sbjct: 218 GCQPDL----VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
++A+ LF +M +G+ + Y+ L+N L + +A +++N + +K + VT
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 232 VIKHLCKQGRLEEVEAY-------------------LNGL-----VGSGKELHGSEV--- 264
+I K+G+L E E +NG + K++ V
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 265 --------NFLVGVLCDSNRFERAVELVREFGTSG------------------------- 291
N L+ C R E VEL RE G
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 292 ---------SFPLE-NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
P + Y + + GL G+LD AL F+ + SE + + YNT+I
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI-YNTMIEG 512
Query: 342 LLRENRLNDVYYLLMDMNETCTL---PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ + ++ + + L C+L PD+VT N ++ C + A +L+ + G
Sbjct: 513 MCKAGKVGEAWDLF------CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 399 SPNHMAYKYLI 409
PN Y LI
Sbjct: 567 LPNSGTYNTLI 577
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIAN 216
++ ++TL+ G+ + + + LF +M +GL + Y ++ + ++ ++
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 217 QIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
Q+ + + ++ H LC G+L+ L S EL+ N ++ +C +
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ A +L F + P Y I GL L EA + FR+ ++ +G +P+ Y
Sbjct: 518 KVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE-DGTLPNSGTY 573
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
NTLI LR+ L+ +M + + D T++ V
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 4/288 (1%)
Query: 123 ATFAAIFRI-LSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
ATF + R+ + +L + F R F G + + TL+ + KP I L LF
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC-TLIDAFCKHMKPTIGLQLFD 590
Query: 182 KMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQG 240
M+ + D +V+++ L + ++A N I K VT +I C
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 241 RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYG 300
RL+E E L + + + L+ VLC +N + A+ + GS P YG
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 301 LWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNE 360
+ + ++ + + F + ++ +G PS V Y+ +I L + R+++ + +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQE-KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 361 TCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
LPD+V ++ +CK+G A LY + G+ P+ + + L
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ TL+ GY AG + LF + +G+ LD + ++ V+ V+ ++
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 220 RKGYESH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+G + VT I+IK LC+ GR+ E ++ G E + L+ C
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
L + G P YG+ + GL + G + A+ F K + + V +N+L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVKMLGQSIRLNVVVFNSL 502
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I R NR ++ + M PD+ T V+ G + AL L+ + GL
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 399 SPNHMAYKYLILTLC 413
P+ +AY LI C
Sbjct: 563 EPDALAYCTLIDAFC 577
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 39/298 (13%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAF 211
++ V + L+ G G+ A ++G++ +G++ Y L++ + N ++ F
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 212 DVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
+ + I+ V +++ L KQG + + ++G L+ N L+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEAL-EFFRQKRDSEGYVP 330
C NRF+ A+++ R G G P + +R + GRL+EAL FFR + G P
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK--MGLEP 564
Query: 331 SHVRYNTLI---CR--------------------------------LLRENRLNDVYYLL 355
+ Y TLI C+ L + +R+ D
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 356 MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
++ E PD+VT N ++C +C L D A ++ PN + LI LC
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 2/249 (0%)
Query: 169 IAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVT 228
+ G+ + AL LF +M GL+ D Y L+++ + + + ++R + +
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 229 NVIVIKHLC-KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
V+ HL K R+E+ + N L+ E N ++ C R + A +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
+ P + I L + +D A+ F + +G P+ V Y L+ +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVD 721
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
+ + L +M E P +V+ + ++ CK G D A ++ L P+ +AY
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Query: 408 LILTLCWDG 416
LI C G
Sbjct: 782 LIRGYCKVG 790
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Query: 228 TNVIVIKHLCK--QGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVR 285
T +I++ H C+ + V LN +V +G E + V LC++ R + A +L++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 286 EFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
E S P Y ++ L + L EF + RD P V + LI +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
L + YL+ + PD N ++ FC L A+ +Y + G+ P+ + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 406 KYLILTLCWDG 416
LI L G
Sbjct: 304 NTLIFGLSKAG 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 5/234 (2%)
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M GL+ D + + SL E A D++ + T ++KHLCK
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAY 299
L V +++ + ++ V+F L+ +C+S A+ LV + G +G P Y
Sbjct: 210 LHVVYEFVDEMRDDF-DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
++G + EA+ +++ ++ EG P + YNTLI L + R+ + L M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ PD T +++ C+ G + AL L G +PN Y L+ LC
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 125/318 (39%), Gaps = 29/318 (9%)
Query: 115 QPRFNHTRATFAAIFRILSRAKLRPL-----ILDFLRKFSRGRVTHKVRFHDTLVVGYAI 169
QP F R+TF + RA + +L+ + + G +V D V
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM--VNNGLEPDQVT-TDIAVRSLCE 171
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-----------DNYQNAFDVIANQI 218
G+ D A L ++ + D + Y+ LL L + D ++ FDV +
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL- 230
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
V+ I+I ++C L E ++ L +G + N ++ C ++
Sbjct: 231 --------VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
AV + ++ G P + Y I GL + GR++EA + + D+ GY P Y +L
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA-GYEPDTATYTSL 341
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ + R+ LL +M P+ T N +L CK + D +ELY G+
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 399 SPNHMAYKYLILTLCWDG 416
Y L+ +L G
Sbjct: 402 KLESNGYATLVRSLVKSG 419
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES-HVTNVIVIK 234
A++L K+ G D F Y+ ++ + + + +++ +G E +T +I
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
L K GR+EE YL +V +G E + L+ +C A+ L+ E G P
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAP 368
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
+ Y + GL + +D+ +E + + S + S+ Y TL+ L++ ++ + Y
Sbjct: 369 NDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN-GYATLVRSLVKSGKVAEAY 425
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
++T++ G+ K A+ ++ KM+ +G++ D Y+ L+ L + + +
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 219 RRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
GYE T ++ +C++G + L + G + N L+ LC +
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
++ +EL +SG N Y +R LV+ G++ EA E F DS+ + Y+T
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASA-YST 445
Query: 338 L 338
L
Sbjct: 446 L 446
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 143/375 (38%), Gaps = 76/375 (20%)
Query: 113 GRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGK 172
G QP T+ + L + L L L+K +G++ V ++T++ G
Sbjct: 218 GCQPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 173 PDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVI 231
D AL+LF +M +G+ D F Y L++ L + +A ++++ I RK + VT
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 232 VIKHLCKQGRLEEVE-------------------AYLNGLVGSGK--------ELHGSEV 264
+I K+G+L E E + +NG + EL S+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 265 NF--------LVGVLCDSNRFERAVELVREFGTSG-----------------SFPLENA- 298
F L+ C + R E +EL RE G + +NA
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 299 -----------------YGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
Y + + GL + G+L +A+ F + S P YN +I
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEG 512
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
+ + ++ D + L +++ P+++ N ++ FC+ G + A L + G PN
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 402 HMAYKYLILTLCWDG 416
Y LI DG
Sbjct: 573 SGTYNTLIRARLRDG 587
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 138/326 (42%), Gaps = 10/326 (3%)
Query: 98 GDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLI-----LDFLRKFSRGR 152
G G+ + FF+ G + + A+ + +R + R +L +I +D + R
Sbjct: 20 GIGNPPTVPSFFNLCGSGC-WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSR 78
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFD 212
+ + L+ A K ++ + L +M+ G+ D + Y + +N + +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 213 VIANQIRRKGYESHVTNVI-VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVL 271
+ ++ + GYE + + ++ C R+ + A ++ +V G + L+ L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 272 CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPS 331
N+ AV LV + G P YG + GL + G +D AL K+ +G + +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL--KKMEKGKIEA 256
Query: 332 HVR-YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELY 390
V YNT+I L + ++D L +M+ PD+ T ++++ C G A L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 391 SSRSQFGLSPNHMAYKYLILTLCWDG 416
S + ++PN + + LI +G
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEG 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFS-RGRVTHKVRFHDTLVVGYAIAGKPDIALHLFG 181
T++ + + +AK ++ R+ S RG V + V + TL+ G+ A D A +F
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT-TLIHGFFQARDCDNAQMVFK 457
Query: 182 KMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQG 240
+M G+ + Y++LL+ L ++ V+ ++R E + T I+I+ +CK G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 241 RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYG 300
++E+ L G + N ++ C E A L+++ G P Y
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 301 LWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
IR +R G + + E ++ R S G+ L+ +L + RL+ +
Sbjct: 578 TLIRARLRDGDREASAELIKEMR-SCGFAGDASTIG-LVTNMLHDGRLDKSF 627
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 2/242 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIK 234
AL ++ +M + + D Y+V++ L N A+ + + ++R T +I
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
LCK+G+ +E + G ++ LC RA E + S P
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
+ + I G R G AL S G P+ N LI ++ RL D +++
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLML-SYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCW 414
+M T PD T N +L C LG +A +LY + G P+ + Y L+ LCW
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 415 DG 416
G
Sbjct: 523 KG 524
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
HLC + + + Y KE + N L +L S +R L + SF
Sbjct: 65 HLCTEKWFSDQKDY------DQKEDPEAIFNVLDYILKSS--LDRLASLRESVCQTKSFD 116
Query: 295 LENAYGL---WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
++ + +R L G+LD AL + R+K G +P + +N L+ L + +
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAAL-WLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKA 175
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
L+ +M E P+ V+ N ++ C + D AL L+++ +++G+ PN + ++
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 412 LCWDG 416
LC G
Sbjct: 236 LCQKG 240
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+++ LC QG+L+ ++ SG N L+ LC + E+A LVRE G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE----NR 347
P +Y I+GL +D+AL F + G P+ V N ++ L ++ N
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLF-NTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVL--CFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
+ ++D ++ D+V ++ CF K G ALE++ SQ + + + Y
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCF--KNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 406 KYLILTLCWDG 416
+I LC G
Sbjct: 304 NVIIRGLCSSG 314
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 19/316 (6%)
Query: 107 KFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFL---RKFSRGRVTHKVRFHDTL 163
+FF WA R P F H+ ++ + IL +K L+ DFL R+++ ++ KV + +
Sbjct: 87 RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFW--IV 144
Query: 164 VVGYAIAGKPDIALHLFGKMRFQGL-----DLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
Y+ A P A F +M G+ DLD LL+SL + + N +
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQ-----LLHSLCDKKHVNHAQEFFGKA 199
Query: 219 RRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
+ G S T I+++ + + ++ + N L+ LC S
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF-RQKRDSEGYVPSHVRYN 336
+ ++ +E G G P ++ ++I G + A + R KR VP+ +N
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR--YDLVPNVYTFN 317
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
+I L + +++D Y LL +M + PD T N+++ + C + A +L S +
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT 377
Query: 397 GLSPNHMAYKYLILTL 412
P+ Y ++ L
Sbjct: 378 KCLPDRHTYNMVLKLL 393
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQI 218
++ L+ +G D +F +M GL D + + + +++ + + +A+ V+
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
R + T +IK LCK ++++ L+ ++ G N ++ CD
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
RA +L+ + P + Y + ++ L+R GR D A E + + + Y P+ Y +
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY-PTVATYTVM 424
Query: 339 ICRLLREN 346
I L+R+
Sbjct: 425 IHGLVRKK 432
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 123/326 (37%), Gaps = 4/326 (1%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
+LR LS KFF W G Q F HT + + +I + + + +
Sbjct: 119 ILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEM 178
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
+ + L+ AG + F K + Y+ +L+SL+
Sbjct: 179 IKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQY 238
Query: 209 NAFDVIANQIRRKGYESHVT--NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
D + Q+ G+ V N+++ + + G+ + + L+ +V G N
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANF-RLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ L N+ A+ L+ G P + I GL R G+L EA ++F +
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKV 356
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
G P V Y +I + L + +M E LP++ T N+++ FC G A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 387 LELYSSRSQFGLSPNHMAYKYLILTL 412
L G +PN + Y L+ L
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNL 442
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 9/321 (2%)
Query: 99 DGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGR-VTHKV 157
D +I ++FF WAG++ F H +T+ + R L A+L + +++ R V+
Sbjct: 103 DVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP 162
Query: 158 RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQ 217
LV A AL +F + + + Y+ ++ L+++ + +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 218 IRRKG--YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ +G + +T +I K GR + + + + + L+G+
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK-RDSEGYVPSHVR 334
+ E+A++L E +G P Y I+GL + GR+DEA F++ RD G P V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD--GLTPDVVF 340
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL--CFFCKLGMADVALELYSS 392
N L+ L + R+ ++ + +M P +V+ N V+ F K +++V+ +
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS-SWFDK 399
Query: 393 RSQFGLSPNHMAYKYLILTLC 413
+SP+ Y LI C
Sbjct: 400 MKADSVSPSEFTYSILIDGYC 420
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 120/304 (39%), Gaps = 36/304 (11%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
LD + R + V + L+ G AG+ D A + M GL D + L+N
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 202 LVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCK-QGRLEEVEAYLNGLVGSGKEL 259
L + + +V + + + V+ VIK L + + + EV ++ + +
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
+ L+ C +NR E+A+ L+ E G P AY I L + R + A E F
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 320 RQKRDSEGYVPSHV----------------------------------RYNTLICRLLRE 345
++ +++ G V S V YN L+ +++
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
+N+ LL M E D+ + N +L F + G+ A+E++ + G+ P+ + Y
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 406 KYLI 409
L+
Sbjct: 588 NTLL 591
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ L+ GY + + AL L +M +G Y L+N+L + A + + +++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 220 RK-GYESHVTNVIVIKHLCKQGRLEEVEAYLNGL--VGSGKELHGSEVNFLVGVLCDSNR 276
G S ++IKH K G+L E N + GSG +++ N L+ + +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA--YNALMSGMVKAGM 529
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
A L+R+ +G N++ + + G R G A+E F + S G P V YN
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS-GIKPDGVTYN 588
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
TL+ + ++ +M + D +T +++L
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 4/269 (1%)
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED 205
R+ ++G V ++V ++T++ GY G A M QG+ D Y+ L+ E
Sbjct: 379 REMAKGLVPNEV-IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 206 NYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV 264
+ N+++ KG V T I+I ++ ++ L + +G +
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
L+ LC ++ A + R+ G P Y + I G G++++A F ++
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML- 556
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+G + V YNTLI L +L++ LL++++ PD+ T N+++ + G
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ LY + G+ P Y +L+++LC
Sbjct: 617 RCIALYEEMKRSGIKPTLKTY-HLLISLC 644
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYES----- 225
GK + A + G+ +GL V+ N+++ D Y D++ +++ + E
Sbjct: 368 GKIEKAEEILGREMAKGL----VPNEVIYNTMI-DGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 226 -HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
H+ +I+ C+ G +E E +N + G N L+G F++ +++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+E +G+ P +YG I L +G +L EA + ++ + G P YN LI
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
+ ++ D + +M + ++VT N ++ G A +L S+ GL P+
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 405 YKYLI 409
Y LI
Sbjct: 602 YNSLI 606
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 2/252 (0%)
Query: 166 GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNYQNAFDVIANQIRRKGYE 224
GY+ K + AL ++ G+ ++ + +LLN+L E + A +++ ++ +
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+ V +I C++G L + + G + N L+ C+ E A + V
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+ G P Y + I G R D+ + ++ D+ G +P+ V Y TLI L +
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN-GTMPNVVSYGTLINCLCK 506
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
++L + + DM + P + N ++ C G + A + G+ N +
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 405 YKYLILTLCWDG 416
Y LI L G
Sbjct: 567 YNTLIDGLSMTG 578
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 2/255 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ GY AG P+ + + +M+ ++ ++ LL L + + + +++
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
G+ T I+ + E V SG +++ + L+ LC + E
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+A E++ G P E Y I G R G L A + + +G P H+ YN L
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCL 430
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I R + + + M P + T N ++ + + D ++ G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 399 SPNHMAYKYLILTLC 413
PN ++Y LI LC
Sbjct: 491 MPNVVSYGTLINCLC 505
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 1/152 (0%)
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
N L+ LC R A +L E P Y I G + G +++ + R++
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV-RERMK 276
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
++ PS + +NTL+ L + + D +L +M + +PD T + + + A+
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
AL +Y + G+ N L+ LC +G
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 11/305 (3%)
Query: 115 QPRFNHTRATFAAIFRILSRA----KLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIA 170
+P + A+ + SR+ K + L+ D +R+ RG V + F+ TL+ +
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELV-DAMRQ--RGCVPDLISFN-TLINARLKS 273
Query: 171 G--KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRRKGYESHV 227
G P++A+ L +R GL D Y+ LL++ D N A V + +
Sbjct: 274 GGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLW 333
Query: 228 TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
T +I + G E E L G N L+ E+ E+ ++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G E Y I + G+LD AL+ ++ + G P + Y LI L + NR
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
+ L+ +M + P + T +A++C + K G + A + +S + G P+++AY
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 408 LILTL 412
++ L
Sbjct: 514 MLDVL 518
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-----YQNAFDVIAN 216
++VV Y G P+ A + + +G F + ++E +Q A V+ N
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFH---FACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 217 QIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+R+ G + T ++ + G E A N ++ G +N L+ LC
Sbjct: 778 -LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
R E +V E G +++ L + R G + E + + + + GY+P+ Y
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMK-AAGYLPTIRLY 895
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
+I L + R+ D ++ +M E ++ N++L + + +++Y +
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 396 FGLSPNHMAYKYLILTLCWDGCP 418
GL P+ Y LI+ C D P
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRP 978
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 36/241 (14%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ ++ Y G A LF ++ +G D Y+ LL + + + Q++
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 220 RKGY-ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVG-SGKELHGSEVNFLVGVLCDSNRF 277
+ G+ + +T +I KQG+L+ + G SG+ L+ L +NR
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR------QKRD------- 324
A L+ E G P Y I G + G+ +EA + F K D
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 325 ---------------------SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
S+G+ PS+ Y +I L++ENR +D+ + DM E C
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Query: 364 L 364
+
Sbjct: 575 M 575
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 2/235 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKH 235
A + G +R G D ++ L+++ + I N + R G V ++ ++ H
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 236 -LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
LC GRLEE+ + L G ++ S + ++ + ++ +G P
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
Y + I L +G R+ +A E + + + +N+++ +
Sbjct: 891 TIRLYRMMIELLCKGKRVRDA-EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ ET PD T N ++ +C+ + L GL P YK LI
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 14/263 (5%)
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDV 213
T ++ ++L+ YA G + A +F M G ++LL++L D V
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 214 IANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLC 272
+ +++ G++ S + ++++ + G + EV+ + + +G ++ +LC
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 273 DSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR------QKRDSE 326
R A +V E +F +E A +W L ++ A+E ++ Q+
Sbjct: 904 KGKRVRDAEIMVSEM-EEANFKVELA--IWNSML----KMYTAIEDYKKTVQVYQRIKET 956
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
G P YNTLI R+ R + Y L+ M P + T +++ F K + A
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 387 LELYSSRSQFGLSPNHMAYKYLI 409
+L+ GL + Y ++
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMM 1039
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 117/315 (37%), Gaps = 24/315 (7%)
Query: 125 FAAIFRILSRAKLRPLILD--FLRKFSRGRVTHKVRFHDTLVVGYAIA------------ 170
F A R+LS K R L + FL + H + +G+ IA
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 171 --------GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRK 221
GK ++A+ + +GL + Y L+ + + Y A ++ R
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 222 GYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAV 281
VT I+I L G +++ L+ G + N L+ LC + RF A
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 282 ELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICR 341
L E P Y I G +R G DEA + F + +G V +N +I
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE-KGVKVDVVHHNAMIKG 529
Query: 342 LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPN 401
R L++ + MNE +PD T + ++ + K A++++ + PN
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 402 HMAYKYLILTLCWDG 416
+ Y LI C G
Sbjct: 590 VVTYTSLINGFCCQG 604
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 127/319 (39%), Gaps = 9/319 (2%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFA--AIFRILSRAKLRPLILDFLRKFSRGRV--THK 156
D+ +K FDW + + FA + ++L+R ++ I D L V TH+
Sbjct: 76 DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHE 135
Query: 157 VRFHDTLVVGYAIAGKPDIALHLFG-KMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVI 214
H ++ YA +G A+ ++ + D + LL+ LV+ +A V
Sbjct: 136 ALSH--VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 215 ANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDS 274
R + + I++K +C +G++E + G G G + N ++G C
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 275 NRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR 334
E A + +E G P +G I G + G + + ++ V
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS 394
N + + +++ + + C PD+ T N ++ CK G +VA+ S
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCK-PDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 395 QFGLSPNHMAYKYLILTLC 413
+ GL PN+++Y LI C
Sbjct: 373 KKGLIPNNLSYAPLIQAYC 391
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 118/294 (40%), Gaps = 8/294 (2%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
AT+ + L + + + + FL + S+ + + L+ Y + + DIA L +
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M +G D Y +L++ LV + +A ++ I R +++ LCK GR
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA---VELVREFGTSGSFPLENA 298
+ + ++ L+ S F+ A L E G NA
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 299 YGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDM 358
I+G R G LDEAL + + E VP Y+T+I +++ + + M
Sbjct: 526 M---IKGFCRSGMLDEALACM-NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 359 NETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
+ P++VT +++ FC G +A E + L PN + Y LI +L
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 128/317 (40%), Gaps = 5/317 (1%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTH---KV 157
++ + L F WA +QP + + + +F L++ + I + + +H
Sbjct: 184 EVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSF 243
Query: 158 RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ-NAFDVIAN 216
++ ++ A A K ++A F K + G +D Y+ L+ + AF++ +
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 217 QIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNR 276
+ T ++I L K GRL+ + S + LV + + R
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
+ ++++ E G P + I + G+LD AL + + + S G+ P+ Y
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS-GFRPNFGLYT 422
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
+I + +L + DM + LP T + +L G D A+++Y+S +
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 397 GLSPNHMAYKYLILTLC 413
GL P +Y L+ L
Sbjct: 483 GLRPGLSSYISLLTLLA 499
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 16/273 (5%)
Query: 146 RKFSRGRVTHKVRFHD---------TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYH 196
R F RV HK++ D T++ + ++A + MR GL +
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLN 160
Query: 197 VLLNSLVEDN--YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVG 254
VL+ +L ++ + +R T +I LC+ GR++E + +V
Sbjct: 161 VLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220
Query: 255 SGKELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
K+ + V + L+ LC S + A+ + E + G P Y + GL + GR
Sbjct: 221 --KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNA 372
+A+E F + G P+ V Y TLI L +E ++ + LL MN PD
Sbjct: 279 LQAMELFEMMM-ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
V+ FC + A G++PN + +
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 139/329 (42%), Gaps = 23/329 (6%)
Query: 98 GDGDILSCLKFFDWAGRQPR--FNHTRATFA-AIFRILSRAKLRP---LILDFLRKFSRG 151
+ D+ + FD A + + H +++F + R++S K + LI+ R
Sbjct: 25 AEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIV-------RM 77
Query: 152 RVTHKVRFHDTLVV---GYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
++ + V D L+ GY +P +L +F KM+ D Y +L LVE+N
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQL 137
Query: 209 N-AFDVIANQIRRKGYESHVTNV-IVIKHLCKQ-GRLEEVEAYLNGLVGSGKELHGSEVN 265
N AF N +R G V ++ ++IK LC+ G ++ + G +
Sbjct: 138 NLAFKFYKN-MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
L+ LC R + A +L E P Y I GL +DEA+ + + + S
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK-S 255
Query: 326 EGYVPSHVRYNTLICRLLRENR-LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
+G P+ Y++L+ L ++ R L + M M C P+MVT ++ CK
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR-PNMVTYTTLITGLCKEQKIQ 314
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLC 413
A+EL + GL P+ Y +I C
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG-GRLDEALEFFRQKRDS 325
++ +L + N+ A + + G P + + I+ L R G +D L+ F +
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE-MPK 185
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P Y TLI L R R+++ L +M E P +VT +++ C D
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A+ G+ PN Y L+ LC DG
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 120/305 (39%), Gaps = 2/305 (0%)
Query: 106 LKFFDWAGRQPRFNHTRA-TFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLV 164
L FF+WA + ++H + + + + + L + V + L+
Sbjct: 134 LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILI 193
Query: 165 VGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE 224
Y AG A+H F +M G D + +++++L + + ++ +
Sbjct: 194 RRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP 253
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
+ +++ C+ G + E E + +G E + + ++ LC + RA ++
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+ SG P + +R V+ GR ++ L+ + Q + G P + YN LI R
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL-GCEPDTITYNFLIEAHCR 372
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
+ L + +L M + + T N + + K + A +YS + PN +
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 405 YKYLI 409
Y L+
Sbjct: 433 YNILM 437
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG-YESHVTNVIV 232
D+A HL M+ + +++ + +L+ V + N++ G + IV
Sbjct: 168 DLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIV 227
Query: 233 IKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGS 292
I +L ++ R E +++ + L +RFE
Sbjct: 228 ISNLSRKRRASEAQSFFDSL---------------------KDRFE-------------- 252
Query: 293 FPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
P Y +RG R G + EA + F++ + + G P+ Y+ +I L R +++ +
Sbjct: 253 -PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA-GIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 353 YLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
+ DM ++ P+ +T N ++ K G + L++Y+ + G P+ + Y +LI
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 413 CWD 415
C D
Sbjct: 371 CRD 373
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 16/339 (4%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQ-PRFNHTRATFAAIFRILSRAK----LRPLIL 142
F R++S +I L+ F +AG+ P F H T+ +I LSRA+ + L+
Sbjct: 48 FPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMA 107
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
D + + + F D L+ Y +AG+ + ++ +F ++ G+ + LLN L
Sbjct: 108 DLRNSYPPIKCGENL-FID-LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVL 165
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVI-----VIKHLCKQGRLEEVEAYLNGLVGSGK 257
+++ FD++ + +T I ++K LCK+ +E L+ + G
Sbjct: 166 IQN---QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 258 ELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
+ ++G E A ++ E G +P Y + + G + GR EA
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
+E P+ V Y +I L +E + + + +M E +PD V+
Sbjct: 283 VMDDMEKNE-IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
C+ D A L+ + P++ LI LC +G
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 4/258 (1%)
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNY 207
S G V + V + T++ GY G + A + +M +G D Y VL++ + +
Sbjct: 219 SMGLVPNLVTYT-TILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRF 277
Query: 208 QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
A V+ + + + + VT ++I+ LCK+ + E + ++ S +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ LC+ ++ + A L R+ + P I L + GR+ EA + F + +G
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF--EKG 395
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
+PS + YNTLI + + L + L DM E P+ T N ++ K G +
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 388 ELYSSRSQFGLSPNHMAY 405
+ + G PN +
Sbjct: 456 RVLEEMLEIGCFPNKTTF 473
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRR 220
+LV G+ ++ A+++ G+M G+ D +L+++L ++ A +V+ R
Sbjct: 18 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 77
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLCDSNRFE 278
+ VT +I LCK GRL + E L+ + K+++ + + F L+ +
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEM--DSKKINPNVITFSALIDAYAKRGKLS 135
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+ + + P Y I GL R+DEA++ S+G P+ V Y+TL
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGCTPNVVTYSTL 194
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
+ +R++D LL DM + + V+ N ++ + + G D+AL ++ + GL
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 399 SPNHMAYKYLILTLCWDG 416
PN +Y ++ L +G
Sbjct: 255 IPNIRSYNIVLAGLFANG 272
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 138/360 (38%), Gaps = 51/360 (14%)
Query: 92 VLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRG 151
+L G G ++ F+W + + + +T+++ + + AK L+ +
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHGKI--SVSTYSSCIKFVG-AKNVSKALEIYQSIPDE 160
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL--VEDNYQN 209
V ++++ GK D + LF +M+ GL D Y+ LL V++ Y
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK 220
Query: 210 AFDVIANQIRRKGYESHVTNVIVIKHLC-KQGRLEEVEAY-------------------L 249
A ++I ++ G + + +C GR EE E + L
Sbjct: 221 AIELIG-ELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 250 NGLVGSGKELHGSE----------------VNFLVGVLCDSNRFERAVELVREFGTSGSF 293
N G E + L+ V F+R+ EL+ E ++G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRD----SEGYVPSHVRYNTLICRLLRENRLN 349
E Y + + GL + G+L+EA F + S+GY S +I L R R
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS-----IMISALCRSKRFK 394
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L D T D+V +N +LC +C+ G + + + + +SP++ + LI
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 11/279 (3%)
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
DFL R KV+ + ++ + I+G+ + LF M+ G + Y + +
Sbjct: 84 DFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFV 142
Query: 203 VEDNYQNAFDVIANQIRRKGYESHVTNVI----VIKHLCKQGRLEEVEAYLNGLVGSGKE 258
N A ++ + ES NV ++ L K G+L+ + + G +
Sbjct: 143 GAKNVSKALEI----YQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK 198
Query: 259 LHGSEVN-FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE 317
N L G + N + +A+EL+ E +G YG + GR +EA
Sbjct: 199 PDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAEN 258
Query: 318 FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFF 377
F +Q + EG+ P+ Y++L+ + L+ +M +P+ V M +L +
Sbjct: 259 FIQQMK-VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 378 CKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
K G+ D + EL S G + N M Y L+ L G
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 14/295 (4%)
Query: 92 VLSHGGGDGDILSCLKFFDWAGR---QPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
+LS +G + SC+K FD R +P A ++ + P ++ + +
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY---PKAIELIGEL 228
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV-EDNY 207
+ + T++ A G+ + A + +M+ +G + + Y LLNS + +Y
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 208 QNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF 266
+ A D + +++ G + V ++K K G + L+ L +G +
Sbjct: 289 KKA-DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ L + + E A + + G A + I L R R EA E RDSE
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL---SRDSE 404
Query: 327 GYVPSH--VRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
V NT++C R + V ++ M+E PD T + ++ +F K
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 46/350 (13%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRIL-----------------SRAKLRP---LILDFL 145
L+ F WA P F H+R+T+ A+F L L P + + +
Sbjct: 60 LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTII 119
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKP-----------------DIALHLFG-KMRFQG 187
R F R R+ +V LV + I KP DIA F KM G
Sbjct: 120 RGFGRARLIKRVISVVDLVSKFGI--KPSLKVFNSILDVLVKEDIDIAREFFTRKMMASG 177
Query: 188 LDLDGFGYHVLLNSL-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVE 246
+ D + Y +L+ L + + + F ++ + V ++ LCK G++
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
+ ++ + KE + N L+ C+ + +++ L+ + + G P + L
Sbjct: 238 SLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 307 VRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPD 366
GR+ EALE ++ +S+G V NTL+ ++ ++M LP+
Sbjct: 294 CNEGRVSEALEVL-ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 367 MVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+ T N ++ +C +GM D AL+ ++ + N + LI L G
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 14/263 (5%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE----DNYQNAFDVIAN 216
+TLV GY GK +A F +M +G + Y++L+ + D+ + F+ +
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 217 QIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV---NFLVGVLCD 273
R + + T +I+ L GR ++ L ++ +HG+ + N ++
Sbjct: 382 DAIRWNFATFNT---LIRGLSIGGRTDDGLKILE-MMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 274 SNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHV 333
NR+E A+E + + FP + L G +D+ + Q EG VPS +
Sbjct: 438 ENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI-GEGGVPSII 494
Query: 334 RYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSR 393
+ LI R + ++ + L+ DM LP T NAV+ FCK ++
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDM 554
Query: 394 SQFGLSPNHMAYKYLILTLCWDG 416
++ G P+ +Y L+ LC G
Sbjct: 555 AERGCVPDTESYNPLLEELCVKG 577
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 95/222 (42%), Gaps = 10/222 (4%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMR----FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIAN 216
+TL+ G +I G+ D L + M+ G +D + V+ E+ +++A + +
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC-VIYGFYKENRWEDALEFLLK 450
Query: 217 QIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNR 276
K + V + LC++G +++++ + ++G G + L+ +
Sbjct: 451 M--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 508
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
E ++EL+ + T G P + + I G + ++ ++F + G VP YN
Sbjct: 509 IEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE-RGCVPDTESYN 567
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
L+ L + + + L M E +PD ++++ FC
Sbjct: 568 PLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FC 607
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 24/277 (8%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+DF R R + + ++ + +PD+A+ L+ KM + + L+ + +++L+
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150
Query: 202 LVEDNYQNAFDVIA-NQIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKEL 259
D ++ +F + ++ + G++ V + H LC + R+ E A +V +G
Sbjct: 151 FC-DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG--- 206
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
F AV L + G P+ + I GL GR+ EA
Sbjct: 207 -----------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
K +G V Y T++ + + LL M ET PD+V +A++ CK
Sbjct: 250 -NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
G A L+S + G++PN Y +I C G
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 6/292 (2%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
T+ I + + L+ L K + V + ++ G A +LF +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 183 MRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M +G+ + F Y+ +++ + +A ++ + I R+ +T +I K+G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
L E E + ++ N ++ C NRF+ A + + P +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I R R+DE ++ R+ G V + YNTLI + LN L +M
Sbjct: 438 IIDVYCRAKRVDEGMQLLREIS-RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
PD +T N +L FC+ + ALEL+ + + +AY +I +C
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 8/210 (3%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
TF I + RAK + LR+ SR + ++TL+ G+ + A LF +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDNYQNA----FDVIANQIRRKGYESHVTNVIVIKHLCK 238
M G+ D ++LL E+ F+VI Q+ + ++ N+I I +CK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVI--QMSKIDLDTVAYNII-IHGMCK 549
Query: 239 QGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENA 298
+++E L G E N ++ C + A L + +G P +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 299 YGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
Y IRG ++ G +D+++E + R S G+
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMR-SNGF 638
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 22/273 (8%)
Query: 155 HKVRFHDT-----LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
H+ F DT ++ G+ + D A H+F M + V N+++ D Y
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV--------VTFNTII-DVYCR 444
Query: 210 AFDV-----IANQIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSE 263
A V + +I R+G ++ T + H C+ L + ++ G
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
N L+ C++ + E A+EL S AY + I G+ +G ++DEA + F
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSL 563
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
G P YN +I ++ ++D L M + PD T N ++ K G
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
D ++EL S G S + K ++ L DG
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIK-MVADLITDG 655
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
+N ++ + A+ + +E GS P Y ++G+ GR+ + L F+++ +
Sbjct: 226 LNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
+G VP+ Y LIC L E RL++ ++ DM PDM+T N VL C+ G
Sbjct: 286 -VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRG 344
Query: 384 DVALEL 389
ALE+
Sbjct: 345 SEALEM 350
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 24/274 (8%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
+DF R R + + ++ + +PD+A+ L+ KM + + L+ + +++L+
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150
Query: 202 LVEDNYQNAFDVIA-NQIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKEL 259
D ++ +F + ++ + G++ V + H LC + R+ E A +V +G
Sbjct: 151 FC-DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG--- 206
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF 319
F AV L + G P+ + I GL GR+ EA
Sbjct: 207 -----------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 320 RQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
K +G V Y T++ + + LL M ET PD+V +A++ CK
Sbjct: 250 -NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
G A L+S + G++PN Y +I C
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 6/292 (2%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
T+ I + + L+ L K + V + ++ G A +LF +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 183 MRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M +G+ + F Y+ +++ + +A ++ + I R+ +T +I K+G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
L E E + ++ N ++ C NRF+ A + + P +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNET 361
I R R+DE ++ R+ G V + YNTLI + LN L +M
Sbjct: 438 IIDVYCRAKRVDEGMQLLREI-SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 362 CTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
PD +T N +L FC+ + ALEL+ + + +AY +I +C
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 12/254 (4%)
Query: 123 ATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
TF I + RAK + LR+ SR + ++TL+ G+ + A LF +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDNYQNA----FDVIANQIRRKGYESHVTNVIVIKHLCK 238
M G+ D ++LL E+ F+VI Q+ + ++ N+I I +CK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVI--QMSKIDLDTVAYNII-IHGMCK 549
Query: 239 QGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENA 298
+++E L G E N ++ C + A L + +G P +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 299 YGLWIRGLVRGGRLDEALEFFRQKRDS--EGYVPSHVRYNTLICRLLRENRLNDVYYLLM 356
Y IRG ++ G +D+++E + R + G + +ICR+ E + + YL
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIEN--YLRP 667
Query: 357 DMN-ETCTLPDMVT 369
+N ET ++P V
Sbjct: 668 KINGETSSIPRYVV 681
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 21/270 (7%)
Query: 155 HKVRFHDT-----LVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQN 209
H+ F DT ++ G+ + D A H+F M + V N+++ D Y
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV--------VTFNTII-DVYCR 444
Query: 210 AFDV-----IANQIRRKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSE 263
A V + +I R+G ++ T + H C+ L + ++ G
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
N L+ C++ + E A+EL S AY + I G+ +G ++DEA + F
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSL 563
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
G P YN +I ++ ++D L M + PD T N ++ K G
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLC 413
D ++EL S G S + K +C
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 93/226 (41%), Gaps = 2/226 (0%)
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIR 219
+T++ Y A + D + L ++ +GL + Y+ L++ E DN A D+ I
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
+T I++ C+ +LEE + S +L N ++ +C ++ +
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A +L G P Y + I G + +A F + +D+ G+ P + YNTLI
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN-GHEPDNSTYNTLI 614
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
L+ ++ L+ +M D T+ C++ ++
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEI 660
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
N L+ CD ++ ++ + G P + + GL R+ EAL F +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 325 SE--------------GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTM 370
+ G P + +NTLI L E R+ + L+ M D+VT
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 371 NAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ CK+G AL L S + + P+ + Y +I LC DG
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 8/313 (2%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D S L WA H+ + IL +AK + +F+ + RG +
Sbjct: 100 DWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVTLNTV 158
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
++ +A AG+ + A+ +F ++ GL+ + ++LL++L ++ V+ Q++
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE-- 278
+ T I I CK R+EE + + G G +++ + C +FE
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG--FRPCVISYTTIIRCYCQQFEFI 276
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+ E++ E +GS P Y + L +EAL + + S G P + YN L
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS-GCKPDSLFYNCL 335
Query: 339 ICRLLRENRLNDVYYLL-MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
I L R RL + + ++M E + T N+++ +C D A+EL
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 398 L-SPNHMAYKYLI 409
L +P+ Y+ L+
Sbjct: 396 LCNPDVHTYQPLL 408
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 8/313 (2%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D S L WA H+ + IL +AK + +F+ + RG +
Sbjct: 100 DWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVTLNTV 158
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
++ +A AG+ + A+ +F ++ GL+ + ++LL++L ++ V+ Q++
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE-- 278
+ T I I CK R+EE + + G G +++ + C +FE
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG--FRPCVISYTTIIRCYCQQFEFI 276
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+ E++ E +GS P Y + L +EAL + + S G P + YN L
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS-GCKPDSLFYNCL 335
Query: 339 ICRLLRENRLNDVYYLL-MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
I L R RL + + ++M E + T N+++ +C D A+EL
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 398 L-SPNHMAYKYLI 409
L +P+ Y+ L+
Sbjct: 396 LCNPDVHTYQPLL 408
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTN 229
GK D A+ LF +M +GL L+ GY+ L+ L + A V + + + T
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV-NFLVGVLCDSNRFERAVELVREFG 288
+++ L +G+L L+G+V K + ++LV L ++ E R F
Sbjct: 344 SLLLNLLVAEGQL----VRLDGVVEISKRYMTQGIYSYLVRTL---SKLGHVSEAHRLFC 396
Query: 289 TSGSFPLE---NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
SFP++ ++Y + L G+ EA+E K +G V + YNT+ L +
Sbjct: 397 DMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 346 NRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
+++ ++ L M + PD+ T N ++ F ++G D A+ ++ + P+ ++Y
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 406 KYLILTLCWDG 416
LI L +G
Sbjct: 516 NSLINCLGKNG 526
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 42/352 (11%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSR-AKLRPLILDFLRKFSRGRVTHKVRF 159
D +C F D R R + T+ + R + R K + F + G +T V
Sbjct: 251 DEKACQVFEDMKKRHCRRDE--YTYTIMIRTMGRIGKCDEAVGLFNEMITEG-LTLNVVG 307
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++TL+ A D A+ +F +M G + + Y +LLN LV + D + +
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVE-------------------AYLNGLVGSGKELH 260
R Y + +++ L K G + E + L L G+GK +
Sbjct: 368 R--YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 261 GSEVNFLV---GVLCDSNRFERAV-------------ELVREFGTSGSFPLENAYGLWIR 304
E+ + GV+ D+ + +L + G P Y + I
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 305 GLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTL 364
R G +DEA+ F + S+ P + YN+LI L + +++ + +M E
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCK-PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 365 PDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
PD+VT + ++ F K ++A L+ G PN + Y L+ L +G
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 12/233 (5%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKH 235
A ++ ++R G LD F Y++LL++L +D + A V + +R T I+I+
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDALAKD--EKACQVFEDMKKRHCRRDEYTYTIMIRT 279
Query: 236 LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPL 295
+ + G+ +E N ++ G L+ N L+ VL ++A+++ +G P
Sbjct: 280 MGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPN 339
Query: 296 ENAYGLWIRGLVRGG---RLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
E Y L + LV G RLD +E S+ Y+ + Y+ L+ L + +++ +
Sbjct: 340 EYTYSLLLNLLVAEGQLVRLDGVVEI------SKRYMTQGI-YSYLVRTLSKLGHVSEAH 392
Query: 353 YLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAY 405
L DM + + ++L C G A+E+ S + G+ + M Y
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 256 GKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEA 315
G E+ +N L+ LC+S E A++L+ EF S P + IRG G+ +EA
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 316 LEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLC 375
+ ++ + E P + +N LI L ++ R+ + LL M P+ T VL
Sbjct: 257 FKLL-ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 376 FFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
A E+ S +G+ P+ ++YK ++L LC
Sbjct: 316 GLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 14/249 (5%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDV-IANQIRRKGYE------ 224
KP AL + + +G + D Y + + + + D+ +AN + R+ E
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCK-----TLDLAMANSLLREMKEKKLCVP 302
Query: 225 SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELV 284
S T VI KQG +++ + ++ G ++ L+ C +N A+ L
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 285 REFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLR 344
+ G P + + I + G +++ALEF++ K + G PS +T+I L+
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK-KMEVLGLTPSVFHVHTIIQGWLK 421
Query: 345 ENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMA 404
+ + L + ET L ++ N +L + CK G D A EL S G+ PN ++
Sbjct: 422 GQKHEEALKLFDESFET-GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 405 YKYLILTLC 413
Y ++L C
Sbjct: 481 YNNVMLGHC 489
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 3/241 (1%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYH-VLLNSLVEDNYQNAFDVIANQIRRKGYESHVTN 229
GK D A L KM +G+ + Y+ V+L + N A V +N + + ++ T
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
I+I + + +N + S E++G ++ LC + +A EL+
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 290 SGSFPLE-NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRL 348
+ +Y I G + G +D A+ + ++ G P+ + Y +L+ L + NR+
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY-EEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
+ + +M D+ A++ FCK + A L+S + GL+P+ Y L
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 409 I 409
I
Sbjct: 696 I 696
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 133/318 (41%), Gaps = 7/318 (2%)
Query: 99 DGDILSCLKFFDWAGRQ-PRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKV 157
+ D++S L FD ++ P N TF+ + + L+F +K +T V
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSV--TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 158 RFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQ 217
T++ G+ K + AL LF + GL + F + +L+ L + + + ++
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 218 IRRKGYESHVT--NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+ +G +V N +++ H C+Q ++ + ++ G + + + L+ ++
Sbjct: 469 MESRGIGPNVVSYNNVMLGH-CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 276 RFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRY 335
+ A+E+V +S Y I GL + G+ +A E + + S + Y
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 336 NTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQ 395
N++I +E ++ +M P+++T +++ CK D ALE+
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 396 FGLSPNHMAYKYLILTLC 413
G+ + AY LI C
Sbjct: 648 KGVKLDIPAYGALIDGFC 665
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 38/271 (14%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGY-ESHVTNVIVI 233
AL + M ++++G Y ++N L + A +++AN I K S ++ +I
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
K+G ++ A + G+G + L+ LC +NR ++A+E+ E G
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN----------------- 336
AYG I G + ++ A F + + EG PS YN
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLE-EGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 337 ------------------TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
TLI LL++ L L +M +PD + ++
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 379 KLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
K G ++++ + ++PN + Y +I
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I C+ RL + L ++ G E LV C NRF A+ LV + G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P Y I L G+++ AL+ + + G P V YN+LI RL
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILT 411
+L DM PD++T +A++ + K G A + Y+ Q ++PN + Y LI
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 412 LCWDG 416
LC G
Sbjct: 299 LCIHG 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 2/272 (0%)
Query: 142 LDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNS 201
LD L+ + + V +++L+ +G ++ + M G+ D + L++
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 202 L-VEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
E A I+R + VT +I LC G L+E + LN LV G +
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
N L+ C + R + ++++ G Y +G + G+ A E
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA-EKVL 382
Query: 321 QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKL 380
+ S G P +N L+ L ++ L D+ ++ T+ ++T N ++ CK
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 381 GMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
+ A L+ S + G+SP+ + Y +++ L
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 126/348 (36%), Gaps = 45/348 (12%)
Query: 108 FFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGY 167
F D A P + F+ + +++ ++ R ++H + TL+ +
Sbjct: 67 FCDMAESHPL--PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCF 124
Query: 168 AIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV 227
+ +AL GKM G + + L+N N + +QI GYE +V
Sbjct: 125 CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNV 184
Query: 228 -----------------TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
T + V+KH+ K G +V Y N L+ + H +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY-NSLIT--RLFHSGTWGVSARI 241
Query: 271 LCDSNRFERAVE------LVREFGTSGSF----------------PLENAYGLWIRGLVR 308
L D R + + L+ +G G P Y I GL
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 309 GGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMV 368
G LDEA + S+G+ P+ V YNTLI + R++D +L M+ D
Sbjct: 302 HGLLDEAKKVL-NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 369 TMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
T N + +C+ G A ++ G+ P+ + L+ LC G
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 121/310 (39%), Gaps = 39/310 (12%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
F RGR V + L+ G AGK A+ ++ M G+ D L+ L
Sbjct: 137 FFCMVQRGREPDVVSYT-ILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 204 EDNYQN-AFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
+ A++++A +I+ + S V +I CK GR+E+ EA + + G E
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSG-------------------------SFPLE 296
N L+ D+N +RA ++ E SG +F ++
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Query: 297 N----------AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLREN 346
+Y I R +A F + R +G V + V Y +LI LRE
Sbjct: 316 EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMR-QKGMVMNVVTYTSLIKAFLREG 374
Query: 347 RLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYK 406
+ LL M E PD + +L CK G D A +++ + ++P+ ++Y
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 407 YLILTLCWDG 416
LI LC G
Sbjct: 435 SLISGLCRSG 444
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 10/264 (3%)
Query: 151 GRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNA 210
RV ++ L+ G+ AG+ + A L M G + D Y+VLLN ++N
Sbjct: 214 ARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKR 273
Query: 211 FDVIANQIRRKGYE--SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV---N 265
+ + ++ R G + ++ N ++ +H R+ + N +V + +V +
Sbjct: 274 AEGVMAEMVRSGIQLDAYSYNQLLKRHC----RVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
L+ C ++ +A L E G Y I+ +R G A + Q +
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
G P + Y T++ L + ++ Y + DM E PD ++ N+++ C+ G
Sbjct: 390 -GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 386 ALELYSSRSQFGLSPNHMAYKYLI 409
A++L+ P+ + +K++I
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFII 472
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVT 228
+G D A+ +F +MR + F Y+ + LV ++ + I ++ G+ T
Sbjct: 22 SGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFT 81
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFG 288
I LCK + + ++A L+ + G N + +LC N+ AV+
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 289 TSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRL 348
G P +Y + I GL R G++ +A+E + S G P + L+ L ++
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARKV 200
Query: 349 NDVYYLLMDMNETCTLP-DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
+ Y ++ + ++ + V NA++ FCK G + A L S S+ G P+ + Y
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 408 LI 409
L+
Sbjct: 261 LL 262
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
+F+ K R V + TL+ + A A LF +MR +G+ ++ Y L+ +
Sbjct: 311 NFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 203 VEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
+ + + + +Q+ G + ++ HLCK G +++ N ++
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
N L+ LC S R A++L + P E + I GL+RG +L A + + Q
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 322 KRDSEGYVPSHVRYNTLI 339
D +G+ +TLI
Sbjct: 491 MMD-KGFTLDRDVSDTLI 507
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 220 RKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER 279
R Y S + N++ K G ++ + + S + + N +GVL +RFE
Sbjct: 9 RLAYRSRIANLV------KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL 62
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A + + G + Y +I GL + + D ++ ++ G++P +N +
Sbjct: 63 AEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFD-LIDALLSDMETLGFIPDIWAFNVYL 121
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
L REN++ M + PD+V+ ++ + G A+E++++ + G+S
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 400 PNHMAYKYLILTLC 413
P++ A L++ LC
Sbjct: 182 PDNKACAALVVGLC 195
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 1/241 (0%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV-IV 232
++A ++ M+ G L F Y ++ L + + D + + + G+ + +
Sbjct: 61 ELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVY 120
Query: 233 IKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGS 292
+ LC++ ++ +V G+E L+ L + + AVE+ SG
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 293 FPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
P A + GL ++D A E ++ S S V YN LI + R+
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 353 YLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
L M++ PD+VT N +L ++ M A + + + G+ + +Y L+
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 413 C 413
C
Sbjct: 301 C 301
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 2/290 (0%)
Query: 125 FAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMR 184
F+ + +++ L++ F K ++H + ++ L+ + + +AL L GKM
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 185 FQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLE 243
G + D + LLN N + + +Q+ GY+ VT +I L +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
E A ++ +V G + +V LC + A+ L+ + + Y I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
L + D+AL F + +++G P+ + Y++LI L R +D LL DM E
Sbjct: 261 DSLCKYRHEDDALNLFTE-MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P++VT +A++ F K G A +LY + + PN Y LI C
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK 221
TL+ G + K A+ L +M +G D Y ++N L + + + N++
Sbjct: 188 TLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 222 GYESHVT-NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
E++V VI LCK ++ + G + + L+ LC+ R+ A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVPSHVRYNTL 338
L+ + P + I V+ G+L +A + + + KR + P+ Y++L
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID---PNIFTYSSL 364
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I +RL + +L M LP++VT N ++ FCK D +EL+ SQ GL
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 399 SPNHMAYKYLI 409
N + Y LI
Sbjct: 425 VGNTVTYTTLI 435
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 18/266 (6%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV----EDNYQNAFDVIA 215
+ +V G G D+AL+L KM ++ + Y +++SL ED+ N F
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF---- 276
Query: 216 NQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF--LVGVLC 272
++ KG +V T +I LC GR + L+ ++ ++++ + V F L+
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE--RKINPNLVTFSALIDAFV 334
Query: 273 DSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ--KRDSEGYVP 330
+ +A +L E P Y I G RL EA + ++D +P
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC---LP 391
Query: 331 SHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELY 390
+ V YNTLI + R++ L +M++ + + VT ++ F + D A ++
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 391 SSRSQFGLSPNHMAYKYLILTLCWDG 416
G+ PN + Y L+ LC +G
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNG 477
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 134/363 (36%), Gaps = 49/363 (13%)
Query: 87 PFVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAK---------- 136
P V ++L + + +FF WAG Q ++H + + ILS K
Sbjct: 126 PVVCKILQRLQYEEK--TAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVI 183
Query: 137 --------------LRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
L ++L+ LRK+ +TH +F + + +P+I
Sbjct: 184 DMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIR--VKTQPEIN------ 235
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRL 242
+++LL++L + + + ++R + T ++ C+
Sbjct: 236 -----------AFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDP 284
Query: 243 EEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF---PLENAY 299
++ L ++ +G + + C + + A +L T GS P +
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 300 GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMN 359
L I L + + +E E + S G +P Y +I + ++++ Y L +M+
Sbjct: 345 ALMIVALAKNDKAEECFELI-GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 360 ETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCPS 419
PD+VT N L C+ D AL+LY + +P+ Y LI P
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 420 GPF 422
G F
Sbjct: 464 GAF 466
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 123/299 (41%), Gaps = 4/299 (1%)
Query: 114 RQPRFNHTRATFAAIFRILSRAKL--RPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAG 171
RQ + ++ + + L+R+ ++L ++ R ++ V+ + +++G+A +G
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV- 230
P AL L G + GL ++++L + + + ++R+ G +
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
++K K G L++ E+ ++ + G + L+ ++ R+E A +++E
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
P + + G G + + ++ + S G P YN +I + N L+
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK-SIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
M PD VT N ++ CK G VA E++ + + G P Y +I
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 10/240 (4%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI-----RRKGYESHVT 228
D A+ F +M +G++ D V N+L++ + ++ ++A ++ RR T
Sbjct: 461 DHAMTTFDRMLSEGIEPD----RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFG 288
I+I Q R ++++ L + G + LV V S RF A+E + E
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 289 TSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRL 348
+ G P Y I + G ++A+ FR S+G PS + N+LI + R
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM-TSDGLKPSLLALNSLINAFGEDRRD 635
Query: 349 NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
+ + +L M E PD+VT ++ ++ +Y G P+ A L
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 6/253 (2%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
+ L+ Y AG+ + A + +M + + F + LL + +Q F V+ ++
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL-KEM 435
Query: 219 RRKGYES--HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNR 276
+ G + NV VI K L+ + ++ G E N L+ C R
Sbjct: 436 KSIGVKPDRQFYNV-VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
A E+ G P Y + I R D+ ++ K S+G +P+ V +
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD-MKRLLGKMKSQGILPNVVTHT 553
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
TL+ + R ND L +M P NA++ + + G+++ A+ + +
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 397 GLSPNHMAYKYLI 409
GL P+ +A LI
Sbjct: 614 GLKPSLLALNSLI 626
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 2/322 (0%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
+LR LS+ +FF W+G Q F HT ++ + +I + + + +
Sbjct: 116 ILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEM 175
Query: 149 SRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQ 208
+ R + L+ AG A+ F K + Y+ +LNSL+
Sbjct: 176 VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQY 235
Query: 209 NAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFL 267
+ + Q+ G+ V T I++ + G+++ + + + G N L
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ +L N+ A+ + G P Y I GL R G L EA ++F + G
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAG 354
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P V Y +I + L+ + +M LP++ T N+++ C G A
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 414
Query: 388 ELYSSRSQFGLSPNHMAYKYLI 409
L G +PN + Y L+
Sbjct: 415 WLLKEMESRGCNPNFVVYSTLV 436
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 122/330 (36%), Gaps = 38/330 (11%)
Query: 114 RQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKP 173
R+ + R + F L + ++ R+ + + V + TL+ G + GK
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNY-QNAFDVIANQIRRKGYESHVTNVIV 232
A L +M G D Y+VL L + Q AF+ + R ++VT+ +V
Sbjct: 448 SDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 233 IKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFER------------- 279
I+ L G L++ EA+ L +E S V C + FER
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 280 ----------------AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
A +L+ G P ++ YG I R + +A EFF +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF-EIL 626
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
++ VP Y +I R N Y L DM PD+VT + +L +
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NS 679
Query: 384 DVALELYSSRSQFGLSPNHMAYKYLILTLC 413
D L++ F + P+ + Y +I C
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYC 709
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 137/329 (41%), Gaps = 15/329 (4%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRK 147
+ R+++ G D + FF W + + T+ + + L R + + L +
Sbjct: 188 LISRMIASGRSD----MVVGFF-WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSR 242
Query: 148 FSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLD----GFGYHVLLNSLV 203
+ F+ + G + DIA L +R + +D G Y ++ L
Sbjct: 243 LLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLC 302
Query: 204 -EDNYQNAFDVIANQIRRKGYES--HVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELH 260
E ++A V+ + + + G + +V + I+ H + V+ + N ++ K ++
Sbjct: 303 YEMRIEDAESVVLD-MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF-NKMLKKRKRIN 360
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFR 320
V+ ++ C F A +L +EF + Y + L + G+++EA+E FR
Sbjct: 361 CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFR 420
Query: 321 QKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKL 380
+ +G P + Y TLI + + +D + L+++M+ T PD+V N +
Sbjct: 421 EMT-GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATN 479
Query: 381 GMADVALELYSSRSQFGLSPNHMAYKYLI 409
G+A A E G+ P ++ + +I
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVI 508
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
AF ++ S T+ I+I + G + + E+ + G +L N L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
+++ + EL+ E ++G P Y + I +V G +DEA E + G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE-LIRRGF 544
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
VPS + + +I + + + L M + PD+VT +A+L +CK + A+
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L++ GL P+ + Y LI C G
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 209 NAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLV 268
AF ++ S T+ I+I + G + + E+ + G +L N L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 269 GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGY 328
+++ + EL+ E ++G P Y + I +V G +DEA E + G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE-LIRRGF 544
Query: 329 VPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALE 388
VPS + + +I + + + L M + PD+VT +A+L +CK + A+
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 389 LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L++ GL P+ + Y LI C G
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 122/316 (38%), Gaps = 39/316 (12%)
Query: 97 GGDGDILSCLKFFDWAG-RQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTH 155
G G + SCL F++W ++P RA + +F +L R ++ IL L +
Sbjct: 213 GESGFVKSCLYFYEWMSLQEPSLASPRAC-SVLFTLLGRERMADYILLLL-----SNLPD 266
Query: 156 KVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIA 215
K F D + AI+G L R Y +A++V
Sbjct: 267 KEEFRDVRLYNAAISG-------LSASQR----------------------YDDAWEVYE 297
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGR-LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDS 274
+ Y +VT I+I L K GR +EV + G + LV CD
Sbjct: 298 AMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 275 NRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR 334
E A+ + E G Y + + ++E F + RD +G PS
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD-KGLKPSAAT 416
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG-MADVALELYSSR 393
YN L+ R + + V LL +M + P++ + ++ + + M+D+A + +
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM 476
Query: 394 SQFGLSPNHMAYKYLI 409
+ GL P+ +Y LI
Sbjct: 477 KKVGLKPSSHSYTALI 492
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 19/315 (6%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVV 165
L+FF W F+H T + +L++ + DFLR+ SR V ++
Sbjct: 111 LEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITC 170
Query: 166 GYAIAGKPDI---ALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRK 221
G+ AL F +M+ D + Y+ ++N+L N++ A + +Q++
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKA-RFLLDQMQLP 229
Query: 222 GYE---SHVTNVIVIKHLCKQG-----------RLEEVEAYLNGLVGSGKELHGSEVNFL 267
G+ T I+I C+ G R+ E ++ G N L
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 268 VGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
+ C +NR RA+EL + T G P + Y +IR ++ A+E R +
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
VP Y LI L+ R + L+++M E +P T V G+A
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLD 409
Query: 388 ELYSSRSQFGLSPNH 402
E R + G+ +
Sbjct: 410 EELHKRMREGIQQRY 424
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 139/353 (39%), Gaps = 45/353 (12%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAK-------------------LRPLILDFLR 146
L F+ A +Q FNH AT++ + L R K L L+ +R
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 147 KFSRGRVTHKVRFHDTLVVGYAIAGKPDI--------------------ALHLFGKMRFQ 186
FSR + KV L+ A KP + L L+ K
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARV-KPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNL- 190
Query: 187 GLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKG--YESHVTNVIVIKHLCKQGRLEE 244
GL + +++L+ ++ N ++ +++R G Y + +T ++ L R +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 245 -VEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
VE + + + G N ++ C + ERA +++ +G P Y +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
G + G++ EA + F + + + G V Y TL+ R ++ LL +M +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKT-GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
D +T N +L G ++ AL++ G+ N +Y+ ++ LC +G
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 176 ALHLFGKM-RFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIK 234
A+ LF M +G+ D ++V++N I + +++ G +V N +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 235 H-LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
+ CK G+++E + + + +G +L L+ C + + A++L+ E S
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
Y + +RGL GR +EAL+ Q SEG + Y ++ L L
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQ-WGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
L M+E P T N ++ C+ G ++ + + + GL P ++ ++ ++C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 13/220 (5%)
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
ILDF++K V + L+ G+ GK A F +++ GL LD GY L+N
Sbjct: 290 ILDFMKK---NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 201 SLVEDNYQN-AFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKEL 259
+ + A ++ + +T ++++ L +GR EE L+ G L
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 260 HGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALE-- 317
+ ++ LC + E+AV+ + G +P + + L G + +
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 318 --FFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
F R G +P + ++ + +E +L V+ LL
Sbjct: 467 IGFLRI-----GLIPGPKSWGAVVESICKERKLVHVFELL 501
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
P Y + I GL + G+L++A + F S+ ++P Y LI +N +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
L +M +P++VT NA++ CKLG D A L Q G++PN + Y LI L
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 414 WDG 416
G
Sbjct: 837 KSG 839
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 2/228 (0%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQI 218
++TLV GY AG D AL L +M + + Y++LL + + + +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+R ++ +++ L K G E ++ G +N ++ LC +
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A E++ P Y G + G L EA ++ + +G P+ YNTL
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV-KEYMERKGIFPTIEMYNTL 582
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
I + LN V L++++ P + T A++ +C +GM D A
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 2/265 (0%)
Query: 145 LRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
LR S V+ V + +L+ GY G + A H+F ++ + L D Y VL++
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 205 D-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
++A V N I + +I CK G+L E E + + +
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
N LV C + + A++L + P Y + ++G R G + L ++
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
G + +TL+ L + N+ L ++ L D +T+N ++ CK+
Sbjct: 464 -KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 384 DVALELYSSRSQFGLSPNHMAYKYL 408
+ A E+ + + F P Y+ L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 137/335 (40%), Gaps = 27/335 (8%)
Query: 104 SCLKFFDWAGRQPRFNHTRATFAAIFRILSRAK----LRPLILDFLRKFSRG-------- 151
+CL+ F+ A +Q +F + + ILSRA+ + + + + G
Sbjct: 86 ACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELV 145
Query: 152 RVTHKVRFH----DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE--D 205
RV + F D ++ YA G ALH+F M G + LL++LV +
Sbjct: 146 RVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 206 NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGS-GKELHGSEV 264
N+ A V I + T IV+ C+ G +++ + S G EL+
Sbjct: 206 NFV-ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTY 264
Query: 265 NFLV---GVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
N L+ ++ D R + L+ E G S + Y I+G + G ++EA F
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVV---TYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
++ + H+ Y L+ R ++ D + +M E + N+++ +CK G
Sbjct: 322 LKEKKLVADQHM-YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A +++S + + L P+H Y L+ C G
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 138/370 (37%), Gaps = 49/370 (13%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRA-------TFAAIFRILSRAKLRPL 140
FV+RV G G L ++F WA + T + A+ R + L L
Sbjct: 159 FVVRVFESPGISGKNL--IRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDL 216
Query: 141 ILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN 200
+ + K S G + + + L+ + GK A +F K G + Y++ L
Sbjct: 217 VKEIGEKESCGVLN--LEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLE 274
Query: 201 SLVEDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEV-------------- 245
+L + ++ + + ++ + G S + +I CK+G+ EE
Sbjct: 275 ALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSL 334
Query: 246 ----------------------EAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVEL 283
+ L L G + + ++ LC + A L
Sbjct: 335 PPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKAL 394
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
+ + + G P + L + + G LDEA E + +S G P Y +I
Sbjct: 395 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL-MESRGLKPDVYTYTVIISGYA 453
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+ +++ +L + + VT +A++ +CK+ D AL+L + +FG+ PN
Sbjct: 454 KGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 404 AYKYLILTLC 413
Y LI + C
Sbjct: 514 EYNKLIQSFC 523
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 134/348 (38%), Gaps = 40/348 (11%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKLR-PLILDFLRKFSRGRVTHKVRFHDTLV 164
L+ FD+ ++ R+ +F + ++ + R L L+ R+ V V +V
Sbjct: 174 LRVFDYMVKKGLSIDERSCI--VFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 165 VGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE 224
G G+ + + L + +G+ + + Y+ ++N+ V+ + + + +++ G
Sbjct: 232 EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 225 -SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVEL 283
+ VT ++++ K G++ + E + + G E L+ C +RA L
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 284 VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
E G P YG I G+ + G + A E + S+G + V +NTLI
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAA-EILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVL-CF-------------------------- 376
R+ +++ + M + D+ T N + CF
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 377 --------FCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+CK G + A L+ S G+ PN + Y +I C G
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 6/273 (2%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFD 212
+ V + +L+ G A LF ++ +GL + Y L++ + + A +
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 213 VIANQIRRKGYESHVTNVI---VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
++ N+++ KG ++T V+ +I C++G ++E + + G + N +
Sbjct: 385 ILMNEMQSKGV--NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
R++ A + + G +Y I + G ++EA F + S+G
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE-MSSKGVQ 501
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P+ + YN +I ++ ++ + L +M PD T +++ C D A+ L
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 390 YSSRSQFGLSPNHMAYKYLILTLCWDGCPSGPF 422
+S GL N + Y +I L G F
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 26/310 (8%)
Query: 117 RFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIA 176
R T F + R KL L + + R V+ ++L+ G+
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE---- 133
Query: 177 LHLFGKMRFQGLDLDGFG------YHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTN 229
KM+ + +D FG Y++L++ + + +A + +++K + VT
Sbjct: 134 ---LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNF-----LVGVLCDSNRFERAVELV 284
+I LCK R++E + ++ +++G L+ LC A +L
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDML----KVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 285 REFGTSGSFPLENA-YGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
E G ++ A Y I L++ GR +E + ++ +G P V YN LI
Sbjct: 247 DE-AYEGKIKVDAAIYSTLISSLIKAGRSNE-VSMILEEMSEKGCKPDTVTYNVLINGFC 304
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
EN +L +M E PD+++ N +L F ++ + A L+ + G SP+ +
Sbjct: 305 VENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTL 364
Query: 404 AYKYLILTLC 413
+Y+ + LC
Sbjct: 365 SYRIVFDGLC 374
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 172 KPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIRRKGYESHVTNV 230
KP I L LF M+ + D +V+++ L + ++A N I K VT
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTS 290
+I C RL+E E L + + + L+ VLC +N + A+ +
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLND 350
GS P YG + + ++ + + F + ++ +G PS V Y+ +I L + R+++
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGISPSIVSYSIIIDGLCKRGRVDE 730
Query: 351 VYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYL 408
+ + LPD+V ++ +CK+G A LY + G+ P+ + + L
Sbjct: 731 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 18/284 (6%)
Query: 147 KFSRGRVTHKVRFH----DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLN-S 201
+FS + +R + ++L+ G+ + D AL +F M G+ D + ++ S
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 202 LVEDNY---------QNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGL 252
++ED + FD++ Q + + V NV VI L K R+E+ + N L
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLM--QRNKISADIAVCNV-VIHLLFKCHRIEDASKFFNNL 598
Query: 253 VGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
+ E N ++ C R + A + + P + I L + +
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNA 372
D A+ F + +G P+ V Y L+ + + + L +M E P +V+ +
Sbjct: 659 DGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++ CK G D A ++ L P+ +AY LI C G
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 8/238 (3%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
+ TL+ GY AG + LF + +G+ LD + ++ V+ V+ ++
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 220 RKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
+G +V T I+IK LC+ GR+ E ++ G E + L+ C
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
L + G P YG+ + GL + G + A+ F K + + V +N+L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FSVKMLGQSIRLNVVVFNSL 502
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCF------FCKLGMADVALELY 390
I R NR ++ + M PD+ T V+ FCK + L+L+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L G+ + G A + M +GL D Y +LL + + V+ +
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 220 RKGYE--SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
+G+E S + +++ LCK GR++E + N + G + ++ LC +F
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
+ A+ L E P +G + GL + G L EA S G V YN
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL-DSLISSGETLDIVLYNI 473
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
+I + + + L + ET P + T N+++ +CK A ++ +G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 398 LSPNHMAYKYLI 409
L+P+ ++Y L+
Sbjct: 534 LAPSVVSYTTLM 545
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 40/341 (11%)
Query: 111 WAGRQPRFNHTRATFAAIFRILSRA-KLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAI 169
W + + T++ + L R KL +L FLR + V ++++ GY
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSIMSGYCK 234
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL--------------------VEDN--- 206
G D+A F + GL + +++L+N L VE +
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 207 -------------YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLV 253
A++VI + + + +T I++ C+ G ++ L ++
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 254 GSGKELHG-SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
G EL+ + ++ LC + R + A+ L + G P AY + I GL + G+
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNA 372
D AL + + D +P+ + L+ L ++ L + LL + + D+V N
Sbjct: 415 DMALWLYDEMCDKR-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 373 VLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
V+ + K G + ALEL+ + G++P+ + LI C
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 110/314 (35%), Gaps = 78/314 (24%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVI 233
D +L++ KM+ Q L++ Y+ +L E + +DV +I+ K ++ T V+
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD--KMWDVY-KEIKDKNEHTYST---VV 194
Query: 234 KHLCKQGRLEEVEAYLN------------------------GLVGSGKELHGSEV----- 264
LC+Q +LE+ +L G V K + +
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 265 ------NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEF 318
N L+ LC A+EL + G P Y + +G G + A E
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 319 FRQKRDSEGYVPSHVRYNTLICR------------------------------------L 342
R D +G P + Y L+C L
Sbjct: 315 IRDMLD-KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGL 373
Query: 343 LRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
+ R+++ L M PD+V + V+ CKLG D+AL LY + PN
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 403 MAYKYLILTLCWDG 416
+ L+L LC G
Sbjct: 434 RTHGALLLGLCQKG 447
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 99/279 (35%), Gaps = 12/279 (4%)
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNA 210
R+ R H L++G G A L + G LD Y+++++ + + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
++ I S T +I CK + E L+ + G L+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK-------- 322
+ + EL RE G P Y + +GL RG + + R++
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 323 -RD--SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
RD SEG P + YNT+I L R L+ + L M T N ++ C
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCP 418
G A S + +S + AY LI C G P
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVRE 286
V + ++ LCK G + + G + N ++ C S R+ A +L+R
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 287 FGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLREN 346
P + I V+ ++ EA E +++ + P+ + YN++I +++
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF-PTTITYNSMIDGFCKQD 129
Query: 347 RLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYK 406
R++D +L M PD+VT + ++ +CK D +E++ + G+ N + Y
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 407 YLILTLCWDG 416
LI C G
Sbjct: 190 TLIHGFCQVG 199
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 206 NYQNAFDVIANQIRRKG-YESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV 264
N QN F ++ KG + + +T +I C GR + + L ++ K+++ V
Sbjct: 28 NAQNLF----TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE--KQINPDIV 81
Query: 265 NF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
F L+ + A E+ +E FP Y I G + R+D+A
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML-DS 140
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
S+G P V ++TLI + R+++ + +M+ + + VT ++ FC++G
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
D A +L + G++P+++ + ++ LC
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLC 231
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 34/338 (10%)
Query: 89 VLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF 148
VLR S+G FF WA Q + H+ T+ A+ +L + + L+ + + +
Sbjct: 138 VLRRFSNGWNQA-----YGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM 192
Query: 149 SRGRVTHKVRFHDTL---VVGYAIAGKPDIALHLFGKM-RFQGLDLDGFGYHVLLNSLVE 204
++ + V DT+ + A +GK + A+ F +M + G+ D + L+++LV+
Sbjct: 193 NKNEESKLVTL-DTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVK 251
Query: 205 DN--------YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSG 256
+N + FD I R T I+I CK + ++ A ++ + +
Sbjct: 252 ENSIEHAHEVFLKLFDTIKPDAR--------TFNILIHGFCKARKFDDARAMMDLMKVT- 302
Query: 257 KELHGSEVNF--LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDE 314
E V + V C F R E++ E +G P Y + + L + ++ E
Sbjct: 303 -EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAE 361
Query: 315 ALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVL 374
AL + +K +G VP Y++LI L + R D + DM D++ N ++
Sbjct: 362 ALGVY-EKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
Query: 375 CFFCKLGMADVALEL---YSSRSQFGLSPNHMAYKYLI 409
++AL L SPN Y L+
Sbjct: 421 SAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L G+ + G A + M +GL D Y +LL + + V+ +
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 220 RKGYE--SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF 277
+G+E S + +++ LCK GR++E + N + G + ++ LC +F
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 278 ERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
+ A+ L E P +G + GL + G L EA S G V YN
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL-DSLISSGETLDIVLYNI 473
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFG 397
+I + + + L + ET P + T N+++ +CK A ++ +G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 398 LSPNHMAYKYLI 409
L+P+ ++Y L+
Sbjct: 534 LAPSVVSYTTLM 545
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 40/328 (12%)
Query: 124 TFAAIFRILSRA-KLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGK 182
T++ + L R KL +L FLR + V ++++ GY G D+A F
Sbjct: 189 TYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 183 MRFQGLDLDGFGYHVLLNSL--------------------VEDN---------------- 206
+ GL + +++L+N L VE +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 207 YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG-SEVN 265
A++VI + + + +T I++ C+ G ++ L ++ G EL+ +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDS 325
++ LC + R + A+ L + G P AY + I GL + G+ D AL + + D
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 326 EGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADV 385
+P+ + L+ L ++ L + LL + + D+V N V+ + K G +
Sbjct: 428 R-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 386 ALELYSSRSQFGLSPNHMAYKYLILTLC 413
ALEL+ + G++P+ + LI C
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYC 514
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 110/314 (35%), Gaps = 78/314 (24%)
Query: 174 DIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVI 233
D +L++ KM+ Q L++ Y+ +L E + +DV +I+ K ++ T V+
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD--KMWDVY-KEIKDKNEHTYST---VV 194
Query: 234 KHLCKQGRLEEVEAYLN------------------------GLVGSGKELHGSEV----- 264
LC+Q +LE+ +L G V K + +
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 265 ------NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEF 318
N L+ LC A+EL + G P Y + +G G + A E
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 319 FRQKRDSEGYVPSHVRYNTLICR------------------------------------L 342
R D +G P + Y L+C L
Sbjct: 315 IRDMLD-KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGL 373
Query: 343 LRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNH 402
+ R+++ L M PD+V + V+ CKLG D+AL LY + PN
Sbjct: 374 CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 433
Query: 403 MAYKYLILTLCWDG 416
+ L+L LC G
Sbjct: 434 RTHGALLLGLCQKG 447
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 99/279 (35%), Gaps = 12/279 (4%)
Query: 152 RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNA 210
R+ R H L++G G A L + G LD Y+++++ + + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
++ I S T +I CK + E L+ + G L+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK-------- 322
+ + EL RE G P Y + +GL RG + + R++
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 323 -RD--SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCK 379
RD SEG P + YNT+I L R L+ + L M T N ++ C
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 380 LGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCP 418
G A S + +S + AY LI C G P
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
F R +RG +T R + +L+ YA+ D AL KM+ +G+++ Y V++
Sbjct: 332 FERMRARG-ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 204 EDNYQNAFDVIANQIRR--KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
+ + A D ++ +R K + + I+ H C+ +E EA + + G +
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH-CQTCNMERAEALVREMEEEGIDAPI 449
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
+ + ++ ++ + + + G P YG I + G++ +ALE R
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
++ EG + Y+ +I ++ + + + DM + PD++ N ++ FC +G
Sbjct: 510 MKE-EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLI 409
D A++ + P + +I
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 110/294 (37%), Gaps = 10/294 (3%)
Query: 95 HG-GGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRV 153
HG GD+ L+ FD R+ T TF + L + ++ L + + V
Sbjct: 597 HGYAKSGDMRRSLEVFDMM-RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDN-YQNAFD 212
+ + ++ GYA G A F +++ +GLD+D F Y LL + + Q+A
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 213 VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLC 272
V R + I+I ++G + E + + G + +
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 273 DSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSH 332
+ RA + + E G P Y I+G R ++AL + + + + G P
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK-AMGIKPDK 834
Query: 333 VRYNTLICRLLRENRLNDVYY------LLMDMNETCTLPDMVTMNAVLCFFCKL 380
Y+ L+ LL + + Y + +M E + DM T CK+
Sbjct: 835 AVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKI 888
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 105/274 (38%), Gaps = 2/274 (0%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
+R+ + + + T++ GY + L +F +++ G Y L+N
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 204 EDNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + ++ ++ +G + ++ T ++I K A +V G +
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N ++ C +RA++ V+E P + I G + G + +LE F
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
R G VP+ +N LI L+ + ++ +L +M + T ++ + +G
Sbjct: 616 RRC-GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A E ++ GL + Y+ L+ C G
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 31/295 (10%)
Query: 99 DGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVR 158
+ D C F+WA +QPRF H ++ R L AK+ + D + + R
Sbjct: 149 EEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNEN 208
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKM-RFQGLDLDGF--GYHVLLNSLVEDNYQNAFDVIA 215
+++++ + AGK A+++F M + L+ YH+L +L+
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLG----------- 257
Query: 216 NQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSN 275
+G S++ +V +E V + +V SG E +N LV S
Sbjct: 258 -----RGNNSYINHVY----------METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 276 RFERAVELVREFGTS-GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVR 334
A+ + + P Y I GL GR A E + + +G+VP+
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMK-GKGFVPNGKS 361
Query: 335 YNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
YN+L+ ++D L +M E + D ++ ++ C+ G D A L
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRL 416
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGS----GKELHGSEVNF--LVGVLCDSNRFERA 280
VT I+I LCK R++E + G G + ++F L+ LC R + A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 281 VEL-VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
EL VR P Y I G R G+L+ A E + ++ E P+ V NT++
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIV 448
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ R + LN MDM + ++VT ++ C + + A+ Y + G S
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 400 PNHMAYKYLILTLC 413
P+ Y LI LC
Sbjct: 509 PDAKIYYALISGLC 522
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 5/253 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L+ GY AGK + A + +M+ + + + ++ + + N V +
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 220 RKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
++G + +V + + H C +E+ + ++ +G L+ LC R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 279 RAVELVREFGTSGSFPLEN-AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
A+ +V + G F L+ AY + I ++ E + EG P + YNT
Sbjct: 529 DAIRVVEKL-KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSITYNT 586
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS-QF 396
LI + V ++ M E P + T AV+ +C +G D AL+L+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 397 GLSPNHMAYKYLI 409
++PN + Y LI
Sbjct: 647 KVNPNTVIYNILI 659
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 87/236 (36%), Gaps = 3/236 (1%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
F + V V + TL+ + A++ + KM G D Y+ L++ L
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 204 EDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + + +++ G+ + ++I C + E+V L + GK+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N L+ FE ++ + G P YG I G LDEAL+ F+
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFC 378
P+ V YN LI + L +M P++ T NA+ F C
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL--FKC 696
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGS----GKELHGSEVNF--LVGVLCDSNRFERA 280
VT I+I LCK R++E + G G + ++F L+ LC R + A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 281 VEL-VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
EL VR P Y I G R G+L+ A E + ++ E P+ V NT++
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIV 448
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ R + LN MDM + ++VT ++ C + + A+ Y + G S
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 400 PNHMAYKYLILTLC 413
P+ Y LI LC
Sbjct: 509 PDAKIYYALISGLC 522
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 5/253 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L+ GY AGK + A + +M+ + + + ++ + + N V +
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 220 RKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
++G + +V + + H C +E+ + ++ +G L+ LC R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 279 RAVELVREFGTSGSFPLE-NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
A+ +V + G F L+ AY + I ++ E + EG P + YNT
Sbjct: 529 DAIRVVEKL-KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSITYNT 586
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS-QF 396
LI + V ++ M E P + T AV+ +C +G D AL+L+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 397 GLSPNHMAYKYLI 409
++PN + Y LI
Sbjct: 647 KVNPNTVIYNILI 659
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 97/267 (36%), Gaps = 1/267 (0%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
F + V V + TL+ + A++ + KM G D Y+ L++ L
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 204 EDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + + +++ G+ + ++I C + E+V L + GK+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N L+ FE ++ + G P YG I G LDEAL+ F+
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
P+ V YN LI + L +M P++ T NA+ +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L+L + PN + + L+
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILM 729
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 121/313 (38%), Gaps = 42/313 (13%)
Query: 140 LILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLL 199
L L R ++ V L+ GY AG ++A+ L+ +MR + L+ Y L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 200 NSLVED-NYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKE 258
+ + Q A ++ + + + + + +I ++G + +L ++ G
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 259 LHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP-------LENAY------------ 299
L + ++ LC + + + A E+V + S P + NAY
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 300 ----------------GLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLL 343
I G+ + G+L EA+ +F ++ ++ V Y LI L
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND------VMYTVLIDALC 414
Query: 344 RENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHM 403
+E +V L ++E +PD + + CK G A +L + Q GL + +
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 404 AYKYLILTLCWDG 416
AY LI L G
Sbjct: 475 AYTTLIYGLASKG 487
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 248 YLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLV 307
+L LV G H S N +V +C + + A ++V G P +Y I G
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 308 RGGRLDEALEFFRQKRDSEGYV--PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
R G + A R S G++ P V +N+L + L++V+ + M + C+ P
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-P 161
Query: 366 DMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
++VT + + FCK G +AL+ + S + LSPN + + LI C G
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAG 212
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 227 VTNVIVIKHLCKQGRLEEVEAYLNGLVGS----GKELHGSEVNF--LVGVLCDSNRFERA 280
VT I+I LCK R++E + G G + ++F L+ LC R + A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 281 VEL-VREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
EL VR P Y I G R G+L+ A E + ++ E P+ V NT++
Sbjct: 390 EELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIV 448
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
+ R + LN MDM + ++VT ++ C + + A+ Y + G S
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 400 PNHMAYKYLILTLC 413
P+ Y LI LC
Sbjct: 509 PDAKIYYALISGLC 522
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 5/253 (1%)
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
++ L+ GY AGK + A + +M+ + + + ++ + + N V +
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 220 RKGYESHVTNVIVIKH-LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
++G + +V + + H C +E+ + ++ +G L+ LC R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 279 RAVELVREFGTSGSFPLE-NAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNT 337
A+ +V + G F L+ AY + I GL E + + EG P + YNT
Sbjct: 529 DAIRVVEKL-KEGGFSLDLLAYNMLI-GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 338 LICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRS-QF 396
LI + V ++ M E P + T AV+ +C +G D AL+L+
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 397 GLSPNHMAYKYLI 409
++PN + Y LI
Sbjct: 647 KVNPNTVIYNILI 659
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 97/267 (36%), Gaps = 1/267 (0%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
F + V V + TL+ + A++ + KM G D Y+ L++ L
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 204 EDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGS 262
+ + + +++ G+ + ++I C + E+V L + GK+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI 582
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
N L+ FE ++ + G P YG I G LDEAL+ F+
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
P+ V YN LI + L +M P++ T NA+ +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L+L + PN + + L+
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILM 729
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 115/303 (37%), Gaps = 10/303 (3%)
Query: 119 NHTRATFAAIFRILSRAKLRPLILDFLRKF-SRGRVTHKVRFH---DTLVVGYAIAGKPD 174
N R + A+ LS + FLRK RG + F+ L+ G+ +
Sbjct: 317 NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVE--- 373
Query: 175 IALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV-IVI 233
+F +G+ GY VL+ +L+ + D Q+ G S V + VI
Sbjct: 374 -TCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
LCK R+E +L + G + N + ++ ++ + G
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
P + L I L R + +A + F++ + G P+ + YN LI +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEW-GIEPNEITYNILIRSCCSTGDTDRSVK 551
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
L M E PD+ NA + FCK+ A EL + + GL P++ Y LI L
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
Query: 414 WDG 416
G
Sbjct: 612 ESG 614
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 134/327 (40%), Gaps = 30/327 (9%)
Query: 106 LKFFDWAGRQPRFNHTRATFAAIFRILSRAKL----RPLILDFLRKFSRGRVTHKVRFHD 161
L FF W+ H ++A IL +A+L R LI + S D
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALI-----ESSLLNSPPDSDLVD 151
Query: 162 TLVVGYAIAGKP----DIALHLFGKMRFQGLDLD--------GFGYHVL-LNSLVEDNYQ 208
+L+ Y I+ D+ + + K+R+ L D GF V+ LN+L+ + +
Sbjct: 152 SLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSK 211
Query: 209 NAFD-----VIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSE 263
+ D + I ++ Y + +T I+I+ LCK+GRL+EV L+ + G + L
Sbjct: 212 SKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGK-RCLPSVI 270
Query: 264 VNF-LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQK 322
VN LV + + R E ++ L++ Y + + + G L A + F +
Sbjct: 271 VNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEM 330
Query: 323 RDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGM 382
G+ + Y + + + + LL +M E+ P T N ++ F + G
Sbjct: 331 L-QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 383 ADVALELYSSRSQFGLSPNHMAYKYLI 409
+ LE GL P+ A+ ++
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/294 (17%), Positives = 120/294 (40%), Gaps = 2/294 (0%)
Query: 117 RFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIA 176
R T + ++L + ++D L + R V + +LV + + +
Sbjct: 229 RIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEES 288
Query: 177 LHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKH 235
+ L ++ + + +D GY +++ + ++ + + +++ ++G+ ++ + ++
Sbjct: 289 MSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRV 348
Query: 236 LCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPL 295
C++G ++E E L+ + SG + N L+G E+ +E T G P
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPS 408
Query: 296 ENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL 355
+A+ ++ + + ++ A E + D +G+VP Y+ LI + N ++ L
Sbjct: 409 CSAFNEMVKSVSKIENVNRANEILTKSID-KGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Query: 356 MDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+M P +++ C G + + + + PN Y LI
Sbjct: 468 YEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 128/319 (40%), Gaps = 20/319 (6%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D L+FF+W R+ F HT TF + IL + + + + T V H
Sbjct: 60 DWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGN--TESVPNH 117
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGF------GYHVLLNSLVEDNYQNAFDVI 214
V + I K + HL + LD F ++ L+++L E + + +
Sbjct: 118 ----VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEEL 173
Query: 215 --ANQIRRKGYESHVTNV--IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
+ G+ T + ++++ K G + + Y + G + + +
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 271 LCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVP 330
+C S + +AV+L +E + AY IR + ++ + FR+ R+ G P
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE-RGCEP 292
Query: 331 SHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELY 390
+ +NT+I L + R+ D Y +L +M + PD +T +C F +L L L+
Sbjct: 293 NVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSIT---YMCLFSRLEKPSEILSLF 349
Query: 391 SSRSQFGLSPNHMAYKYLI 409
+ G+ P Y L+
Sbjct: 350 GRMIRSGVRPKMDTYVMLM 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 170 AGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-T 228
+GKP A+ L+ +M+ + + LD Y+ ++ ++ + ++R +G E +V T
Sbjct: 237 SGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT 296
Query: 229 NVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFG 288
+ +IK LC+ GR+ + L+ + G + + +C +R E+ E++ FG
Sbjct: 297 HNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS------ITYMCLFSRLEKPSEILSLFG 350
Query: 289 ---TSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRE 345
SG P + Y + +R R G L L ++ ++S G P YN +I L+++
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES-GDTPDSAAYNAVIDALIQK 409
Query: 346 NRLN 349
L+
Sbjct: 410 GMLD 413
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 131/355 (36%), Gaps = 30/355 (8%)
Query: 87 PFVLRVLSHGGGDGDILSCLKFFDWA----GRQPRFNHTRATFAAIFRILSRAKLRPLIL 142
P + RVL D + FF W G++P + + + IL +K PL +
Sbjct: 80 PEISRVLLRFQSDAS--RAITFFKWVKFDLGKRPNVGN----YCLLLHILVSSKKFPLAM 133
Query: 143 DFLRKF----SRGRVTHKVRF--------------HDTLVVGYAIAGKPDIALHLFGKMR 184
FL + S+ R D LV GY G + +F ++
Sbjct: 134 QFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVL 193
Query: 185 FQGLDLDGFGY-HVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLE 243
G + H+L L D ++ + V + R + + T I+ C
Sbjct: 194 DSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFR 253
Query: 244 EVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWI 303
EV+ +L + G E N LV C R + A L + P Y I
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 304 RGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCT 363
+GL + GR+ EA + F + D G P + YNTLI +E + LL +M
Sbjct: 314 KGLCKDGRVREAHQTFHRMVD-RGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Query: 364 LPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDGCP 418
+PD T ++ F + G A+ + + +LI++LC +G P
Sbjct: 373 VPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKP 427
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 115/311 (36%), Gaps = 56/311 (18%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D L L+FF+WA + +H+ T A + L++ RKF
Sbjct: 94 DYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKN----------RKFKSAESI----LR 139
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIR 219
D LV G G+DL + LL S E D+ FD +
Sbjct: 140 DVLVNG--------------------GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFA 179
Query: 220 R-KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
K + + + +K +E AY++ L+G G R +
Sbjct: 180 HLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG-------------------RVD 220
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A+ RE P + + G R G+LD+ +E Q + G+ + V YNTL
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL-QDMERLGFRATDVSYNTL 279
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + L+ L M ++ P++VT N ++ FC+ A +++ +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 399 SPNHMAYKYLI 409
+PN + Y LI
Sbjct: 340 APNTVTYNTLI 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTN 229
G+ DIAL + +MR + + + +++++ + + + R G+ + V+
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
+I C++G L N + SG + + N L+ C + + + A ++ E
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
P Y I G + G + A F+ + G + YN LI L ++ +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFY-EDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ ++++ +P+ T +A++ C AD ELY S + G PN + L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 410 LTLC 413
C
Sbjct: 456 SAFC 459
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 115/311 (36%), Gaps = 56/311 (18%)
Query: 101 DILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFH 160
D L L+FF+WA + +H+ T A + L++ RKF
Sbjct: 94 DYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKN----------RKFKSAESI----LR 139
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNAFDVIANQIR 219
D LV G G+DL + LL S E D+ FD +
Sbjct: 140 DVLVNG--------------------GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFA 179
Query: 220 R-KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
K + + + +K +E AY++ L+G G R +
Sbjct: 180 HLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG-------------------RVD 220
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
A+ RE P + + G R G+LD+ +E Q + G+ + V YNTL
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL-QDMERLGFRATDVSYNTL 279
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I + L+ L M ++ P++VT N ++ FC+ A +++ +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 399 SPNHMAYKYLI 409
+PN + Y LI
Sbjct: 340 APNTVTYNTLI 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 171 GKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTN 229
G+ DIAL + +MR + + + +++++ + + + R G+ + V+
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
+I C++G L N + SG + + N L+ C + + + A ++ E
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
P Y I G + G + A F+ + G + YN LI L ++ +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFY-EDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ ++++ +P+ T +A++ C AD ELY S + G PN + L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 410 LTLC 413
C
Sbjct: 456 SAFC 459
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 20/274 (7%)
Query: 132 LSRAKLRPLILDFLRKFSRGRVTHKV-------------RFHDTLVVGYAIAGKPDIALH 178
LS + L ILD L K R H+V + ++ L+ YA A K D A+
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 179 LFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRK-GYESHVTNVIVIKHLC 237
+F + + G+D D +H LL L + + + RR+ G + N+I + C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMI-LNGWC 258
Query: 238 KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLEN 297
G + E + + ++ S ++ L + +A+EL R + P
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 298 AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMD 357
I L R+ EALE FR+ + +G P+ V YN+L+ L + R V+ L+ +
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISE-KGPDPNVVTYNSLLKHLCKIRRTEKVWELVEE 377
Query: 358 MN---ETCTLPDMVTMNAVLCFFCKLGMADVALE 388
M +C+ P+ VT + +L + + D+ LE
Sbjct: 378 MELKGGSCS-PNDVTFSYLLKYSQRSKDVDIVLE 410
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Query: 230 VIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGT 289
V++I+ K G ++E + G E N L V+ R+ A + +
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 290 SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLN 349
G P + Y L + G RL+ AL FF + + G P +NT+I R +++
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK-TRGISPDDATFNTMINGFCRFKKMD 307
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ L ++M P +V+ ++ + + D L ++ G+ PN Y L+
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 410 LTLCWDG 416
LC G
Sbjct: 368 PGLCDAG 374
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 108/281 (38%), Gaps = 43/281 (15%)
Query: 105 CLKFFDWAGRQPRFNHTRATFAAIFRILSR-AKL---RPLILDFLRKFSRGRVTHKVRFH 160
L+FF W R H R T + ++L +KL R ++LD K V
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG----VPWDEDMF 188
Query: 161 DTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRR 220
L+ Y AG ++ +F KM+ G++ Y+ L F VI
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSL------------FKVI------ 230
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
++GR + Y N +V G E N ++ S R E A
Sbjct: 231 ----------------LRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+ + T G P + + I G R ++DEA + F + + ++ PS V Y T+I
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK-IGPSVVSYTTMIK 333
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
L +R++D + +M + P+ T + +L C G
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 202 LVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR-LEEVEAYLNGLVGSGKELH 260
L D+ + D I + RR+ I +C R +E L+GL G
Sbjct: 30 LKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPD 89
Query: 261 GSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRG-------GRLD 313
++ ++ LCD+ RF+ A F SG P E + I L+ G +
Sbjct: 90 SLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIH 149
Query: 314 EALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
+ F ++ +VPS YN L+ +L R+ D + L+ DM LPD+VT +
Sbjct: 150 RLIGFKKE------FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL 203
Query: 374 LCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ +C++ +VA +++ G+ PN + LI
Sbjct: 204 IGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 2/233 (0%)
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDN-YQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGR 241
M+ +GL Y+ +++ L +D A+ ++ + + S T ++++ LCK+
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 242 LEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGL 301
+ L ++ N + LC + + ++ P E
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 302 WIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMD-MNE 360
I GL + GR+D+A++ + P V NT++C LL + R + +L M E
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 361 TCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
P +V NAV+ KL D A+ ++ + ++ + Y +I LC
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 34/256 (13%)
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
F+ TL+ Y A + A+ F +M G ++ LLN+ +
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACL--------------- 148
Query: 219 RRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFE 278
H N + L +E+ N ++ K +G L+ CDS E
Sbjct: 149 -------HSKNFDKVPQL-----FDEIPQRYNKII-PDKISYG----ILIKSYCDSGTPE 191
Query: 279 RAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTL 338
+A+E++R+ G A+ + L + G L+ A + + +G + YN
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMV-KKGCELDNAAYNVR 250
Query: 339 ICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGL 398
I +E+ V L+ +M+ PD ++ N ++ +C+ GM D A ++Y
Sbjct: 251 IMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC 309
Query: 399 SPNHMAYKYLILTLCW 414
+PN ++ LI LC+
Sbjct: 310 APNAATFRTLIFHLCY 325
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 115/310 (37%), Gaps = 37/310 (11%)
Query: 144 FLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLV 203
L+K ++ + ++ L+ +A AG + AL + K+R GL D + +L+ L
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 204 EDNYQNAFDVIANQIRRKGY--ESHVTNVI------------------------------ 231
+ + + ++ R + H VI
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 232 ---VIKHLCKQGRLEEVEAYLNGLVG-SGKELHGSEVNFLVGVLCDSNRFERAVELVREF 287
VI ++G E E G SG+ E N ++ + E+A+ L +
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENR 347
G++P E Y + L +DEA + DS G P Y +I +R
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGL 600
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
L+D L M +T P+ V +++ F + GM + A++ + + G+ NH+
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 408 LILTLCWDGC 417
LI GC
Sbjct: 661 LIKAYSKVGC 670
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 7/227 (3%)
Query: 188 LDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESH-VTNVIVIKHLCKQGRLEEVE 246
L+ D Y+ +LN+ V A + ++R+ G + T + ++ + + G+ + V
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 247 AYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGL 306
+ + SG+ LV L + E AVE VR+ G + Y L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 307 VRGGRL-DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLP 365
GR D LE R KR E P + + LI L ++D + M + C P
Sbjct: 457 CNNGRWCDAMLEVGRMKR-LENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCD-P 514
Query: 366 DMVTMNAVLCFFCKLGMADVALELYS---SRSQFGLSPNHMAYKYLI 409
++ T N +L + + M A EL+ SR + L PN Y +++
Sbjct: 515 NIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFML 561
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 236 LCKQGRLEEVEAYLNGLVGSGKELHGSEV---NFLVGVLCD-SNRFERAVELVREFGTSG 291
LC+ G +E+ E ++ + K+L +V N ++ C+ A + RE G
Sbjct: 234 LCRHGHIEKAEEFM----LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYC 289
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P +++Y I + G L ++L + + + G P YN+L+ L RE+ ++
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK-KRGLAPGIEVYNSLVYVLTREDCFDEA 348
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
L+ +NE PD VT N+++ C+ G DVA + ++ LSP
Sbjct: 349 MKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 2/256 (0%)
Query: 162 TLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVED-NYQNAFDVIANQIRR 220
TLV G+ A + A LF M G+D + + Y+ L++ + N A +++
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 221 KGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERA 280
T I+I LC + ++ E + + N L+ C E+A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
++L E SG P + I G + A+ + + +G VP V Y LI
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE-MTIKGIVPDVVTYTALID 487
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+E + + L DM E P+ T ++ F K G VA++ Y +Q
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 401 NHMAYKYLILTLCWDG 416
NH+ + LI LC +G
Sbjct: 548 NHVGFTCLIEGLCQNG 563
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 132/320 (41%), Gaps = 12/320 (3%)
Query: 103 LSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTH---KVRF 159
L L FF W +Q + H F + ++ + +D R R +++ K R
Sbjct: 53 LKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSID--RIIERLKISGCEIKPRV 110
Query: 160 HDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIR 219
L+ + D A+ ++ M G + +++++ + N N I IR
Sbjct: 111 FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR 170
Query: 220 RKGYESHVTNVIVIKHLCKQG---RLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNR 276
+ + S I + H C +G L V+ L ++G G + ++ + C +
Sbjct: 171 FRNFFSFD---IALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGC 227
Query: 277 FERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYN 336
A ++V SG N + + + G R G +A++ F K G P+ V Y
Sbjct: 228 VSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF-NKMIQIGCSPNLVTYT 286
Query: 337 TLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQF 396
+LI + +++ + +L + PD+V N ++ + +LG + A ++++S +
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKR 346
Query: 397 GLSPNHMAYKYLILTLCWDG 416
L P+ + ++ +LC G
Sbjct: 347 KLVPDQYTFASILSSLCLSG 366
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 179 LFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLC 237
+ +M +G+ + + ++++ ++ + + ++ +G V+ I I+ LC
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 238 KQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLEN 297
K+ + +E +A L+G++ +G + + + L+ C+ + FE A +L + G P
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 298 AYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMD 357
Y I L +GG + AL ++ + + +VPS +L+ L +++++ + L+
Sbjct: 329 CYFTLIYYLCKGGDFETALSLCKESME-KNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQ 387
Query: 358 MNETCT 363
+ E T
Sbjct: 388 VKEKFT 393
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 2/235 (0%)
Query: 176 ALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHV-TNVIVIK 234
AL KM G F Y+ ++ L ++N + N I+ + V T +IV+
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 235 HLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFP 294
LCK+ + A ++ + G + + ++G L R A E + SG P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 295 LENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYL 354
E AY + I R GR+DEA E + PS Y LI ++ +
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVV-KHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 355 LMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
L M E P++V A++ F K G + L+ + + +H+AY L+
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLL 729
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 121/300 (40%), Gaps = 8/300 (2%)
Query: 118 FNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIAL 177
F H +++++ L++++ + LR V + L+ Y AG D A+
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 178 HLFGKMRFQGLDLDGFGYHVLLNSLVE----DNYQNAFDVIANQIRRKGYESHVTNVIVI 233
+F K+ + L+N LV+ + ++ FD A +R + + V+ I+I
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-AKDMRLR--PNSVSFNILI 193
Query: 234 KHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSF 293
K + E + ++ + N L+G LC ++ +A L+ +
Sbjct: 194 KGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR 253
Query: 294 PLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYY 353
P +GL ++GL G +EA + + G P V Y L+ L + R+++
Sbjct: 254 PNAVTFGLLMKGLCCKGEYNEAKKLMFD-MEYRGCKPGLVNYGILMSDLGKRGRIDEAKL 312
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
LL +M + PD+V N ++ C A + + G PN Y+ +I C
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 8/260 (3%)
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNA-- 210
T V + L+ Y GK + A +F +M+ G + Y ++L + VE D ++ A
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 211 -FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
F+ + ++ + ++I K G E+ + +VG G N L+
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
++ ++ + S P +Y L I+ R R +EAL F + D+ G
Sbjct: 298 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVR 353
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P+H YN L+ + + M PD+ + +L + + A +
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 390 YSSRSQFGLSPNHMAYKYLI 409
+ G PN + Y LI
Sbjct: 414 FKRIKVDGFEPNIVTYGTLI 433
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 8/260 (3%)
Query: 154 THKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE-DNYQNA-- 210
T V + L+ Y GK + A +F +M+ G + Y ++L + VE D ++ A
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 211 -FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
F+ + ++ + ++I K G E+ + +VG G N L+
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 270 VLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
++ ++ + S P +Y L I+ R R +EAL F + D+ G
Sbjct: 291 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVR 346
Query: 330 PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALEL 389
P+H YN L+ + + M PD+ + +L + + A +
Sbjct: 347 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 390 YSSRSQFGLSPNHMAYKYLI 409
+ G PN + Y LI
Sbjct: 407 FKRIKVDGFEPNIVTYGTLI 426
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 280 AVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLI 339
A+++ + +G P +YG + L +G DEA + G P+ Y T+
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKV-GIEPNLYAYTTMA 535
Query: 340 CRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLS 399
L + + N + LL +M P +VT NAV+ + G++ VA E + +
Sbjct: 536 SVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVE 595
Query: 400 PNHMAYKYLILTLCWDGCP 418
PN + Y+ LI L D P
Sbjct: 596 PNEITYEMLIEALANDAKP 614
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 232 VIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSG 291
+I LC G+ ++ + L SG E S L+ C S R + A+ + E +G
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 292 SFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDV 351
P Y + G ++ ++ EA + F +K EG S YN LI L R R
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLF-EKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 352 YYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLIL 410
+ L D+ + D +T + V C+ G + A++L G S + + L++
Sbjct: 414 FTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLI 472
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 125/333 (37%), Gaps = 32/333 (9%)
Query: 86 EPFVLRVLSHGGGDGDILSCLKFFDWA-GRQPRFNHTRATFAAIFRILSRAKLRPLILDF 144
EP VL++L D L FF W +P + H+ ++ IFR + R L + D
Sbjct: 57 EPVVLQILRRNSIDPS--KKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDL 114
Query: 145 LRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE 204
L V L+ +GK + AL + M G L+ Y +L +LV+
Sbjct: 115 LGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVK 174
Query: 205 D-NYQNAFDVIANQIRRKGYESH--VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
+ A ++ + S VI++ +L + E+ LVG +
Sbjct: 175 KHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNEL------LVGLRRADMR 228
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
SE + L RF+ F T +Y + I G G LD AL F++
Sbjct: 229 SEFKRVFEKLKGMKRFK--------FDTW-------SYNICIHGFGCWGDLDAALSLFKE 273
Query: 322 KRD-----SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCF 376
++ + P YN+LI L + D + ++ + PD T ++
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQG 333
Query: 377 FCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
CK D A+ +Y G P+ + Y L+
Sbjct: 334 CCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 265 NFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRD 324
N L+ VLC + + A+ + E SG P + Y + I+G + R+D+A+ + + +
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ- 351
Query: 325 SEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMAD 384
G+VP + YN L+ L+ ++ + L M + T N ++ + G A+
Sbjct: 352 YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAE 411
Query: 385 VALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
L+ + G + + + + L LC +G
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 15/316 (4%)
Query: 109 FDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKFSRGRVTHKVRFHDTLVVGYA 168
F + F ++A R L AK I + L+ + F +++ Y
Sbjct: 74 FKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYG 133
Query: 169 IAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE----DNYQNAFDVIANQIRRKGYE 224
+G + A LF +M + ++ LL++ V D F + ++ G
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL---GIT 190
Query: 225 SH-VTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGVLCDSNRF---ERA 280
VT +IK LC++G ++++ + L +G E N L+ F +R
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+L++ S P +Y +RGL R + +AL + +EG P YN LI
Sbjct: 251 WDLMKSKNLS---PNIRSYNSRVRGLTRNKKFTDALNLIDVMK-TEGISPDVHTYNALIT 306
Query: 341 RLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSP 400
+N L +V +M E PD VT ++ CK G D A+E+ + L
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS 366
Query: 401 NHMAYKYLILTLCWDG 416
YK ++ L G
Sbjct: 367 RPNMYKPVVERLMGAG 382
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 264 VNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKR 323
+N V LC ERA L+ + G P Y I+G R +DEA R+ R
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 324 DSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMA 383
++ G P YN+LI + LN V L +M + PDM + N ++ + KLG
Sbjct: 76 EA-GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 384 DVALE-LYSSRSQFGLSPNHMAYKYLILTLCWDG 416
A + L+ GL P Y L+ LC G
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 114/309 (36%), Gaps = 40/309 (12%)
Query: 146 RKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVE- 204
R+ + V +++L+ G A + L LF +M GL D + Y+ L++ +
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 205 DNYQNAFDVIANQIRRKGYESHV-TNVIVIKHLCKQGRLEEVEAYLNGLVGSGK-ELHGS 262
+ AF ++ I G + T I++ LCK G + L K EL
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELM-- 189
Query: 263 EVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFF--- 319
N L+ LC S R ++RE SG P Y ++ + R+++ L+ F
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 320 --------------------RQKRDSEGYVPSH------------VRYNTLICRLLRENR 347
+ R E Y H V YNTL+ ++
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 348 LNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKY 407
L+ V LL ++ PD T ++ +G A + + + G+ P+ +
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 408 LILTLCWDG 416
LI LC G
Sbjct: 370 LIDGLCKAG 378
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 114/286 (39%), Gaps = 17/286 (5%)
Query: 144 FLRKFSRG-RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
RK+ G V ++ + L+ + D+A +F +M +QG D Y +L+
Sbjct: 138 IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGF 197
Query: 203 -VEDNYQNAFDVIAN---QIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYL-----NGL 252
+E + A ++ + +I +KG E V I++ LC G +++ L GL
Sbjct: 198 CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 253 VGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
+ H E S ER L+ E G+ P ++Y L G+L
Sbjct: 258 KAPKRCYHHIEAGHWES---SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL-MDMNETCTLPDMVTMN 371
E E R S+G+ P+ Y + L R +L + ++ +M + LP + N
Sbjct: 315 VEGEEVLLAMR-SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 372 AVLCFFCKLGMADVALELYSSRS-QFGLSPNHMAYKYLILTLCWDG 416
++ C G + A+ S Q N Y+ L+ LC DG
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 114/286 (39%), Gaps = 17/286 (5%)
Query: 144 FLRKFSRG-RVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
RK+ G V ++ + L+ + D+A +F +M +QG D Y +L+
Sbjct: 138 IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGF 197
Query: 203 -VEDNYQNAFDVIAN---QIRRKGY-ESHVTNVIVIKHLCKQGRLEEVEAYL-----NGL 252
+E + A ++ + +I +KG E V I++ LC G +++ L GL
Sbjct: 198 CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 253 VGSGKELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL 312
+ H E S ER L+ E G+ P ++Y L G+L
Sbjct: 258 KAPKRCYHHIEAGHWES---SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL 314
Query: 313 DEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLL-MDMNETCTLPDMVTMN 371
E E R S+G+ P+ Y + L R +L + ++ +M + LP + N
Sbjct: 315 VEGEEVLLAMR-SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 372 AVLCFFCKLGMADVALELYSSRS-QFGLSPNHMAYKYLILTLCWDG 416
++ C G + A+ S Q N Y+ L+ LC DG
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 266 FLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEA----LEFFRQ 321
L+ CDS + E+A+E++R+ G A+ + L + G +DEA +E +
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
D + V YN + +E+ V L+ +M+ PD V+ N ++ +C G
Sbjct: 239 GCDLDNTV-----YNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKG 292
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
M A ++Y Q PN ++ LI LC +G
Sbjct: 293 MMSEAKKVYEGLEQ----PNAATFRTLIFHLCING 323
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 211 FDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVGV 270
+ + Q R + VT V+ G ++ L + G + N L+
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 271 LCDSNRFERAVELVREFGT-SGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV 329
C + +RA +L+RE +G P +Y + I G + AL FF + R + G
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMR-TRGIA 555
Query: 330 PSHVRYNTLICR--LLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P+ + Y TL+ + + +L + + M MN+ D++ N ++ +C+LG+ + A
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEM-MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQ 614
Query: 388 ELYSSRSQFGLSPNHMAYKYL 408
+ S + G PN Y L
Sbjct: 615 RVVSRMKENGFYPNVATYGSL 635
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 125/332 (37%), Gaps = 15/332 (4%)
Query: 88 FVLRVLSHGGGDGDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPL-----IL 142
V+ +LS D + + FF WAG+Q + + + ++ IL K+R ++
Sbjct: 129 LVVEILSRVRNDWE--TAFTFFVWAGKQQGYVRSVREYHSMISIL--GKMRKFDTAWTLI 184
Query: 143 DFLRKFSRGRVTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSL 202
D +RKFS V + ++ Y A++ F + L++ + LL++L
Sbjct: 185 DEMRKFSPSLVNSQTLL--IMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSAL 242
Query: 203 VE-DNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHG 261
N +A +I + +++ N+++ G E E + G +
Sbjct: 243 CRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDV 302
Query: 262 SEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQ 321
+ ++ + ++L P Y + L + + EA +
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 322 KRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLG 381
+ +G P+ V YN+LI L + + + + +M E P + T +A F L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA---FMRILR 419
Query: 382 MADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+ EL + + G P Y LI LC
Sbjct: 420 TGEEVFELLAKMRKMGCEPTVETYIMLIRKLC 451
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 291 GSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE-GYVPSHVRYNTLICRLLRENRLN 349
G F +NAY + I L + GR+D+AL + G PS Y+ ++C L R+ ++
Sbjct: 102 GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPST--YHPILCSLTRKYKIE 159
Query: 350 DVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLI 409
+ + ++ M D+ N L C G + A E+ + G SP+ +Y L+
Sbjct: 160 EAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALV 219
Query: 410 LTLCWDG 416
L C G
Sbjct: 220 LGACRAG 226
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 120/300 (40%), Gaps = 44/300 (14%)
Query: 153 VTHKVRFHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFD 212
V V + +++ GY G + A+ L KM Q + +GF Y +++ L + +
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 213 VIANQIRRKGYESHVTNVIV---IKHLCKQGRLEEVEAYLNGLVGSGKELHGSEVNFLVG 269
++ ++R G E + N I+ + HL + GR++EV+ + +V G L L+
Sbjct: 455 ELSKEMRLIGVEEN--NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 270 VL---CDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRL--DEALEFFRQKR- 323
V D E ++E G +Y + I G+++ G++ D A + R+K
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVV---SYNVLISGMLKFGKVGADWAYKGMREKGI 569
Query: 324 ------------------DSEGYV------------PSHVRYNTLICRLLRENRLNDVYY 353
DSEG + PS + N ++ L ++ + +
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 354 LLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLC 413
+L M P++ T L K AD + + + +G+ + Y LI TLC
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 37/263 (14%)
Query: 183 MRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNV-IVIKHLCKQGR 241
MR +G++ D +++++NS + + ++++ G + + + IV+ LC+ G+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 242 LEEVEAYLN-----------------------------------GLVGSGKELHGSEVNF 266
+EE LN L+ G +L N
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 267 LVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSE 326
L+ LC ++A ++ + G P + + G G + +AL + ++
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA- 742
Query: 327 GYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVA 386
G P+ YNT+I L + +V L +M PD T NA++ K+G +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 387 LELYSSRSQFGLSPNHMAYKYLI 409
+ +Y GL P Y LI
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLI 825
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 195 YHVLLNSLVEDNYQNAFDVIANQIRRKGYESHVTNVIVIKHLCKQGRL--EEVEAYLNGL 252
Y+ L L N F + ++++ GY+ + I + ++ R+ E V+ Y +
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 253 VGSGKELHGSEVNFLVGVLCDSNR--FERAVELVREFGTSGSFPLENAYGLWIRGLVRGG 310
G K + + L+ L S + + R++ ++G + Y R L G
Sbjct: 326 DGPFKP-SIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 311 RLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTM 370
R DEA E + R++ GY P ++ Y+ L+ L + RL + +L M PD+ T
Sbjct: 385 RFDEAEEITKAMRNA-GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 371 NAVLCFFCKLGMADVALELYSSRSQFG 397
++ CK D AL +++ + G
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKG 470
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 131/329 (39%), Gaps = 18/329 (5%)
Query: 100 GDILSCLKFFDWAGRQPRFNHTRATFAAIFRILSRAKLRPLILDFLRKF-SRGRVTHKVR 158
G +L F + AG P T+ IF+ + + L+ + F + +
Sbjct: 147 GALLQLHGFINQAGIAPNI----ITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIA 202
Query: 159 FHDTLVVGYAIAGKPDIALHLFGKMRFQGLDLDGFGYHVLLNSLVEDNYQNAFDVIANQI 218
LV G + A+ + M +G +D Y L+ V+++ + + ++
Sbjct: 203 TFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQEL 262
Query: 219 RRK--GY--ESHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV--NFLVGVLC 272
+ K G+ + V ++ + K+ E +E Y VG ++ S + N+++ L
Sbjct: 263 KEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEA-VGENSKVRMSAMAYNYVLEALS 321
Query: 273 DSNRFERAVELVREFGTSGSFPLENA-----YGLWIRGLVRGGRLDEALEFFRQKRDSEG 327
++ +F+ A++L + P A + + + G GG+ +EA+E FRQ D +
Sbjct: 322 ENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC 381
Query: 328 YVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVAL 387
P + +N L+ +L L + L +M E PD T ++ K G D
Sbjct: 382 S-PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGA 440
Query: 388 ELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
Y + + L PN Y L L G
Sbjct: 441 AYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 281 VELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLIC 340
+EL RE G Y I+GL + G D A E F++ S+G P + YN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILLD 59
Query: 341 RLLRENRL---------NDVYYLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYS 391
L + +L D + L ++ P++VT ++ FCK G + A L+
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 392 SRSQFGLSPNHMAYKYLILTLCWDG 416
+ G P+ Y LI DG
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDG 144
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
Query: 198 LLNSLVEDNYQNAFDVIANQIRRKGYE-SHVTNVIVIKHLCKQGRLEEVEAYLNGLVGSG 256
L+N L+E I N + +G++ S +T ++ L +Q + + ++ + +G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 257 KELHGSEVNFLVGVLCDSNRFERAVELVREFGTSGSFPLENAYGLWIRGLVRGGRLDEAL 316
+ N ++ +S ++A+++ + SG P + + I+G + G+L+E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 317 EFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAVLCF 376
E P+ N L+ + ++ + + ++ M PD+VT N +
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 377 FCKLGMADVALELYSSR 393
+ ++G A ++ R
Sbjct: 505 YARIGSTCTAEDMIIPR 521
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 293 FPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYVPSHVRYNTLICRLLRENRLNDVY 352
FP Y I G + R+D+A S+G P V ++TLI + R+++
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMA-SKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 353 YLLMDMNETCTLPDMVTMNAVLCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTL 412
+ +M+ + + VT ++ FC++G D A +L + G++P+++ + ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 413 C 413
C
Sbjct: 126 C 126
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 79/223 (35%), Gaps = 37/223 (16%)
Query: 231 IVIKHLCKQGRLEEVEAYLNGLVGSGKELHGSEV---NFLVGVLCDSNRFERAVELVREF 287
+++ LCK+G + E YL + G+ V N L+ S + ++A +L E
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 288 GTSGSFPLENAYGLWIRGLVRGGRLDEALEFFRQKRDSEGYV------------------ 329
P YG I G R R+ A+E + + +E +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 330 ----------------PSHVRYNTLICRLLRENRLNDVYYLLMDMNETCTLPDMVTMNAV 373
P+ V YN+L+ + L +L M P T N
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 374 LCFFCKLGMADVALELYSSRSQFGLSPNHMAYKYLILTLCWDG 416
+F K + + LY + G SP+ + Y ++ LC DG
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439