Miyakogusa Predicted Gene

Lj4g3v0200090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0200090.1 Non Chatacterized Hit- tr|Q2PES0|Q2PES0_TRIPR
Putative receptor-like GPI-anchored protein 2
OS=Trifo,63.54,0,seg,NULL; LysM,Peptidoglycan-binding lysin domain; no
description,NULL; LysM domain,NULL; Lysin moti,CUFF.46639.1
         (370 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17120.1 | Symbols: LYM2 | lysm domain GPI-anchored protein 2...   273   2e-73
AT1G21880.2 | Symbols: LYM1 | lysm domain GPI-anchored protein 1...   136   2e-32
AT1G21880.1 | Symbols: LYM1 | lysm domain GPI-anchored protein 1...   135   4e-32
AT1G77630.1 | Symbols:  | Peptidoglycan-binding LysM domain-cont...   125   5e-29
AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | chitin elicitor recept...    52   6e-07

>AT2G17120.1 | Symbols: LYM2 | lysm domain GPI-anchored protein 2
           precursor | chr2:7459156-7460648 FORWARD LENGTH=350
          Length = 350

 Score =  273 bits (697), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 184/313 (58%), Gaps = 17/313 (5%)

Query: 13  TMLVAVLGLLAE--------AQIEAKFKCISENAPCHALADYSHPNGTTLRRIQTLFTVK 64
           T    +LGLL          AQ+   F C    + C +L  YS  N TTLR IQTLF VK
Sbjct: 3   TSCFTLLGLLVSLSFFLTLSAQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVK 62

Query: 65  YLPDILGANNLPANTTR---VAPDQVIKVPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIA 121
            L  ILGANNLP NT+R   V P+QV++VP  C CSNGTG+SN+   Y IKK D L  +A
Sbjct: 63  NLRSILGANNLPLNTSRDQRVNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVA 122

Query: 122 TTVFAGLVKYPQIQVANEIPDANNITAGDTIWIPLPCSCDAVAGSSVVHYAHLVQDGSSV 181
           T +F GLV Y +I   N+IPD N I  G   WIPLPCSCD + G  VVHYAH+V+ GSS+
Sbjct: 123 TEIFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSL 182

Query: 182 ESIAQEYGSTQQILLSLNGISDPKLLQARQLLDVPLQACSSSVKNDSPDYPLLVPNATYV 241
             IA ++G+    L  LNGI     L A + LDVPL+ACSSSV+ DS D PLL+ N +YV
Sbjct: 183 GEIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYV 242

Query: 242 YTAKECVKCKCDSSNNFRLQCEPSQHKPINDWSVCPSMECSKNVLIGNTTSTDSCNR-TI 300
           +TA  CVKC CD+  N+ L C+ S     ++W  CP        L+       SC +   
Sbjct: 243 FTANNCVKCTCDALKNWTLSCQSSSEIKPSNWQTCPPFSQCDGALLN-----ASCRQPRD 297

Query: 301 CDYAGYSNSKIST 313
           C YAGYSN  I T
Sbjct: 298 CVYAGYSNQTIFT 310


>AT1G21880.2 | Symbols: LYM1 | lysm domain GPI-anchored protein 1
           precursor | chr1:7680689-7682526 FORWARD LENGTH=416
          Length = 416

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 20/312 (6%)

Query: 15  LVAVLGLLAEAQIEAKFKCISENAPCHALADYSHPNGTTLRRIQTLFTVKYLPDILGANN 74
           L+    L   A  ++  +  S N  C+AL  Y+      +  + +LF V  +  IL AN 
Sbjct: 15  LILASSLTFTATAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANA 73

Query: 75  L----PANTTRVAPDQV-IKVPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLV 129
           +    P     + P ++ +K+P  C C +G   S     YK +  D L  IA +V+ GLV
Sbjct: 74  IDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVST-HYKTRPSDNLGSIADSVYGGLV 132

Query: 130 KYPQIQVANEIPDANNITAGDTIWIPLPCSCDAVAGSSV--VHYAHLVQDGSSVESIAQE 187
              QIQ AN + D + +  G ++ IPLPC+C     +S+  V+ +++V++  ++  IA+ 
Sbjct: 133 SAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARR 192

Query: 188 YGSTQQILLSLNGISDPKLLQARQLLDVPLQACSSSVKNDSPDYPLLVPNATYVYTAKEC 247
           Y +T   L+++N +  P  + +  +L VPL AC+S     + D+ L+VPN +Y   A  C
Sbjct: 193 YSTTITDLMNVNAMGAPD-VSSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHC 251

Query: 248 VKCKCDSSNNFRLQCEPSQHKPINDWSVCPSMEC-SKNVLIGNTT---STDSCNRTICDY 303
           V+C C +  +  L CEP+          C SM+C + N+++GN T   ++  CN T CDY
Sbjct: 252 VQCSC-ALGSRNLYCEPASLA-----VSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDY 305

Query: 304 AGYSNSKISTIL 315
            G +N  I T+L
Sbjct: 306 NGIANGTILTML 317


>AT1G21880.1 | Symbols: LYM1 | lysm domain GPI-anchored protein 1
           precursor | chr1:7680689-7682048 FORWARD LENGTH=316
          Length = 316

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 20/291 (6%)

Query: 35  SENAPCHALADYSHPNGTTLRRIQTLFTVKYLPDILGANNL----PANTTRVAPDQV-IK 89
           S N  C+AL  Y+      +  + +LF V  +  IL AN +    P     + P ++ +K
Sbjct: 35  SSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SILLANAIDISYPDVENHILPSKLFLK 93

Query: 90  VPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAG 149
           +P  C C +G   S     YK +  D L  IA +V+ GLV   QIQ AN + D + +  G
Sbjct: 94  IPITCSCVDGIRKSVST-HYKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDVG 152

Query: 150 DTIWIPLPCSCDAVAGSSV--VHYAHLVQDGSSVESIAQEYGSTQQILLSLNGISDPKLL 207
            ++ IPLPC+C     +S+  V+ +++V++  ++  IA+ Y +T   L+++N +  P  +
Sbjct: 153 TSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLVGIARRYSTTITDLMNVNAMGAPD-V 211

Query: 208 QARQLLDVPLQACSSSVKNDSPDYPLLVPNATYVYTAKECVKCKCDSSNNFRLQCEPSQH 267
            +  +L VPL AC+S     + D+ L+VPN +Y   A  CV+C C +  +  L CEP+  
Sbjct: 212 SSGDILAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSC-ALGSRNLYCEPASL 270

Query: 268 KPINDWSVCPSMEC-SKNVLIGNTT---STDSCNRTICDYAGYSNSKISTI 314
                   C SM+C + N+++GN T   ++  CN T CDY G +N  I T+
Sbjct: 271 A-----VSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTM 316


>AT1G77630.1 | Symbols:  | Peptidoglycan-binding LysM
           domain-containing protein | chr1:29173726-29175387
           FORWARD LENGTH=423
          Length = 423

 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 20/314 (6%)

Query: 14  MLVAVLGLLAEAQIEAKFKCISENAPCHALADYSHPNGTTLRRIQTLFTVKYLPDILGAN 73
            L+    L + A  ++  +  S    C++L  Y+      +  + +LF V  +  +L  +
Sbjct: 11  FLILASSLASMATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPVSMLLSNS 70

Query: 74  ---NLPANTTRVAPDQV-IKVPFPCRCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLV 129
              + P     V P ++ +K+P  C C +G   S     YK +  DTL  IA +V+ GLV
Sbjct: 71  IDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLST-HYKTRTSDTLGSIADSVYGGLV 129

Query: 130 KYPQIQVANEIPDANNITAGDTIWIPLPCSCDAVAGSSV--VHYAHLVQDGSSVESIAQE 187
              QIQVAN   D + +  G  + IPLPC+C      S+  ++ +++V+   ++  IA+ 
Sbjct: 130 SPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTMAGIAKR 189

Query: 188 YGSTQQILLSLNGISDPKLLQARQLLDVPLQACSSSVKNDSPDYPLLVPNATYVYTAKEC 247
           + ++   L ++N +  P  +    +L VPL ACSS+    + DY L++PN +Y  TA  C
Sbjct: 190 FSTSVTDLTNVNAMGAPD-INPGDILAVPLLACSSNFPKYATDYGLIIPNGSYALTAGHC 248

Query: 248 VKCKCDSSNNFRLQCEPSQHKPINDWSV-CPSMEC-SKNVLIGNTTSTDS---CNRTICD 302
           V+C C   +   + CEP+        SV C SM C + N ++GN TS  S   C  T C 
Sbjct: 249 VQCSCVLGSR-SMYCEPAS------ISVSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCS 301

Query: 303 YAGYSNSKISTILA 316
           Y G+++  I T L+
Sbjct: 302 YNGFASGTILTTLS 315


>AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | chitin elicitor receptor
           kinase 1 | chr3:7615543-7618530 REVERSE LENGTH=617
          Length = 617

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 11/167 (6%)

Query: 42  ALADYSHPNGTTLRRIQTLFTVKYLP-------DILGANNLPANTTRVAPDQVIKVPFPC 94
           ALA Y   NGTTL  I         P        IL  N+   +  R+     + VPFPC
Sbjct: 32  ALASYYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSRVLVPFPC 91

Query: 95  RCSNGTGLSNKVPRYKIKKGDTLYDIATTVFAGLVKYPQIQVANEIPDANNITAGDTIWI 154
            C  G  L +    Y +++ DT   +A + +A L     +Q  N  P A NI    T+ +
Sbjct: 92  ECQPGDFLGHNFS-YSVRQEDTYERVAISNYANLTTMESLQARNPFP-ATNIPLSATLNV 149

Query: 155 PLPCSC--DAVAGSSVVHYAHLVQDGSSVESIAQEYGSTQQILLSLN 199
            + CSC  ++V+    +   + ++   S+ SIA+  G +  IL   N
Sbjct: 150 LVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSADILQRYN 196