Miyakogusa Predicted Gene

Lj4g3v0189920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189920.1 tr|G8A1V5|G8A1V5_MEDTR MMP37-like protein
OS=Medicago truncatula GN=MTR_126s0014 PE=4 SV=1,80.97,0,seg,NULL;
Mmp37,Mitochondrial matrix Mmp37; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mitochondrial ,CUFF.46634.1
         (331 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47630.2 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mitochondr...   409   e-114
AT3G47630.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   361   e-100

>AT3G47630.2 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mitochondrial
           matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits
           to 34131 proteins in 2444 species: Archae - 798;
           Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
           531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
           BLink). | chr3:17563254-17565162 REVERSE LENGTH=332
          Length = 332

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/320 (60%), Positives = 224/320 (70%)

Query: 10  SFLQVLPPVQFACVYGSSLHPTNQDKTSMVDYILGVSDPVQWHSENLKLNKHHYASWMVH 69
           SFL VLPPV F CVYGS+LHP NQDK+ MVDYILGVSDP++WHS NLK+N  HYASWMVH
Sbjct: 11  SFLSVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPIKWHSANLKMNSDHYASWMVH 70

Query: 70  LGGERLITQVADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKFYLCGRLQKP 129
           LGG RLIT VADK+GVGVHFNPFV WN +  KYGVVRM DL+QD+L W++FYL GRLQKP
Sbjct: 71  LGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWKRFYLSGRLQKP 130

Query: 130 VHVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDVRMLFAEDKN 189
           VH++VDNLDI   NSVN            PS+FT  DLYAK+CSLSY+GD+RM FAED N
Sbjct: 131 VHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDLYAKICSLSYMGDLRMFFAEDTN 190

Query: 190 KVKNIVSGQFDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQDCDXXXXXXXXXXXXX 249
           KV  IV GQFDLF S+YKPFLEE E K LLR SS      ++ QD               
Sbjct: 191 KVNKIVKGQFDLFQSMYKPFLEECETKNLLRFSSAEASHTKLVQDSSLSATRSLVSSLPA 250

Query: 250 XXXXQMSMKQEQKMKLSETGRIVHDTIISSREEAANCXXXXXXXXXMVSSARQAISGLLA 309
               QM     +K  +SETGR++ +  ISSREEAA C         MVSS RQA+SG LA
Sbjct: 251 SVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCMEKVMRRRVMVSSGRQAVSGFLA 310

Query: 310 AGGVNATRYLAKKVSKAWKS 329
           AG +NAT YL++K+ KAW S
Sbjct: 311 AGAINATMYLSQKMRKAWNS 330


>AT3G47630.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           endomembrane system; EXPRESSED IN: 21 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: Mitochondrial matrix Mmp37
           (InterPro:IPR015222); Has 325 Blast hits to 325 proteins
           in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109;
           Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes
           - 33 (source: NCBI BLink). | chr3:17563254-17565031
           REVERSE LENGTH=320
          Length = 320

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/295 (58%), Positives = 203/295 (68%)

Query: 35  KTSMVDYILGVSDPVQWHSENLKLNKHHYASWMVHLGGERLITQVADKIGVGVHFNPFVT 94
           ++ MVDYILGVSDP++WHS NLK+N  HYASWMVHLGG RLIT VADK+GVGVHFNPFV 
Sbjct: 24  QSKMVDYILGVSDPIKWHSANLKMNSDHYASWMVHLGGARLITNVADKVGVGVHFNPFVN 83

Query: 95  WNGKMFKYGVVRMDDLLQDVLYWEKFYLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXX 154
           WN +  KYGVVRM DL+QD+L W++FYL GRLQKPVH++VDNLDI   NSVN        
Sbjct: 84  WNDRKLKYGVVRMHDLVQDILDWKRFYLSGRLQKPVHMLVDNLDIEDVNSVNKRAAISAA 143

Query: 155 XXXXPSEFTTADLYAKVCSLSYLGDVRMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYE 214
               PS+FT  DLYAK+CSLSY+GD+RM FAED NKV  IV GQFDLF S+YKPFLEE E
Sbjct: 144 LLLLPSKFTEEDLYAKICSLSYMGDLRMFFAEDTNKVNKIVKGQFDLFQSMYKPFLEECE 203

Query: 215 AKKLLRLSSTANRPIQVSQDCDXXXXXXXXXXXXXXXXXQMSMKQEQKMKLSETGRIVHD 274
            K LLR SS      ++ QD                   QM     +K  +SETGR++ +
Sbjct: 204 TKNLLRFSSAEASHTKLVQDSSLSATRSLVSSLPASVRSQMGKSLGEKKFVSETGRVMGE 263

Query: 275 TIISSREEAANCXXXXXXXXXMVSSARQAISGLLAAGGVNATRYLAKKVSKAWKS 329
             ISSREEAA C         MVSS RQA+SG LAAG +NAT YL++K+ KAW S
Sbjct: 264 VCISSREEAAKCMEKVMRRRVMVSSGRQAVSGFLAAGAINATMYLSQKMRKAWNS 318