Miyakogusa Predicted Gene

Lj4g3v0189820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189820.1 tr|I3SKG4|I3SKG4_MEDTR Peptidyl-prolyl cis-trans
isomerase OS=Medicago truncatula PE=2 SV=1,70.56,0,seg,NULL;
PEPTIDYLPROLYL ISOMERASE,NULL; PEPTIDYL-PROLYL CIS-TRANS
ISOMERASE,Peptidyl-prolyl cis-tra,CUFF.46622.1
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45680.1 | Symbols: ATFKBP13, FKBP13 | FK506-binding protein ...   174   4e-44
AT4G39710.1 | Symbols: FKBP16-2 | FK506-binding protein 16-2 | c...   104   4e-23
AT4G39710.2 | Symbols: FKBP16-2 | FK506-binding protein 16-2 | c...    80   7e-16
AT5G05420.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    59   2e-09
AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 ...    58   5e-09
AT5G48580.1 | Symbols: FKBP15-2 | FK506- and rapamycin-binding p...    58   5e-09
AT2G43560.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    57   1e-08
AT3G10060.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    55   3e-08
AT4G25340.1 | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN ...    55   4e-08
AT3G60370.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    49   2e-06

>AT5G45680.1 | Symbols: ATFKBP13, FKBP13 | FK506-binding protein 13
           | chr5:18530894-18532128 FORWARD LENGTH=208
          Length = 208

 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 88/163 (53%), Positives = 105/163 (64%), Gaps = 6/163 (3%)

Query: 49  AQKESQFKRRDAIGLALSVGILQAFFPPKPASAAVEAPPCELTAAPSGLAFCDKLVGTGP 108
           AQ  S  +R   IG   S+G+L         SA  E   CE + +PSGLAFCDK+VG GP
Sbjct: 51  AQLSSCGRREAIIGFGFSIGLLDN------VSALAETTSCEFSVSPSGLAFCDKVVGYGP 104

Query: 109 QAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLA 168
           +AVKGQLIKAHYVG+LENGK+FDSSYNRG+PLTFR+GVGEV              PPML 
Sbjct: 105 EAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 164

Query: 169 GGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDVEFVSK 211
           GGKRTL++PPEL              +IPP SVLLFD+E++ K
Sbjct: 165 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 207


>AT4G39710.1 | Symbols: FKBP16-2 | FK506-binding protein 16-2 |
           chr4:18427249-18428325 REVERSE LENGTH=217
          Length = 217

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 70/129 (54%)

Query: 81  AAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPL 140
           A V  P CE + A SGL FCD  VG G +A +G L+  HY  R  +G +FDSSY R +PL
Sbjct: 80  ATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPL 139

Query: 141 TFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELXXXXXXXXXXXXXXVIPPDS 200
           T R+GVG+V              PPM  GGKR L++PP+L               IP ++
Sbjct: 140 TMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFSGDCNIPGNA 199

Query: 201 VLLFDVEFV 209
            LL+D+ FV
Sbjct: 200 TLLYDINFV 208


>AT4G39710.2 | Symbols: FKBP16-2 | FK506-binding protein 16-2 |
           chr4:18427447-18428325 REVERSE LENGTH=177
          Length = 177

 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 49/88 (55%)

Query: 81  AAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPL 140
           A V  P CE + A SGL FCD  VG G +A +G L+  HY  R  +G +FDSSY R +PL
Sbjct: 80  ATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPL 139

Query: 141 TFRVGVGEVXXXXXXXXXXXXXXPPMLA 168
           T R+GVG+V              PPM A
Sbjct: 140 TMRIGVGKVIRGLDQGILGGEGVPPMRA 167


>AT5G05420.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr5:1604040-1604823 REVERSE
           LENGTH=143
          Length = 143

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 106 TGPQAVKGQLIKAHYVGRLE-NGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXP 164
            G +A  G+ +  HY G+L+ NGKIFDS+  + +   FR+  G+V               
Sbjct: 49  NGKKAEPGKRVSVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKGLDVGLNG----- 102

Query: 165 PMLAGGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDVEFVS 210
            ML GGKR L +PPE+               IPPDS L+FDVE ++
Sbjct: 103 -MLVGGKRKLTIPPEMGYGAEGAGS------IPPDSWLVFDVELLN 141


>AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 |
           chr3:9182691-9184463 FORWARD LENGTH=153
          Length = 153

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 109 QAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLA 168
           QA KG  IK HY G+L +G +FDSS+ RG P+ F +G G+V                   
Sbjct: 48  QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGA------CV 101

Query: 169 GGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDVEFVS 210
           G KR LK+P +L               IP  + L+FD E V+
Sbjct: 102 GEKRKLKIPSKLGYGDNGSPPK-----IPGGATLIFDTELVA 138


>AT5G48580.1 | Symbols: FKBP15-2 | FK506- and rapamycin-binding
           protein 15 kD-2 | chr5:19696156-19697304 REVERSE
           LENGTH=163
          Length = 163

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 109 QAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLA 168
           QA KG  IK HY G+L +G +FDSS+ RG P  F++G G+V                   
Sbjct: 48  QAHKGDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CV 101

Query: 169 GGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDVEFVS 210
           G KR LK+P +L               IP  + L+FD E ++
Sbjct: 102 GEKRKLKIPAKL-----GYGEQGSPPTIPGGATLIFDTELIA 138


>AT2G43560.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr2:18073995-18075385
           REVERSE LENGTH=223
          Length = 223

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 26/171 (15%)

Query: 57  RRDAIGL------ALSVGILQAF---FPPKPASAAVEAPPCE-------LTAAPSGLAFC 100
           RR+A+ L       LS+  L A+    PP+      EA  CE       +    SGL + 
Sbjct: 53  RREAMLLVLGVSGGLSMSSLAAYAAGLPPEDKPRLCEAE-CEKELENVPMVTTESGLQYK 111

Query: 101 DKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXXXXXXXXXX 160
           D  VG GP    G  + A+YV  + +G+IFDSS  +G P  FRVG G+V           
Sbjct: 112 DIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILS- 170

Query: 161 XXXPPMLAGGKRTLKLPPELXXXXXXXXXXXXXXVIPPDSVLLFDV--EFV 209
                M AGGKR L +P  L              V  P+S ++FDV  EF+
Sbjct: 171 -----MKAGGKRRLYIPGPLAFPKGLVSAPGRPRVA-PNSPVIFDVSLEFI 215


>AT3G10060.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr3:3102291-3103801 FORWARD
           LENGTH=230
          Length = 230

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 15/151 (9%)

Query: 65  LSVGILQAFFPPKPASAAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRL 124
           LS G  +A    + A  A + P  + T  P+GL + D  VG G +AVKG  +  HYV + 
Sbjct: 75  LSTGSAEAVSTSRRALRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKW 134

Query: 125 ENGKIFDSSYN-----RGQPLTFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPE 179
           + G  F +S        G P  F VG  E                 M  GG+R + +PPE
Sbjct: 135 K-GITFMTSRQGLGVGGGTPYGFDVGQSERGNVLKGLDLGVEG---MRVGGQRLVIVPPE 190

Query: 180 LXXXXXXXXXXXXXXVIPPDSVLLFDVEFVS 210
           L               IPP++ +  D+E +S
Sbjct: 191 LAYGKKGVQE------IPPNATIELDIELLS 215


>AT4G25340.1 | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN 53
           | chr4:12959657-12962632 REVERSE LENGTH=477
          Length = 477

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)

Query: 84  EAPPCELTAAPSGLAFCDKLVG--TGPQAVKGQLIKAHYVGRLE-NGKIFDSSYNRGQPL 140
           ++   ++   P+GL   +  +G   G +A  G+ +   Y+G+L+ NGKIFDS+  +  P 
Sbjct: 358 DSKSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGK-SPF 416

Query: 141 TFRVGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELXXXXXXXXXXXXXXVIPPDS 200
            FR+G+G V                M  G KR L +PP +               IPP+S
Sbjct: 417 KFRLGIGSVIKGWDVGVNG------MRVGDKRKLTIPPSMGYGVKGAGGQ-----IPPNS 465

Query: 201 VLLFDVEFVS 210
            L FDVE ++
Sbjct: 466 WLTFDVELIN 475


>AT3G60370.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr3:22315000-22316533
           REVERSE LENGTH=242
          Length = 242

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 93  APSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVXXX 152
           A SGL + D  VG G     GQ +  HY+G  E+G+  DS+Y +G P   R+G   +   
Sbjct: 118 ADSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPG 177

Query: 153 XXXXXXXXXXXPPMLAGGKRTLKLPPEL 180
                        M  GG+R + +PPEL
Sbjct: 178 FEMGIRD------MKPGGRRRIIIPPEL 199