Miyakogusa Predicted Gene

Lj4g3v0177480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0177480.1 Non Chatacterized Hit- tr|J3LVA3|J3LVA3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB04G1,31,5e-19,Bet
v1-like,NULL; START,Lipid-binding START; SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER
,NODE_55881_length_1221_cov_54.047501.path2.1
         (250 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13062.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   304   4e-83
AT3G13062.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   303   5e-83
AT3G13062.3 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   303   6e-83
AT1G55960.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   302   1e-82
AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and li...   102   2e-22
AT5G54170.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...    99   2e-21
AT4G14500.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...    98   5e-21
AT3G23080.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid...    87   9e-18
AT3G23080.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...    87   1e-17

>AT3G13062.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:4184777-4187268
           FORWARD LENGTH=440
          Length = 440

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 147/255 (57%), Positives = 186/255 (72%), Gaps = 6/255 (2%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLLKPREYVLTWKLWEGR 60
           +LR+FYMDN+YRKQWDKTVVEH QLQVD + G E+GRT+KKFPLL PREYVL WKLWEG+
Sbjct: 147 VLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLLTPREYVLAWKLWEGK 206

Query: 61  DNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQNACEITMFHQEVAGLNMEMA 120
           D F YC++KEC+H + P+ RKYVRV ++RSGWRIR++PG+NACEI M HQE AGLN+EMA
Sbjct: 207 DKF-YCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGRNACEIHMVHQEDAGLNVEMA 265

Query: 121 KLAFSKGIWSYVCKMDNALRSYSAISGQLXXXXXXXXNLLQKVPAWLDSSTRNISPAHRT 180
           KLAFS+GIWSYVCKM+NALR Y A S +         +L++K+P+ L+S T +I+ +  T
Sbjct: 266 KLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKIPSELESQTDDITNSSGT 325

Query: 181 TIHDHVTNESEAR-VISRRPSRKXXXXXXXXXXXXV----CLSRGHSSLGAKVAMAYILT 235
           T     T E   R  + R+PS+K            V    CLSRGHS+LGAKVA+AY L+
Sbjct: 326 TTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICLSRGHSALGAKVALAYFLS 385

Query: 236 KLSKHGAASNQRKQS 250
           K+ K GA  +Q  Q+
Sbjct: 386 KMRKRGAQLSQTSQN 400


>AT3G13062.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:4184777-4186795
           FORWARD LENGTH=403
          Length = 403

 Score =  303 bits (777), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 147/255 (57%), Positives = 186/255 (72%), Gaps = 6/255 (2%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLLKPREYVLTWKLWEGR 60
           +LR+FYMDN+YRKQWDKTVVEH QLQVD + G E+GRT+KKFPLL PREYVL WKLWEG+
Sbjct: 147 VLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLLTPREYVLAWKLWEGK 206

Query: 61  DNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQNACEITMFHQEVAGLNMEMA 120
           D F YC++KEC+H + P+ RKYVRV ++RSGWRIR++PG+NACEI M HQE AGLN+EMA
Sbjct: 207 DKF-YCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGRNACEIHMVHQEDAGLNVEMA 265

Query: 121 KLAFSKGIWSYVCKMDNALRSYSAISGQLXXXXXXXXNLLQKVPAWLDSSTRNISPAHRT 180
           KLAFS+GIWSYVCKM+NALR Y A S +         +L++K+P+ L+S T +I+ +  T
Sbjct: 266 KLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKIPSELESQTDDITNSSGT 325

Query: 181 TIHDHVTNESEAR-VISRRPSRKXXXXXXXXXXXXV----CLSRGHSSLGAKVAMAYILT 235
           T     T E   R  + R+PS+K            V    CLSRGHS+LGAKVA+AY L+
Sbjct: 326 TTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICLSRGHSALGAKVALAYFLS 385

Query: 236 KLSKHGAASNQRKQS 250
           K+ K GA  +Q  Q+
Sbjct: 386 KMRKRGAQLSQTSQN 400


>AT3G13062.3 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:4184777-4186795
           FORWARD LENGTH=411
          Length = 411

 Score =  303 bits (777), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 147/255 (57%), Positives = 186/255 (72%), Gaps = 6/255 (2%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLLKPREYVLTWKLWEGR 60
           +LR+FYMDN+YRKQWDKTVVEH QLQVD + G E+GRT+KKFPLL PREYVL WKLWEG+
Sbjct: 155 VLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLLTPREYVLAWKLWEGK 214

Query: 61  DNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQNACEITMFHQEVAGLNMEMA 120
           D F YC++KEC+H + P+ RKYVRV ++RSGWRIR++PG+NACEI M HQE AGLN+EMA
Sbjct: 215 DKF-YCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGRNACEIHMVHQEDAGLNVEMA 273

Query: 121 KLAFSKGIWSYVCKMDNALRSYSAISGQLXXXXXXXXNLLQKVPAWLDSSTRNISPAHRT 180
           KLAFS+GIWSYVCKM+NALR Y A S +         +L++K+P+ L+S T +I+ +  T
Sbjct: 274 KLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKIPSELESQTDDITNSSGT 333

Query: 181 TIHDHVTNESEAR-VISRRPSRKXXXXXXXXXXXXV----CLSRGHSSLGAKVAMAYILT 235
           T     T E   R  + R+PS+K            V    CLSRGHS+LGAKVA+AY L+
Sbjct: 334 TTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICLSRGHSALGAKVALAYFLS 393

Query: 236 KLSKHGAASNQRKQS 250
           K+ K GA  +Q  Q+
Sbjct: 394 KMRKRGAQLSQTSQN 408


>AT1G55960.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr1:20927962-20929825
           REVERSE LENGTH=403
          Length = 403

 Score =  302 bits (774), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 141/254 (55%), Positives = 184/254 (72%), Gaps = 5/254 (1%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLLKPREYVLTWKLWEGR 60
           ++R+FYMDNDYRK WDKTVVEH QLQVD + G E+GRT+KKFPLL  REYVL W+LW+G+
Sbjct: 148 IVRDFYMDNDYRKLWDKTVVEHEQLQVDSNTGIEIGRTIKKFPLLTSREYVLAWRLWQGK 207

Query: 61  DNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQNACEITMFHQEVAGLNMEMA 120
           +  FYC+ KEC+H + P+ RKYVRV ++RSGWRIRQ+PG+NACEI MFHQE AGLN+EMA
Sbjct: 208 EKKFYCFTKECDHNMVPQQRKYVRVSYFRSGWRIRQVPGRNACEIKMFHQENAGLNVEMA 267

Query: 121 KLAFSKGIWSYVCKMDNALRSYSAISGQLXXXXXXXXNLLQKVPAWLDSSTRNISPAHRT 180
           KLAFSKGIWSYVCKM+NAL  Y A S +          L+++VP+ L++ T N++ +  T
Sbjct: 268 KLAFSKGIWSYVCKMENALCKYIATSHRTQGPILSAVTLMKEVPSELETGTDNVTGSMET 327

Query: 181 T----IHDHVTNESEARVISRRPSRKXXXXXXXXXXXXVCLSRGHSSLGAKVAMAYILTK 236
           +    +  HV    + + + R+PS K            +CLSRG S+LGAKVA+AY+LTK
Sbjct: 328 SSGEGVLSHVVAAKQKKKM-RKPSTKLIAKGLVLVGGAICLSRGPSALGAKVALAYLLTK 386

Query: 237 LSKHGAASNQRKQS 250
           L+K G + NQ  Q+
Sbjct: 387 LNKRGTSLNQTTQT 400


>AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr1:24046887-24048537
           REVERSE LENGTH=385
          Length = 385

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 8/149 (5%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
           M+R+F+ D+++R +WD  ++  + L+  +  GT V + V+KFP     REY++  ++W+ 
Sbjct: 150 MVRDFFWDDEFRSKWDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIWDA 209

Query: 60  RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQ------NACEITMFHQEVA 113
               FYC  K  ++P  PR  K  RV+ Y S W IR +  +       +CE+ +FH E  
Sbjct: 210 -GRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHEDM 268

Query: 114 GLNMEMAKLAFSKGIWSYVCKMDNALRSY 142
           G+  E+AKL   +G+W  V K++  LR+Y
Sbjct: 269 GIPWEIAKLGVRQGMWGAVKKIEPGLRAY 297


>AT5G54170.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr5:21985056-21987039
           REVERSE LENGTH=449
          Length = 449

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
           MLR+F+ D+++R  WD  +     ++   S GT + R ++KFP     REYV+  ++W  
Sbjct: 190 MLRDFFWDDEFRPTWDTMLSNSTTVEECPSTGTMIVRWIRKFPFFCSDREYVIGRRIWNC 249

Query: 60  RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQ------NACEITMFHQEVA 113
             N +YC  K    P  P   K  RV+ + S W IR +  +      +ACE+ +FH E  
Sbjct: 250 -GNSYYCVTKGVSVPSIPPNNKQKRVDLFYSSWCIRPVESRRDDGVTSACEVLLFHHEDM 308

Query: 114 GLNMEMAKLAFSKGIWSYVCKMDNALRSY 142
           G+  E+AKL   +G+W  V KM+  LR+Y
Sbjct: 309 GIPREIAKLGVKRGMWGAVKKMEPGLRAY 337


>AT4G14500.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr4:8334391-8337022
           FORWARD LENGTH=433
          Length = 433

 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 8/151 (5%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
           ++R+F+ D+++R +WD  +     L+ D   GT + +  KKFP     REY++  ++WE 
Sbjct: 198 IVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRKKFPFFCSDREYIIGRRIWES 257

Query: 60  RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPG------QNACEITMFHQEVA 113
              + YC  K   +P  P+  K  RVE Y S W IR +        Q ACE+++ H E  
Sbjct: 258 GKKY-YCVTKGVPYPALPKRDKPRRVELYFSSWVIRAVESRKGDGQQTACEVSLVHYEDM 316

Query: 114 GLNMEMAKLAFSKGIWSYVCKMDNALRSYSA 144
           G+  ++AKL    G+W  V K+++ LR+Y +
Sbjct: 317 GIPKDVAKLGVRHGMWGAVKKLNSGLRAYQS 347


>AT3G23080.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:8207612-8209088
           REVERSE LENGTH=388
          Length = 388

 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 10/152 (6%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWE- 58
           ++R+F+ D+++R +WD  +     L+ D   GT +   +KKFP     REY++  ++WE 
Sbjct: 151 IVRDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWES 210

Query: 59  GRDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRI-----RQIPGQ-NACEITMFHQEV 112
           GR   +Y   K   +    +  K  RVE Y S W I     R+  GQ  ACE+++ H E 
Sbjct: 211 GRK--YYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYED 268

Query: 113 AGLNMEMAKLAFSKGIWSYVCKMDNALRSYSA 144
            G+  ++AKL    G+W  V K+++ LR+Y +
Sbjct: 269 MGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQS 300


>AT3G23080.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:8207612-8209181
           REVERSE LENGTH=419
          Length = 419

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 10/152 (6%)

Query: 1   MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWE- 58
           ++R+F+ D+++R +WD  +     L+ D   GT +   +KKFP     REY++  ++WE 
Sbjct: 182 IVRDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWES 241

Query: 59  GRDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRI-----RQIPGQ-NACEITMFHQEV 112
           GR   +Y   K   +    +  K  RVE Y S W I     R+  GQ  ACE+++ H E 
Sbjct: 242 GRK--YYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYED 299

Query: 113 AGLNMEMAKLAFSKGIWSYVCKMDNALRSYSA 144
            G+  ++AKL    G+W  V K+++ LR+Y +
Sbjct: 300 MGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQS 331