Miyakogusa Predicted Gene
- Lj4g3v0166400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0166400.1 Non Chatacterized Hit- tr|D7TAG1|D7TAG1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.95,0,coiled-coil,NULL; Remorin_C,Remorin, C-terminal; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.46592.1
(508 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02170.2 | Symbols: | Remorin family protein | chr2:556595-5... 429 e-120
AT2G02170.1 | Symbols: | Remorin family protein | chr2:556595-5... 429 e-120
AT1G30320.1 | Symbols: | Remorin family protein | chr1:10680348... 185 8e-47
AT1G67590.1 | Symbols: | Remorin family protein | chr1:25333137... 99 6e-21
AT1G67590.2 | Symbols: | Remorin family protein | chr1:25333255... 86 4e-17
AT1G53860.1 | Symbols: | Remorin family protein | chr1:20107165... 72 8e-13
>AT2G02170.2 | Symbols: | Remorin family protein |
chr2:556595-558610 REVERSE LENGTH=486
Length = 486
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 275/534 (51%), Positives = 318/534 (59%), Gaps = 74/534 (13%)
Query: 1 MDYERIQKPQ---GNGGFSPGKLRSMLL-GVXXXXXXXXXVDSTFTPGS-QNPDMDESGG 55
MDYERI K Q GGFSPGKLRSMLL GV T GS Q D
Sbjct: 1 MDYERIGKTQVTSSGGGFSPGKLRSMLLLGVDRKKNEEEESTPTMRSGSNQIDDPRVYVA 60
Query: 56 SSSDHCKDVDVVSVLPDYSTS-TARTWSIETAGGDRIGKVNAGITSKNRILEDPSLDYDS 114
S D CKDVDVVS + D STS AR+ S+ L++ S DYD+
Sbjct: 61 SGLDDCKDVDVVSEITDCSTSGIARSISLG--------------------LQEYS-DYDN 99
Query: 115 GQDNMSMS-SSVFEFQKAER--APPRVPAGPFSKPAPSKWDDAQKWIASPTSNRPKTAQS 171
+ S+S SSVFEFQK E+ R+P FSKPAPSKWDDAQKWIASPT+NRPKT Q
Sbjct: 100 VNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPTANRPKTGQV 159
Query: 172 QGQGGHGGPRKVGSLGYGSRQSSMKVVVEVPDQREIALDEPDTKQMDTDQTKMDSEGHKF 231
Q G GP S G RQSSMK+V EV + R ++EPDTK++D Q K D G+KF
Sbjct: 160 QVPGSKKGP----SFG---RQSSMKIV-EVAEHR--VVEEPDTKRIDVSQVKKDM-GNKF 208
Query: 232 ASYEVDPYAVANSYV-----------------SLSQHNSSVAIQSATTFVPPPSTARSVS 274
S+EVD Y +SYV +LS+H+SSVA T F PPSTARSVS
Sbjct: 209 GSWEVDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVA----TAFAQPPSTARSVS 264
Query: 275 MRDMGTEMTPIASQEPSRTGTPVRSTTPMRXXXXXXXXXXXXXXXXXXXXDPHIDNLNLN 334
MRDMGTEMTPIASQEPSR GTP+R+TTP+R ++
Sbjct: 265 MRDMGTEMTPIASQEPSRNGTPIRATTPIRSPISSEPSSPGRQASASP----------MS 314
Query: 335 KSELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKAKTADQPAKSVIX 394
ELSEKELQMKTRREIMVLGTQLGK NIAAWASKE+EDKDASTSLK K + Q +KSV
Sbjct: 315 NKELSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSE 374
Query: 395 XXXXXXXXXXXXKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHDKLMN 454
K+MARFRREEMKIQAWENHQKAK+EA+M+K EV+VERI+ ++ D+LM
Sbjct: 375 ARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDRLMK 434
Query: 455 KLASXXXXXXXXXXXXXXXXXXXXXKTEEQAEYIRRTGHVPSSYLTFSWCSWCS 508
KLA+ KTE+QAE IRRTG VPS L FS S+CS
Sbjct: 435 KLATIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPS--LLFSCFSFCS 486
>AT2G02170.1 | Symbols: | Remorin family protein |
chr2:556595-558610 REVERSE LENGTH=486
Length = 486
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 275/534 (51%), Positives = 318/534 (59%), Gaps = 74/534 (13%)
Query: 1 MDYERIQKPQ---GNGGFSPGKLRSMLL-GVXXXXXXXXXVDSTFTPGS-QNPDMDESGG 55
MDYERI K Q GGFSPGKLRSMLL GV T GS Q D
Sbjct: 1 MDYERIGKTQVTSSGGGFSPGKLRSMLLLGVDRKKNEEEESTPTMRSGSNQIDDPRVYVA 60
Query: 56 SSSDHCKDVDVVSVLPDYSTS-TARTWSIETAGGDRIGKVNAGITSKNRILEDPSLDYDS 114
S D CKDVDVVS + D STS AR+ S+ L++ S DYD+
Sbjct: 61 SGLDDCKDVDVVSEITDCSTSGIARSISLG--------------------LQEYS-DYDN 99
Query: 115 GQDNMSMS-SSVFEFQKAER--APPRVPAGPFSKPAPSKWDDAQKWIASPTSNRPKTAQS 171
+ S+S SSVFEFQK E+ R+P FSKPAPSKWDDAQKWIASPT+NRPKT Q
Sbjct: 100 VNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPTANRPKTGQV 159
Query: 172 QGQGGHGGPRKVGSLGYGSRQSSMKVVVEVPDQREIALDEPDTKQMDTDQTKMDSEGHKF 231
Q G GP S G RQSSMK+V EV + R ++EPDTK++D Q K D G+KF
Sbjct: 160 QVPGSKKGP----SFG---RQSSMKIV-EVAEHR--VVEEPDTKRIDVSQVKKDM-GNKF 208
Query: 232 ASYEVDPYAVANSYV-----------------SLSQHNSSVAIQSATTFVPPPSTARSVS 274
S+EVD Y +SYV +LS+H+SSVA T F PPSTARSVS
Sbjct: 209 GSWEVDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVA----TAFAQPPSTARSVS 264
Query: 275 MRDMGTEMTPIASQEPSRTGTPVRSTTPMRXXXXXXXXXXXXXXXXXXXXDPHIDNLNLN 334
MRDMGTEMTPIASQEPSR GTP+R+TTP+R ++
Sbjct: 265 MRDMGTEMTPIASQEPSRNGTPIRATTPIRSPISSEPSSPGRQASASP----------MS 314
Query: 335 KSELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKAKTADQPAKSVIX 394
ELSEKELQMKTRREIMVLGTQLGK NIAAWASKE+EDKDASTSLK K + Q +KSV
Sbjct: 315 NKELSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSE 374
Query: 395 XXXXXXXXXXXXKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHDKLMN 454
K+MARFRREEMKIQAWENHQKAK+EA+M+K EV+VERI+ ++ D+LM
Sbjct: 375 ARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDRLMK 434
Query: 455 KLASXXXXXXXXXXXXXXXXXXXXXKTEEQAEYIRRTGHVPSSYLTFSWCSWCS 508
KLA+ KTE+QAE IRRTG VPS L FS S+CS
Sbjct: 435 KLATIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPS--LLFSCFSFCS 486
>AT1G30320.1 | Symbols: | Remorin family protein |
chr1:10680348-10682852 FORWARD LENGTH=509
Length = 509
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 252/549 (45%), Gaps = 81/549 (14%)
Query: 1 MDYERIQKPQGNGGFSPGKLRSMLLG----VXXXXXXXXXVDSTFTPGS-QNPDMDESGG 55
MDYERIQK Q SP KLR L+G + S +P Q PD E
Sbjct: 1 MDYERIQKVQ-KSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSK 59
Query: 56 SS---SDHCKDVDV--------VSVLPD----YSTSTARTWSIETAGGD----------- 89
+S S+ D DV V+ LP+ Y T S + G
Sbjct: 60 NSLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCEGVVPRENDQPRLQ 119
Query: 90 --RIGKVNAGITSKNRILEDPSLDYDSGQDNMSMSSSVFEFQKA--ERAPPRVPAGPF-S 144
R G +N R ED +LDYDS + SSS FEF +A ER+ + + S
Sbjct: 120 QFRKGDLNMASPHIMRPQEDENLDYDS-----NASSSSFEFHRARGERSNQNHGSRGYPS 174
Query: 145 KPAPSKWDDAQKWIASPTSNRPKTAQSQGQGGHGGPRKV-GSLGYGSRQSSMKVVVEVPD 203
+ PSKW+DA+KWI S + + GQG R V + GY +S M +
Sbjct: 175 RQMPSKWNDAEKWI---MSRQNMVMRKNGQGNRIPVRIVPDNAGYEHNKSRMDLC----- 226
Query: 204 QREIALDEPDTKQMDTDQ---TKMDSEGHKFASYEVDPYAVANSYVSLSQHNSSVAIQSA 260
+ Q+D + + S H + E +S + S ++ +A S
Sbjct: 227 ---------QSSQVDGFEKFPNVVPSAPHPILTQEYG----GDSLIDQSTQSNDLADSSH 273
Query: 261 TTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRSTTPMRXXXXXXXXXXXXXXXX 320
P+ RSV MRDMGTEMTPI SQEPSR+ TPV +TTP+R
Sbjct: 274 DHTTGGPAI-RSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRGGQ-- 330
Query: 321 XXXXDPHIDNLNLN-KSELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTS 379
P +++ N + ELSE+E + KTRREI+ LG QLGKMNIAAWASKEEE+ +
Sbjct: 331 -----PEESSMSKNTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASKEEEENKKNNG 385
Query: 380 LKAKTADQPAKSVIXXXXXXXXXXXXXKYMARFRREEMKIQAWENHQKAKTEAKMRKIEV 439
A++ K K+ AR++REE++IQAWE+ +KAK EA+MR+IE
Sbjct: 386 ----DAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEA 441
Query: 440 EVERIRSKSHDKLMNKLASXXXXXXXXXXXXXXXXXXXXXKTEEQAEYIRRTGHVPSSYL 499
+VE++++++ K+M K+A K +A+YIR TG +P+S
Sbjct: 442 KVEQMKAEAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGRIPASSY 501
Query: 500 TFSWCSWCS 508
C W S
Sbjct: 502 KIC-CGWFS 509
>AT1G67590.1 | Symbols: | Remorin family protein |
chr1:25333137-25334472 REVERSE LENGTH=347
Length = 347
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Query: 407 KYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHDKLMNKLASXXXXXXXX 466
K+MAR++REE+KIQAWENH+K K E +M+K+EV+ ER+++++ +KL NKLA+
Sbjct: 243 KFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEER 302
Query: 467 XXXXXXXXXXXXXKTEEQAEYIRRTGHVPSSYLTFSW-----CSWC 507
KT E+A+YIRR+GH+PSS+ +FS+ C WC
Sbjct: 303 RANAEAKLNEKAVKTSEKADYIRRSGHLPSSF-SFSFKLPSRC-WC 346
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 123 SSVFEFQKAERAPPRVPAGPFSKPAPSKWDDAQKWIASPTSNRPKTAQSQGQGGHGGPRK 182
S+ FEFQK P KPAPSKWDDAQKW++ R H K
Sbjct: 20 SNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGFARGGGGGGDKSSHHSRSNK 79
Query: 183 VGSLGYGSRQSSMKVVVEVPDQREIALDEPDTKQMDTDQTKMDSEGH-KFASYEVDPYAV 241
R S+ D R IA ++ + EG ++ Y+ + A
Sbjct: 80 -------PRNSN------ADDLRLIA-----------SASQREREGEDQYVEYDDEEMAA 115
Query: 242 ANSYVSLSQHNSSVAIQSATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRSTT 301
V + ++ + + P + RSV +RDMGTEMTPI SQEPSRT TPVR+TT
Sbjct: 116 GRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATT 175
Query: 302 PM 303
P+
Sbjct: 176 PV 177
>AT1G67590.2 | Symbols: | Remorin family protein |
chr1:25333255-25334472 REVERSE LENGTH=308
Length = 308
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 123 SSVFEFQKAERAPPRVPAGPFSKPAPSKWDDAQKWIASPTSNRPKTAQSQGQGGHGGPRK 182
S+ FEFQK P KPAPSKWDDAQKW++ R H K
Sbjct: 20 SNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGFARGGGGGGDKSSHHSRSNK 79
Query: 183 VGSLGYGSRQSSMKVVVEVPDQREIALDEPDTKQMDTDQTKMDSEGH-KFASYEVDPYAV 241
R S+ D R IA ++ + EG ++ Y+ + A
Sbjct: 80 -------PRNSN------ADDLRLIA-----------SASQREREGEDQYVEYDDEEMAA 115
Query: 242 ANSYVSLSQHNSSVAIQSATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRSTT 301
V + ++ + + P + RSV +RDMGTEMTPI SQEPSRT TPVR+TT
Sbjct: 116 GRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATT 175
Query: 302 PM 303
P+
Sbjct: 176 PV 177
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 407 KYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHDKL 452
K+MAR++REE+KIQAWENH+K K E +M+K+EV SK ++
Sbjct: 243 KFMARYKREEVKIQAWENHEKRKAEMEMKKMEVRCGEDESKGRGEV 288
>AT1G53860.1 | Symbols: | Remorin family protein |
chr1:20107165-20109458 REVERSE LENGTH=442
Length = 442
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 273 VSMRDMGTEMTPIASQEPSRTGTPVRSTTPMRXXXXXXXXXXXXXXXXXXXXDPHIDNLN 332
V RDMGTEMTPI S SR TP +S++P R D L
Sbjct: 218 VQHRDMGTEMTPIGSVTTSRCHTPFKSSSPARHNTPSQLSGPLTETKNVIDISEFEDKLR 277
Query: 333 LNKSELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKAKTADQPAKSV 392
L+ S S Q + W S+EEE+++ S SL+ + +
Sbjct: 278 LSGSSTS-----------------QYCYSVTSHWNSREEEEEEISKSLRHFDMESELRRS 320
Query: 393 IXXXXXXX--XXXXXXKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHD 450
+ K+ R++REE KIQAW N + AK EA+ RK+EV+++++RS +
Sbjct: 321 VSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVNLENAKAEAQSRKLEVKIQKMRSNLEE 380
Query: 451 KLMNKL 456
KLM ++
Sbjct: 381 KLMKRM 386