Miyakogusa Predicted Gene

Lj4g3v0166370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0166370.1 Non Chatacterized Hit- tr|I1KIZ8|I1KIZ8_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,49.32,0.0000000000004, ,CUFF.46589.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38280.1 | Symbols: PR5K | PR5-like receptor kinase | chr5:15...    49   1e-06

>AT5G38280.1 | Symbols: PR5K | PR5-like receptor kinase |
           chr5:15293325-15295838 REVERSE LENGTH=665
          Length = 665

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MVPLEIVGGRRI--LDFQASHQSEVYFPHVANKKFKRGITLRPDERMTINDKEKL-RKLT 57
           MV LE++G + I  +++  S+   +YFP    K F++G   R       +++EK+ +KL 
Sbjct: 522 MVVLEMIGAKNIEKVEYSGSNNGSMYFPEWVYKDFEKGEITRIFGDSITDEEEKIAKKLV 581

Query: 58  IIALRCAQKSPNDTP 72
           ++AL C Q +P+D P
Sbjct: 582 LVALWCIQMNPSDRP 596