Miyakogusa Predicted Gene

Lj4g3v0166340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0166340.1 Non Chatacterized Hit- tr|I3SRC8|I3SRC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.66,0,seg,NULL;
FAMILY NOT NAMED,NULL; DUF1084,Domain of unknown function
DUF1084,CUFF.46595.1
         (297 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein...   436   e-123
AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF10...   402   e-112
AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF10...   402   e-112
AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication...   292   2e-79

>AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3
           | chr2:560976-562961 FORWARD LENGTH=303
          Length = 303

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/280 (76%), Positives = 231/280 (82%), Gaps = 3/280 (1%)

Query: 18  LNFTESSSSSNWWRDINNSPLWQDRIFHVLAVLYGIVAAIALVQLVRIQLRVPEYGWTTQ 77
           LN  E+S   NWW D+N SP+WQDRIFHVLAVLYGIV+ +A++QLVRIQLRVPEYGWTTQ
Sbjct: 27  LNLKEAS---NWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQ 83

Query: 78  KVFHFLNXXXXXXXXXXXXXXXXXQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYY 137
           KVFHFLN                 Q +QPEI+QHILLD+PSLAFFTTYALLVLFWAEIYY
Sbjct: 84  KVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYY 143

Query: 138 QARAVSTDGLRPSFYTINAVVYVVQIVLWLILWWKPISVLVILSKMFFAGVSXXXXXXXX 197
           QARAVSTDGLRPSF+TINAVVYVVQI LWL+LWWKP+ V+VILSKMFFAGVS        
Sbjct: 144 QARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFL 203

Query: 198 XXXXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFDAFDKAADLDVLD 257
                     QRFPVESKGRRKKLQEVGYVTTICF+CFLIRC+MMCF AFD+ A+LDVLD
Sbjct: 204 LYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLD 263

Query: 258 HPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297
           HPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Sbjct: 264 HPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303


>AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/274 (76%), Positives = 227/274 (82%)

Query: 24  SSSSNWWRDINNSPLWQDRIFHVLAVLYGIVAAIALVQLVRIQLRVPEYGWTTQKVFHFL 83
               NWW D+N SP+WQDRIFHVLAVLYGIV+ IA++QLVRIQLRVPEYGWTTQKVFHFL
Sbjct: 20  KEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFL 79

Query: 84  NXXXXXXXXXXXXXXXXXQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVS 143
           N                 Q +QPEI+QHILLD+PSLAFFTTYALLVLFWAEIYYQARAVS
Sbjct: 80  NFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVS 139

Query: 144 TDGLRPSFYTINAVVYVVQIVLWLILWWKPISVLVILSKMFFAGVSXXXXXXXXXXXXXX 203
           TDGLRPSF+TINAVVYV+QI LWL+LWWKP+ ++VI+SKMFFAGVS              
Sbjct: 140 TDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRL 199

Query: 204 XXXXQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFDAFDKAADLDVLDHPILNF 263
               QRFPVESKGRRKKLQEVGYVTTICF+CFLIRC+MMCFDAFD AADLDVLDHPILNF
Sbjct: 200 FLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNF 259

Query: 264 IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297
           IYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Sbjct: 260 IYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293


>AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/274 (76%), Positives = 227/274 (82%)

Query: 24  SSSSNWWRDINNSPLWQDRIFHVLAVLYGIVAAIALVQLVRIQLRVPEYGWTTQKVFHFL 83
               NWW D+N SP+WQDRIFHVLAVLYGIV+ IA++QLVRIQLRVPEYGWTTQKVFHFL
Sbjct: 20  KEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFL 79

Query: 84  NXXXXXXXXXXXXXXXXXQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVS 143
           N                 Q +QPEI+QHILLD+PSLAFFTTYALLVLFWAEIYYQARAVS
Sbjct: 80  NFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVS 139

Query: 144 TDGLRPSFYTINAVVYVVQIVLWLILWWKPISVLVILSKMFFAGVSXXXXXXXXXXXXXX 203
           TDGLRPSF+TINAVVYV+QI LWL+LWWKP+ ++VI+SKMFFAGVS              
Sbjct: 140 TDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRL 199

Query: 204 XXXXQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFDAFDKAADLDVLDHPILNF 263
               QRFPVESKGRRKKLQEVGYVTTICF+CFLIRC+MMCFDAFD AADLDVLDHPILNF
Sbjct: 200 FLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNF 259

Query: 264 IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297
           IYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Sbjct: 260 IYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293


>AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication 1
           | chr4:11569924-11572163 FORWARD LENGTH=291
          Length = 291

 Score =  292 bits (748), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 142/275 (51%), Positives = 185/275 (67%)

Query: 23  SSSSSNWWRDINNSPLWQDRIFHVLAVLYGIVAAIALVQLVRIQLRVPEYGWTTQKVFHF 82
           +++ ++WW D+N S  WQD IF  L   Y +V+A+ALVQL+RIQ+RVPEYGWTTQKVFH 
Sbjct: 17  TTAITSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHL 76

Query: 83  LNXXXXXXXXXXXXXXXXXQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAV 142
           +N                   + P+ +  +LLD+P L FF+ Y LLVLFWAEIY+QAR++
Sbjct: 77  MNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSL 136

Query: 143 STDGLRPSFYTINAVVYVVQIVLWLILWWKPISVLVILSKMFFAGVSXXXXXXXXXXXXX 202
            TD LR ++ ++N  VY+ QI +W  +W    S + ++ K+F A VS             
Sbjct: 137 PTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGR 196

Query: 203 XXXXXQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFDAFDKAADLDVLDHPILN 262
                +RFP+ESKGRRKKL EVG VT ICF+CFLIRCV++   AFDK   LDVLDHP+LN
Sbjct: 197 LFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLN 256

Query: 263 FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297
            IYY++VE+LPS+LVLFILRKLPPKR   QYHPI+
Sbjct: 257 LIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291